MELO3C026109 (gene) Melon (DHL92) v4

Overview


Name	MELO3C026109
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	PsbP domain-containing protein
Location	chr12: 13929931 .. 13932163 (-)
RNA-Seq Expression	MELO3C026109
Synteny	MELO3C026109

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAATCTGAAACACAAAGTTAGTGTTTCCCTTTCTCTAGATTCCTCAAAAATGGCCGTAATCCTCCACTCCTTCCTACCTTCAATTCAAACACTCACTTCTCCAATTCGCCAAAGGATTCCCAGCACTTCTTCTACGCGGTCGCCTATCATTTCATTCCCCAAATGTTGTTCTCAATCTCAATCGGTAATTCTTCACAATCTCTAATCATTCTGGAACTTGCTACCTACTTCCATTTATCGTTACCGCTACCTTTCTAATATATAATCAGATTAAAGACGTTGCAGTTCCAAGGAGGAATGCAATGGCGTTGATTTTGTCCACTTGTATTTTCTCTAATTCTGCTTTCGCTGTGCCTTCCGTTGGGTTATTGGAATACATTGACACTTTTGATGGGTATTCCTTCAAATACCCAAAGAATTGGATTCAAGTTCGAGGGGCGGGGGCTGACATTTTCTTCAGGGATCCCTTTGTTCTTGATGAGAATCTTTCGGTGGAGTTCTCGTCGCCGTCTTCATCTAGGTATAACAGCGTTCAGGATTTGGGACCTCCTGAAGAAGCTGGGAAGAAAGTGCTGAAGCAGTATTTGACAGAGTTCATGTCCACAAGGCTTGGAGTTAGAAGGGAATCCAACATTCTTTCTACTTCTTCCAGAATGGCTGATGATGGCAGAACTTACTACCAAGTTGAGGTAATTTGCTTCTACACTTATCCTTTCCTCCTTCAATTCTCTCCATTTTGCTCAACAACTCCTCCTTTTATCTTTGCTTATCATATTCAAAATGTTGGCGAATTGTCAAATAGGTTTCTAATTAATTAATTTTGTAAACTTGATCGACATGTTGAAACCTACCGAATACAAAGTTGGAAGTTTAACGGCCTAACCGATATCTTTTAAATTTCGATGAACAAAATGAAACTTGTAATCTCACCTTTTGAAAACCTCTTCTAATTTTCTAAACAAAAGTTGTGTTTGGTCAAGTGTAATGGCTTCTCTCAAACAAACATTTCCAGTGTTTTCAACAGCAGAAAAGCTTAGTAACAAACAACGGAAAACCATAATGTTGTAAGAGTAACACTCCAAAGATTGCTGTGATTCGTGGCATTCTAGTTTTCGTTATATATATGTATGTGATGTAGTTTGTATAATACACGTACCTTTTGAAATTTCATAGTGCAATGCTTAACGCATTTAACATTAATAATGTAATGTCCTGACTTAATTAATTAATTTCTTTTTTGACTCTTGAAAAGTTACATTTAATCTGAAACTTATTCAAGACAAGAAATGACATTTAAACTTGAAGAATTTCATATTTTTCTGTGCAACTCTGAATGGAACTAACCCATAGGTTACAAGTTTAAGTTGATCCTTAATATGTTGTTTAGCTTCTTTGATCTCCATTTCTTCAAATGCATCAGAACAATTCGCAGTCTTACAATTATATGGATATCAGGTAAACATAAAGTCATATGCAAACAACAATGAATTGGCAGTAATGCCACAAGATCGGGTGGTTCGTTTGGAATGGGACCGAAGATATCTTTCAGTTCTTGGAGTAGAAAACAGTCGTCTATATGAGTTGAGATTACAAACTCCAGAAAATGTATTCGTAGAAGAAGAAAATGAGTTGCGCCAAGTAATGGATTCTTTCAGAGTCAACAAAGTGAATGCATGAAATGTATTTGAGGGTTTTCAGGTGTAATTGCTGAAACATTGTAATTTCAATCACTAAAGCAAATTGCTCGTATTCATTTTAGAGTTTGACATTGGGGTCCTCTCTCACTAATCTAATATCTCTTGATTCATTGATTAAGTAAAAGGTCACCAAAGATTGACAAAGAATCAATTTCTCTAAAACAGGAATCACTTCTGGGCTGCCAAAAGGCATCATTTAAACAAACTTTACAAATGGTCACAAATTGTGCAAGTTCACAATAGAAGATTGTGCACTCGAGATCGAGGGTTGCTGCTGTTGGTTATGATCTAACTTCAAACTGTCCTGCTCGTGTTAGAGCCCGAAAGCCTTTGTAAGGATGATTTGGCAAGTTCTTCACATCGAGTTTATCTACTTGCAGGCCAGAGAGGACTACACCCATGATCTTAAAACGCACTTGAACTGTTGGAAATACATGAAGCTGTTGTAATCCTGATTCAAGTGTTAATGTTCCAGACATTGAAGGGGTTTTATCTTTTGGCATCTTTCCAATCGTCCAAGAGCAGATCTGTTTA

mRNA sequence

TAAAATCTGAAACACAAAGTTAGTGTTTCCCTTTCTCTAGATTCCTCAAAAATGGCCGTAATCCTCCACTCCTTCCTACCTTCAATTCAAACACTCACTTCTCCAATTCGCCAAAGGATTCCCAGCACTTCTTCTACGCGGTCGCCTATCATTTCATTCCCCAAATGTTGTTCTCAATCTCAATCGGTAATTCTTCACAATCTCTAATCATTCTGGAACTTGCTACCTACTTCCATTTATCGTTACCGCTACCTTTCTAATATATAATCAGATTAAAGACGTTGCAGTTCCAAGGAGGAATGCAATGGCGTTGATTTTGTCCACTTGTATTTTCTCTAATTCTGCTTTCGCTGTGCCTTCCGTTGGGTTATTGGAATACATTGACACTTTTGATGGGTATTCCTTCAAATACCCAAAGAATTGGATTCAAGTTCGAGGGGCGGGGGCTGACATTTTCTTCAGGGATCCCTTTGTTCTTGATGAGAATCTTTCGGTGGAGTTCTCGTCGCCGTCTTCATCTAGGTATAACAGCGTTCAGGATTTGGGACCTCCTGAAGAAGCTGGGAAGAAAGTGCTGAAGCAGTATTTGACAGAGTTCATGTCCACAAGGCTTGGAGTTAGAAGGGAATCCAACATTCTTTCTACTTCTTCCAGAATGGCTGATGATGGCAGAACTTACTACCAAGTTGAGGTAAACATAAAGTCATATGCAAACAACAATGAATTGGCAGTAATGCCACAAGATCGGGTGGTTCGTTTGGAATGGGACCGAAGATATCTTTCAGTTCTTGGAGTAGAAAACAGTCGTCTATATGAGTTGAGATTACAAACTCCAGAAAATGTATTCGTAGAAGAAGAAAATGAGTTGCGCCAAGTAATGGATTCTTTCAGAGTCAACAAAGTGAATGCATGAAATGTATTTGAGGGTTTTCAGGTGTAATTGCTGAAACATTGTAATTTCAATCACTAAAGCAAATTGCTCGTATTCATTTTAGAGTTTGACATTGGGGTCCTCTCTCACTAATCTAATATCTCTTGATTCATTGATTAAGTAAAAGGTCACCAAAGATTGACAAAGAATCAATTTCTCTAAAACAGGAATCACTTCTGGGCTGCCAAAAGGCATCATTTAAACAAACTTTACAAATGGTCACAAATTGTGCAAGTTCACAATAGAAGATTGTGCACTCGAGATCGAGGGTTGCTGCTGTTGGTTATGATCTAACTTCAAACTGTCCTGCTCGTGTTAGAGCCCGAAAGCCTTTGTAAGGATGATTTGGCAAGTTCTTCACATCGAGTTTATCTACTTGCAGGCCAGAGAGGACTACACCCATGATCTTAAAACGCACTTGAACTGTTGGAAATACATGAAGCTGTTGTAATCCTGATTCAAGTGTTAATGTTCCAGACATTGAAGGGGTTTTATCTTTTGGCATCTTTCCAATCGTCCAAGAGCAGATCTGTTTA

Coding sequence (CDS)

ATGGCGTTGATTTTGTCCACTTGTATTTTCTCTAATTCTGCTTTCGCTGTGCCTTCCGTTGGGTTATTGGAATACATTGACACTTTTGATGGGTATTCCTTCAAATACCCAAAGAATTGGATTCAAGTTCGAGGGGCGGGGGCTGACATTTTCTTCAGGGATCCCTTTGTTCTTGATGAGAATCTTTCGGTGGAGTTCTCGTCGCCGTCTTCATCTAGGTATAACAGCGTTCAGGATTTGGGACCTCCTGAAGAAGCTGGGAAGAAAGTGCTGAAGCAGTATTTGACAGAGTTCATGTCCACAAGGCTTGGAGTTAGAAGGGAATCCAACATTCTTTCTACTTCTTCCAGAATGGCTGATGATGGCAGAACTTACTACCAAGTTGAGGTAAACATAAAGTCATATGCAAACAACAATGAATTGGCAGTAATGCCACAAGATCGGGTGGTTCGTTTGGAATGGGACCGAAGATATCTTTCAGTTCTTGGAGTAGAAAACAGTCGTCTATATGAGTTGAGATTACAAACTCCAGAAAATGTATTCGTAGAAGAAGAAAATGAGTTGCGCCAAGTAATGGATTCTTTCAGAGTCAACAAAGTGAATGCATGA

Protein sequence

MALILSTCIFSNSAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDENLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENVFVEEENELRQVMDSFRVNKVNA

Homology

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BLAST of MELO3C026109 vs. ExPASy Swiss-Prot
Match: O23403 (PsbP domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD1 PE=1 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 5.5e-83
Identity = 157/204 (76.96%), Postives = 177/204 (86.76%), Query Frame = 0


Query: 1   MALILSTCIFSN----SAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPF 60
           M L++S  I S     +AFA   V   EYIDTFDGYSFKYP+NWIQVRGAGADIFFRDP 
Sbjct: 85  MGLLMSGLIVSQANLPTAFASTPV-FREYIDTFDGYSFKYPQNWIQVRGAGADIFFRDPV 144

Query: 61  VLDENLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSS 120
           VLDENLSVEFSSPSSS Y S++DLG PEE GK+VL+QYLTEFMSTRLGV+R++NILSTSS
Sbjct: 145 VLDENLSVEFSSPSSSNYTSLEDLGSPEEVGKRVLRQYLTEFMSTRLGVKRQANILSTSS 204

Query: 121 RMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQT 180
           R+ADDG+ YYQVEVNIKSYANNNELAVMPQDRV RLEW+RRYL+VLGVEN RLY +RLQT
Sbjct: 205 RVADDGKLYYQVEVNIKSYANNNELAVMPQDRVARLEWNRRYLAVLGVENDRLYSIRLQT 264

Query: 181 PENVFVEEENELRQVMDSFRVNKV 201
           PE VF+EEE +LR+VMDSFRV K+
Sbjct: 265 PEKVFLEEEKDLRRVMDSFRVEKI 287

[Close]

BLAST of MELO3C026109 vs. ExPASy Swiss-Prot
Match: O80634 (Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL1 PE=1 SV=2)

HSP 1 Score: 48.9 bits (115), Expect = 7.8e-05
Identity = 37/178 (20.79%), Postives = 75/178 (42.13%), Query Frame = 0


Query: 25  YIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDENLSVEFSSPSSSRYNSVQDLGPPE 84
           ++D  DGYS+ YP +W +      D  F+D ++  +N+ V F     +  N + ++GP E
Sbjct: 91  FVDREDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVRF---IPTEKNDIHEVGPME 150

Query: 85  EAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMADDGRTYYQVEVNIKS--YANNNELA 144
           E    ++K         +     +   +       +DG+ YY  E  +++  YA  +   
Sbjct: 151 EVVYDLVKH--------KFAAPNQVATIYDMKERVEDGKNYYTFEYGLRTPIYATTS--- 210

Query: 145 VMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENVFVEEENELRQVMDSFRVNKV 201
                            + + V N+R Y L +   E  + + + +L+ V DS ++ ++
Sbjct: 211 ----------------FATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKILQI 238

[Close]

BLAST of MELO3C026109 vs. NCBI nr
Match: XP_016903181.1 (PREDICTED: psbP domain-containing protein 1, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 398.3 bits (1022), Expect = 4.0e-107
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MALILSTCIFSNSAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDE 60
           MALILSTCIFSNSAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDE
Sbjct: 17  MALILSTCIFSNSAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDE 76

Query: 61  NLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD 120
           NLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD
Sbjct: 77  NLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD 136

Query: 121 DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENV 180
           DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENV
Sbjct: 137 DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENV 196

Query: 181 FVEEENELRQVMDSFRVNKVNA 203
           FVEEENELRQVMDSFRVNKVNA
Sbjct: 197 FVEEENELRQVMDSFRVNKVNA 218

[Close]

BLAST of MELO3C026109 vs. NCBI nr
Match: XP_008464319.1 (PREDICTED: psbP domain-containing protein 1, chloroplastic isoform X1 [Cucumis melo] >KAA0035717.1 psbP domain-containing protein 1 [Cucumis melo var. makuwa] >TYK30829.1 psbP domain-containing protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 398.3 bits (1022), Expect = 4.0e-107
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MALILSTCIFSNSAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDE 60
           MALILSTCIFSNSAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDE
Sbjct: 57  MALILSTCIFSNSAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDE 116

Query: 61  NLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD 120
           NLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD
Sbjct: 117 NLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD 176

Query: 121 DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENV 180
           DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENV
Sbjct: 177 DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENV 236

Query: 181 FVEEENELRQVMDSFRVNKVNA 203
           FVEEENELRQVMDSFRVNKVNA
Sbjct: 237 FVEEENELRQVMDSFRVNKVNA 258

[Close]

BLAST of MELO3C026109 vs. NCBI nr
Match: XP_011654885.1 (psbP domain-containing protein 1, chloroplastic isoform X2 [Cucumis sativus] >XP_031745289.1 psbP domain-containing protein 1, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 390.6 bits (1002), Expect = 8.3e-105
Identity = 198/202 (98.02%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 1   MALILSTCIFSNSAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDE 60
           MAL+LSTCIFSNSA AV SVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDE
Sbjct: 1   MALMLSTCIFSNSALAVSSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDE 60

Query: 61  NLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD 120
           NLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD
Sbjct: 61  NLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD 120

Query: 121 DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENV 180
           DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENV
Sbjct: 121 DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENV 180

Query: 181 FVEEENELRQVMDSFRVNKVNA 203
           FVEEEN+LRQVMDSFRVNKVNA
Sbjct: 181 FVEEENDLRQVMDSFRVNKVNA 202

[Close]

BLAST of MELO3C026109 vs. NCBI nr
Match: XP_004139523.1 (psbP domain-containing protein 1, chloroplastic isoform X1 [Cucumis sativus] >KAE8652838.1 hypothetical protein Csa_022829 [Cucumis sativus])

HSP 1 Score: 390.6 bits (1002), Expect = 8.3e-105
Identity = 198/202 (98.02%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 1   MALILSTCIFSNSAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDE 60
           MAL+LSTCIFSNSA AV SVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDE
Sbjct: 57  MALMLSTCIFSNSALAVSSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDE 116

Query: 61  NLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD 120
           NLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD
Sbjct: 117 NLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD 176

Query: 121 DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENV 180
           DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENV
Sbjct: 177 DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENV 236

Query: 181 FVEEENELRQVMDSFRVNKVNA 203
           FVEEEN+LRQVMDSFRVNKVNA
Sbjct: 237 FVEEENDLRQVMDSFRVNKVNA 258

[Close]

BLAST of MELO3C026109 vs. NCBI nr
Match: XP_022961486.1 (psbP domain-containing protein 1, chloroplastic [Cucurbita moschata] >KAG6590498.1 PsbP domain-containing protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024032.1 PsbP domain-containing protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 381.7 bits (979), Expect = 3.9e-102
Identity = 193/202 (95.54%), Postives = 197/202 (97.52%), Query Frame = 0


Query: 1   MALILSTCIFSNSAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDE 60
           MALILS+CIFSNSA A  SVGLLEYIDTFDGYSF YPKNWIQVRGAGADIFFRDPFVLDE
Sbjct: 63  MALILSSCIFSNSALAEQSVGLLEYIDTFDGYSFNYPKNWIQVRGAGADIFFRDPFVLDE 122

Query: 61  NLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD 120
           N+SVEFSSPSSSRY SV+DLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD
Sbjct: 123 NISVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD 182

Query: 121 DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENV 180
           DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVEN+RLYELRLQTPENV
Sbjct: 183 DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENNRLYELRLQTPENV 242

Query: 181 FVEEENELRQVMDSFRVNKVNA 203
           FVEEENELRQVMDSFRVNKVNA
Sbjct: 243 FVEEENELRQVMDSFRVNKVNA 264

[Close]

BLAST of MELO3C026109 vs. ExPASy TrEMBL
Match: A0A5D3E4R5 (PsbP domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00220 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 1.9e-107
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MALILSTCIFSNSAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDE 60
           MALILSTCIFSNSAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDE
Sbjct: 57  MALILSTCIFSNSAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDE 116

Query: 61  NLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD 120
           NLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD
Sbjct: 117 NLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD 176

Query: 121 DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENV 180
           DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENV
Sbjct: 177 DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENV 236

Query: 181 FVEEENELRQVMDSFRVNKVNA 203
           FVEEENELRQVMDSFRVNKVNA
Sbjct: 237 FVEEENELRQVMDSFRVNKVNA 258

[Close]

BLAST of MELO3C026109 vs. ExPASy TrEMBL
Match: A0A1S4E4M1 (psbP domain-containing protein 1, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502232 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 1.9e-107
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MALILSTCIFSNSAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDE 60
           MALILSTCIFSNSAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDE
Sbjct: 17  MALILSTCIFSNSAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDE 76

Query: 61  NLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD 120
           NLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD
Sbjct: 77  NLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD 136

Query: 121 DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENV 180
           DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENV
Sbjct: 137 DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENV 196

Query: 181 FVEEENELRQVMDSFRVNKVNA 203
           FVEEENELRQVMDSFRVNKVNA
Sbjct: 197 FVEEENELRQVMDSFRVNKVNA 218

[Close]

BLAST of MELO3C026109 vs. ExPASy TrEMBL
Match: A0A1S3CLM8 (psbP domain-containing protein 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502232 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 1.9e-107
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MALILSTCIFSNSAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDE 60
           MALILSTCIFSNSAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDE
Sbjct: 57  MALILSTCIFSNSAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDE 116

Query: 61  NLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD 120
           NLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD
Sbjct: 117 NLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD 176

Query: 121 DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENV 180
           DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENV
Sbjct: 177 DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENV 236

Query: 181 FVEEENELRQVMDSFRVNKVNA 203
           FVEEENELRQVMDSFRVNKVNA
Sbjct: 237 FVEEENELRQVMDSFRVNKVNA 258

[Close]

BLAST of MELO3C026109 vs. ExPASy TrEMBL
Match: A0A0A0LTD2 (PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G181310 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 4.0e-105
Identity = 198/202 (98.02%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 1   MALILSTCIFSNSAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDE 60
           MAL+LSTCIFSNSA AV SVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDE
Sbjct: 1   MALMLSTCIFSNSALAVSSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDE 60

Query: 61  NLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD 120
           NLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD
Sbjct: 61  NLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD 120

Query: 121 DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENV 180
           DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENV
Sbjct: 121 DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENV 180

Query: 181 FVEEENELRQVMDSFRVNKVNA 203
           FVEEEN+LRQVMDSFRVNKVNA
Sbjct: 181 FVEEENDLRQVMDSFRVNKVNA 202

[Close]

BLAST of MELO3C026109 vs. ExPASy TrEMBL
Match: A0A6J1HY63 (psbP domain-containing protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467914 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.9e-102
Identity = 193/202 (95.54%), Postives = 197/202 (97.52%), Query Frame = 0


Query: 1   MALILSTCIFSNSAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDE 60
           MALILS+CIFSNSA A  SVGLLEYIDTFDGYSF YPKNWIQVRGAGADIFFRDPFVLDE
Sbjct: 63  MALILSSCIFSNSAMAEQSVGLLEYIDTFDGYSFNYPKNWIQVRGAGADIFFRDPFVLDE 122

Query: 61  NLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD 120
           N+SVEFSSPSSSRY SV+DLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD
Sbjct: 123 NISVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD 182

Query: 121 DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENV 180
           DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVEN+RLYELRLQTPENV
Sbjct: 183 DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENNRLYELRLQTPENV 242

Query: 181 FVEEENELRQVMDSFRVNKVNA 203
           FVEEENELRQVMDSFRVNKVNA
Sbjct: 243 FVEEENELRQVMDSFRVNKVNA 264

[Close]

BLAST of MELO3C026109 vs. TAIR 10
Match: AT4G15510.1 (Photosystem II reaction center PsbP family protein )

HSP 1 Score: 308.5 bits (789), Expect = 3.9e-84
Identity = 157/204 (76.96%), Postives = 177/204 (86.76%), Query Frame = 0


Query: 1   MALILSTCIFSN----SAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPF 60
           M L++S  I S     +AFA   V   EYIDTFDGYSFKYP+NWIQVRGAGADIFFRDP 
Sbjct: 85  MGLLMSGLIVSQANLPTAFASTPV-FREYIDTFDGYSFKYPQNWIQVRGAGADIFFRDPV 144

Query: 61  VLDENLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSS 120
           VLDENLSVEFSSPSSS Y S++DLG PEE GK+VL+QYLTEFMSTRLGV+R++NILSTSS
Sbjct: 145 VLDENLSVEFSSPSSSNYTSLEDLGSPEEVGKRVLRQYLTEFMSTRLGVKRQANILSTSS 204

Query: 121 RMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQT 180
           R+ADDG+ YYQVEVNIKSYANNNELAVMPQDRV RLEW+RRYL+VLGVEN RLY +RLQT
Sbjct: 205 RVADDGKLYYQVEVNIKSYANNNELAVMPQDRVARLEWNRRYLAVLGVENDRLYSIRLQT 264

Query: 181 PENVFVEEENELRQVMDSFRVNKV 201
           PE VF+EEE +LR+VMDSFRV K+
Sbjct: 265 PEKVFLEEEKDLRRVMDSFRVEKI 287

[Close]

BLAST of MELO3C026109 vs. TAIR 10
Match: AT4G15510.3 (Photosystem II reaction center PsbP family protein )

HSP 1 Score: 308.5 bits (789), Expect = 3.9e-84
Identity = 157/204 (76.96%), Postives = 177/204 (86.76%), Query Frame = 0


Query: 1   MALILSTCIFSN----SAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPF 60
           M L++S  I S     +AFA   V   EYIDTFDGYSFKYP+NWIQVRGAGADIFFRDP 
Sbjct: 3   MGLLMSGLIVSQANLPTAFASTPV-FREYIDTFDGYSFKYPQNWIQVRGAGADIFFRDPV 62

Query: 61  VLDENLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSS 120
           VLDENLSVEFSSPSSS Y S++DLG PEE GK+VL+QYLTEFMSTRLGV+R++NILSTSS
Sbjct: 63  VLDENLSVEFSSPSSSNYTSLEDLGSPEEVGKRVLRQYLTEFMSTRLGVKRQANILSTSS 122

Query: 121 RMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQT 180
           R+ADDG+ YYQVEVNIKSYANNNELAVMPQDRV RLEW+RRYL+VLGVEN RLY +RLQT
Sbjct: 123 RVADDGKLYYQVEVNIKSYANNNELAVMPQDRVARLEWNRRYLAVLGVENDRLYSIRLQT 182

Query: 181 PENVFVEEENELRQVMDSFRVNKV 201
           PE VF+EEE +LR+VMDSFRV K+
Sbjct: 183 PEKVFLEEEKDLRRVMDSFRVEKI 205

[Close]

BLAST of MELO3C026109 vs. TAIR 10
Match: AT4G15510.2 (Photosystem II reaction center PsbP family protein )

HSP 1 Score: 194.5 bits (493), Expect = 8.2e-50
Identity = 101/141 (71.63%), Postives = 115/141 (81.56%), Query Frame = 0


Query: 1   MALILSTCIFSN----SAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPF 60
           M L++S  I S     +AFA   V   EYIDTFDGYSFKYP+NWIQVRGAGADIFFRDP 
Sbjct: 85  MGLLMSGLIVSQANLPTAFASTPV-FREYIDTFDGYSFKYPQNWIQVRGAGADIFFRDPV 144

Query: 61  VLDENLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSS 120
           VLDENLSVEFSSPSSS Y S++DLG PEE GK+VL+QYLTEFMSTRLGV+R++NILSTSS
Sbjct: 145 VLDENLSVEFSSPSSSNYTSLEDLGSPEEVGKRVLRQYLTEFMSTRLGVKRQANILSTSS 204

Query: 121 RMADDGRTYYQVEVNIKSYAN 138
           R+ADDG+ YYQVEV+     N
Sbjct: 205 RVADDGKLYYQVEVSQSQVPN 224

[Close]

BLAST of MELO3C026109 vs. TAIR 10
Match: AT2G39470.1 (PsbP-like protein 2 )

HSP 1 Score: 48.9 bits (115), Expect = 5.5e-06
Identity = 37/178 (20.79%), Postives = 75/178 (42.13%), Query Frame = 0


Query: 25  YIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDENLSVEFSSPSSSRYNSVQDLGPPE 84
           ++D  DGYS+ YP +W +      D  F+D ++  +N+ V F     +  N + ++GP E
Sbjct: 91  FVDREDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVRF---IPTEKNDIHEVGPME 150

Query: 85  EAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMADDGRTYYQVEVNIKS--YANNNELA 144
           E    ++K         +     +   +       +DG+ YY  E  +++  YA  +   
Sbjct: 151 EVVYDLVKH--------KFAAPNQVATIYDMKERVEDGKNYYTFEYGLRTPIYATTS--- 210

Query: 145 VMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENVFVEEENELRQVMDSFRVNKV 201
                            + + V N+R Y L +   E  + + + +L+ V DS ++ ++
Sbjct: 211 ----------------FATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKILQI 238

[Close]

BLAST of MELO3C026109 vs. TAIR 10
Match: AT2G39470.2 (PsbP-like protein 2 )

HSP 1 Score: 48.9 bits (115), Expect = 5.5e-06
Identity = 37/178 (20.79%), Postives = 75/178 (42.13%), Query Frame = 0


Query: 25  YIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDENLSVEFSSPSSSRYNSVQDLGPPE 84
           ++D  DGYS+ YP +W +      D  F+D ++  +N+ V F     +  N + ++GP E
Sbjct: 83  FVDREDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVRF---IPTEKNDIHEVGPME 142

Query: 85  EAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMADDGRTYYQVEVNIKS--YANNNELA 144
           E    ++K         +     +   +       +DG+ YY  E  +++  YA  +   
Sbjct: 143 EVVYDLVKH--------KFAAPNQVATIYDMKERVEDGKNYYTFEYGLRTPIYATTS--- 202

Query: 145 VMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENVFVEEENELRQVMDSFRVNKV 201
                            + + V N+R Y L +   E  + + + +L+ V DS ++ ++
Sbjct: 203 ----------------FATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKILQI 230

The following BLAST results are available for this feature:

BLAST of MELO3C026109 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23403	5.5e-83	76.96	PsbP domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
O80634	7.8e-05	20.79	Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis t...	[more]

BLAST of MELO3C026109 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016903181.1	4.0e-107	100.00	PREDICTED: psbP domain-containing protein 1, chloroplastic isoform X2 [Cucumis m...	[more]
XP_008464319.1	4.0e-107	100.00	PREDICTED: psbP domain-containing protein 1, chloroplastic isoform X1 [Cucumis m...	[more]
XP_011654885.1	8.3e-105	98.02	psbP domain-containing protein 1, chloroplastic isoform X2 [Cucumis sativus] >XP...	[more]
XP_004139523.1	8.3e-105	98.02	psbP domain-containing protein 1, chloroplastic isoform X1 [Cucumis sativus] >KA...	[more]
XP_022961486.1	3.9e-102	95.54	psbP domain-containing protein 1, chloroplastic [Cucurbita moschata] >KAG6590498...	[more]

BLAST of MELO3C026109 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E4R5	1.9e-107	100.00	PsbP domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S4E4M1	1.9e-107	100.00	psbP domain-containing protein 1, chloroplastic isoform X2 OS=Cucumis melo OX=36...	[more]
A0A1S3CLM8	1.9e-107	100.00	psbP domain-containing protein 1, chloroplastic isoform X1 OS=Cucumis melo OX=36...	[more]
A0A0A0LTD2	4.0e-105	98.02	PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G181310 PE=4 S...	[more]
A0A6J1HY63	1.9e-102	95.54	psbP domain-containing protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of MELO3C026109 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15510.1	3.9e-84	76.96	Photosystem II reaction center PsbP family protein	[more]
AT4G15510.3	3.9e-84	76.96	Photosystem II reaction center PsbP family protein	[more]
AT4G15510.2	8.2e-50	71.63	Photosystem II reaction center PsbP family protein	[more]
AT2G39470.1	5.5e-06	20.79	PsbP-like protein 2	[more]
AT2G39470.2	5.5e-06	20.79	PsbP-like protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002683	PsbP, C-terminal	PFAM	PF01789	PsbP	coord: 22..197 e-value: 6.1E-49 score: 166.1
None	No IPR available	GENE3D	3.40.1000.10	Mog1/PsbP, alpha/beta/alpha sandwich	coord: 17..197 e-value: 4.6E-52 score: 178.5
None	No IPR available	PANTHER	PTHR31407:SF15	PSBP DOMAIN-CONTAINING PROTEIN 1, CHLOROPLASTIC	coord: 1..201
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 1..201
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	55724	Mog1p/PsbP-like	coord: 25..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C026109.1	MELO3C026109.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0009654	photosystem II oxygen evolving complex
molecular_function	GO:0005509	calcium ion binding