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MELO3C026052.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonstart_codonCDSpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.GTGTGTATGTGTTTGATGCACATTATAAACACAGTTCAGGGGCCCCTAAACACAATGGCCGATTGAAATTGAAGAAAAAAAGTTCGGAGATTCCATTTCTTTTTCTTGAACATCAAACTTACAATTATCAATACATTAATAATGGTGTGTGAAACTTCCGATTATCCTCAGAAATCTCTCCAATTCAAGCAAAATGACAAATTCTTCTCCAAAATTCTGTCCCGAGAAAGTTCCAGAGCCAACTACTCTTCAAGAATCTACTACGGCGGATTGGCCGGCGCCGTTCCCTTCGTTTGGGAGTCCCAGCCAGGTACGCCTATTCACCGATTTTCCGACAACCTAACTCCTCCTCTTACTCCTCCTCCTTCTTACTTTTCCGATTCCCTCAAAAAACCGCTCAAGAAACGTTCCAAATCTCTCTCTCTTCTTCACATCTTCTTCAATTCCAAGAGGAAATTCGATCTGTTGTCTCCGCCGCCCGTTTCTAAATCCGCCTCATTGCCGTCTCCCGGATCCGTGTTCGACTCAGCCGCCGGCGCGAAGTTCACAGGGCGGCGTTCCGCGCGGCGGTTTCCGACTGAAAAGGAGGAAGAGAATGCGGCGGCTAGTGGTTCGGTTCTTTGTTTCGGACTGGGTAGGTGAGCGGCGGTATACGGCTCTGAATCTGAATCGGAATGGGAGTAAAAGCTTTTAGAATAATGGTTTTGTGCATTTGGTGAATCGACAACGCCAAAAGGGATTGGTTGAAAATTTGTAAAATTAATAATAATAATAATAGTAATAAACTTTA GTGTGTATGTGTTTGATGCACATTATAAACACAGTTCAGGGGCCCCTAAACACAATGGCCGATTGAAATTGAAGAAAAAAAGTTCGGAGATTCCATTTCTTTTTCTTGAACATCAAACTTACAATTATCAATACATTAATAATGGTGTGTGAAACTTCCGATTATCCTCAGAAATCTCTCCAATTCAAGCAAAATGACAAATTCTTCTCCAAAATTCTGTCCCGAGAAAGTTCCAGAGCCAACTACTCTTCAAGAATCTACTACGGCGGATTGGCCGGCGCCGTTCCCTTCGTTTGGGAGTCCCAGCCAGGTACGCCTATTCACCGATTTTCCGACAACCTAACTCCTCCTCTTACTCCTCCTCCTTCTTACTTTTCCGATTCCCTCAAAAAACCGCTCAAGAAACGTTCCAAATCTCTCTCTCTTCTTCACATCTTCTTCAATTCCAAGAGGAAATTCGATCTGTTGTCTCCGCCGCCCGTTTCTAAATCCGCCTCATTGCCGTCTCCCGGATCCGTGTTCGACTCAGCCGCCGGCGCGAAGTTCACAGGGCGGCGTTCCGCGCGGCGGTTTCCGACTGAAAAGGAGGAAGAGAATGCGGCGGCTAGTGGTTCGGTTCTTTGTTTCGGACTGGGTAGGTGAGCGGCGGTATACGGCTCTGAATCTGAATCGGAATGGGAGTAAAAGCTTTTAGAATAATGGTTTTGTGCATTTGGTGAATCGACAACGCCAAAAGGGATTGGTTGAAAATTTGTAAAATTAATAATAATAATAATAGTAATAAACTTTA ATGGTGTGTGAAACTTCCGATTATCCTCAGAAATCTCTCCAATTCAAGCAAAATGACAAATTCTTCTCCAAAATTCTGTCCCGAGAAAGTTCCAGAGCCAACTACTCTTCAAGAATCTACTACGGCGGATTGGCCGGCGCCGTTCCCTTCGTTTGGGAGTCCCAGCCAGGTACGCCTATTCACCGATTTTCCGACAACCTAACTCCTCCTCTTACTCCTCCTCCTTCTTACTTTTCCGATTCCCTCAAAAAACCGCTCAAGAAACGTTCCAAATCTCTCTCTCTTCTTCACATCTTCTTCAATTCCAAGAGGAAATTCGATCTGTTGTCTCCGCCGCCCGTTTCTAAATCCGCCTCATTGCCGTCTCCCGGATCCGTGTTCGACTCAGCCGCCGGCGCGAAGTTCACAGGGCGGCGTTCCGCGCGGCGGTTTCCGACTGAAAAGGAGGAAGAGAATGCGGCGGCTAGTGGTTCGGTTCTTTGTTTCGGACTGGGTAGGTGA MVCETSDYPQKSLQFKQNDKFFSKILSRESSRANYSSRIYYGGLAGAVPFVWESQPGTPIHRFSDNLTPPLTPPPSYFSDSLKKPLKKRSKSLSLLHIFFNSKRKFDLLSPPPVSKSASLPSPGSVFDSAAGAKFTGRRSARRFPTEKEEENAAASGSVLCFGLGR Homology
BLAST of MELO3C026052.jh1 vs. NCBI nr
Match: XP_008464261.1 (PREDICTED: uncharacterized protein LOC103502186 [Cucumis melo]) HSP 1 Score: 333 bits (854), Expect = 3.31e-115 Identity = 165/166 (99.40%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of MELO3C026052.jh1 vs. NCBI nr
Match: XP_011653717.1 (uncharacterized protein LOC105435254 [Cucumis sativus]) HSP 1 Score: 315 bits (807), Expect = 4.87e-108 Identity = 156/166 (93.98%), Postives = 161/166 (96.99%), Query Frame = 0
BLAST of MELO3C026052.jh1 vs. NCBI nr
Match: XP_038882810.1 (uncharacterized protein LOC120073955 [Benincasa hispida]) HSP 1 Score: 291 bits (744), Expect = 2.18e-98 Identity = 148/170 (87.06%), Postives = 155/170 (91.18%), Query Frame = 0
BLAST of MELO3C026052.jh1 vs. NCBI nr
Match: KAG6603545.1 (hypothetical protein SDJN03_04154, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033731.1 hypothetical protein SDJN02_03456, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 274 bits (700), Expect = 1.11e-91 Identity = 139/170 (81.76%), Postives = 150/170 (88.24%), Query Frame = 0
BLAST of MELO3C026052.jh1 vs. NCBI nr
Match: KAG7027544.1 (hypothetical protein SDJN02_11558, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 244 bits (622), Expect = 7.14e-80 Identity = 125/169 (73.96%), Postives = 139/169 (82.25%), Query Frame = 0
BLAST of MELO3C026052.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CL26 (uncharacterized protein LOC103502186 OS=Cucumis melo OX=3656 GN=LOC103502186 PE=4 SV=1) HSP 1 Score: 333 bits (854), Expect = 1.60e-115 Identity = 165/166 (99.40%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of MELO3C026052.jh1 vs. ExPASy TrEMBL
Match: A0A0A0L1H9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G329820 PE=4 SV=1) HSP 1 Score: 315 bits (807), Expect = 2.36e-108 Identity = 156/166 (93.98%), Postives = 161/166 (96.99%), Query Frame = 0
BLAST of MELO3C026052.jh1 vs. ExPASy TrEMBL
Match: A0A6J1EB06 (uncharacterized protein LOC111432413 OS=Cucurbita moschata OX=3662 GN=LOC111432413 PE=4 SV=1) HSP 1 Score: 240 bits (613), Expect = 8.68e-79 Identity = 121/166 (72.89%), Postives = 137/166 (82.53%), Query Frame = 0
BLAST of MELO3C026052.jh1 vs. ExPASy TrEMBL
Match: A0A6J1IKR7 (uncharacterized protein LOC111478334 OS=Cucurbita maxima OX=3661 GN=LOC111478334 PE=4 SV=1) HSP 1 Score: 229 bits (585), Expect = 1.26e-74 Identity = 114/138 (82.61%), Postives = 122/138 (88.41%), Query Frame = 0
BLAST of MELO3C026052.jh1 vs. ExPASy TrEMBL
Match: A0A6J1CSP7 (uncharacterized protein LOC111013865 OS=Momordica charantia OX=3673 GN=LOC111013865 PE=4 SV=1) HSP 1 Score: 206 bits (525), Expect = 7.55e-66 Identity = 105/134 (78.36%), Postives = 114/134 (85.07%), Query Frame = 0
BLAST of MELO3C026052.jh1 vs. TAIR 10
Match: AT2G40475.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56260.2); Has 477 Blast hits to 219 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 91; Fungi - 61; Plants - 144; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). ) HSP 1 Score: 76.6 bits (187), Expect = 2.0e-14 Identity = 60/158 (37.97%), Postives = 84/158 (53.16%), Query Frame = 0
BLAST of MELO3C026052.jh1 vs. TAIR 10
Match: AT5G01790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 65.1 bits (157), Expect = 6.1e-11 Identity = 67/179 (37.43%), Postives = 88/179 (49.16%), Query Frame = 0
BLAST of MELO3C026052.jh1 vs. TAIR 10
Match: AT3G56260.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40475.1). ) HSP 1 Score: 55.8 bits (133), Expect = 3.7e-08 Identity = 49/140 (35.00%), Postives = 66/140 (47.14%), Query Frame = 0
BLAST of MELO3C026052.jh1 vs. TAIR 10
Match: AT1G06930.1 (unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; Bacteria - 29; Metazoa - 379; Fungi - 125; Plants - 120; Viruses - 25; Other Eukaryotes - 3800 (source: NCBI BLink). ) HSP 1 Score: 53.5 bits (127), Expect = 1.9e-07 Identity = 38/100 (38.00%), Postives = 45/100 (45.00%), Query Frame = 0
BLAST of MELO3C026052.jh1 vs. TAIR 10
Match: AT4G25845.1 (BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 51.6 bits (122), Expect = 7.0e-07 Identity = 28/60 (46.67%), Postives = 34/60 (56.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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