MELO3C025954 (gene) Melon (DHL92) v4

Overview
NameMELO3C025954
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionStress response protein NST1-like
Locationchr11: 13666749 .. 13667434 (-)
RNA-Seq ExpressionMELO3C025954
SyntenyMELO3C025954
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATTCGTCAAGGAACTTGAGGCAGAAGAGAAGAAGGCTGAAGCAAAAGAGAAGAAGAAAGCTGAAGAGGAAAAGAGAAAAGAAGAAGAAAGTTTAAGAAGGAAAAAGGAAGAGAAAAAAGCCCTGCGAGAAGAAAGCGCTAAGCGAGAAGAAGAGAGGAGGAAGAAAGAAAGAGAAAAGAAAAAGGTCACAAGGAGGACGCCCATCTCTGCTAAGTGTTTAAAGAGAAAAAAGAAGAATGTTGAATCTTTGGTGGAGACCAAAACCAAATTGGCAGAGATCCAAACCGCTAAGAAAAAGAAAAAAGAGACACTCATGGACCAAAGTGAGCAAGTGGAAAGTGTAGTAGCAAGAAACAAGACTACCATGAGGTTGTGGCTGAAGAGTTTAGTCAAGAAATTGAGAGGATGAGTCCTTTGAAGCCAAGGCTAAGGCCTGAAGAACTAGGGCTCATAAGTGTCGTGCAACCGAAGAAAGGCAAGAATAAGACGGGGGCATTAAGGCACTTAGGTCGTTTGCTCAATTTGCTCTACGAACCCATTAAGGCACTTAAGTCGGAGAAGATTTTCATGGGTGAGACTAAGGTTAGATTGGACATTGTTAATATGTTTTATGCGAGGAAGTATCATCCGGATGATTCATACGCGATAGTGGAAGGGGAGAAGATGCCTTTTACCACATAA

mRNA sequence

ATGAAATTCGTCAAGGAACTTGAGGCAGAAGAGAAGAAGGCTGAAGCAAAAGAGAAGAAGAAAGCTGAAGAGGAAAAGAGAAAAGAAGAAGAAAGTTTAAGAAGGAAAAAGGAAGAGAAAAAAGCCCTGCGAGAAGAAAGCGCTAAGCGAGAAGAAGAGAGGAGGAAGAAAGAAAGAGAAAAGAAAAAGGTCACAAGGAGGACGCCCATCTCTGCTAAGTGTTTAAAGAGAAAAAAGAAGAATGTTGAATCTTTGGTGGAGACCAAAACCAAATTGGCAGAGATCCAAACCGCTAAGAAAAAGAAAAAAGAGACACTCATGGACCAAAAGTTTAGTCAAGAAATTGAGAGGATGAGTCCTTTGAAGCCAAGGCTAAGGCCTGAAGAACTAGGGCTCATAAGTGTCGTGCAACCGAAGAAAGGCAAGAATAAGACGGGGGCATTAAGGCACTTAGGTCGTTTGCTCAATTTGCTCTACGAACCCATTAAGGCACTTAAGTCGGAGAAGATTTTCATGGGTGAGACTAAGGTTAGATTGGACATTGTTAATATGTTTTATGCGAGGAAGTATCATCCGGATGATTCATACGCGATAGTGGAAGGGGAGAAGATGCCTTTTACCACATAA

Coding sequence (CDS)

ATGAAATTCGTCAAGGAACTTGAGGCAGAAGAGAAGAAGGCTGAAGCAAAAGAGAAGAAGAAAGCTGAAGAGGAAAAGAGAAAAGAAGAAGAAAGTTTAAGAAGGAAAAAGGAAGAGAAAAAAGCCCTGCGAGAAGAAAGCGCTAAGCGAGAAGAAGAGAGGAGGAAGAAAGAAAGAGAAAAGAAAAAGGTCACAAGGAGGACGCCCATCTCTGCTAAGTGTTTAAAGAGAAAAAAGAAGAATGTTGAATCTTTGGTGGAGACCAAAACCAAATTGGCAGAGATCCAAACCGCTAAGAAAAAGAAAAAAGAGACACTCATGGACCAAAAGTTTAGTCAAGAAATTGAGAGGATGAGTCCTTTGAAGCCAAGGCTAAGGCCTGAAGAACTAGGGCTCATAAGTGTCGTGCAACCGAAGAAAGGCAAGAATAAGACGGGGGCATTAAGGCACTTAGGTCGTTTGCTCAATTTGCTCTACGAACCCATTAAGGCACTTAAGTCGGAGAAGATTTTCATGGGTGAGACTAAGGTTAGATTGGACATTGTTAATATGTTTTATGCGAGGAAGTATCATCCGGATGATTCATACGCGATAGTGGAAGGGGAGAAGATGCCTTTTACCACATAA

Protein sequence

MKFVKELEAEEKKAEAKEKKKAEEEKRKEEESLRRKKEEKKALREESAKREEERRKKEREKKKVTRRTPISAKCLKRKKKNVESLVETKTKLAEIQTAKKKKKETLMDQKFSQEIERMSPLKPRLRPEELGLISVVQPKKGKNKTGALRHLGRLLNLLYEPIKALKSEKIFMGETKVRLDIVNMFYARKYHPDDSYAIVEGEKMPFTT
Homology
BLAST of MELO3C025954 vs. NCBI nr
Match: TYK11975.1 (Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa])

HSP 1 Score: 135.2 bits (339), Expect = 6.5e-28
Identity = 69/82 (84.15%), Postives = 77/82 (93.90%), Query Frame = 0

Query: 97  TAKKKKKETLMDQKFSQEIERMSPLKPRLRPEELGLISVVQPKKGKNKTGALRHLGRLLN 156
           ++KK+    ++ ++FSQEIERMSPLKPRLRPEELGLISVVQPKKGKNKTGALRHLGRLLN
Sbjct: 237 SSKKQDYHEVVAEEFSQEIERMSPLKPRLRPEELGLISVVQPKKGKNKTGALRHLGRLLN 296

Query: 157 LLYEPIKALKSEKIFMGETKVR 179
           LLYEPIKALKSEKIFMGETK+R
Sbjct: 297 LLYEPIKALKSEKIFMGETKMR 318

BLAST of MELO3C025954 vs. NCBI nr
Match: KAA0060804.1 (hypothetical protein E6C27_scaffold137G00260 [Cucumis melo var. makuwa])

HSP 1 Score: 118.6 bits (296), Expect = 6.3e-23
Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = 0

Query: 118 MSPLKPRLRPEELGLISVVQPKKGKNKTGALRHLGRLLNLLYEPIKALKSEKIFMGETKV 177
           MSPLKPRLRPEELGLISVVQPKKGKNKTGALRHLGRL NLLYEPIKALKSEKIFMGETK+
Sbjct: 1   MSPLKPRLRPEELGLISVVQPKKGKNKTGALRHLGRLPNLLYEPIKALKSEKIFMGETKM 60

Query: 178 R 179
           R
Sbjct: 61  R 61

BLAST of MELO3C025954 vs. NCBI nr
Match: KAA0066935.1 (hypothetical protein E6C27_scaffold550G00650 [Cucumis melo var. makuwa])

HSP 1 Score: 96.7 bits (239), Expect = 2.6e-16
Identity = 54/116 (46.55%), Postives = 64/116 (55.17%), Query Frame = 0

Query: 118 MSPLKPRLRPEELGLISVVQPKKGKNKT---------------------------GALRH 177
           MS L+ RLRPEE GL+   +PKK KNK                            G    
Sbjct: 1   MSHLESRLRPEEQGLVDTTRPKKDKNKVRTSRSEDVQTSEPLNDQKLDKLLKIEKGLFLF 60

Query: 178 LGRLLNLLYEPIKALKSEKIFMGETKVRLDIVNMFYARKYHPDDSYAIVEGEKMPF 207
            G LL+ LYEPIKA K EK F G+ KVRLD+VNMFY  KY+  +SYA VEG+K+PF
Sbjct: 61  SGHLLDFLYEPIKAFKWEKFFRGDAKVRLDVVNMFYTVKYYQVESYATVEGKKIPF 116

BLAST of MELO3C025954 vs. NCBI nr
Match: KAA0038829.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 94.0 bits (232), Expect = 1.7e-15
Identity = 93/229 (40.61%), Postives = 129/229 (56.33%), Query Frame = 0

Query: 8   EAEEKKAEAKEKKKAEEEKRKEEESLRRKKEEKKALREESAKREEERRKKEREKKKVTRR 67
           EA +K+    E+KK E+EKRK EE  ++KK+E +A R+E AK +    +  ++KK+ T  
Sbjct: 115 EASKKEV---ERKKVEDEKRKGEERKKQKKDEDRAQRKEEAKTKLAEIQTTKKKKQET-- 174

Query: 68  TPISAKCLKRKKKNVESLVETKTKLAEIQTAKKKKKETLMDQKFSQEIERMSPLKPRLRP 127
                  L    + VES+V T++K+AE Q   +  +  +M ++FS+EIE MSPL PR RP
Sbjct: 175 -------LASLSEQVESVV-TRSKVAEHQ---EVDRVDVMVEEFSREIEGMSPLGPRPRP 234

Query: 128 EELGLISVVQPKKGKNK-----------------------------TGALRHLGRLLNLL 187
           EE GL ++  PKK K+K                              G L     LLN L
Sbjct: 235 EEKGLTNIEFPKKSKSKRKAGTSRPKDIQRGNKMSAQKLDKLIKIEKGLLPFNDPLLNFL 294

Query: 188 YEPIKALKSEKIFMGETKVRLDIVNMFYARKYHPDDSYAIVEGEKMPFT 208
           Y  IK +K EK F+ ETKV+LDIV+MFY  K+H ++SY IVEGEK+ FT
Sbjct: 295 YGLIKTMKLEKFFIEETKVKLDIVDMFYVAKFHLNESYMIVEGEKVSFT 327

BLAST of MELO3C025954 vs. NCBI nr
Match: TYK25721.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 91.3 bits (225), Expect = 1.1e-14
Identity = 81/173 (46.82%), Postives = 111/173 (64.16%), Query Frame = 0

Query: 1   MKFVKELE-AEEKKAEAKEKKKAEEEKRKEEESLRRKKEEKKALREESAKREEERRKKER 60
           ++F+KELE A+ KK+E  E+KK+++EKRKEEE  ++KK+E++ L+EE     E R++K++
Sbjct: 159 LEFIKELEAAKRKKSEVVERKKSKDEKRKEEERKKQKKDEERTLQEE----WERRKRKKK 218

Query: 61  EKKKVTRRTPISAKCLKRKKKNVESLVETKTKLAEIQTAKKKKKETLMDQ---------- 120
           E++K  +      +  K KKKNV SLVETKTKLAE+QT KKKK+ETL  Q          
Sbjct: 219 EREKAYKEDEHLRQTFKEKKKNVTSLVETKTKLAEVQTTKKKKQETLAGQSEQVESVDTR 278

Query: 121 -----------------KFSQEIERMSPLKPRLRPEELGLISVVQPKKGKNKT 146
                            + S+EIE MSPLKPRLRPEE GLI+   PKK K+K+
Sbjct: 279 SKVIEHEEVDRVDVVAKELSREIEGMSPLKPRLRPEEQGLINTQLPKKRKSKS 327

BLAST of MELO3C025954 vs. ExPASy TrEMBL
Match: A0A5D3CKB6 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G001600 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 3.1e-28
Identity = 69/82 (84.15%), Postives = 77/82 (93.90%), Query Frame = 0

Query: 97  TAKKKKKETLMDQKFSQEIERMSPLKPRLRPEELGLISVVQPKKGKNKTGALRHLGRLLN 156
           ++KK+    ++ ++FSQEIERMSPLKPRLRPEELGLISVVQPKKGKNKTGALRHLGRLLN
Sbjct: 237 SSKKQDYHEVVAEEFSQEIERMSPLKPRLRPEELGLISVVQPKKGKNKTGALRHLGRLLN 296

Query: 157 LLYEPIKALKSEKIFMGETKVR 179
           LLYEPIKALKSEKIFMGETK+R
Sbjct: 297 LLYEPIKALKSEKIFMGETKMR 318

BLAST of MELO3C025954 vs. ExPASy TrEMBL
Match: A0A5A7V0F9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00260 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 3.1e-23
Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = 0

Query: 118 MSPLKPRLRPEELGLISVVQPKKGKNKTGALRHLGRLLNLLYEPIKALKSEKIFMGETKV 177
           MSPLKPRLRPEELGLISVVQPKKGKNKTGALRHLGRL NLLYEPIKALKSEKIFMGETK+
Sbjct: 1   MSPLKPRLRPEELGLISVVQPKKGKNKTGALRHLGRLPNLLYEPIKALKSEKIFMGETKM 60

Query: 178 R 179
           R
Sbjct: 61  R 61

BLAST of MELO3C025954 vs. ExPASy TrEMBL
Match: A0A5A7TBU7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold279G00120 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 8.0e-16
Identity = 93/229 (40.61%), Postives = 129/229 (56.33%), Query Frame = 0

Query: 8   EAEEKKAEAKEKKKAEEEKRKEEESLRRKKEEKKALREESAKREEERRKKEREKKKVTRR 67
           EA +K+    E+KK E+EKRK EE  ++KK+E +A R+E AK +    +  ++KK+ T  
Sbjct: 115 EASKKEV---ERKKVEDEKRKGEERKKQKKDEDRAQRKEEAKTKLAEIQTTKKKKQET-- 174

Query: 68  TPISAKCLKRKKKNVESLVETKTKLAEIQTAKKKKKETLMDQKFSQEIERMSPLKPRLRP 127
                  L    + VES+V T++K+AE Q   +  +  +M ++FS+EIE MSPL PR RP
Sbjct: 175 -------LASLSEQVESVV-TRSKVAEHQ---EVDRVDVMVEEFSREIEGMSPLGPRPRP 234

Query: 128 EELGLISVVQPKKGKNK-----------------------------TGALRHLGRLLNLL 187
           EE GL ++  PKK K+K                              G L     LLN L
Sbjct: 235 EEKGLTNIEFPKKSKSKRKAGTSRPKDIQRGNKMSAQKLDKLIKIEKGLLPFNDPLLNFL 294

Query: 188 YEPIKALKSEKIFMGETKVRLDIVNMFYARKYHPDDSYAIVEGEKMPFT 208
           Y  IK +K EK F+ ETKV+LDIV+MFY  K+H ++SY IVEGEK+ FT
Sbjct: 295 YGLIKTMKLEKFFIEETKVKLDIVDMFYVAKFHLNESYMIVEGEKVSFT 327

BLAST of MELO3C025954 vs. ExPASy TrEMBL
Match: A0A5D3DPW8 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00130 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 5.2e-15
Identity = 81/173 (46.82%), Postives = 111/173 (64.16%), Query Frame = 0

Query: 1   MKFVKELE-AEEKKAEAKEKKKAEEEKRKEEESLRRKKEEKKALREESAKREEERRKKER 60
           ++F+KELE A+ KK+E  E+KK+++EKRKEEE  ++KK+E++ L+EE     E R++K++
Sbjct: 159 LEFIKELEAAKRKKSEVVERKKSKDEKRKEEERKKQKKDEERTLQEE----WERRKRKKK 218

Query: 61  EKKKVTRRTPISAKCLKRKKKNVESLVETKTKLAEIQTAKKKKKETLMDQ---------- 120
           E++K  +      +  K KKKNV SLVETKTKLAE+QT KKKK+ETL  Q          
Sbjct: 219 EREKAYKEDEHLRQTFKEKKKNVTSLVETKTKLAEVQTTKKKKQETLAGQSEQVESVDTR 278

Query: 121 -----------------KFSQEIERMSPLKPRLRPEELGLISVVQPKKGKNKT 146
                            + S+EIE MSPLKPRLRPEE GLI+   PKK K+K+
Sbjct: 279 SKVIEHEEVDRVDVVAKELSREIEGMSPLKPRLRPEEQGLINTQLPKKRKSKS 327

BLAST of MELO3C025954 vs. ExPASy TrEMBL
Match: A0A5D3BXZ2 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00240 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 5.4e-12
Identity = 61/132 (46.21%), Postives = 79/132 (59.85%), Query Frame = 0

Query: 45  EESAKREEERRKKEREKKKVTRRTPISAKCLKRKKKNVESLVETKTKLAEIQTAKKKKKE 104
           +  A++E  R++K  E+ +  R+        K KKKNV+SL ETKTKL+EIQTAKKKK+E
Sbjct: 77  KHGAEKERRRKEKGHEEDESLRQV------FKEKKKNVKSLAETKTKLSEIQTAKKKKQE 136

Query: 105 TLMD---------------------------QKFSQEIERMSPLKPRLRPEELGLISVVQ 150
           TL +                           ++FSQEI+RMS L+PRLRP+E GL+SV Q
Sbjct: 137 TLANLSEQAESVATKNKAVARQEVNHLEVVVEEFSQEIKRMSSLEPRLRPKETGLVSVAQ 196

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
TYK11975.16.5e-2884.15Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuw... [more]
KAA0060804.16.3e-2396.72hypothetical protein E6C27_scaffold137G00260 [Cucumis melo var. makuwa][more]
KAA0066935.12.6e-1646.55hypothetical protein E6C27_scaffold550G00650 [Cucumis melo var. makuwa][more]
KAA0038829.11.7e-1540.61stress response protein NST1-like [Cucumis melo var. makuwa][more]
TYK25721.11.1e-1446.82stress response protein NST1-like [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A5D3CKB63.1e-2884.15Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cucumis melo var. mak... [more]
A0A5A7V0F93.1e-2396.72Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TBU78.0e-1640.61Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3DPW85.2e-1546.82Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5D3BXZ25.4e-1246.21Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 4..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025954.1MELO3C025954.1mRNA