MELO3C026075 (gene) Melon (DHL92) v4

Overview
NameMELO3C026075
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionPentatricopeptide repeat-containing protein
Locationchr12: 14642392 .. 14644750 (+)
RNA-Seq ExpressionMELO3C026075
SyntenyMELO3C026075
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTTTCAGCTCTGCCATTCGCCGCCCACCTTCTTCACTTACCACCATTCCCTTTCCAATTCTCTCACTCCTCAACGTAAAACAACTCTCTCCAACTCCTCTCCTCTTTTCAAGCTCAATCCCATTCCTCGTCACTCAACACCATTCCTCCAAATTACCAATATCTCGCTACAGGAACACTCTCCTCAAGAAACCCATAATACAATTCCCTCTGACGATGAAATCTCCAAATACTCAGATGCGAAATCCGGTTCCTCCTCCAAAAGCTCCGTTTGGGTCAATCCAAGAAGCCCCAGAGCTTCCAAACTTCGGAAGCAGTCGTACGAAGCAAGGTATGCTTCTCTTGTTAGAATATCGGAGTCTTTAGACTCTTGTAATCCATGTGAGGTAGATGTTGCTGATGTCTTGAAGGTGATAGGTAATAACATTTTAGAACAGGACGCTGTTGTAGTGCTGAATAACATGTCAAATTCCCAGACTGCGTTGCTTGCTCTTCGCTACTTCCAGGATATGCTGAAATCAAGTAAACAGACGATTTTTTATAATGTGACACTGAAGGTGTTTAGGAAGTGCAGAGATATGGAGGGTGCAGAGGAACTGTTCGAAGAAATGCTTAACAGAGGAGTTAAGCCTGATAATGTGACATTTTCTACCATTATTAGTTGTGCTAGGTTGTGTTCTTTACCAAGTAAGGCTGTTGAGTGGTTTGAGAAGATGCCAAGTTTTGACTGTAATCCTGATGATGTTACTTACTCTACTATGATTGATGCCTATGGACGTGCTGGTAATGTTGACATGGCTTTCAGTTTGTATGACCGTGCAAGAACAGAAAACTGGCGTATTGATCCTGCGACATTCTCAACAATGATCAAAATTCATGGAGTGGCTGGGAACTATGATGGGTGCTTGAATGTTTATGAAGAAATGAAGGCTATAGGCATCAAGCCAAACTTGGTTATATATAACAGCTTGTTGGATGCTATGGGTAGGGCTAAAAGACCTTGGCAGATCAAGACCATTTACAAAGAGATGATTAAAAGTGGATTTTCACCAAGTTGGGCAACTTATGCTTCTCTTTTACGTGCCTATGGAAGAGCCAGGTATGGTGAAGATGCTCTCATTGTTTACAAGGAGATGAAGGAAAAGGGACTGCAGTTAAACGTAATTCTCTACAATACGCTTTTAGCTATGTGTGCTGATGTTGGCTACGTTAATGAGGCTGTTGAAATTTTTCAAGATATGAAGAATTCTGGGACTTGCTCACCTGACAGTTGGACATTTTCTTCCATGATCACCATATATTCCTGTAGTGGAAAAGTATCTGAGGCTGAAGAAATGTTGAATGATATGGTGGAAGCTGGTTTTGACCCTAATATCTTTGTCTTAACGTCACTAATCCAGTGCTACGGGAAAGCCAAACGTGTTGATGATGTAGTGAGGACATTCAATCAATTGATAGAGTTAGGATTAACTCCAGACGATCGATTCTGTGGCTGCCTTCTCAATGTGATTACCCAGACACCAAAAGAGGAAATTAGTAAGCTGATTGATTGTGTTGTGAGAGCTAATCCAAAACTTGGATTTGTGGTTGAACTCTTGCTAGGAGAGCAAGACAAGGAAGGAAATTTCAGAACTGAAGCCTCAGAACTCTTTAGTGTTGTCAGTGCTGATGTGAGAAAAGCCTACTGCAATTGCTTAATTGATCTCTGTGTAAATTTAGATCTTTTGGATAAGGCATGTGAACTACTGAATTTGGGGCTTACACTTCAGATATATAAAGATTTGCAGTCCAGGTCTCCAACTCAGTGGTCTCTTTATCTTAAGGGTCTTTCTCTTGGAGCTGCTCTCACTGCATTACACGTTTGGATAAATGACTTAACAAAGGTACTTGAATCCGGGGAGGAACTTCCACCATTACTTGGAATAAATACTGGACATGGAAAACACAAGTATTCAGATAAGGGTTTGGCAAGCGTCTTTGAATCACATTTAAAGGAATTAAATGCACCTTTCCACGAGGCACCAGAAAAGGTCGGATGGTTTTTGACGACTAAAGTGGCAGCAAAATCATGGTTGGAGTCTAGAAGTTCACCTGAATTGGTTGCAGCATAGGTTGTACCTGAAAGGTCCAATAATATCTGTTGTGATATCTTTCATCTAAACCCTTTTCTCCCCTTTCTTTTCAACGGCCATATATTTCTTGGAAGACAGCTTTACGGTAAAGGATGCAATGAAGAGTTTTGCTATCTTTGTTCTTTCGTTGTATTATAATTCATTGGAATGTCATATCGATCTTCAAACACTGTTTTCTTGCTTACTGCTAATTTCTTTATGGTATATTTTTGCACTTGGTTAA

mRNA sequence

ATGGCGTTTCAGCTCTGCCATTCGCCGCCCACCTTCTTCACTTACCACCATTCCCTTTCCAATTCTCTCACTCCTCAACGTAAAACAACTCTCTCCAACTCCTCTCCTCTTTTCAAGCTCAATCCCATTCCTCGTCACTCAACACCATTCCTCCAAATTACCAATATCTCGCTACAGGAACACTCTCCTCAAGAAACCCATAATACAATTCCCTCTGACGATGAAATCTCCAAATACTCAGATGCGAAATCCGGTTCCTCCTCCAAAAGCTCCGTTTGGGTCAATCCAAGAAGCCCCAGAGCTTCCAAACTTCGGAAGCAGTCGTACGAAGCAAGTTGGACATTTTCTTCCATGATCACCATATATTCCTGTAGTGGAAAAGTATCTGAGGCTGAAGAAATGTTGAATGATATGGTGGAAGCTGGTTTTGACCCTAATATCTTTGTCTTAACGTCACTAATCCAGTGCTACGGGAAAGCCAAACGTGTTGATGATGTAGTGAGGACATTCAATCAATTGATAGAGTTAGGATTAACTCCAGACGATCGATTCTGTGGCTGCCTTCTCAATGTGATTACCCAGACACCAAAAGAGGAAATTAGTAAGCTGATTGATTGTGTTGTGAGAGCTAATCCAAAACTTGGATTTGTGGTTGAACTCTTGCTAGGAGAGCAAGACAAGGAAGGAAATTTCAGAACTGAAGCCTCAGAACTCTTTAGTGTTGTCAGTGCTGATGTGAGAAAAGCCTACTGCAATTGCTTAATTGATCTCTGTGTAAATTTAGATCTTTTGGATAAGGCATGTGAACTACTGAATTTGGGGCTTACACTTCAGATATATAAAGATTTGCAGTCCAGGTCTCCAACTCAGTGGTCTCTTTATCTTAAGGGTCTTTCTCTTGGAGCTGCTCTCACTGCATTACACGTTTGGATAAATGACTTAACAAAGGTACTTGAATCCGGGGAGGAACTTCCACCATTACTTGGAATAAATACTGGACATGGAAAACACAAGTATTCAGATAAGGGTTTGGCAAGCGTCTTTGAATCACATTTAAAGGAATTAAATGCACCTTTCCACGAGGCACCAGAAAAGGTCGGATGGTTTTTGACGACTAAAGTGGCAGCAAAATCATGGTTGGAGTCTAGAAGTTCACCTGAATTGGTTGCAGCATAGGTTGTACCTGAAAGGTCCAATAATATCTGTTGTGATATCTTTCATCTAAACCCTTTTCTCCCCTTTCTTTTCAACGGCCATATATTTCTTGGAAGACAGCTTTACGGTAAAGGATGCAATGAAGAGTTTTGCTATCTTTGTTCTTTCGTTGTATTATAATTCATTGGAATGTCATATCGATCTTCAAACACTGTTTTCTTGCTTACTGCTAATTTCTTTATGGTATATTTTTGCACTTGGTTAA

Coding sequence (CDS)

ATGGCGTTTCAGCTCTGCCATTCGCCGCCCACCTTCTTCACTTACCACCATTCCCTTTCCAATTCTCTCACTCCTCAACGTAAAACAACTCTCTCCAACTCCTCTCCTCTTTTCAAGCTCAATCCCATTCCTCGTCACTCAACACCATTCCTCCAAATTACCAATATCTCGCTACAGGAACACTCTCCTCAAGAAACCCATAATACAATTCCCTCTGACGATGAAATCTCCAAATACTCAGATGCGAAATCCGGTTCCTCCTCCAAAAGCTCCGTTTGGGTCAATCCAAGAAGCCCCAGAGCTTCCAAACTTCGGAAGCAGTCGTACGAAGCAAGTTGGACATTTTCTTCCATGATCACCATATATTCCTGTAGTGGAAAAGTATCTGAGGCTGAAGAAATGTTGAATGATATGGTGGAAGCTGGTTTTGACCCTAATATCTTTGTCTTAACGTCACTAATCCAGTGCTACGGGAAAGCCAAACGTGTTGATGATGTAGTGAGGACATTCAATCAATTGATAGAGTTAGGATTAACTCCAGACGATCGATTCTGTGGCTGCCTTCTCAATGTGATTACCCAGACACCAAAAGAGGAAATTAGTAAGCTGATTGATTGTGTTGTGAGAGCTAATCCAAAACTTGGATTTGTGGTTGAACTCTTGCTAGGAGAGCAAGACAAGGAAGGAAATTTCAGAACTGAAGCCTCAGAACTCTTTAGTGTTGTCAGTGCTGATGTGAGAAAAGCCTACTGCAATTGCTTAATTGATCTCTGTGTAAATTTAGATCTTTTGGATAAGGCATGTGAACTACTGAATTTGGGGCTTACACTTCAGATATATAAAGATTTGCAGTCCAGGTCTCCAACTCAGTGGTCTCTTTATCTTAAGGGTCTTTCTCTTGGAGCTGCTCTCACTGCATTACACGTTTGGATAAATGACTTAACAAAGGTACTTGAATCCGGGGAGGAACTTCCACCATTACTTGGAATAAATACTGGACATGGAAAACACAAGTATTCAGATAAGGGTTTGGCAAGCGTCTTTGAATCACATTTAAAGGAATTAAATGCACCTTTCCACGAGGCACCAGAAAAGGTCGGATGGTTTTTGACGACTAAAGTGGCAGCAAAATCATGGTTGGAGTCTAGAAGTTCACCTGAATTGGTTGCAGCATAG

Protein sequence

MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQEHSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEASWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFNQLIELGLTPDDRFCGCLLNVITQTPKEEISKLIDCVVRANPKLGFVVELLLGEQDKEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA
Homology
BLAST of MELO3C026075 vs. ExPASy Swiss-Prot
Match: Q8GWE0 (Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=P67 PE=1 SV=3)

HSP 1 Score: 425.6 bits (1093), Expect = 5.9e-118
Identity = 208/282 (73.76%), Postives = 244/282 (86.52%), Query Frame = 0

Query: 112 SWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFN 171
           SWTFSS+IT+Y+CSG+VSEAE  L  M EAGF+P +FVLTS+IQCYGKAK+VDDVVRTF+
Sbjct: 421 SWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFD 480

Query: 172 QLIELGLTPDDRFCGCLLNVITQTPKEEISKLIDCVVRANPKLGFVVELLLGEQD-KEGN 231
           Q++ELG+TPDDRFCGCLLNV+TQTP EEI KLI CV +A PKLG VV++L+ EQ+ +EG 
Sbjct: 481 QVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGV 540

Query: 232 FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYKDLQSRSPTQ 291
           F+ EASEL   + +DV+KAY NCLIDLCVNL+ L++ACE+L LGL   IY  LQS+S TQ
Sbjct: 541 FKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQ 600

Query: 292 WSLYLKGLSLGAALTALHVWINDLTK-VLESGEELPPLLGINTGHGKHKYSDKGLASVFE 351
           WSL+LK LSLGAALTALHVW+NDL++  LESGEE PPLLGINTGHGKHKYSDKGLA+VFE
Sbjct: 601 WSLHLKSLSLGAALTALHVWMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFE 660

Query: 352 SHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 392
           SHLKELNAPFHEAP+KVGWFLTT VAAK+WLESR S   V+A
Sbjct: 661 SHLKELNAPFHEAPDKVGWFLTTSVAAKAWLESRRSAGGVSA 702

BLAST of MELO3C026075 vs. ExPASy Swiss-Prot
Match: Q10PZ4 (Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0215900 PE=3 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 6.8e-98
Identity = 172/289 (59.52%), Postives = 221/289 (76.47%), Query Frame = 0

Query: 102 SKLRKQSYEASWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAK 161
           + +  +S   SW++SSM+T+YSC+G V+ AE +LN+MVEAGF PNIF+LTSLI+CYGKA 
Sbjct: 387 ASMDSRSKPDSWSYSSMVTLYSCTGNVAGAEGILNEMVEAGFKPNIFILTSLIRCYGKAG 446

Query: 162 RVDDVVRTFNQLIELGLTPDDRFCGCLLNVITQTPKEEISKLIDCVVRANPKLGFVVELL 221
           R DDVVR+F  L +LG+TPDDRFCGCLL V   TP +E+ K+I C+ R++ +LG VV LL
Sbjct: 447 RTDDVVRSFAMLEDLGITPDDRFCGCLLTVAAGTPADELGKVIGCIDRSSAQLGAVVRLL 506

Query: 222 LGEQDKEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYK 281
           +         R  A EL       VR  YCNCL+DL VNL  ++KAC LL++ L L IY 
Sbjct: 507 VDAAAPSEPLREAAGELLGGARGVVRMPYCNCLMDLAVNLSQMEKACALLDVALRLGIYS 566

Query: 282 DLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSD 341
           ++Q+R+ TQWSL+L+GLS+GAALT LHVW++DL   L++G+ELPPLLGI+TG GK+ YS 
Sbjct: 567 NVQTRTQTQWSLHLRGLSVGAALTTLHVWMSDLYAALQAGDELPPLLGIHTGQGKNTYSY 626

Query: 342 KGLASVFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVA 391
           KGLA+VFESHLKEL+APFHEAP+K GWFLTT VAA+ WLE++ S ELVA
Sbjct: 627 KGLATVFESHLKELDAPFHEAPDKAGWFLTTSVAARHWLETKKSAELVA 675

BLAST of MELO3C026075 vs. ExPASy Swiss-Prot
Match: B4F8Z1 (Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays OX=4577 GN=ATP4 PE=2 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 3.7e-96
Identity = 170/279 (60.93%), Postives = 217/279 (77.78%), Query Frame = 0

Query: 112 SWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFN 171
           SW++SSM+T+YS +  V  AE +LN+MVEAGF PNIFVLTSLI+CYGK  R DDVVR+F 
Sbjct: 412 SWSYSSMVTLYSSTANVLSAEGILNEMVEAGFKPNIFVLTSLIRCYGKVGRTDDVVRSFG 471

Query: 172 QLIELGLTPDDRFCGCLLNVITQTPKEEISKLIDCVVRANPKLGFVVELLLGEQDKEGNF 231
            L +LG+ PDDRFCGCLL+V   TP EE+ K+I C+ R+N +LG VV+LL+     E +F
Sbjct: 472 MLQDLGIIPDDRFCGCLLSVAANTPAEELGKVISCIERSNVQLGAVVKLLVDRSSSE-SF 531

Query: 232 RTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYKDLQSRSPTQW 291
           R  A EL       V+  YCNCL+DLCVNL+ ++KAC LL+    L IY ++Q+R+ TQW
Sbjct: 532 REAARELLRSSRGVVKMPYCNCLMDLCVNLNQMEKACALLDAAQQLGIYANIQTRTQTQW 591

Query: 292 SLYLKGLSLGAALTALHVWINDLTKVLESGEE-LPPLLGINTGHGKHKYSDKGLASVFES 351
           SL+L+GLS+GAALT LHVW+NDL   L++G E LPPLLGI+TG GK+ YSD+GLA++FE+
Sbjct: 592 SLHLRGLSVGAALTTLHVWMNDLYTSLQTGNEGLPPLLGIHTGQGKNTYSDRGLAAMFEA 651

Query: 352 HLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELV 390
           HLKEL+APFHEAP+K GWFLTT VAAK WLES+++ ELV
Sbjct: 652 HLKELDAPFHEAPDKAGWFLTTNVAAKQWLESKAASELV 689

BLAST of MELO3C026075 vs. ExPASy Swiss-Prot
Match: Q9LS25 (Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g46580 PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.3e-53
Identity = 108/276 (39.13%), Postives = 171/276 (61.96%), Query Frame = 0

Query: 112 SWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFN 171
           ++++++M+ IY   GK  +A E+  +M++AG   N+   T L+QC GKAKR+DDVV  F+
Sbjct: 432 NFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFD 491

Query: 172 QLIELGLTPDDRFCGCLLNVITQ-TPKEEISKLIDCVVRANPKLGFVVELLLGEQDKEGN 231
             I+ G+ PDDR CGCLL+V+      E+  K++ C+ RAN KL   V L++ E+ +   
Sbjct: 492 LSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKKLVTFVNLIVDEKTEYET 551

Query: 232 FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYKDLQSRSPTQ 291
            + E   + +    + R+ +CNCLID+C   +  ++A ELL LG    +Y  L +++  +
Sbjct: 552 VKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELLYLGTLFGLYPGLHNKTIKE 611

Query: 292 WSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASVFES 351
           WSL ++ LS+GAA TAL  W+  L  +++  EELP L    TG G H++S +GLA+ F  
Sbjct: 612 WSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQTGTGTHRFS-QGLANSFAL 671

Query: 352 HLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSP 387
           HL++L+APF ++ ++ G F+ TK    SWLES+  P
Sbjct: 672 HLQQLSAPFRQS-DRPGIFVATKEDLVSWLESKFPP 705

BLAST of MELO3C026075 vs. ExPASy Swiss-Prot
Match: Q9SIC9 (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g31400 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.4e-13
Identity = 79/339 (23.30%), Postives = 140/339 (41.30%), Query Frame = 0

Query: 115 FSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVD---------- 174
           +S++I     +G V  A  ++++M + G  PN+    S+I  +G++  +D          
Sbjct: 552 YSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGS 611

Query: 175 -----------------DVVRTFNQLIELGLTPDDRFC-------GCLLNVITQTPKEEI 234
                             V++ F QL         + C        C+L V  +  + EI
Sbjct: 612 LPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEI 671

Query: 235 -------SKLIDCVVRA-----------------NPKLGFVVELLLGEQDKEGNFRTEAS 294
                  S +++   R                  N   G V  LL+G+++   N   +A 
Sbjct: 672 KPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQRE---NVWLQAQ 731

Query: 295 ELFSVVS---ADVRKAYCNCLIDLCVNLDLLDKACELLNL-GLTLQIYKDLQSRSPTQWS 354
            LF  V+        A+ N L D+  +     +  EL+ L G + Q+++++ S S     
Sbjct: 732 SLFDKVNEMDGSTASAFYNALTDMLWHFG-QKRGAELVALEGRSRQVWENVWSDS----C 791

Query: 355 LYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHK--YSDKGLASVFES 390
           L L  +S GAA   +H W+ ++  ++  G ELP +L I TG GKH     D  L    E 
Sbjct: 792 LDLHLMSSGAARAMVHAWLLNIRSIVYEGHELPKVLSILTGWGKHSKVVGDGALRRAVEV 851

BLAST of MELO3C026075 vs. NCBI nr
Match: XP_008464281.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucumis melo] >KAA0042345.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK15469.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 656.4 bits (1692), Expect = 1.6e-184
Identity = 391/704 (55.54%), Postives = 391/704 (55.54%), Query Frame = 0

Query: 1   MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60
           MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE
Sbjct: 1   MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60

Query: 61  HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEA--------- 120
           HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEA         
Sbjct: 61  HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLVRIS 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAVVVLNNMSNSQTALLALRYFQDMLKSSKQTI 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 FYNVTLKVFRKCRDMEGAEELFEEMLNRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKSGFSPSWATYASL 360

Query: 361 ------------------------------------------------------------ 392
                                                                       
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKNSGT 420

BLAST of MELO3C026075 vs. NCBI nr
Match: XP_004139516.1 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucumis sativus] >KGN64994.1 hypothetical protein Csa_022775 [Cucumis sativus])

HSP 1 Score: 619.4 bits (1596), Expect = 2.1e-173
Identity = 372/704 (52.84%), Postives = 380/704 (53.98%), Query Frame = 0

Query: 1   MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60
           MAFQLC+SPPTFFT HH LSNSLTPQRKTTLSNSSPLFKL+PIPRHS PFLQITN+SLQE
Sbjct: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60

Query: 61  HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEA--------- 120
           H+PQ+T NTIPS DEISKY D+KSGSSS SSVWVNPRSPRASKLRKQSYEA         
Sbjct: 61  HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360

Query: 361 ------------------------------------------------------------ 392
                                                                       
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420

BLAST of MELO3C026075 vs. NCBI nr
Match: XP_038877791.1 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Benincasa hispida])

HSP 1 Score: 608.2 bits (1567), Expect = 4.9e-170
Identity = 366/704 (51.99%), Postives = 379/704 (53.84%), Query Frame = 0

Query: 1   MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60
           MAFQLCHSP TFFT HHSLSNSLT QRKTTL NSS LFKLNPIPRHS PFLQITN+SLQE
Sbjct: 1   MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLCNSSRLFKLNPIPRHSKPFLQITNVSLQE 60

Query: 61  HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEA--------- 120
           ++PQETHN  PS+DEISKY D KS SSSKSSVWVNPRSPRASKLRKQSYEA         
Sbjct: 61  YAPQETHNPSPSNDEISKYPDGKSSSSSKSSVWVNPRSPRASKLRKQSYEARYASLTRIS 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 ESLDSCNPCQEDVADVLKEIGSNILQQDAVVVLNNMSNSQTALLALRYFQDVLKSSKQAI 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 FYNVTLKVFRKCRDMEGAEKLFEEMLKRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360

Query: 361 ------------------------------------------------------------ 392
                                                                       
Sbjct: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVYEAVEVFQDMKSSGT 420

BLAST of MELO3C026075 vs. NCBI nr
Match: XP_022142513.1 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Momordica charantia])

HSP 1 Score: 546.2 bits (1406), Expect = 2.3e-151
Identity = 337/704 (47.87%), Postives = 356/704 (50.57%), Query Frame = 0

Query: 1   MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60
           MAFQLCHSP TFF+ HH LSNSL  Q + TL  SS  FKLNP P HS   L+ITN+SLQE
Sbjct: 1   MAFQLCHSPSTFFSDHHPLSNSLNSQHRITLRKSSHRFKLNPTPHHSKTCLRITNVSLQE 60

Query: 61  HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEA--------- 120
           ++ QE  N IP+ DE SKY D KS SSSKSSVWVNPRSPRASKLR QSYEA         
Sbjct: 61  YAAQEAQNPIPTQDESSKYPDGKSNSSSKSSVWVNPRSPRASKLRNQSYEARYASLTRIS 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 ESLDSCNPCEEDVADVLKGMGSNILEQDAVAVLNNMSNSSTALLALQMFQKVLKSSKKAI 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 LYNVTLKVLRKSRDMEGAEKLFDEMLKRGVKPDNVTFSTVISCARLCSLPNKAVEWFEKM 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTLIKIHGVAGNY 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360

Query: 361 ------------------------------------------------------------ 392
                                                                       
Sbjct: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFEDMKSSGA 420

BLAST of MELO3C026075 vs. NCBI nr
Match: XP_023520706.1 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 544.7 bits (1402), Expect = 6.7e-151
Identity = 340/705 (48.23%), Postives = 362/705 (51.35%), Query Frame = 0

Query: 1   MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTL-SNSSPLFKLNPIPRHSTPFLQITNISLQ 60
           MAFQL H P TFFT H    NSLT   KTTL  +SS +FKLNPIP HS PFLQITN+S Q
Sbjct: 1   MAFQLSHFPSTFFTDH----NSLTFHYKTTLCKSSSRVFKLNPIPYHSKPFLQITNVSPQ 60

Query: 61  EHSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEA-------- 120
           E++PQET N+ PSDDEISK+ D KSGSSSK+SVWVNP SPRASKLRKQSYEA        
Sbjct: 61  EYAPQETRNSSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKI 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 SESLDSCNPCEDDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVLRYFQDVLKSSKQA 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 VFYNVTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARFCSLPNKAVEWFEM 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 MPSFDCNPDDITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGN 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 YDGCLNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYAS 360

Query: 361 ------------------------------------------------------------ 392
                                                                       
Sbjct: 361 LLRAYARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSG 420

BLAST of MELO3C026075 vs. ExPASy TrEMBL
Match: A0A5A7TLM5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00400 PE=3 SV=1)

HSP 1 Score: 656.4 bits (1692), Expect = 7.6e-185
Identity = 391/704 (55.54%), Postives = 391/704 (55.54%), Query Frame = 0

Query: 1   MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60
           MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE
Sbjct: 1   MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60

Query: 61  HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEA--------- 120
           HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEA         
Sbjct: 61  HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLVRIS 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAVVVLNNMSNSQTALLALRYFQDMLKSSKQTI 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 FYNVTLKVFRKCRDMEGAEELFEEMLNRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKSGFSPSWATYASL 360

Query: 361 ------------------------------------------------------------ 392
                                                                       
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKNSGT 420

BLAST of MELO3C026075 vs. ExPASy TrEMBL
Match: A0A1S3CL39 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502208 PE=3 SV=1)

HSP 1 Score: 656.4 bits (1692), Expect = 7.6e-185
Identity = 391/704 (55.54%), Postives = 391/704 (55.54%), Query Frame = 0

Query: 1   MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60
           MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE
Sbjct: 1   MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60

Query: 61  HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEA--------- 120
           HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEA         
Sbjct: 61  HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLVRIS 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAVVVLNNMSNSQTALLALRYFQDMLKSSKQTI 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 FYNVTLKVFRKCRDMEGAEELFEEMLNRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKSGFSPSWATYASL 360

Query: 361 ------------------------------------------------------------ 392
                                                                       
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKNSGT 420

BLAST of MELO3C026075 vs. ExPASy TrEMBL
Match: A0A0A0LVP1 (Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G173140 PE=3 SV=1)

HSP 1 Score: 619.4 bits (1596), Expect = 1.0e-173
Identity = 372/704 (52.84%), Postives = 380/704 (53.98%), Query Frame = 0

Query: 1   MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60
           MAFQLC+SPPTFFT HH LSNSLTPQRKTTLSNSSPLFKL+PIPRHS PFLQITN+SLQE
Sbjct: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60

Query: 61  HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEA--------- 120
           H+PQ+T NTIPS DEISKY D+KSGSSS SSVWVNPRSPRASKLRKQSYEA         
Sbjct: 61  HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360

Query: 361 ------------------------------------------------------------ 392
                                                                       
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420

BLAST of MELO3C026075 vs. ExPASy TrEMBL
Match: A0A6J1CNE5 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012613 PE=3 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 1.1e-151
Identity = 337/704 (47.87%), Postives = 356/704 (50.57%), Query Frame = 0

Query: 1   MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60
           MAFQLCHSP TFF+ HH LSNSL  Q + TL  SS  FKLNP P HS   L+ITN+SLQE
Sbjct: 1   MAFQLCHSPSTFFSDHHPLSNSLNSQHRITLRKSSHRFKLNPTPHHSKTCLRITNVSLQE 60

Query: 61  HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEA--------- 120
           ++ QE  N IP+ DE SKY D KS SSSKSSVWVNPRSPRASKLR QSYEA         
Sbjct: 61  YAAQEAQNPIPTQDESSKYPDGKSNSSSKSSVWVNPRSPRASKLRNQSYEARYASLTRIS 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 ESLDSCNPCEEDVADVLKGMGSNILEQDAVAVLNNMSNSSTALLALQMFQKVLKSSKKAI 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 LYNVTLKVLRKSRDMEGAEKLFDEMLKRGVKPDNVTFSTVISCARLCSLPNKAVEWFEKM 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTLIKIHGVAGNY 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360

Query: 361 ------------------------------------------------------------ 392
                                                                       
Sbjct: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFEDMKSSGA 420

BLAST of MELO3C026075 vs. ExPASy TrEMBL
Match: A0A6J1EHV4 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111434309 PE=3 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 7.2e-151
Identity = 340/705 (48.23%), Postives = 360/705 (51.06%), Query Frame = 0

Query: 1   MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNS-SPLFKLNPIPRHSTPFLQITNISLQ 60
           MAFQL H P TFFT H    NSLT   KTTL  S S +FKLNPIP HS PFLQITN+S Q
Sbjct: 1   MAFQLSHFPSTFFTDH----NSLTFHYKTTLCKSFSRVFKLNPIPYHSKPFLQITNVSQQ 60

Query: 61  EHSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEA-------- 120
           E++PQET N  PSDDEISK+ D KSGSSSK+SVWVNP SPRASKLRKQSYEA        
Sbjct: 61  EYAPQETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKI 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 SESLDSCNPCEVDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVHRYFQDVLKSSKQA 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 VFYNVTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEK 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 MPSFDCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGN 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 YDGCLNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYAS 360

Query: 361 ------------------------------------------------------------ 392
                                                                       
Sbjct: 361 LLRAYARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSG 420

BLAST of MELO3C026075 vs. TAIR 10
Match: AT4G16390.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 425.6 bits (1093), Expect = 4.2e-119
Identity = 208/282 (73.76%), Postives = 244/282 (86.52%), Query Frame = 0

Query: 112 SWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFN 171
           SWTFSS+IT+Y+CSG+VSEAE  L  M EAGF+P +FVLTS+IQCYGKAK+VDDVVRTF+
Sbjct: 421 SWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFD 480

Query: 172 QLIELGLTPDDRFCGCLLNVITQTPKEEISKLIDCVVRANPKLGFVVELLLGEQD-KEGN 231
           Q++ELG+TPDDRFCGCLLNV+TQTP EEI KLI CV +A PKLG VV++L+ EQ+ +EG 
Sbjct: 481 QVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGV 540

Query: 232 FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYKDLQSRSPTQ 291
           F+ EASEL   + +DV+KAY NCLIDLCVNL+ L++ACE+L LGL   IY  LQS+S TQ
Sbjct: 541 FKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQ 600

Query: 292 WSLYLKGLSLGAALTALHVWINDLTK-VLESGEELPPLLGINTGHGKHKYSDKGLASVFE 351
           WSL+LK LSLGAALTALHVW+NDL++  LESGEE PPLLGINTGHGKHKYSDKGLA+VFE
Sbjct: 601 WSLHLKSLSLGAALTALHVWMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFE 660

Query: 352 SHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 392
           SHLKELNAPFHEAP+KVGWFLTT VAAK+WLESR S   V+A
Sbjct: 661 SHLKELNAPFHEAPDKVGWFLTTSVAAKAWLESRRSAGGVSA 702


HSP 2 Score: 52.8 bits (125), Expect = 7.4e-07
Identity = 46/144 (31.94%), Postives = 71/144 (49.31%), Query Frame = 0

Query: 5   LCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQEHSPQ 64
           LC SP +       L N L+   K+T  +    +  N    HS   LQ T++S+QE  PQ
Sbjct: 6   LCSSPSSLLHDPLPLCNLLSVYPKSTPRSFLSSYNPNSSHFHSRNLLQATHVSVQEAIPQ 65

Query: 65  ETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEASWTFSSMITIYSC 124
              + +   D           ++SKS VWVNP+SPRAS+LR++SY++   +SS+I +   
Sbjct: 66  SEKSKLVDVD-----LPIPEPTASKSYVWVNPKSPRASQLRRKSYDS--RYSSLIKLAES 125

Query: 125 SGKVSEAEEMLNDMVEAGFDPNIF 149
                  E  + D++  GF   +F
Sbjct: 126 LDACKPNEADVCDVI-TGFGGKLF 141

BLAST of MELO3C026075 vs. TAIR 10
Match: AT5G46580.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 211.1 bits (536), Expect = 1.6e-54
Identity = 108/276 (39.13%), Postives = 171/276 (61.96%), Query Frame = 0

Query: 112 SWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFN 171
           ++++++M+ IY   GK  +A E+  +M++AG   N+   T L+QC GKAKR+DDVV  F+
Sbjct: 432 NFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFD 491

Query: 172 QLIELGLTPDDRFCGCLLNVITQ-TPKEEISKLIDCVVRANPKLGFVVELLLGEQDKEGN 231
             I+ G+ PDDR CGCLL+V+      E+  K++ C+ RAN KL   V L++ E+ +   
Sbjct: 492 LSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKKLVTFVNLIVDEKTEYET 551

Query: 232 FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYKDLQSRSPTQ 291
            + E   + +    + R+ +CNCLID+C   +  ++A ELL LG    +Y  L +++  +
Sbjct: 552 VKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELLYLGTLFGLYPGLHNKTIKE 611

Query: 292 WSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASVFES 351
           WSL ++ LS+GAA TAL  W+  L  +++  EELP L    TG G H++S +GLA+ F  
Sbjct: 612 WSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQTGTGTHRFS-QGLANSFAL 671

Query: 352 HLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSP 387
           HL++L+APF ++ ++ G F+ TK    SWLES+  P
Sbjct: 672 HLQQLSAPFRQS-DRPGIFVATKEDLVSWLESKFPP 705

BLAST of MELO3C026075 vs. TAIR 10
Match: AT2G31400.1 (genomes uncoupled 1 )

HSP 1 Score: 79.0 bits (193), Expect = 9.7e-15
Identity = 79/339 (23.30%), Postives = 140/339 (41.30%), Query Frame = 0

Query: 115 FSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVD---------- 174
           +S++I     +G V  A  ++++M + G  PN+    S+I  +G++  +D          
Sbjct: 552 YSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGS 611

Query: 175 -----------------DVVRTFNQLIELGLTPDDRFC-------GCLLNVITQTPKEEI 234
                             V++ F QL         + C        C+L V  +  + EI
Sbjct: 612 LPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEI 671

Query: 235 -------SKLIDCVVRA-----------------NPKLGFVVELLLGEQDKEGNFRTEAS 294
                  S +++   R                  N   G V  LL+G+++   N   +A 
Sbjct: 672 KPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQRE---NVWLQAQ 731

Query: 295 ELFSVVS---ADVRKAYCNCLIDLCVNLDLLDKACELLNL-GLTLQIYKDLQSRSPTQWS 354
            LF  V+        A+ N L D+  +     +  EL+ L G + Q+++++ S S     
Sbjct: 732 SLFDKVNEMDGSTASAFYNALTDMLWHFG-QKRGAELVALEGRSRQVWENVWSDS----C 791

Query: 355 LYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHK--YSDKGLASVFES 390
           L L  +S GAA   +H W+ ++  ++  G ELP +L I TG GKH     D  L    E 
Sbjct: 792 LDLHLMSSGAARAMVHAWLLNIRSIVYEGHELPKVLSILTGWGKHSKVVGDGALRRAVEV 851

BLAST of MELO3C026075 vs. TAIR 10
Match: AT3G16010.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 4.7e-09
Identity = 28/85 (32.94%), Postives = 49/85 (57.65%), Query Frame = 0

Query: 115 FSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFNQLI 174
           +++++ IY   GKV +A ++  +M  AG  P ++  T LI+  GKA RVD+    +  ++
Sbjct: 271 YTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDML 330

Query: 175 ELGLTPDDRFCGCLLNVITQTPKEE 200
             GLTPD  F   L+N++ +  + E
Sbjct: 331 RDGLTPDVVFLNNLMNILGKVGRVE 355

BLAST of MELO3C026075 vs. TAIR 10
Match: AT2G01740.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 5.1e-08
Identity = 52/206 (25.24%), Postives = 98/206 (47.57%), Query Frame = 0

Query: 102 SKLRKQSYEASWTFSSMITIYSC-SGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKA 161
           +K+  Q      T   +I    C +GK+ EA E++ DM ++   P++ + T+++  Y K+
Sbjct: 292 AKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKS 351

Query: 162 KRVDDVVRTFNQLIELGLTPDDRFCGCLLNVITQTPKEEISKLIDCVVRANPKLGFVVEL 221
            R+   V  +++LIE G  PD      +++ I +  +   + +  C+ +AN     +  +
Sbjct: 352 GRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKAN---DVMYTV 411

Query: 222 LLGEQDKEGNFRTEASELFSVVS----ADVRKAYCNCLIDLCVNLDLLDKACELLNLGLT 281
           L+    KEG+F  E   LFS +S       +  Y + +  LC   +L+D A +L    + 
Sbjct: 412 LIDALCKEGDF-IEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVD-AFKLKTRMVQ 471

Query: 282 LQIYKDLQSRSPTQWSLYLKGLSLGA 303
             +  DL + +   + L  KGL + A
Sbjct: 472 EGLLLDLLAYTTLIYGLASKGLMVEA 492

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8GWE05.9e-11873.76Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidop... [more]
Q10PZ46.8e-9859.52Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic OS=Oryza... [more]
B4F8Z13.7e-9660.93Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays OX=4... [more]
Q9LS252.3e-5339.13Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidop... [more]
Q9SIC91.4e-1323.30Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
XP_008464281.11.6e-18455.54PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic ... [more]
XP_004139516.12.1e-17352.84pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucumis sa... [more]
XP_038877791.14.9e-17051.99pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Benincasa ... [more]
XP_022142513.12.3e-15147.87pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Momordica ... [more]
XP_023520706.16.7e-15148.23pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucurbita ... [more]
Match NameE-valueIdentityDescription
A0A5A7TLM57.6e-18555.54Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3CL397.6e-18555.54pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucumis ... [more]
A0A0A0LVP11.0e-17352.84Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G173140 PE=3 SV... [more]
A0A6J1CNE51.1e-15147.87pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Momordic... [more]
A0A6J1EHV47.2e-15148.23pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucurbit... [more]
Match NameE-valueIdentityDescription
AT4G16390.14.2e-11973.76pentatricopeptide (PPR) repeat-containing protein [more]
AT5G46580.11.6e-5439.13pentatricopeptide (PPR) repeat-containing protein [more]
AT2G31400.19.7e-1523.30genomes uncoupled 1 [more]
AT3G16010.14.7e-0932.94Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT2G01740.15.1e-0825.24Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002625Smr domainSMARTSM00463SMR_2coord: 290..380
e-value: 1.1E-14
score: 64.8
IPR002625Smr domainPROSITEPS50828SMRcoord: 293..377
score: 17.165545
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 114..147
e-value: 3.3E-7
score: 28.1
coord: 150..181
e-value: 2.8E-6
score: 25.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 150..178
e-value: 0.002
score: 18.2
coord: 251..272
e-value: 1.2
score: 9.6
coord: 114..143
e-value: 6.6E-7
score: 29.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 111..145
score: 10.807899
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 146..180
score: 10.424253
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 106..209
e-value: 2.6E-18
score: 68.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..96
NoneNo IPR availablePANTHERPTHR47447OS03G0856100 PROTEINcoord: 52..111
coord: 112..390
NoneNo IPR availablePANTHERPTHR47447:SF8PENTATRICOPEPTIDE REPEAT PROTEIN-RELATEDcoord: 52..111
coord: 112..390

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C026075.1MELO3C026075.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding