MELO3C026277 (gene) Melon (DHL92) v4

Overview


Name	MELO3C026277
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Kinetochore protein SPC25
Location	chr02: 26197974 .. 26200577 (+)
RNA-Seq Expression	MELO3C026277
Synteny	MELO3C026277

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGTTAAAGCAAATTTGGCGGGCGAACGAGTGTACAGCAACTCCTTTGTTCTGTGGGAGAATGGAGATCAAGGCGACTGATTCTGTTCGTGCGAGGTTGGAAAAACTTCGAATCGTTCGTGAAAATGAAATTCCAGTTCAGCAGCAAAAGATGGAGTCCTTCGCGGATTCATTTTGCAAATCAGTGGAATCGATCAGTGTAAGGTCCCGAGCAAATGCCCTAAGTCAAGGTGAGCTATCTATTTTCTTCATTTTATTTGGGAAAGAAATGGGTGTGAAACTTGTTACTGTGGCCACTTACGACACTGTAATCGATATTAGAATGGTTTGTGAAGTGACCATTAGGGTTTTGAAATGGGTAGCGATTAAGACTCAGAATGGATGTAATTCTAGGTAATTGAGTTGGAGTTGGTTCAGAAGTGGCGAAGTTTACTTTGAAATTTCTTGTTTCGTTTTTTTGTTTTGTTTTTGTTTATATATATATTTTTAATTCTCAGGGAAACTGGGGGAACTAAAAGCGAGGCTGAGGGTGGCGGAAGATGAACTGGTTAAAGCTCTTGCAGGTATGAGCTATGATTACGCTACTTTCCTTCACCGCTGTATGAGTTAGAATATACTACTTCGTTGAAGATTGAATCGACTTTAAGTGGCATTTAAGAGTTGAGTTATTTTTCCACTAAATTGTCGAGGATCTTTTAACGGTAGTGTTTTGGATTTGGAGCGAGTGTTGGGCGAAATGTTGGTGTGTGTGATGCTGGTATATTGTTTCTTACTTAAAATTATTGCTCGTCGTATGGGCTTATTTCCTTTATACTTGCATATTTTTGTAGTGAAGACTCGTAAAGAGGCCAAACGCCTCACAATCATCGACTCCATTGCAACTTCAAAATCCAGAATAGAAGAACTCAGGAATACTTTACAAGACTGCAAAGCAAGGAGGGATGAATATGCTACAATTATATCTCAGCAATCCTTAGGTAATGTCTGTAAATCTTATTTTCTTTCAGACCCAATTTTCCTTTATGCAAATAGAAAACTGCACATGAACTGAAGGTAAGTTCATTGTTAACAAGTTGGATATGCATTGTTCAATCTTTATTTCCGCAATTCTTTTGCAAACTTCAACTTTAGAAGTTCCATGCGATAACTGATTACTTCTCTTTCTTTCCAATGCTATCAATAGTTTTATCTTCATCTGAACGCAAGGAAACCCAGGAGAGCGAGTGCAGAAATGAAATACAAGAGGCTATTTCTTGGTACAAAAGGGTTCTTGATTTTCATATTGAAGGAGGATATGGTATGATAATTCAAGTTTGTTTATGAAGAATCTCAACGGTTTTTGGGAAGCTTGAGATAAATTTGTTGACAACTTCTCTCGGCATTTCAGGGGTGAAATTCTCTTTCAAGAAAATAAATATAGACAATCCTGATGAAGAATATTCTTTTACGATCCGTCATGCAAATGATACTTATATGTGTAAGTTTTATCATATGTGCACTTAATATATGTTGATTTTTCTTGCTCATTATCTTCTGACAACCTGTATTTTTTTCTCTTGACTTTTTAGTGTTAGATTGTAACCCATCCTTGCCAGATATTAAGGAGTTGATACATGAATTAAATAAAACAAATGGTTTGTTCAAGCTCGTCAGGATCATGAGACGGAGATTCCAGGAGGCTGCAGCAGAAGGTGTGCCCTGAATTTTTAACTTTTTGCTTGAAAGGTATTTTTCCACTAAACGGTTGTTATATGTTTGCTATTTTCAACAGGATCTGGGGCTCCAGCATTGTCTCTGCATCAAGGTTCATCAATAATATCTACGTCAGCACCAGGCTTGTCATCATCAACTGAGAGAAGTGATTCTTCAACTGAAGAAATTAACATGGATGAAGTTGAGGAAACTAACAAACATTCTAAGAACATTTTACCCAGAAAGAAACCAGCTATCCACTCCAGTGGATCTGCTTTTTCTTTGCGTAGATCTCCTCGTTTTAAGGTATATTCAATTTTAATGTTTGATATCTGCTGCTTTTGATTTAGGATTCTTGAGTATATGATACTAAGAGAATACTATAAGTCTATAACTTCTATGTATAACAGGTTGATCTTTCTTTAAAGCACATTTCAAATTGTTGTGCAAAAGAGAATTACTAATAAAATGCACCTCGTATGGCAGGTCAGGAAATAAGATTGGAGGCTGTTAATGATTGAACAAGTATTAGGTTGATGGGCTCAGCCTTTTGCTTCCAAATTGCTTTGCAACTAACGTTGATTATGCCATTATGGGTCCTGATCTCTACATTTGCCAGAATTTCTCTGACTACTCTGAAGGGTCCATATCATACAAGTGAAGTTGAAGAAGGCTTTATCACATGACCTGTTGTATGTCCATGTATCTGATTTGTTTTTATGTGTATTATTTTACACGAAGTTATGGTTTTCATGTAATGCATGGGGGTGATTATCCCAAATGTACCGAATGCCAGTACTTTGTATCAATCTGATCTATATTCTAGGTTTCACATCATCGTACTTAAATTAAGGTTTGTGCAGTTTTAAATTAATTAATTGTGAAAGCTTGAAGGTGAAAGTTCACTTCTCT

mRNA sequence

AAGGTTAAAGCAAATTTGGCGGGCGAACGAGTGTACAGCAACTCCTTTGTTCTGTGGGAGAATGGAGATCAAGGCGACTGATTCTGTTCGTGCGAGGTTGGAAAAACTTCGAATCGTTCGTGAAAATGAAATTCCAGTTCAGCAGCAAAAGATGGAGTCCTTCGCGGATTCATTTTGCAAATCAGTGGAATCGATCAGTGTAAGGTCCCGAGCAAATGCCCTAAGTCAAGGGAAACTGGGGGAACTAAAAGCGAGGCTGAGGGTGGCGGAAGATGAACTGGTTAAAGCTCTTGCAGTGAAGACTCGTAAAGAGGCCAAACGCCTCACAATCATCGACTCCATTGCAACTTCAAAATCCAGAATAGAAGAACTCAGGAATACTTTACAAGACTGCAAAGCAAGGAGGGATGAATATGCTACAATTATATCTCAGCAATCCTTAGTTTTATCTTCATCTGAACGCAAGGAAACCCAGGAGAGCGAGTGCAGAAATGAAATACAAGAGGCTATTTCTTGGTACAAAAGGGTTCTTGATTTTCATATTGAAGGAGGATATGGGGTGAAATTCTCTTTCAAGAAAATAAATATAGACAATCCTGATGAAGAATATTCTTTTACGATCCGTCATGCAAATGATACTTATATGTTGTTAGATTGTAACCCATCCTTGCCAGATATTAAGGAGTTGATACATGAATTAAATAAAACAAATGGTTTGTTCAAGCTCGTCAGGATCATGAGACGGAGATTCCAGGAGGCTGCAGCAGAAGGATCTGGGGCTCCAGCATTGTCTCTGCATCAAGGTTCATCAATAATATCTACGTCAGCACCAGGCTTGTCATCATCAACTGAGAGAAGTGATTCTTCAACTGAAGAAATTAACATGGATGAAGTTGAGGAAACTAACAAACATTCTAAGAACATTTTACCCAGAAAGAAACCAGCTATCCACTCCAGTGGATCTGCTTTTTCTTTGCGTAGATCTCCTCGTTTTAAGGTCAGGAAATAAGATTGGAGGCTGTTAATGATTGAACAAGTATTAGGTTGATGGGCTCAGCCTTTTGCTTCCAAATTGCTTTGCAACTAACGTTGATTATGCCATTATGGGTCCTGATCTCTACATTTGCCAGAATTTCTCTGACTACTCTGAAGGGTCCATATCATACAAGTGAAGTTGAAGAAGGCTTTATCACATGACCTGTTGTATGTCCATGTATCTGATTTGTTTTTATGTGTATTATTTTACACGAAGTTATGGTTTTCATGTAATGCATGGGGGTGATTATCCCAAATGTACCGAATGCCAGTACTTTGTATCAATCTGATCTATATTCTAGGTTTCACATCATCGTACTTAAATTAAGGTTTGTGCAGTTTTAAATTAATTAATTGTGAAAGCTTGAAGGTGAAAGTTCACTTCTCT

Coding sequence (CDS)

ATGGAGATCAAGGCGACTGATTCTGTTCGTGCGAGGTTGGAAAAACTTCGAATCGTTCGTGAAAATGAAATTCCAGTTCAGCAGCAAAAGATGGAGTCCTTCGCGGATTCATTTTGCAAATCAGTGGAATCGATCAGTGTAAGGTCCCGAGCAAATGCCCTAAGTCAAGGGAAACTGGGGGAACTAAAAGCGAGGCTGAGGGTGGCGGAAGATGAACTGGTTAAAGCTCTTGCAGTGAAGACTCGTAAAGAGGCCAAACGCCTCACAATCATCGACTCCATTGCAACTTCAAAATCCAGAATAGAAGAACTCAGGAATACTTTACAAGACTGCAAAGCAAGGAGGGATGAATATGCTACAATTATATCTCAGCAATCCTTAGTTTTATCTTCATCTGAACGCAAGGAAACCCAGGAGAGCGAGTGCAGAAATGAAATACAAGAGGCTATTTCTTGGTACAAAAGGGTTCTTGATTTTCATATTGAAGGAGGATATGGGGTGAAATTCTCTTTCAAGAAAATAAATATAGACAATCCTGATGAAGAATATTCTTTTACGATCCGTCATGCAAATGATACTTATATGTTGTTAGATTGTAACCCATCCTTGCCAGATATTAAGGAGTTGATACATGAATTAAATAAAACAAATGGTTTGTTCAAGCTCGTCAGGATCATGAGACGGAGATTCCAGGAGGCTGCAGCAGAAGGATCTGGGGCTCCAGCATTGTCTCTGCATCAAGGTTCATCAATAATATCTACGTCAGCACCAGGCTTGTCATCATCAACTGAGAGAAGTGATTCTTCAACTGAAGAAATTAACATGGATGAAGTTGAGGAAACTAACAAACATTCTAAGAACATTTTACCCAGAAAGAAACCAGCTATCCACTCCAGTGGATCTGCTTTTTCTTTGCGTAGATCTCCTCGTTTTAAGGTCAGGAAATAA

Protein sequence

MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGKLGELKARLRVAEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGSSIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSPRFKVRK

Homology

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BLAST of MELO3C026277 vs. NCBI nr
Match: XP_008464538.1 (PREDICTED: probable kinetochore protein SPC25 [Cucumis melo])

HSP 1 Score: 586.3 bits (1510), Expect = 1.6e-163
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0


Query: 1   MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGKLG 60
           MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGKLG
Sbjct: 1   MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGKLG 60

Query: 61  ELKARLRVAEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT 120
           ELKARLRVAEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT
Sbjct: 61  ELKARLRVAEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT 120

Query: 121 IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180
           IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD
Sbjct: 121 IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180

Query: 181 EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGA 240
           EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGA
Sbjct: 181 EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGA 240

Query: 241 PALSLHQGSSIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSG 300
           PALSLHQGSSIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSG
Sbjct: 241 PALSLHQGSSIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSG 300

Query: 301 SAFSLRRSPRFKVRK 316
           SAFSLRRSPRFKVRK
Sbjct: 301 SAFSLRRSPRFKVRK 315

[Close]

BLAST of MELO3C026277 vs. NCBI nr
Match: TYJ98520.1 (putative kinetochore protein SPC25 [Cucumis melo var. makuwa])

HSP 1 Score: 558.9 bits (1439), Expect = 2.8e-155
Identity = 313/364 (85.99%), Postives = 313/364 (85.99%), Query Frame = 0


Query: 1   MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQG--- 60
           MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQG   
Sbjct: 1   MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGELS 60

Query: 61  ------------------------------------------------KLGELKARLRVA 120
                                                           KLGELKARLRVA
Sbjct: 61  IFFILFGKEMGVKLVTVATYDTVIDIRMVCEVTIRVLKWVAIKTQNGWKLGELKARLRVA 120

Query: 121 EDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVL 180
           EDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVL
Sbjct: 121 EDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVL 180

Query: 181 SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH 240
           SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH
Sbjct: 181 SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH 240

Query: 241 ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGS 300
           ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGS
Sbjct: 241 ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGS 300

Query: 301 SIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP 314
           SIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP
Sbjct: 301 SIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP 360

[Close]

BLAST of MELO3C026277 vs. NCBI nr
Match: KAA0057836.1 (putative kinetochore protein SPC25 [Cucumis melo var. makuwa])

HSP 1 Score: 557.4 bits (1435), Expect = 8.0e-155
Identity = 312/364 (85.71%), Postives = 312/364 (85.71%), Query Frame = 0


Query: 1   MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQG--- 60
           MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQG   
Sbjct: 1   MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGELS 60

Query: 61  ------------------------------------------------KLGELKARLRVA 120
                                                           KLGELKARLRVA
Sbjct: 61  IFFILFGKEMGVKLVTVATYDTVIDIRMVCEVTIRVLKWVAIKTQNGWKLGELKARLRVA 120

Query: 121 EDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVL 180
           EDELVK LAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVL
Sbjct: 121 EDELVKTLAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVL 180

Query: 181 SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH 240
           SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH
Sbjct: 181 SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH 240

Query: 241 ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGS 300
           ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGS
Sbjct: 241 ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGS 300

Query: 301 SIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP 314
           SIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP
Sbjct: 301 SIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP 360

[Close]

BLAST of MELO3C026277 vs. NCBI nr
Match: XP_004138099.1 (kinetochore protein SPC25 homolog [Cucumis sativus] >KGN63556.1 hypothetical protein Csa_014306 [Cucumis sativus])

HSP 1 Score: 554.7 bits (1428), Expect = 5.2e-154
Identity = 300/315 (95.24%), Postives = 305/315 (96.83%), Query Frame = 0


Query: 1   MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGKLG 60
           ME KA DSVRARLEKLRI+RENEIPVQQQKMESFADSF KSVESISVRSRANALSQGKLG
Sbjct: 1   MENKANDSVRARLEKLRILRENEIPVQQQKMESFADSFYKSVESISVRSRANALSQGKLG 60

Query: 61  ELKARLRVAEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT 120
           ELKARLR  EDELVKALAVKTRKEAKRLTIIDSIATSKSR EELRNTLQDCKARRDEYAT
Sbjct: 61  ELKARLRETEDELVKALAVKTRKEAKRLTIIDSIATSKSRTEELRNTLQDCKARRDEYAT 120

Query: 121 IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180
           IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD
Sbjct: 121 IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180

Query: 181 EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGA 240
           EEYSFTIRHANDTYMLLDCNPSL DIKELIHELNKTNGLFKLVRIMRRRFQEAAAEG+GA
Sbjct: 181 EEYSFTIRHANDTYMLLDCNPSLSDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGAGA 240

Query: 241 PALSLHQGSSIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSG 300
           PALSLHQGSS+ISTSAP LSSSTE S+SSTEEIN+DEVEETNKHSKNILPRK PAIHSSG
Sbjct: 241 PALSLHQGSSVISTSAPVLSSSTEGSESSTEEINIDEVEETNKHSKNILPRKNPAIHSSG 300

Query: 301 SAFSLRRSPRFKVRK 316
           SAFSLRRSPRFKVRK
Sbjct: 301 SAFSLRRSPRFKVRK 315

[Close]

BLAST of MELO3C026277 vs. NCBI nr
Match: XP_038880541.1 (kinetochore protein SPC25 homolog [Benincasa hispida])

HSP 1 Score: 509.6 bits (1311), Expect = 1.9e-140
Identity = 281/316 (88.92%), Postives = 293/316 (92.72%), Query Frame = 0


Query: 1   MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGKLG 60
           ME KA DSVRARLEKLRIVRE EIP QQQKMESF +SF KSVESI+VRSRANALSQGKLG
Sbjct: 1   MENKAKDSVRARLEKLRIVREKEIPFQQQKMESFVNSFYKSVESINVRSRANALSQGKLG 60

Query: 61  ELKARLRVAEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT 120
           ELKARLR AEDELVKALAVKTRKEAKRLTIIDS+ATSKSRIEELRNTLQD KARRDEY+T
Sbjct: 61  ELKARLREAEDELVKALAVKTRKEAKRLTIIDSLATSKSRIEELRNTLQDSKARRDEYST 120

Query: 121 IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180
           IIS+QSL LSSSERKE QESECR EIQEAISWYKRVLDFHIEGG+GVKFSFKKIN+ NPD
Sbjct: 121 IISRQSLALSSSERKEPQESECRKEIQEAISWYKRVLDFHIEGGHGVKFSFKKINVVNPD 180

Query: 181 EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGA 240
           EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAA+G  A
Sbjct: 181 EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAKGVEA 240

Query: 241 PALSLHQGSSIISTSAPGLSSSTERSDSSTEEIN-MDEVEETNKHSKNILPRKKPAIHSS 300
            ALSLHQGS II  SAPGLSSSTERS+SS+EEIN  DE+EETNKH+K ILP KKPAI SS
Sbjct: 241 QALSLHQGSMIIPMSAPGLSSSTERSESSSEEINKKDELEETNKHTKKILPGKKPAIKSS 300

Query: 301 GSAFSLRRSPRFKVRK 316
           GSAFSLRRSPRFKVRK
Sbjct: 301 GSAFSLRRSPRFKVRK 316

[Close]

BLAST of MELO3C026277 vs. ExPASy Swiss-Prot
Match: Q93VK9 (Kinetochore protein SPC25 homolog OS=Arabidopsis thaliana OX=3702 GN=SPC25 PE=1 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.2e-49
Identity = 131/314 (41.72%), Postives = 191/314 (60.83%), Query Frame = 0


Query: 3   IKATDSVRARLEKLRIVRENEIPVQQQKMESF-ADSFCKSVESISVRSRANALSQGKLGE 62
           I   D+ +  +  L ++ E +I  Q+ K++SF A  F +S+ S+  R++A A SQ +L  
Sbjct: 7   IAGGDTTKETMASLGLICEKDIHEQRLKIDSFIASPFRRSMNSLVERAQATAQSQVELMN 66

Query: 63  LKARLRVAEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATI 122
           LKA LR AEDELVK LAVKTRKEA+++ I DSI+ ++SRIE LR  LQ  K+++D+   I
Sbjct: 67  LKADLREAEDELVKVLAVKTRKEARQMGIRDSISATQSRIEVLRRNLQLQKSKKDDSVRI 126

Query: 123 ISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDE 182
           ISQQ   LS S+    + +E + +I EAISWY   L FH+E G+GVKF+F  I+   P  
Sbjct: 127 ISQQLQALSKSKDNAGKVTEDKADIHEAISWYNHALGFHVEAGHGVKFTFTNIDAKRPTR 186

Query: 183 EYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAP 242
           E+SFT+ + ND Y LLD +  L  I E++ ELNKTN LF+ VR+MR +F ++        
Sbjct: 187 EFSFTVHYGNDIYTLLDSDLQLDYINEMVQELNKTNDLFRFVRLMREQFLKSTLSELPTH 246

Query: 243 ALSLHQGSSIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGS 302
           +  L Q +S IS SAP +S ST+ ++ ST E    +V+   +  +      +  + +  S
Sbjct: 247 SGQLQQETSAISASAPAISFSTD-TNMSTPENKRSKVQVNRRQKRG----SESPLLAPVS 306

Query: 303 AFSLRRSPRFKVRK 316
             + RRS RFK +K
Sbjct: 307 TSATRRSSRFKGKK 315

[Close]

BLAST of MELO3C026277 vs. ExPASy TrEMBL
Match: A0A1S3CM71 (Kinetochore protein SPC25 OS=Cucumis melo OX=3656 GN=LOC103502389 PE=3 SV=1)

HSP 1 Score: 586.3 bits (1510), Expect = 7.8e-164
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0


Query: 1   MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGKLG 60
           MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGKLG
Sbjct: 1   MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGKLG 60

Query: 61  ELKARLRVAEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT 120
           ELKARLRVAEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT
Sbjct: 61  ELKARLRVAEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT 120

Query: 121 IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180
           IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD
Sbjct: 121 IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180

Query: 181 EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGA 240
           EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGA
Sbjct: 181 EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGA 240

Query: 241 PALSLHQGSSIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSG 300
           PALSLHQGSSIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSG
Sbjct: 241 PALSLHQGSSIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSG 300

Query: 301 SAFSLRRSPRFKVRK 316
           SAFSLRRSPRFKVRK
Sbjct: 301 SAFSLRRSPRFKVRK 315

[Close]

BLAST of MELO3C026277 vs. ExPASy TrEMBL
Match: A0A5D3BFE9 (Kinetochore protein SPC25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001250 PE=3 SV=1)

HSP 1 Score: 558.9 bits (1439), Expect = 1.3e-155
Identity = 313/364 (85.99%), Postives = 313/364 (85.99%), Query Frame = 0


Query: 1   MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQG--- 60
           MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQG   
Sbjct: 1   MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGELS 60

Query: 61  ------------------------------------------------KLGELKARLRVA 120
                                                           KLGELKARLRVA
Sbjct: 61  IFFILFGKEMGVKLVTVATYDTVIDIRMVCEVTIRVLKWVAIKTQNGWKLGELKARLRVA 120

Query: 121 EDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVL 180
           EDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVL
Sbjct: 121 EDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVL 180

Query: 181 SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH 240
           SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH
Sbjct: 181 SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH 240

Query: 241 ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGS 300
           ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGS
Sbjct: 241 ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGS 300

Query: 301 SIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP 314
           SIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP
Sbjct: 301 SIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP 360

[Close]

BLAST of MELO3C026277 vs. ExPASy TrEMBL
Match: A0A5A7UUK0 (Kinetochore protein SPC25 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001230 PE=3 SV=1)

HSP 1 Score: 557.4 bits (1435), Expect = 3.9e-155
Identity = 312/364 (85.71%), Postives = 312/364 (85.71%), Query Frame = 0


Query: 1   MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQG--- 60
           MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQG   
Sbjct: 1   MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGELS 60

Query: 61  ------------------------------------------------KLGELKARLRVA 120
                                                           KLGELKARLRVA
Sbjct: 61  IFFILFGKEMGVKLVTVATYDTVIDIRMVCEVTIRVLKWVAIKTQNGWKLGELKARLRVA 120

Query: 121 EDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVL 180
           EDELVK LAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVL
Sbjct: 121 EDELVKTLAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVL 180

Query: 181 SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH 240
           SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH
Sbjct: 181 SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH 240

Query: 241 ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGS 300
           ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGS
Sbjct: 241 ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGS 300

Query: 301 SIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP 314
           SIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP
Sbjct: 301 SIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP 360

[Close]

BLAST of MELO3C026277 vs. ExPASy TrEMBL
Match: A0A0A0LU84 (Kinetochore protein SPC25 OS=Cucumis sativus OX=3659 GN=Csa_1G004230 PE=3 SV=1)

HSP 1 Score: 554.7 bits (1428), Expect = 2.5e-154
Identity = 300/315 (95.24%), Postives = 305/315 (96.83%), Query Frame = 0


Query: 1   MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGKLG 60
           ME KA DSVRARLEKLRI+RENEIPVQQQKMESFADSF KSVESISVRSRANALSQGKLG
Sbjct: 1   MENKANDSVRARLEKLRILRENEIPVQQQKMESFADSFYKSVESISVRSRANALSQGKLG 60

Query: 61  ELKARLRVAEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT 120
           ELKARLR  EDELVKALAVKTRKEAKRLTIIDSIATSKSR EELRNTLQDCKARRDEYAT
Sbjct: 61  ELKARLRETEDELVKALAVKTRKEAKRLTIIDSIATSKSRTEELRNTLQDCKARRDEYAT 120

Query: 121 IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180
           IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD
Sbjct: 121 IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180

Query: 181 EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGA 240
           EEYSFTIRHANDTYMLLDCNPSL DIKELIHELNKTNGLFKLVRIMRRRFQEAAAEG+GA
Sbjct: 181 EEYSFTIRHANDTYMLLDCNPSLSDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGAGA 240

Query: 241 PALSLHQGSSIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSG 300
           PALSLHQGSS+ISTSAP LSSSTE S+SSTEEIN+DEVEETNKHSKNILPRK PAIHSSG
Sbjct: 241 PALSLHQGSSVISTSAPVLSSSTEGSESSTEEINIDEVEETNKHSKNILPRKNPAIHSSG 300

Query: 301 SAFSLRRSPRFKVRK 316
           SAFSLRRSPRFKVRK
Sbjct: 301 SAFSLRRSPRFKVRK 315

[Close]

BLAST of MELO3C026277 vs. ExPASy TrEMBL
Match: A0A6J1BYG5 (Kinetochore protein SPC25 OS=Momordica charantia OX=3673 GN=LOC111006883 PE=3 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 7.4e-130
Identity = 258/316 (81.65%), Postives = 282/316 (89.24%), Query Frame = 0


Query: 1   MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGKLG 60
           ME K  DS+R ++E LR+VRE EIPVQQQKMESFADSF KS+ESI+VRSR NALSQGKLG
Sbjct: 1   MENKVEDSIRVKMESLRMVREKEIPVQQQKMESFADSFRKSLESITVRSRENALSQGKLG 60

Query: 61  ELKARLRVAEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT 120
           ELKARLR AEDELVKALAVKTRKEAKRL I DS+A SKSRIEELRNTLQDCKA+RDEY+T
Sbjct: 61  ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAASKSRIEELRNTLQDCKAKRDEYST 120

Query: 121 IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180
           IISQQSL LSSSE KETQES+CR+EIQEAISWY RVLDFHIEGG GVKFSFKKINI+ PD
Sbjct: 121 IISQQSLALSSSEHKETQESDCRSEIQEAISWYNRVLDFHIEGGRGVKFSFKKININIPD 180

Query: 181 EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGA 240
           +EYSFTIRHA+DTY LLDCNPSL DI++LIHELNKTNGLFK VR+MR+RFQE AAEG GA
Sbjct: 181 KEYSFTIRHASDTYTLLDCNPSLQDIQDLIHELNKTNGLFKFVRVMRQRFQEIAAEGVGA 240

Query: 241 PALSLHQGSSIISTSAPGLSSSTERSDSSTEEI-NMDEVEETNKHSKNILPRKKPAIHSS 300
            ALSLHQ S+IIS SAPGLSSST+RS+SST+EI N   +EETNKHSK IL  KKPA+ S 
Sbjct: 241 QALSLHQDSTIISVSAPGLSSSTDRSESSTQEIDNQVRLEETNKHSKKILSGKKPAVLSP 300

Query: 301 GSAFSLRRSPRFKVRK 316
           GSAFSLRRSPRFKVRK
Sbjct: 301 GSAFSLRRSPRFKVRK 316

[Close]

BLAST of MELO3C026277 vs. TAIR 10
Match: AT3G48210.1 (CONTAINS InterPro DOMAIN/s: Kinetochore-Ndc80 complex, subunit Spc25 (InterPro:IPR013255); Has 194 Blast hits to 194 proteins in 72 species: Archae - 0; Bacteria - 4; Metazoa - 72; Fungi - 39; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). )

HSP 1 Score: 198.4 bits (503), Expect = 8.8e-51
Identity = 131/314 (41.72%), Postives = 191/314 (60.83%), Query Frame = 0


Query: 3   IKATDSVRARLEKLRIVRENEIPVQQQKMESF-ADSFCKSVESISVRSRANALSQGKLGE 62
           I   D+ +  +  L ++ E +I  Q+ K++SF A  F +S+ S+  R++A A SQ +L  
Sbjct: 7   IAGGDTTKETMASLGLICEKDIHEQRLKIDSFIASPFRRSMNSLVERAQATAQSQVELMN 66

Query: 63  LKARLRVAEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATI 122
           LKA LR AEDELVK LAVKTRKEA+++ I DSI+ ++SRIE LR  LQ  K+++D+   I
Sbjct: 67  LKADLREAEDELVKVLAVKTRKEARQMGIRDSISATQSRIEVLRRNLQLQKSKKDDSVRI 126

Query: 123 ISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDE 182
           ISQQ   LS S+    + +E + +I EAISWY   L FH+E G+GVKF+F  I+   P  
Sbjct: 127 ISQQLQALSKSKDNAGKVTEDKADIHEAISWYNHALGFHVEAGHGVKFTFTNIDAKRPTR 186

Query: 183 EYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAP 242
           E+SFT+ + ND Y LLD +  L  I E++ ELNKTN LF+ VR+MR +F ++        
Sbjct: 187 EFSFTVHYGNDIYTLLDSDLQLDYINEMVQELNKTNDLFRFVRLMREQFLKSTLSELPTH 246

Query: 243 ALSLHQGSSIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGS 302
           +  L Q +S IS SAP +S ST+ ++ ST E    +V+   +  +      +  + +  S
Sbjct: 247 SGQLQQETSAISASAPAISFSTD-TNMSTPENKRSKVQVNRRQKRG----SESPLLAPVS 306

Query: 303 AFSLRRSPRFKVRK 316
             + RRS RFK +K
Sbjct: 307 TSATRRSSRFKGKK 315

The following BLAST results are available for this feature:

BLAST of MELO3C026277 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464538.1	1.6e-163	100.00	PREDICTED: probable kinetochore protein SPC25 [Cucumis melo]	[more]
TYJ98520.1	2.8e-155	85.99	putative kinetochore protein SPC25 [Cucumis melo var. makuwa]	[more]
KAA0057836.1	8.0e-155	85.71	putative kinetochore protein SPC25 [Cucumis melo var. makuwa]	[more]
XP_004138099.1	5.2e-154	95.24	kinetochore protein SPC25 homolog [Cucumis sativus] >KGN63556.1 hypothetical pro...	[more]
XP_038880541.1	1.9e-140	88.92	kinetochore protein SPC25 homolog [Benincasa hispida]	[more]

BLAST of MELO3C026277 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93VK9	1.2e-49	41.72	Kinetochore protein SPC25 homolog OS=Arabidopsis thaliana OX=3702 GN=SPC25 PE=1 ...	[more]

BLAST of MELO3C026277 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CM71	7.8e-164	100.00	Kinetochore protein SPC25 OS=Cucumis melo OX=3656 GN=LOC103502389 PE=3 SV=1	[more]
A0A5D3BFE9	1.3e-155	85.99	Kinetochore protein SPC25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7UUK0	3.9e-155	85.71	Kinetochore protein SPC25 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A0A0LU84	2.5e-154	95.24	Kinetochore protein SPC25 OS=Cucumis sativus OX=3659 GN=Csa_1G004230 PE=3 SV=1	[more]
A0A6J1BYG5	7.4e-130	81.65	Kinetochore protein SPC25 OS=Momordica charantia OX=3673 GN=LOC111006883 PE=3 SV...	[more]

BLAST of MELO3C026277 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48210.1	8.8e-51	41.72	CONTAINS InterPro DOMAIN/s: Kinetochore-Ndc80 complex, subunit Spc25 (InterPro:I...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 59..79
None	No IPR available	COILS	Coil	Coil	coord: 94..121
None	No IPR available	GENE3D	3.30.457.50	Chromosome segregation protein Spc25	coord: 138..237 e-value: 5.4E-25 score: 89.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 269..287
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 253..268
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 253..315
None	No IPR available	PANTHER	PTHR14281:SF3	SUBFAMILY NOT NAMED	coord: 4..313
IPR013255	Chromosome segregation protein Spc25, C-terminal	PFAM	PF08234	Spindle_Spc25	coord: 166..231 e-value: 2.4E-20 score: 72.5
IPR045143	Kinetochore protein Spc25	PANTHER	PTHR14281	KINETOCHORE PROTEIN SPC25-RELATED	coord: 4..313

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C026277.1	MELO3C026277.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007059	chromosome segregation
cellular_component	GO:0031262	Ndc80 complex