MELO3C025954 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAATTCGTCAAGGAACTTGAGGCAGAAGAGAAGAAGGCTGAAGCAAAAGAGAAGAAGAAAGCTGAAGAGGAAAAGAGAAAAGAAGAAGAAAGTTTAAGAAGGAAAAAGGAAGAGAAAAAAGCCCTGCGAGAAGAAAGCGCTAAGCGAGAAGAAGAGAGGAGGAAGAAAGAAAGAGAAAAGAAAAAGGTCACAAGGAGGACGCCCATCTCTGCTAAGTGTTTAAAGAGAAAAAAGAAGAATGTTGAATCTTTGGTGGAGACCAAAACCAAATTGGCAGAGATCCAAACCGCTAAGAAAAAGAAAAAAGAGACACTCATGGACCAAAGTGAGCAAGTGGAAAGTGTAGTAGCAAGAAACAAGACTACCATGAGGTTGTGGCTGAAGAGTTTAGTCAAGAAATTGAGAGGATGAGTCCTTTGAAGCCAAGGCTAAGGCCTGAAGAACTAGGGCTCATAAGTGTCGTGCAACCGAAGAAAGGCAAGAATAAGACGGGGGCATTAAGGCACTTAGGTCGTTTGCTCAATTTGCTCTACGAACCCATTAAGGCACTTAAGTCGGAGAAGATTTTCATGGGTGAGACTAAGGTTAGATTGGACATTGTTAATATGTTTTATGCGAGGAAGTATCATCCGGATGATTCATACGCGATAGTGGAAGGGGAGAAGATGCCTTTTACCACATAA ATGAAATTCGTCAAGGAACTTGAGGCAGAAGAGAAGAAGGCTGAAGCAAAAGAGAAGAAGAAAGCTGAAGAGGAAAAGAGAAAAGAAGAAGAAAGTTTAAGAAGGAAAAAGGAAGAGAAAAAAGCCCTGCGAGAAGAAAGCGCTAAGCGAGAAGAAGAGAGGAGGAAGAAAGAAAGAGAAAAGAAAAAGGTCACAAGGAGGACGCCCATCTCTGCTAAGTGTTTAAAGAGAAAAAAGAAGAATGTTGAATCTTTGGTGGAGACCAAAACCAAATTGGCAGAGATCCAAACCGCTAAGAAAAAGAAAAAAGAGACACTCATGGACCAAAAGTTTAGTCAAGAAATTGAGAGGATGAGTCCTTTGAAGCCAAGGCTAAGGCCTGAAGAACTAGGGCTCATAAGTGTCGTGCAACCGAAGAAAGGCAAGAATAAGACGGGGGCATTAAGGCACTTAGGTCGTTTGCTCAATTTGCTCTACGAACCCATTAAGGCACTTAAGTCGGAGAAGATTTTCATGGGTGAGACTAAGGTTAGATTGGACATTGTTAATATGTTTTATGCGAGGAAGTATCATCCGGATGATTCATACGCGATAGTGGAAGGGGAGAAGATGCCTTTTACCACATAA ATGAAATTCGTCAAGGAACTTGAGGCAGAAGAGAAGAAGGCTGAAGCAAAAGAGAAGAAGAAAGCTGAAGAGGAAAAGAGAAAAGAAGAAGAAAGTTTAAGAAGGAAAAAGGAAGAGAAAAAAGCCCTGCGAGAAGAAAGCGCTAAGCGAGAAGAAGAGAGGAGGAAGAAAGAAAGAGAAAAGAAAAAGGTCACAAGGAGGACGCCCATCTCTGCTAAGTGTTTAAAGAGAAAAAAGAAGAATGTTGAATCTTTGGTGGAGACCAAAACCAAATTGGCAGAGATCCAAACCGCTAAGAAAAAGAAAAAAGAGACACTCATGGACCAAAAGTTTAGTCAAGAAATTGAGAGGATGAGTCCTTTGAAGCCAAGGCTAAGGCCTGAAGAACTAGGGCTCATAAGTGTCGTGCAACCGAAGAAAGGCAAGAATAAGACGGGGGCATTAAGGCACTTAGGTCGTTTGCTCAATTTGCTCTACGAACCCATTAAGGCACTTAAGTCGGAGAAGATTTTCATGGGTGAGACTAAGGTTAGATTGGACATTGTTAATATGTTTTATGCGAGGAAGTATCATCCGGATGATTCATACGCGATAGTGGAAGGGGAGAAGATGCCTTTTACCACATAA MKFVKELEAEEKKAEAKEKKKAEEEKRKEEESLRRKKEEKKALREESAKREEERRKKEREKKKVTRRTPISAKCLKRKKKNVESLVETKTKLAEIQTAKKKKKETLMDQKFSQEIERMSPLKPRLRPEELGLISVVQPKKGKNKTGALRHLGRLLNLLYEPIKALKSEKIFMGETKVRLDIVNMFYARKYHPDDSYAIVEGEKMPFTT Homology
BLAST of MELO3C025954 vs. NCBI nr
Match: TYK11975.1 (Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]) HSP 1 Score: 135.2 bits (339), Expect = 6.5e-28 Identity = 69/82 (84.15%), Postives = 77/82 (93.90%), Query Frame = 0
BLAST of MELO3C025954 vs. NCBI nr
Match: KAA0060804.1 (hypothetical protein E6C27_scaffold137G00260 [Cucumis melo var. makuwa]) HSP 1 Score: 118.6 bits (296), Expect = 6.3e-23 Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = 0
BLAST of MELO3C025954 vs. NCBI nr
Match: KAA0066935.1 (hypothetical protein E6C27_scaffold550G00650 [Cucumis melo var. makuwa]) HSP 1 Score: 96.7 bits (239), Expect = 2.6e-16 Identity = 54/116 (46.55%), Postives = 64/116 (55.17%), Query Frame = 0
BLAST of MELO3C025954 vs. NCBI nr
Match: KAA0038829.1 (stress response protein NST1-like [Cucumis melo var. makuwa]) HSP 1 Score: 94.0 bits (232), Expect = 1.7e-15 Identity = 93/229 (40.61%), Postives = 129/229 (56.33%), Query Frame = 0
BLAST of MELO3C025954 vs. NCBI nr
Match: TYK25721.1 (stress response protein NST1-like [Cucumis melo var. makuwa]) HSP 1 Score: 91.3 bits (225), Expect = 1.1e-14 Identity = 81/173 (46.82%), Postives = 111/173 (64.16%), Query Frame = 0
BLAST of MELO3C025954 vs. ExPASy TrEMBL
Match: A0A5D3CKB6 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G001600 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 3.1e-28 Identity = 69/82 (84.15%), Postives = 77/82 (93.90%), Query Frame = 0
BLAST of MELO3C025954 vs. ExPASy TrEMBL
Match: A0A5A7V0F9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00260 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 3.1e-23 Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = 0
BLAST of MELO3C025954 vs. ExPASy TrEMBL
Match: A0A5A7TBU7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold279G00120 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 8.0e-16 Identity = 93/229 (40.61%), Postives = 129/229 (56.33%), Query Frame = 0
BLAST of MELO3C025954 vs. ExPASy TrEMBL
Match: A0A5D3DPW8 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00130 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 5.2e-15 Identity = 81/173 (46.82%), Postives = 111/173 (64.16%), Query Frame = 0
BLAST of MELO3C025954 vs. ExPASy TrEMBL
Match: A0A5D3BXZ2 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00240 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 5.4e-12 Identity = 61/132 (46.21%), Postives = 79/132 (59.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
|