MELO3C026098 (gene) Melon (DHL92) v4

Overview
NameMELO3C026098
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUlp1-like peptidase
Locationchr12: 14184470 .. 14184758 (-)
RNA-Seq ExpressionMELO3C026098
SyntenyMELO3C026098
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACATCCATTAGTGAAGACCTTGAAGATGGTATCGTACCGATCAACATATCTTCGGGGGAGGAGGATATCCCACTACCTATTGTCCAAGTTCTGTTAAAGCTGAACGAAGATGTATGTTCCATAATTATATTGGTTTAAGTTAATACTGTTACTACTAAAGTTAACTATTTCCTGTGTTTAGCCTCTCGATTTAGACATCAAGGTCATTTTTCCTTCCCATGCGATGGATGTTGTACCTAAGGAAAGGTCGACCAAGAAGAGAGAGGTACTGTGGAAGTTGTAG

mRNA sequence

ATGGAAACATCCATTAGTGAAGACCTTGAAGATGGTATCGTACCGATCAACATATCTTCGGGGGAGGAGGATATCCCACTACCTATTGTCCAAGTTCTGTTAAAGCTGAACGAAGATCCTCTCGATTTAGACATCAAGGTCATTTTTCCTTCCCATGCGATGGATGTTGTACCTAAGGAAAGGTCGACCAAGAAGAGAGAGGTACTGTGGAAGTTGTAG

Coding sequence (CDS)

ATGGAAACATCCATTAGTGAAGACCTTGAAGATGGTATCGTACCGATCAACATATCTTCGGGGGAGGAGGATATCCCACTACCTATTGTCCAAGTTCTGTTAAAGCTGAACGAAGATCCTCTCGATTTAGACATCAAGGTCATTTTTCCTTCCCATGCGATGGATGTTGTACCTAAGGAAAGGTCGACCAAGAAGAGAGAGGTACTGTGGAAGTTGTAG

Protein sequence

METSISEDLEDGIVPINISSGEEDIPLPIVQVLLKLNEDPLDLDIKVIFPSHAMDVVPKERSTKKREVLWKL
Homology
BLAST of MELO3C026098 vs. NCBI nr
Match: KAA0046543.1 (hypothetical protein E6C27_scaffold114G00630 [Cucumis melo var. makuwa] >TYK28714.1 hypothetical protein E5676_scaffold403G00310 [Cucumis melo var. makuwa])

HSP 1 Score: 68.9 bits (167), Expect = 2.0e-08
Identity = 41/66 (62.12%), Postives = 49/66 (74.24%), Query Frame = 0

Query: 3  TSISEDLEDGIVPINISSGEEDIPLPIVQVLLKLNEDPLDLDIKVIFPSHAMDVVPKERS 62
          TSISED EDGIVPI+ISS  ED+P P VQVLL+L E      IKVI P   +DVVPK+R+
Sbjct: 19 TSISEDPEDGIVPIDISSRGEDVPPPPVQVLLELKEK----GIKVIPPFDFIDVVPKKRT 78

Query: 63 TKKREV 69
          T+KR +
Sbjct: 79 TRKRGI 80

BLAST of MELO3C026098 vs. NCBI nr
Match: KAA0044924.1 (Ulp1-like peptidase [Cucumis melo var. makuwa] >TYK16546.1 Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 59.7 bits (143), Expect = 1.2e-05
Identity = 37/64 (57.81%), Postives = 46/64 (71.88%), Query Frame = 0

Query: 3   TSISEDLEDGIVPINISSGEEDIPLPIVQVLLKLNEDPLDLDIKVIFPSHAMDVVPKE-R 62
           TSI+ED  DGIVPINISSG E++ +P VQVLL+  E+P+D D + I P    +VVPKE R
Sbjct: 150 TSINEDPIDGIVPINISSGGENVSIPHVQVLLESKEEPIDFD-RGIPPYDFFNVVPKEVR 209

Query: 63  STKK 66
            T K
Sbjct: 210 DTVK 212

BLAST of MELO3C026098 vs. NCBI nr
Match: KAA0051324.1 (hypothetical protein E6C27_scaffold55G00410 [Cucumis melo var. makuwa])

HSP 1 Score: 55.1 bits (131), Expect = 3.0e-04
Identity = 30/70 (42.86%), Postives = 47/70 (67.14%), Query Frame = 0

Query: 3   TSISEDLEDGIVPINISSGEEDIPLPIVQVLLKLNEDPLDLDIKVIFPSHAMDVVPKERS 62
           TSISED  DG++ I++ S  ED+  P VQ +L L  +P++ D++V  P     VVPK+++
Sbjct: 78  TSISEDPRDGVI-IDVPSEGEDVSPPPVQPMLDLKYEPIEFDVEVKLPYVFSHVVPKKKT 137

Query: 63  TKKREVLWKL 73
           T+KR++  KL
Sbjct: 138 TRKRDIRKKL 146

BLAST of MELO3C026098 vs. ExPASy TrEMBL
Match: A0A5A7TSM6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G00310 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 9.6e-09
Identity = 41/66 (62.12%), Postives = 49/66 (74.24%), Query Frame = 0

Query: 3  TSISEDLEDGIVPINISSGEEDIPLPIVQVLLKLNEDPLDLDIKVIFPSHAMDVVPKERS 62
          TSISED EDGIVPI+ISS  ED+P P VQVLL+L E      IKVI P   +DVVPK+R+
Sbjct: 19 TSISEDPEDGIVPIDISSRGEDVPPPPVQVLLELKEK----GIKVIPPFDFIDVVPKKRT 78

Query: 63 TKKREV 69
          T+KR +
Sbjct: 79 TRKRGI 80

BLAST of MELO3C026098 vs. ExPASy TrEMBL
Match: A0A5D3D1I4 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003640 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.8e-06
Identity = 37/64 (57.81%), Postives = 46/64 (71.88%), Query Frame = 0

Query: 3   TSISEDLEDGIVPINISSGEEDIPLPIVQVLLKLNEDPLDLDIKVIFPSHAMDVVPKE-R 62
           TSI+ED  DGIVPINISSG E++ +P VQVLL+  E+P+D D + I P    +VVPKE R
Sbjct: 150 TSINEDPIDGIVPINISSGGENVSIPHVQVLLESKEEPIDFD-RGIPPYDFFNVVPKEVR 209

Query: 63  STKK 66
            T K
Sbjct: 210 DTVK 212

BLAST of MELO3C026098 vs. ExPASy TrEMBL
Match: A0A5A7U7N5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00410 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.4e-04
Identity = 30/70 (42.86%), Postives = 47/70 (67.14%), Query Frame = 0

Query: 3   TSISEDLEDGIVPINISSGEEDIPLPIVQVLLKLNEDPLDLDIKVIFPSHAMDVVPKERS 62
           TSISED  DG++ I++ S  ED+  P VQ +L L  +P++ D++V  P     VVPK+++
Sbjct: 78  TSISEDPRDGVI-IDVPSEGEDVSPPPVQPMLDLKYEPIEFDVEVKLPYVFSHVVPKKKT 137

Query: 63  TKKREVLWKL 73
           T+KR++  KL
Sbjct: 138 TRKRDIRKKL 146

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAA0046543.12.0e-0862.12hypothetical protein E6C27_scaffold114G00630 [Cucumis melo var. makuwa] >TYK2871... [more]
KAA0044924.11.2e-0557.81Ulp1-like peptidase [Cucumis melo var. makuwa] >TYK16546.1 Ulp1-like peptidase [... [more]
KAA0051324.13.0e-0442.86hypothetical protein E6C27_scaffold55G00410 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A5A7TSM69.6e-0962.12Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3D1I45.8e-0657.81Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G0... [more]
A0A5A7U7N51.4e-0442.86Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C026098.1MELO3C026098.1mRNA