MELO3C026202 (gene) Melon (DHL92) v4

Overview
NameMELO3C026202
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Descriptionmediator of RNA polymerase II transcription subunit 30
Locationchr02: 26666772 .. 26671032 (+)
RNA-Seq ExpressionMELO3C026202
SyntenyMELO3C026202
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTACTTTTATTTATTTATTTTTATTTTTTAAACTATGTTTTCTTTTTCTCTTTCTTTTCTTCTGGGATTTCTCGATTACTAATGAGAATTAGGGTTTCATGAATATCACAAACTCAAGTGTGATTGAAAGTTGGAATTGTGAATTTTGAAGATTCCGAACTCTCTCCTTGTAAATTCGGTGGATTTCCGAATGTAGTAGCATCACAGGAGCATCGATTTTTTCTTCTGGAAACGTATTATGGAAGAGAAATCCACTACTGTTTTGGCTCTTCCCCAGACAACTCAAGAGCTTGCAATGGAGGGCATCAAGCATCTTGAAGAAACCATTGAATCCGCTTTCCAGATCCTCTACTCCATGAATGACGAGCTCTGTAATCCCACATTATGGTCCACTACTTCTTCAACGGCAACCACGGCTACTTCTGGTTTAACAATTGCCAGTCCAAATGGTCCATCTTCGCATTCTGCTAATGGGGTTGTAAACGGTGATGCTAGTTCCGAAAGCACTAGCCATCACACCGATTCCAGCAGCGGCGGAGGCAGCGGTAGTGGGGGAGCCCTTGAGGAGGCACGTGTTCGCTACAAGAACTCAGTCCTTGCACTTCGTGCTATTCTTGCTGCAATCCCCAATTCTCAGAAGGTAAAATTACTGACTGATCTTCCATTTATTCATCTAGTTCATTAGCCAATGTTTATCATTTCGATTTTGATTTTTATCTGGGAAAATCGAGATCGATTTGGAGATATTGGGTTCTCCCCTATGGTACAAAATGCTTTAAATGTCGGAACATTGAATCTTCGTATTCATTTCTGACGAATTCCTAAAATTCTTCCCGAATTTGATAGATTGCAGATGCTATATTTGATCTGGTTTTCATTTCCACTATTGCTGATTGATGCCTGTACTTACTCCATGTACTAGTAATTTGATAGATTGCTAACTGCATTGACTTGTTCTTCACCTATGCTGATTCAATGATTTTAAGTAGAGCTTCGTGTTTATTGATAGGCAAAAGCATACGAATCGGGTACGAGTGCTCATGCATCGCCTGCAGACCAATCTGAAATTGATAAGTTGGAACAACACCTCTCTAATCTCAGAAAGGTATTTTTATTGTCTCTTTAGCTTGTGAATTCATGTCAGTAATTTATTTTTTCTTCGAGACATTTTGGATGTGCCTGAACACTTCGATGATTTCTGGAAATATTTACTTACTTATTAAGATTTTGGAGTCTACTTAGCTTCAACAACGCAGTATTGTCATTTTTCGATATATCTGTGTAGAATTTACATAAAAGTTAAAATATATACAATGAAACTGAGAAGGTAATGTCTTTAAAGATTTCAAGACAACAGTTCTGTTTTCTTCTTATTTGTTGTATCTCTATATCCAAGGAAAGATTTTGAAACTAAACGGACAATAGAGAAAATCAAATATTGAAACTTTATAATATTTTAGAGGATACATGATAGGTATTATCGATAGTATGCTTTTTCTTTCGTCTTATCCTTTAGCCTTTGTTAAGGTCCTAGAAATGACATTTTTTCCCTTCAACTTCAACTACTATCTTATAAGGGTCCTATCTTCTGTTTCCTTGCAGGAACTTGTCGTTAAAAATTTGCATATCAAGCTTCTGATAGATCAACTACGAGATCTTGTTGCTGATGTATCTACGTGGCAAAGTCCTTGTTCTGTGTGAAAAAACGTGCTCGCTTTGACTTTTGAGTCTCCTCGCTAAATGAGCTGTTGAAGTTTATAATTGCGATGCTCTGTTTCTTGAAAAGATGAGTTGTTATTAGAACGTTTGTTTGCATCTCTCTTCAATGAAAGTAGTGATTATACAAATTTGCCATTGTCCATAAATTGTCAATATAGAGTAAGGCTCTGATAAATCAAGTGCCAGAGGAATTAAAGGTTCAATTACGTGAGGTTTTTTCATACAAGTCATCTACAAAAACCCTCTAAACACTGTTAACACACACTTGGATGCACACAAAAACAACCATATAGCTTCAGCGTATGAAACATAGTTACACTTGCTTTCAACTTCTAAAATCTAGCTTGTAAGGAATGAGAATTTATGTGGCCGTATTAGGTTTTATACTCTCGAAGAATACAATCAGTTGTGGATTGATGATCTTGTAGTAAGGGAAGATCTCATATCCACAATGGCTGATTCATCTGCACCCAACTTGATGGCCTCTTTGCTTGCTCTGATGAACCTTGAAACAGCTCCTCTAGTGTAATCGTGTGCTTCTTTAACGGTCATCTTCTCGCTTATTTCATTAGGGAAACTACTCAGGAAATGATCACCATTTAGAACGGCAGCTAACTGTACTACCTCGCTCTGAAACTCAGATAATCCACTGTTTTCATTTGCTTCTGTTTTCCTCAAAGGTGTCACTTCAGGCAAAGTTACTGCAACAAGTGTTTGTGTAATTAACAACAAAACATAACTTCAATTGGGAAAATGTCATTGACGATACGATACCTGGACAGTCGGTTCGCGGCGAGGTTAACTGGTCAACAATGTCCTCAAATGTCCCAGCCCAAGCATCTCTGTGAGTGAGGAAGTTAGAGGGGATATTGAATATTTTCTTTATGGTAGCAGGGATTGAGGAATGCTCAAACTCAGAGTTTGGAGTTGGACCCTTTGGACTGCTTATTACTGCAAAACAAAACAGGAGTTTAGAGCTATAAACAAACCCCAGAAAAGGAAATAGCTAAACATTTATGGACAGTACTTCGCTTATGTTGTAAAAGGCTATTGATTCAGAGGAGAAGAGCGGGTGGCAAGAACTTGGCTTACCAGTTCCTTTCTTAATCCAAGGCGAGACCATAATTGTAGGCACGCGAACTCCAAGCCGATCGAACTTGAAGAAATAGGGAGCAGGGCCTGTGTTTCCATCCGGATTAGGGACATTAACGAAAGGAGTTTTTACATGGTCAAAAAATCCACCATGTTCGTCGTAAGTGATTATCAAAAGGGTTTCATTCCACTGGGGGCTAGCCCTAAGAGTCTCGTAAACCTCTTTCACCAGCTTCTGCCCATTTGCAACATCATGAGATGGATGATCATCATTTGCAGGCATTCCCACAAGATCAAAGTACCTTGGCTCAATCACAGTTAAGCTAGGAAGTTTCCCATTTCTAGCATCCTTTTTGAACTTCAAATCATACTGATGAAACTTGAAAATGTACTTCAATTTCCTCAGGTTTCTATAAAACAGAGTAGTGGGTATGTTCTGGAAGTAAATTCCAAAGTTGATACCATTCTCATGAAGTGAATCAAAAATGGTTTTCTGAGGATACCCCATTGCCAATTGCTTCTTCACATGGCTAGTTGAACCATGAGAAGTTGCTGAATAAACAAAGAGCCTATTGGGTTGAGTTGGGCCAGGAATTGATGAGAACCATCTATCGAACACTGCAAATTCACGAACTAAAGCTCCATAAATGGGTACAGCTTCAGGTTTAAAGCCTTTCATGACAGTTTCAGAGAGATTTGGTGACATTGAAAGAGCTTGTTCCACAAAGCCAGACATGGAAGGAATGGAATTAGAACCAAATACCTGCTGCAAAACGTCTTCAAATGAATGGCCCGGATCCGGATCTACAAACTCGGCATCATCAGTGAAACAAATCGTTTCAGGGTTAGGATTCTTGGTTGAAACAGGGTTGCATTCATCTCCAGTGACGCCATTGATTTTTGGGTTGACGTATTTCTTCATCCATCCAATCATGTGATCGAAGGAACGATTCTCCATTACCAAAACCACGACGGTTTTGATGGGTTGCTGCTGGAAACTGCGTTGAGGAAGCCATGAGAGAGTGAGAAGAAGGAAGAAAATGGAAGACAAATGAAATGGGAATTTGCTTTGCCGTCCGCTCATCGTGTTATCACTGCGAACAGAGTCGAGGAAAATAGAAGAAGAAGAAGATAAGTCTGCCAAATTTAGTGTGAGATTCCAAAAGAGAACTTAAAAATGAGGAAATTGGATTGTGGATGAGAATGTTACAGACAAATCCCACTTTAAAAAATGCAAAATCCTCTGGTTGTGACTAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGCTTAGAATGGAGTGAAGTGGAGAGAGAGAAGAGGAAGAAGCTTCCGGTCTTGCGCGTTTCAGAAACATTGCAATTAAAGTAAAGAATCAACAAAAGGGAAGCTGAAGCGCAAAAATTGAAAATTCACTCTTTTTTTTTCTTTATTATTGGAAACAACTGCCG

mRNA sequence

TTTACTTTTATTTATTTATTTTTATTTTTTAAACTATGTTTTCTTTTTCTCTTTCTTTTCTTCTGGGATTTCTCGATTACTAATGAGAATTAGGGTTTCATGAATATCACAAACTCAAGTGTGATTGAAAGTTGGAATTGTGAATTTTGAAGATTCCGAACTCTCTCCTTGTAAATTCGGTGGATTTCCGAATGTAGTAGCATCACAGGAGCATCGATTTTTTCTTCTGGAAACGTATTATGGAAGAGAAATCCACTACTGTTTTGGCTCTTCCCCAGACAACTCAAGAGCTTGCAATGGAGGGCATCAAGCATCTTGAAGAAACCATTGAATCCGCTTTCCAGATCCTCTACTCCATGAATGACGAGCTCTGTAATCCCACATTATGGTCCACTACTTCTTCAACGGCAACCACGGCTACTTCTGGTTTAACAATTGCCAGTCCAAATGGTCCATCTTCGCATTCTGCTAATGGGGTTGTAAACGGTGATGCTAGTTCCGAAAGCACTAGCCATCACACCGATTCCAGCAGCGGCGGAGGCAGCGGTAGTGGGGGAGCCCTTGAGGAGGCACGTGTTCGCTACAAGAACTCAGTCCTTGCACTTCGTGCTATTCTTGCTGCAATCCCCAATTCTCAGAAGGCAAAAGCATACGAATCGGGTACGAGTGCTCATGCATCGCCTGCAGACCAATCTGAAATTGATAAGTTGGAACAACACCTCTCTAATCTCAGAAAGGAACTTGTCGTTAAAAATTTGCATATCAAGCTTCTGATAGATCAACTACGAGATCTTGTTGCTGATGTATCTACGTGGCAAAGTCCTTGTTCTGTGTGAAAAAACGTGCTCGCTTTGACTTTTGAGTCTCCTCGCTAAATGAGCTGTTGAAGTTTATAATTGCGATGCTCTGTTTCTTGAAAAGATGAGTTGTTATTAGAACGTTTGTTTGCATCTCTCTTCAATGAAAGTAGTGATTATACAAATTTGCCATTGTCCATAAATTGTCAATATAGAGTAAGGCTCTGATAAATCAAGTGCCAGAGGAATTAAAGGTTCAATTACGTGAGGTTTTTTCATACAAGTCATCTACAAAAACCCTCTAAACACTGTTAACACACACTTGGATGCACACAAAAACAACCATATAGCTTCAGCGTATGAAACATAGTTACACTTGCTTTCAACTTCTAAAATCTAGCTTGTAAGGAATGAGAATTTATGTGGCCGTATTAGGTTTTATACTCTCGAAGAATACAATCAGTTGTGGATTGATGATCTTGTAGTAAGGGAAGATCTCATATCCACAATGGCTGATTCATCTGCACCCAACTTGATGGCCTCTTTGCTTGCTCTGATGAACCTTGAAACAGCTCCTCTAGTGTAATCGTGTGCTTCTTTAACGGTCATCTTCTCGCTTATTTCATTAGGGAAACTACTCAGGAAATGATCACCATTTAGAACGGCAGCTAACTGTACTACCTCGCTCTGAAACTCAGATAATCCACTGTTTTCATTTGCTTCTGTTTTCCTCAAAGGTGTCACTTCAGGCAAAGTTACTGCAACAAGTGTTTGTGTAATTAACAACAAAACATAACTTCAATTGGGAAAATGTCATTGACGATACGATACCTGGACAGTCGGTTCGCGGCGAGGTTAACTGGTCAACAATGTCCTCAAATGTCCCAGCCCAAGCATCTCTGTGAGTGAGGAAGTTAGAGGGGATATTGAATATTTTCTTTATGGTAGCAGGGATTGAGGAATGCTCAAACTCAGAGTTTGGAGTTGGACCCTTTGGACTGCTTATTACTGCAAAACAAAACAGGAGTTTAGAGCTATAAACAAACCCCAGAAAAGGAAATAGCTAAACATTTATGGACAGTACTTCGCTTATGTTGTAAAAGGCTATTGATTCAGAGGAGAAGAGCGGGTGGCAAGAACTTGGCTTACCAGTTCCTTTCTTAATCCAAGGCGAGACCATAATTGTAGGCACGCGAACTCCAAGCCGATCGAACTTGAAGAAATAGGGAGCAGGGCCTGTGTTTCCATCCGGATTAGGGACATTAACGAAAGGAGTTTTTACATGGTCAAAAAATCCACCATGTTCGTCGTAAGTGATTATCAAAAGGGTTTCATTCCACTGGGGGCTAGCCCTAAGAGTCTCGTAAACCTCTTTCACCAGCTTCTGCCCATTTGCAACATCATGAGATGGATGATCATCATTTGCAGGCATTCCCACAAGATCAAAGTACCTTGGCTCAATCACAGTTAAGCTAGGAAGTTTCCCATTTCTAGCATCCTTTTTGAACTTCAAATCATACTGATGAAACTTGAAAATGTACTTCAATTTCCTCAGGTTTCTATAAAACAGAGTAGTGGGTATGTTCTGGAAGTAAATTCCAAAGTTGATACCATTCTCATGAAGTGAATCAAAAATGGTTTTCTGAGGATACCCCATTGCCAATTGCTTCTTCACATGGCTAGTTGAACCATGAGAAGTTGCTGAATAAACAAAGAGCCTATTGGGTTGAGTTGGGCCAGGAATTGATGAGAACCATCTATCGAACACTGCAAATTCACGAACTAAAGCTCCATAAATGGGTACAGCTTCAGGTTTAAAGCCTTTCATGACAGTTTCAGAGAGATTTGGTGACATTGAAAGAGCTTGTTCCACAAAGCCAGACATGGAAGGAATGGAATTAGAACCAAATACCTGCTGCAAAACGTCTTCAAATGAATGGCCCGGATCCGGATCTACAAACTCGGCATCATCAGTGAAACAAATCGTTTCAGGGTTAGGATTCTTGGTTGAAACAGGGTTGCATTCATCTCCAGTGACGCCATTGATTTTTGGGTTGACGTATTTCTTCATCCATCCAATCATGTGATCGAAGGAACGATTCTCCATTACCAAAACCACGACGGTTTTGATGGGTTGCTGCTGGAAACTGCGTTGAGGAAGCCATGAGAGAGTGAGAAGAAGGAAGAAAATGGAAGACAAATGAAATGGGAATTTGCTTTGCCGTCCGCTCATCGTGTTATCACTGCGAACAGAGTCGAGGAAAATAGAAGAAGAAGAAGATAAGTCTGCCAAATTTAGTGTGAGATTCCAAAAGAGAACTTAAAAATGAGGAAATTGGATTGTGGATGAGAATGTTACAGACAAATCCCACTTTAAAAAATGCAAAATCCTCTGGTTGTGACTAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGCTTAGAATGGAGTGAAGTGGAGAGAGAGAAGAGGAAGAAGCTTCCGGTCTTGCGCGTTTCAGAAACATTGCAATTAAAGTAAAGAATCAACAAAAGGGAAGCTGAAGCGCAAAAATTGAAAATTCACTCTTTTTTTTTCTTTATTATTGGAAACAACTGCCG

Coding sequence (CDS)

ATGGAAGAGAAATCCACTACTGTTTTGGCTCTTCCCCAGACAACTCAAGAGCTTGCAATGGAGGGCATCAAGCATCTTGAAGAAACCATTGAATCCGCTTTCCAGATCCTCTACTCCATGAATGACGAGCTCTGTAATCCCACATTATGGTCCACTACTTCTTCAACGGCAACCACGGCTACTTCTGGTTTAACAATTGCCAGTCCAAATGGTCCATCTTCGCATTCTGCTAATGGGGTTGTAAACGGTGATGCTAGTTCCGAAAGCACTAGCCATCACACCGATTCCAGCAGCGGCGGAGGCAGCGGTAGTGGGGGAGCCCTTGAGGAGGCACGTGTTCGCTACAAGAACTCAGTCCTTGCACTTCGTGCTATTCTTGCTGCAATCCCCAATTCTCAGAAGGCAAAAGCATACGAATCGGGTACGAGTGCTCATGCATCGCCTGCAGACCAATCTGAAATTGATAAGTTGGAACAACACCTCTCTAATCTCAGAAAGGAACTTGTCGTTAAAAATTTGCATATCAAGCTTCTGATAGATCAACTACGAGATCTTGTTGCTGATGTATCTACGTGGCAAAGTCCTTGTTCTGTGTGA

Protein sequence

MEEKSTTVLALPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATTATSGLTIASPNGPSSHSANGVVNGDASSESTSHHTDSSSGGGSGSGGALEEARVRYKNSVLALRAILAAIPNSQKAKAYESGTSAHASPADQSEIDKLEQHLSNLRKELVVKNLHIKLLIDQLRDLVADVSTWQSPCSV
Homology
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BLAST of MELO3C026202 vs. NCBI nr
Match: XP_008464424.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 30 [Cucumis melo] >KAA0057767.1 mediator of RNA polymerase II transcription subunit 30 [Cucumis melo var. makuwa] >TYJ98448.1 mediator of RNA polymerase II transcription subunit 30 [Cucumis melo var. makuwa])

HSP 1 Score: 363.6 bits (932), Expect = 1.1e-96
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0 

Query: 1   MEEKSTTVLALPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATTA 60
           MEEKSTTVLALPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATTA
Sbjct: 1   MEEKSTTVLALPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATTA 60

Query: 61  TSGLTIASPNGPSSHSANGVVNGDASSESTSHHTDSSSGGGSGSGGALEEARVRYKNSVL 120
           TSGLTIASPNGPSSHSANGVVNGDASSESTSHHTDSSSGGGSGSGGALEEARVRYKNSVL
Sbjct: 61  TSGLTIASPNGPSSHSANGVVNGDASSESTSHHTDSSSGGGSGSGGALEEARVRYKNSVL 120

Query: 121 ALRAILAAIPNSQKAKAYESGTSAHASPADQSEIDKLEQHLSNLRKELVVKNLHIKLLID 180
           ALRAILAAIPNSQKAKAYESGTSAHASPADQSEIDKLEQHLSNLRKELVVKNLHIKLLID
Sbjct: 121 ALRAILAAIPNSQKAKAYESGTSAHASPADQSEIDKLEQHLSNLRKELVVKNLHIKLLID 180

Query: 181 QLRDLVADVSTWQSPCSV 199
           QLRDLVADVSTWQSPCSV
Sbjct: 181 QLRDLVADVSTWQSPCSV 198

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BLAST of MELO3C026202 vs. NCBI nr
Match: XP_004138044.1 (mediator of RNA polymerase II transcription subunit 30 [Cucumis sativus] >KGN63478.1 hypothetical protein Csa_013518 [Cucumis sativus])

HSP 1 Score: 356.7 bits (914), Expect = 1.3e-94
Identity = 194/198 (97.98%), Postives = 195/198 (98.48%), Query Frame = 0 

Query: 1   MEEKSTTVLALPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATTA 60
           MEEKST VLALPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATTA
Sbjct: 1   MEEKSTNVLALPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATTA 60

Query: 61  TSGLTIASPNGPSSHSANGVVNGDASSESTSHHTDSSSGGGSGSGGALEEARVRYKNSVL 120
           TSGLTIASP+GPSSHSANGVVNGDASSESTSHHTDSS GGGSGSGGALEEARVRYKNSVL
Sbjct: 61  TSGLTIASPSGPSSHSANGVVNGDASSESTSHHTDSSGGGGSGSGGALEEARVRYKNSVL 120

Query: 121 ALRAILAAIPNSQKAKAYESGTSAHASPADQSEIDKLEQHLSNLRKELVVKNLHIKLLID 180
           ALRAILAAIPNSQKAKAYESGTS HASPADQSEIDKLEQHLSNLRKELVVKNLHIKLLID
Sbjct: 121 ALRAILAAIPNSQKAKAYESGTSGHASPADQSEIDKLEQHLSNLRKELVVKNLHIKLLID 180

Query: 181 QLRDLVADVSTWQSPCSV 199
           QLRDLVADVSTWQSPCSV
Sbjct: 181 QLRDLVADVSTWQSPCSV 198

[Close]
BLAST of MELO3C026202 vs. NCBI nr
Match: XP_022921424.1 (mediator of RNA polymerase II transcription subunit 30 [Cucurbita moschata] >XP_022987135.1 mediator of RNA polymerase II transcription subunit 30 [Cucurbita maxima] >XP_023515464.1 mediator of RNA polymerase II transcription subunit 30 [Cucurbita pepo subsp. pepo] >KAG6589379.1 Mediator of RNA polymerase II transcription subunit 30, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023058.1 Mediator of RNA polymerase II transcription subunit 30 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 344.7 bits (883), Expect = 5.1e-91
Identity = 186/198 (93.94%), Postives = 192/198 (96.97%), Query Frame = 0 

Query: 1   MEEKSTTVLALPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATTA 60
           MEEK T VL+LPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATT 
Sbjct: 1   MEEKPTNVLSLPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATTT 60

Query: 61  TSGLTIASPNGPSSHSANGVVNGDASSESTSHHTDSSSGGGSGSGGALEEARVRYKNSVL 120
           TSGLTIASPN PSSHS NGVVNGDASSEST+HHTD+SSGGGSGSGGALEEARVRYKNSVL
Sbjct: 61  TSGLTIASPNAPSSHSTNGVVNGDASSESTNHHTDTSSGGGSGSGGALEEARVRYKNSVL 120

Query: 121 ALRAILAAIPNSQKAKAYESGTSAHASPADQSEIDKLEQHLSNLRKELVVKNLHIKLLID 180
           ALRAILAAIPNSQKAKA+ESGTS HASPADQSEIDKLEQHLSNLRKEL+VKNLHIKLLID
Sbjct: 121 ALRAILAAIPNSQKAKAHESGTSGHASPADQSEIDKLEQHLSNLRKELMVKNLHIKLLID 180

Query: 181 QLRDLVADVSTWQSPCSV 199
           QLR+LVADVSTWQSPCSV
Sbjct: 181 QLRELVADVSTWQSPCSV 198

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BLAST of MELO3C026202 vs. NCBI nr
Match: XP_038879540.1 (mediator of RNA polymerase II transcription subunit 30 [Benincasa hispida])

HSP 1 Score: 339.7 bits (870), Expect = 1.7e-89
Identity = 188/198 (94.95%), Postives = 189/198 (95.45%), Query Frame = 0 

Query: 1   MEEKSTTVLALPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATTA 60
           MEEK T VLALPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSST TTA
Sbjct: 2   MEEKPTNVLALPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTVTTA 61

Query: 61  TSGLTIASPNGPSSHSANGVVNGDASSESTSHHTDSSSGGGSGSGGALEEARVRYKNSVL 120
           TSGL IASPNGPSSHS NGVVNGDASSESTSHHTDSSSGGGSGSGGALEEARVRYKNSVL
Sbjct: 62  TSGLAIASPNGPSSHSVNGVVNGDASSESTSHHTDSSSGGGSGSGGALEEARVRYKNSVL 121

Query: 121 ALRAILAAIPNSQKAKAYESGTSAHASPADQSEIDKLEQHLSNLRKELVVKNLHIKLLID 180
           ALRAILAAIPNSQKA AYESGTS   SPADQSEIDKLEQHLS+LRKELVVKNLHIKLLID
Sbjct: 122 ALRAILAAIPNSQKATAYESGTS--GSPADQSEIDKLEQHLSSLRKELVVKNLHIKLLID 181

Query: 181 QLRDLVADVSTWQSPCSV 199
           QLRDLVADVSTWQSPCSV
Sbjct: 182 QLRDLVADVSTWQSPCSV 197

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BLAST of MELO3C026202 vs. NCBI nr
Match: XP_022134927.1 (mediator of RNA polymerase II transcription subunit 30 [Momordica charantia])

HSP 1 Score: 322.0 bits (824), Expect = 3.6e-84
Identity = 174/198 (87.88%), Postives = 186/198 (93.94%), Query Frame = 0 

Query: 1   MEEKSTTVLALPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATTA 60
           ME+K T++LALPQTTQELA+EGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTAT+A
Sbjct: 1   MEDKPTSILALPQTTQELAIEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATSA 60

Query: 61  TSGLTIASPNGPSSHSANGVVNGDASSESTSHHTDSSSGGGSGSGGALEEARVRYKNSVL 120
              L+IASPNGPS HS NGVVNGDASSEST+HH D+SSGGG+GSGGALEEARVRY NSVL
Sbjct: 61  ---LSIASPNGPSPHSTNGVVNGDASSESTNHHADTSSGGGTGSGGALEEARVRYNNSVL 120

Query: 121 ALRAILAAIPNSQKAKAYESGTSAHASPADQSEIDKLEQHLSNLRKELVVKNLHIKLLID 180
           ALRAILAAIP+SQ AKAYESGTS HASPADQSEIDKLEQHL NLRKELV KNLH+KLLID
Sbjct: 121 ALRAILAAIPSSQNAKAYESGTSGHASPADQSEIDKLEQHLCNLRKELVNKNLHLKLLID 180

Query: 181 QLRDLVADVSTWQSPCSV 199
           QLRDLVAD+STWQSPCSV
Sbjct: 181 QLRDLVADISTWQSPCSV 195

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BLAST of MELO3C026202 vs. ExPASy Swiss-Prot
Match: Q9FMV4 (Mediator of RNA polymerase II transcription subunit 30 OS=Arabidopsis thaliana OX=3702 GN=MED30 PE=1 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.4e-43
Identity = 106/187 (56.68%), Postives = 136/187 (72.73%), Query Frame = 0 

Query: 14  TTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATTATSGLTIASPNGPS 73
           TTQELAMEG K LEETIE+AFQI+ +MNDELCNP+LWST++    T +S  T    NG +
Sbjct: 13  TTQELAMEGEKQLEETIEAAFQIISAMNDELCNPSLWSTSA----TPSSAATTTGSNGSA 72

Query: 74  SHSANGVVNGDASSESTSHHTDSSSGGGSGSGG--ALEEARVRYKNSVLALRAILAAIPN 133
             SA+      A+ + TSHH++S+ GGG G  G   L+EA +RYKNSV +LRA+LAAIPN
Sbjct: 73  LVSADA-----AAIDGTSHHSESAGGGGGGGSGNSVLDEASLRYKNSVTSLRAVLAAIPN 132

Query: 134 SQKAKAYESGTSAHASPADQSEIDKLEQHLSNLRKELVVKNLHIKLLIDQLRDLVADVST 193
           SQKAKA E   +   SP  + EI+KLE+   +LR E+  KN+H+K LID+LR+L+AD+ST
Sbjct: 133 SQKAKASEM-QNGLGSPESEDEIEKLEEQALSLRMEIAKKNVHVKELIDKLRELIADIST 189

Query: 194 WQSPCSV 199
           WQSPCSV
Sbjct: 193 WQSPCSV 189

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BLAST of MELO3C026202 vs. ExPASy TrEMBL
Match: A0A5A7USU3 (Mediator of RNA polymerase II transcription subunit 30 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00490 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 5.2e-97
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0 

Query: 1   MEEKSTTVLALPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATTA 60
           MEEKSTTVLALPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATTA
Sbjct: 1   MEEKSTTVLALPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATTA 60

Query: 61  TSGLTIASPNGPSSHSANGVVNGDASSESTSHHTDSSSGGGSGSGGALEEARVRYKNSVL 120
           TSGLTIASPNGPSSHSANGVVNGDASSESTSHHTDSSSGGGSGSGGALEEARVRYKNSVL
Sbjct: 61  TSGLTIASPNGPSSHSANGVVNGDASSESTSHHTDSSSGGGSGSGGALEEARVRYKNSVL 120

Query: 121 ALRAILAAIPNSQKAKAYESGTSAHASPADQSEIDKLEQHLSNLRKELVVKNLHIKLLID 180
           ALRAILAAIPNSQKAKAYESGTSAHASPADQSEIDKLEQHLSNLRKELVVKNLHIKLLID
Sbjct: 121 ALRAILAAIPNSQKAKAYESGTSAHASPADQSEIDKLEQHLSNLRKELVVKNLHIKLLID 180

Query: 181 QLRDLVADVSTWQSPCSV 199
           QLRDLVADVSTWQSPCSV
Sbjct: 181 QLRDLVADVSTWQSPCSV 198

[Close]
BLAST of MELO3C026202 vs. ExPASy TrEMBL
Match: A0A1S3CMZ7 (mediator of RNA polymerase II transcription subunit 30 OS=Cucumis melo OX=3656 GN=LOC103502315 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 5.2e-97
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0 

Query: 1   MEEKSTTVLALPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATTA 60
           MEEKSTTVLALPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATTA
Sbjct: 1   MEEKSTTVLALPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATTA 60

Query: 61  TSGLTIASPNGPSSHSANGVVNGDASSESTSHHTDSSSGGGSGSGGALEEARVRYKNSVL 120
           TSGLTIASPNGPSSHSANGVVNGDASSESTSHHTDSSSGGGSGSGGALEEARVRYKNSVL
Sbjct: 61  TSGLTIASPNGPSSHSANGVVNGDASSESTSHHTDSSSGGGSGSGGALEEARVRYKNSVL 120

Query: 121 ALRAILAAIPNSQKAKAYESGTSAHASPADQSEIDKLEQHLSNLRKELVVKNLHIKLLID 180
           ALRAILAAIPNSQKAKAYESGTSAHASPADQSEIDKLEQHLSNLRKELVVKNLHIKLLID
Sbjct: 121 ALRAILAAIPNSQKAKAYESGTSAHASPADQSEIDKLEQHLSNLRKELVVKNLHIKLLID 180

Query: 181 QLRDLVADVSTWQSPCSV 199
           QLRDLVADVSTWQSPCSV
Sbjct: 181 QLRDLVADVSTWQSPCSV 198

[Close]
BLAST of MELO3C026202 vs. ExPASy TrEMBL
Match: A0A0A0LNW4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G001500 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 6.3e-95
Identity = 194/198 (97.98%), Postives = 195/198 (98.48%), Query Frame = 0 

Query: 1   MEEKSTTVLALPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATTA 60
           MEEKST VLALPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATTA
Sbjct: 1   MEEKSTNVLALPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATTA 60

Query: 61  TSGLTIASPNGPSSHSANGVVNGDASSESTSHHTDSSSGGGSGSGGALEEARVRYKNSVL 120
           TSGLTIASP+GPSSHSANGVVNGDASSESTSHHTDSS GGGSGSGGALEEARVRYKNSVL
Sbjct: 61  TSGLTIASPSGPSSHSANGVVNGDASSESTSHHTDSSGGGGSGSGGALEEARVRYKNSVL 120

Query: 121 ALRAILAAIPNSQKAKAYESGTSAHASPADQSEIDKLEQHLSNLRKELVVKNLHIKLLID 180
           ALRAILAAIPNSQKAKAYESGTS HASPADQSEIDKLEQHLSNLRKELVVKNLHIKLLID
Sbjct: 121 ALRAILAAIPNSQKAKAYESGTSGHASPADQSEIDKLEQHLSNLRKELVVKNLHIKLLID 180

Query: 181 QLRDLVADVSTWQSPCSV 199
           QLRDLVADVSTWQSPCSV
Sbjct: 181 QLRDLVADVSTWQSPCSV 198

[Close]
BLAST of MELO3C026202 vs. ExPASy TrEMBL
Match: A0A6J1JFZ2 (mediator of RNA polymerase II transcription subunit 30 OS=Cucurbita maxima OX=3661 GN=LOC111484777 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.5e-91
Identity = 186/198 (93.94%), Postives = 192/198 (96.97%), Query Frame = 0 

Query: 1   MEEKSTTVLALPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATTA 60
           MEEK T VL+LPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATT 
Sbjct: 1   MEEKPTNVLSLPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATTT 60

Query: 61  TSGLTIASPNGPSSHSANGVVNGDASSESTSHHTDSSSGGGSGSGGALEEARVRYKNSVL 120
           TSGLTIASPN PSSHS NGVVNGDASSEST+HHTD+SSGGGSGSGGALEEARVRYKNSVL
Sbjct: 61  TSGLTIASPNAPSSHSTNGVVNGDASSESTNHHTDTSSGGGSGSGGALEEARVRYKNSVL 120

Query: 121 ALRAILAAIPNSQKAKAYESGTSAHASPADQSEIDKLEQHLSNLRKELVVKNLHIKLLID 180
           ALRAILAAIPNSQKAKA+ESGTS HASPADQSEIDKLEQHLSNLRKEL+VKNLHIKLLID
Sbjct: 121 ALRAILAAIPNSQKAKAHESGTSGHASPADQSEIDKLEQHLSNLRKELMVKNLHIKLLID 180

Query: 181 QLRDLVADVSTWQSPCSV 199
           QLR+LVADVSTWQSPCSV
Sbjct: 181 QLRELVADVSTWQSPCSV 198

[Close]
BLAST of MELO3C026202 vs. ExPASy TrEMBL
Match: A0A6J1E0F5 (mediator of RNA polymerase II transcription subunit 30 OS=Cucurbita moschata OX=3662 GN=LOC111429707 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.5e-91
Identity = 186/198 (93.94%), Postives = 192/198 (96.97%), Query Frame = 0 

Query: 1   MEEKSTTVLALPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATTA 60
           MEEK T VL+LPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATT 
Sbjct: 1   MEEKPTNVLSLPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATTT 60

Query: 61  TSGLTIASPNGPSSHSANGVVNGDASSESTSHHTDSSSGGGSGSGGALEEARVRYKNSVL 120
           TSGLTIASPN PSSHS NGVVNGDASSEST+HHTD+SSGGGSGSGGALEEARVRYKNSVL
Sbjct: 61  TSGLTIASPNAPSSHSTNGVVNGDASSESTNHHTDTSSGGGSGSGGALEEARVRYKNSVL 120

Query: 121 ALRAILAAIPNSQKAKAYESGTSAHASPADQSEIDKLEQHLSNLRKELVVKNLHIKLLID 180
           ALRAILAAIPNSQKAKA+ESGTS HASPADQSEIDKLEQHLSNLRKEL+VKNLHIKLLID
Sbjct: 121 ALRAILAAIPNSQKAKAHESGTSGHASPADQSEIDKLEQHLSNLRKELMVKNLHIKLLID 180

Query: 181 QLRDLVADVSTWQSPCSV 199
           QLR+LVADVSTWQSPCSV
Sbjct: 181 QLRELVADVSTWQSPCSV 198

[Close]
BLAST of MELO3C026202 vs. TAIR 10
Match: AT5G63480.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 177.6 bits (449), Expect = 1.0e-44
Identity = 106/187 (56.68%), Postives = 136/187 (72.73%), Query Frame = 0 

Query: 14  TTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATTATSGLTIASPNGPS 73
           TTQELAMEG K LEETIE+AFQI+ +MNDELCNP+LWST++    T +S  T    NG +
Sbjct: 13  TTQELAMEGEKQLEETIEAAFQIISAMNDELCNPSLWSTSA----TPSSAATTTGSNGSA 72

Query: 74  SHSANGVVNGDASSESTSHHTDSSSGGGSGSGG--ALEEARVRYKNSVLALRAILAAIPN 133
             SA+      A+ + TSHH++S+ GGG G  G   L+EA +RYKNSV +LRA+LAAIPN
Sbjct: 73  LVSADA-----AAIDGTSHHSESAGGGGGGGSGNSVLDEASLRYKNSVTSLRAVLAAIPN 132

Query: 134 SQKAKAYESGTSAHASPADQSEIDKLEQHLSNLRKELVVKNLHIKLLIDQLRDLVADVST 193
           SQKAKA E   +   SP  + EI+KLE+   +LR E+  KN+H+K LID+LR+L+AD+ST
Sbjct: 133 SQKAKASEM-QNGLGSPESEDEIEKLEEQALSLRMEIAKKNVHVKELIDKLRELIADIST 189

Query: 194 WQSPCSV 199
           WQSPCSV
Sbjct: 193 WQSPCSV 189

The following BLAST results are available for this feature:
BLAST of MELO3C026202 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008464424.11.1e-96100.00PREDICTED: mediator of RNA polymerase II transcription subunit 30 [Cucumis melo]... [more]
XP_004138044.11.3e-9497.98mediator of RNA polymerase II transcription subunit 30 [Cucumis sativus] >KGN634... [more]
XP_022921424.15.1e-9193.94mediator of RNA polymerase II transcription subunit 30 [Cucurbita moschata] >XP_... [more]
XP_038879540.11.7e-8994.95mediator of RNA polymerase II transcription subunit 30 [Benincasa hispida][more]
XP_022134927.13.6e-8487.88mediator of RNA polymerase II transcription subunit 30 [Momordica charantia][more]
BLAST of MELO3C026202 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FMV41.4e-4356.68Mediator of RNA polymerase II transcription subunit 30 OS=Arabidopsis thaliana O... [more]
BLAST of MELO3C026202 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7USU35.2e-97100.00Mediator of RNA polymerase II transcription subunit 30 OS=Cucumis melo var. maku... [more]
A0A1S3CMZ75.2e-97100.00mediator of RNA polymerase II transcription subunit 30 OS=Cucumis melo OX=3656 G... [more]
A0A0A0LNW46.3e-9597.98Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G001500 PE=4 SV=1[more]
A0A6J1JFZ22.5e-9193.94mediator of RNA polymerase II transcription subunit 30 OS=Cucurbita maxima OX=36... [more]
A0A6J1E0F52.5e-9193.94mediator of RNA polymerase II transcription subunit 30 OS=Cucurbita moschata OX=... [more]
BLAST of MELO3C026202 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G63480.11.0e-4456.68unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 154..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..103
NoneNo IPR availablePANTHERPTHR36406:SF2MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 30coord: 7..198
IPR034568Mediator of RNA polymerase II transcription subunit 30PANTHERPTHR36406MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 30coord: 7..198

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C026202.1MELO3C026202.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016592 mediator complex