MELO3C025953 (gene) Melon (DHL92) v4

Overview


Name	MELO3C025953
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	protein TIC 40, chloroplastic-like isoform X2
Location	chr11: 13708419 .. 13712115 (+)
RNA-Seq Expression	MELO3C025953
Synteny	MELO3C025953

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGCCTCTCCAAATTTGCTGAGTCTTCCAGCGCCATTCGAAAACCTGCTGTCGTCGTCTTCTACATCCGTCGAAGCTTCGACGTCCGACTGAGTCTTCTGACCGAGTCATCAGCGTCACAGTTCACCCACTCTTCGACGGACACAGTCCCACCATCCCCAACAGTCCCTTCGACGACGCCGGTGAGTTCTTCACTTTCTTTTTTAGTTTCTTATCCATCCCTTTATCTCTTCCCTGTGCACATCCCACCATCACCACCAGTCCCACAACGTTCATGATGCCCAAAAATTAGATCTTCTGGAATTTTCTGTTGGTGAGGATTAAACGAATTTTGGAAGCACTTCTCTTCGCTTTTTCGTAAATGGTACATTATATAGATGAAAAAAAGAGAAGAAATTGGGAACAAAATTAAGAATAATTGCATCCGTTTGTTAGGGTAATATCTGTTTGATGATATTTTTTGAAGGCTTAGCAAAGGCTCGAAAGACGAAGGCATACTTTAAACGGTATCAGGTTAAATTCAAGAGAAGAAAGAGAAATTTCCGACTTCTTTTTGTTGTTTATATTCTCATGAGTCATTCAATAGTATAAAATTTCTTTTCATTTCATGAATGCTATAGGTGCTAAAAAGTAATTACATGCTTGCATTTCTTTTCTCATTGTCTTCTCATTTTCATCATCTTGGTCCATTGGGTTAGAAGTAGGACAGAACGACATCTTCTAAAGTTGTTTTTTCCCATATATAAAGTTTGAAGTATGGCTTTGCATTTAATCAATTTATAAGTAAAATATTTGAAGCATGTGATATAACACTATTCTTAATCATTACTCTCAGTAACAATATGAGTGGAAGCCCACAATGGAACGGTCACCTCAAGAATTCTTTGAAGAACTTTGATCTTAGTAGCCCTGAAGTTAAGCAGCAATTTGGTCAGTCAAGTTGATCTCTTATTTTGTATTTATTACTAGTTGTTTTATGGGTGTTAAATGACTTGAATACTATTCTGTTGGCGTTTGTTATGATGTCAGATATTTCATATATAGCTAAGATGATCATATTTGTGATTTTCTGTTATTGTTGCATTGCAATCATATATTCTTTGACTCTTAAAAAATTTGACCAACATTTGGTTGTTTTTCTGTCAATAATTGATGAGCTCGCAAGTTTTTGTTTAATTTTTATTCAGTTTTTTTTTATGATGTTGTTTGTTTCCCTTCTTGCTGAAATTGATTTAAATATATTTTTTGAAATTGAATTTTTAAAATCACGATTCATAAGTCTCAGCATTAATATTTCATTTGATAAATCAATATGTTTCGGTGAGTTGGTACTTTTTAGAAATGAGATTTTGAAACAATTTTTATGTAATTAGGAATAAAAACTATTTCCCCCATGTTTTTTGTGATATTTTCTCAATTAATTATTCATTTATATTAATATTTAGGCTTGCTCTTTATTTTTGTACTTTGACAGATCAAATTGGGCTTACACCTGAAGAAGTTATTTCCAAAATTATGGCCAATCCCGAAATTGCAATGGCATTTCAAAATCCAAGAGTTCAAGCAGCCATCATGGATGTATGTTCTACTTAAGGTTAATAAATTTTTGGTTCGAATCTAATATTTTGATTTTACTTTTTGCAATGTTGACAAAATCCACTAAGTATCACAAAGTATCAAAATGACAAAGAGGTACATTAAATCAGTATTGTATTTGCACTTCCATCTATCACTCGGCTTGTATAGAATCCAAACGACGTTAACATAAATTCAGAATTTCACTTTCTTGATTCTGGTGGAAGACCTCTTTTTGCTGATTGTTGGTATATATTTTATGTAGTTAAGTTCATTCTCAGCTTCAATTTATGCCTTTCTAGGTTCATTCACATCGCTTCTATTTGATAATTAGAAAACTGTGGAGTTTTGTTGGAACATTCATTTTTGTTGTGGTGTATGGCCTGTAGATCTATTGTTTAGCTATTTTTTCCGTCATTTTTGGCTTCGTGTTTCATGCATGCATCTGTGGATACCTTCTCATTCAATTCCTGCTAATGAAAGTTTCATCAATTAAAGAAAATAAACACATCACCAAAGCTTGAGGATAACTTAATTGCTTGAGACATATAGTATATGTCCGAGTTCAGAAATCCAAATTTCAACCATCCCATGATTAACTCTTAAAAGAAAAAACCCATTAATTATGTTCTTTCACACATGGGGTTGAGGGTACCCTTTTTGTTTGTTTTCGGATTTTGAGATTAATGTTTTAGGCTACCCTAAAGTGAAGGTTTTCGGATTTTGAGATTAATGTTTTAGGCTACCCTAAAGTGAAGGTTCTTATGGAGAAGATGGATCTGCGTTGGGTTGCTTCTCTTCTCTAATTTCTATTTTTTTCTTTCATTTTCTTCATTTTTTATGGAGATTGATTGGGGAGTAAATTGTTGTTAATTACATTCTGTCATTTGGAACATAGAGATTTTGCAATGTGGAGGTGTTTCTAGTTTGAGTGCGGTTGGACAGGCCGGCTAACATTATAAAAACAATAATGTGTATTTGTAATATTTCTCTTGAATCTCATATCTTGCAATTAAACATTGAGAATTATGCTCAGCAAAAATGATTGTTTGGTTTAGATATTTGCAGATGGCAGATTGGCATTTAATGGATTAAGCAAAACTGTAAAAAAGGTTGGACGGAGTTCAAAGGAAAGTTTGGTTTTGGAGCCTCTTTGTGATGAGGTACTTATAATTTCTTTCCATTTCGATGACTCATCAATCAAATGAATGAGTATCAGAGAATTATTATTCTATTAATACTTTAAAAAATACTATTCGTTTATAGGAGAGTGCAAAAAGGAAGAGGAGCTAAAGAACGCACTAGAGATACAAAGATATTTGAGAAGTTGACATAGTCGAAACAATTTGGCAACAGTAGACAATGACTCTTACTTGGCTCTTACTTTCAATCTTGACCTTTTTCTATGTCAGGTTCATCATCTACCAATAGATAATAAGATAGGATACAAGGACTTACCCAGTGGGTTGAATGGGTTTTCTATATTTGGGGAGGTCAAAAGGTGATTGTTGATGTTGATTCCAAAAGGTGATTGTTGCAACCCTCATCTTTAAGGCACAAAGGGCATATCGATGGAAACATACGACTCCTAAACTTCTTTTACATTTTTTCATGAGTATTTAGGCTATTCTGGTCAAGACTTCCACGATTTTAATTGGATACTAAACTTCTGCTTCCTTTTAATAGAAAAATTGATAGGATAATACCAAGGATTTTATCACCGTTAATAAAAGTTCTCCCAATTATTTGCCCTTGTTTCTCTTTACTATTTGAGTCTGCTTCTTACTTAAAATCCTGAAATTTTCTGTTTAATTTCATTACTATATTTTGATAATTTCGTTTCATCTTTGTTGGTCCCTAACCACCACCCTATTGTCATCATTATCATCACCTTTTTTTTCTTTGCAGCAAGGAATATGAAGCTTCCAATAAATGCCAAGTTAAAATTTAGCATATCCTTGCAAAACCTTTCACAACCAATGTCGCTGGCAGTAATGTATTTTGTATTGTAAACAATTTGGACTTTGTATATGTATTTAGCATTGTAAAAATTTGATGATAGATAAAACACTCATTTTTGCGTTTTATCTTGTTTCTTTTTACTTCTTTGATCAAATGTAGGT

mRNA sequence

ACGCCTCTCCAAATTTGCTGAGTCTTCCAGCGCCATTCGAAAACCTGCTGTCGTCGTCTTCTACATCCGTCGAAGCTTCGACGTCCGACTGAGTCTTCTGACCGAGTCATCAGCGTCACAGTTCACCCACTCTTCGACGGACACAGTCCCACCATCCCCAACAGTCCCTTCGACGACGCCGGCTTAGCAAAGGCTCGAAAGACGAAGGCATACTTTAAACGGTATCAGTAACAATATGAGTGGAAGCCCACAATGGAACGGTCACCTCAAGAATTCTTTGAAGAACTTTGATCTTAGTAGCCCTGAAGTTAAGCAGCAATTTGATCAAATTGGGCTTACACCTGAAGAAGTTATTTCCAAAATTATGGCCAATCCCGAAATTGCAATGGCATTTCAAAATCCAAGAGTTCAAGCAGCCATCATGGATATATTTGCAGATGGCAGATTGGCATTTAATGGATTAAGCAAAACTGTAAAAAAGGTTGGACGGAGTTCAAAGGAAAGTTTGGTTTTGGAGCCTCTTTGTGATGAGGTTCATCATCTACCAATAGATAATAAGATAGGATACAAGGACTTACCCAGTGGGTTGAATGGGTTTTCTATATTTGGGGAGGTCAAAAGGTGATTGTTGATGTTGATTCCAAAAGGTGATTGTTGCAACCCTCATCTTTAAGGCACAAAGGGCATATCGATGGAAACATACGACTCCTAAACTTCTTTTACATTTTTTCATGAGTATTTAGGCTATTCTGGTCAAGACTTCCACGATTTTAATTGGATACTAAACTTCTGCTTCCTTTTAATAGAAAAATTGATAGGATAATACCAAGGATTTTATCACCGTTAATAAAAGTTCTCCCAATTATTTGCCCTTGTTTCTCTTTACTATTTGAGTCTGCTTCTTACTTAAAATCCTGAAATTTTCTGTTTAATTTCATTACTATATTTTGATAATTTCGTTTCATCTTTGTTGGTCCCTAACCACCACCCTATTGTCATCATTATCATCACCTTTTTTTTCTTTGCAGCAAGGAATATGAAGCTTCCAATAAATGCCAAGTTAAAATTTAGCATATCCTTGCAAAACCTTTCACAACCAATGTCGCTGGCAGTAATGTATTTTGTATTGTAAACAATTTGGACTTTGTATATGTATTTAGCATTGTAAAAATTTGATGATAGATAAAACACTCATTTTTGCGTTTTATCTTGTTTCTTTTTACTTCTTTGATCAAATGTAGGT

Coding sequence (CDS)

ATGAGTGGAAGCCCACAATGGAACGGTCACCTCAAGAATTCTTTGAAGAACTTTGATCTTAGTAGCCCTGAAGTTAAGCAGCAATTTGATCAAATTGGGCTTACACCTGAAGAAGTTATTTCCAAAATTATGGCCAATCCCGAAATTGCAATGGCATTTCAAAATCCAAGAGTTCAAGCAGCCATCATGGATATATTTGCAGATGGCAGATTGGCATTTAATGGATTAAGCAAAACTGTAAAAAAGGTTGGACGGAGTTCAAAGGAAAGTTTGGTTTTGGAGCCTCTTTGTGATGAGGTTCATCATCTACCAATAGATAATAAGATAGGATACAAGGACTTACCCAGTGGGTTGAATGGGTTTTCTATATTTGGGGAGGTCAAAAGGTGA

Protein sequence

MSGSPQWNGHLKNSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIMDIFADGRLAFNGLSKTVKKVGRSSKESLVLEPLCDEVHHLPIDNKIGYKDLPSGLNGFSIFGEVKR

Homology

[Close]

BLAST of MELO3C025953 vs. ExPASy Swiss-Prot
Match: Q8GT66 (Protein TIC 40, chloroplastic OS=Pisum sativum OX=3888 GN=TIC40 PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.7e-21
Identity = 47/64 (73.44%), Postives = 58/64 (90.62%), Query Frame = 0


Query: 1   MSGSPQWNGHLKNSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA 60
           M G  +W+  + ++LKNFDL+SP+VKQQFDQIGL+P+EVISKIMANP++AMAFQNPRVQA
Sbjct: 338 MGGGTEWDSRMMDTLKNFDLNSPDVKQQFDQIGLSPQEVISKIMANPDVAMAFQNPRVQA 397

Query: 61  AIMD 65
           AIMD
Sbjct: 398 AIMD 401

[Close]

BLAST of MELO3C025953 vs. ExPASy Swiss-Prot
Match: Q9FMD5 (Protein TIC 40, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC40 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.2e-21
Identity = 48/64 (75.00%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 1   MSGSPQWNGHLKNSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA 60
           MSGS +W+  + ++LKNFDL+SPEVKQQF+QIGLTPEEVISKIM NP++AMAFQNPRVQA
Sbjct: 351 MSGSGEWDKRMTDTLKNFDLNSPEVKQQFNQIGLTPEEVISKIMENPDVAMAFQNPRVQA 410

Query: 61  AIMD 65
           A+M+
Sbjct: 411 ALME 414

[Close]

BLAST of MELO3C025953 vs. NCBI nr
Match: XP_008464160.1 (PREDICTED: uncharacterized protein LOC103502106 isoform X1 [Cucumis melo])

HSP 1 Score: 262.7 bits (670), Expect = 1.7e-66
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MSGSPQWNGHLKNSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA 60
           MSGSPQWNGHLKNSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA
Sbjct: 1   MSGSPQWNGHLKNSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA 60

Query: 61  AIMDIFADGRLAFNGLSKTVKKVGRSSKESLVLEPLCDEVHHLPIDNKIGYKDLPSGLNG 120
           AIMDIFADGRLAFNGLSKTVKKVGRSSKESLVLEPLCDEVHHLPIDNKIGYKDLPSGLNG
Sbjct: 61  AIMDIFADGRLAFNGLSKTVKKVGRSSKESLVLEPLCDEVHHLPIDNKIGYKDLPSGLNG 120

Query: 121 FSIFGEVKR 130
           FSIFGEVKR
Sbjct: 121 FSIFGEVKR 129

[Close]

BLAST of MELO3C025953 vs. NCBI nr
Match: XP_008464161.1 (PREDICTED: protein TIC 40, chloroplastic-like isoform X2 [Cucumis melo])

HSP 1 Score: 198.7 bits (504), Expect = 3.0e-47
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MSGSPQWNGHLKNSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA 60
           MSGSPQWNGHLKNSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA
Sbjct: 1   MSGSPQWNGHLKNSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA 60

Query: 61  AIMDIFADGRLAFNGLSKTVKKVGRSSKESLVLEPLCDE 100
           AIMDIFADGRLAFNGLSKTVKKVGRSSKESLVLEPLCDE
Sbjct: 61  AIMDIFADGRLAFNGLSKTVKKVGRSSKESLVLEPLCDE 99

[Close]

BLAST of MELO3C025953 vs. NCBI nr
Match: XP_008464162.1 (PREDICTED: protein TIC 40, chloroplastic-like isoform X3 [Cucumis melo])

HSP 1 Score: 198.7 bits (504), Expect = 3.0e-47
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MSGSPQWNGHLKNSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA 60
           MSGSPQWNGHLKNSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA
Sbjct: 1   MSGSPQWNGHLKNSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA 60

Query: 61  AIMDIFADGRLAFNGLSKTVKKVGRSSKESLVLEPLCDE 100
           AIMDIFADGRLAFNGLSKTVKKVGRSSKESLVLEPLCDE
Sbjct: 61  AIMDIFADGRLAFNGLSKTVKKVGRSSKESLVLEPLCDE 99

[Close]

BLAST of MELO3C025953 vs. NCBI nr
Match: XP_022141408.1 (protein TIC 40, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 121.7 bits (304), Expect = 4.6e-24
Identity = 60/64 (93.75%), Postives = 62/64 (96.88%), Query Frame = 0


Query: 1   MSGSPQWNGHLKNSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA 60
           MSGSPQW+G L +SLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA
Sbjct: 326 MSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA 385

Query: 61  AIMD 65
           AIMD
Sbjct: 386 AIMD 389

[Close]

BLAST of MELO3C025953 vs. NCBI nr
Match: XP_008463124.1 (PREDICTED: protein TIC 40, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 121.7 bits (304), Expect = 4.6e-24
Identity = 60/64 (93.75%), Postives = 62/64 (96.88%), Query Frame = 0


Query: 1   MSGSPQWNGHLKNSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA 60
           MSGSPQW+G L +SLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA
Sbjct: 321 MSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA 380

Query: 61  AIMD 65
           AIMD
Sbjct: 381 AIMD 384

[Close]

BLAST of MELO3C025953 vs. ExPASy TrEMBL
Match: A0A1S3CKU8 (uncharacterized protein LOC103502106 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502106 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 8.1e-67
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MSGSPQWNGHLKNSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA 60
           MSGSPQWNGHLKNSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA
Sbjct: 1   MSGSPQWNGHLKNSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA 60

Query: 61  AIMDIFADGRLAFNGLSKTVKKVGRSSKESLVLEPLCDEVHHLPIDNKIGYKDLPSGLNG 120
           AIMDIFADGRLAFNGLSKTVKKVGRSSKESLVLEPLCDEVHHLPIDNKIGYKDLPSGLNG
Sbjct: 61  AIMDIFADGRLAFNGLSKTVKKVGRSSKESLVLEPLCDEVHHLPIDNKIGYKDLPSGLNG 120

Query: 121 FSIFGEVKR 130
           FSIFGEVKR
Sbjct: 121 FSIFGEVKR 129

[Close]

BLAST of MELO3C025953 vs. ExPASy TrEMBL
Match: A0A1S3CKV0 (protein TIC 40, chloroplastic-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502106 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.4e-47
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MSGSPQWNGHLKNSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA 60
           MSGSPQWNGHLKNSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA
Sbjct: 1   MSGSPQWNGHLKNSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA 60

Query: 61  AIMDIFADGRLAFNGLSKTVKKVGRSSKESLVLEPLCDE 100
           AIMDIFADGRLAFNGLSKTVKKVGRSSKESLVLEPLCDE
Sbjct: 61  AIMDIFADGRLAFNGLSKTVKKVGRSSKESLVLEPLCDE 99

[Close]

BLAST of MELO3C025953 vs. ExPASy TrEMBL
Match: A0A1S3CLB3 (protein TIC 40, chloroplastic-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103502106 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.4e-47
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MSGSPQWNGHLKNSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA 60
           MSGSPQWNGHLKNSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA
Sbjct: 1   MSGSPQWNGHLKNSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA 60

Query: 61  AIMDIFADGRLAFNGLSKTVKKVGRSSKESLVLEPLCDE 100
           AIMDIFADGRLAFNGLSKTVKKVGRSSKESLVLEPLCDE
Sbjct: 61  AIMDIFADGRLAFNGLSKTVKKVGRSSKESLVLEPLCDE 99

[Close]

BLAST of MELO3C025953 vs. ExPASy TrEMBL
Match: A0A5D3C9U5 (Protein TIC 40 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold871G00040 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 2.2e-24
Identity = 60/64 (93.75%), Postives = 62/64 (96.88%), Query Frame = 0


Query: 1   MSGSPQWNGHLKNSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA 60
           MSGSPQW+G L +SLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA
Sbjct: 187 MSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA 246

Query: 61  AIMD 65
           AIMD
Sbjct: 247 AIMD 250

[Close]

BLAST of MELO3C025953 vs. ExPASy TrEMBL
Match: A0A5A7VET2 (Protein TIC 40 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G002380 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 2.2e-24
Identity = 60/64 (93.75%), Postives = 62/64 (96.88%), Query Frame = 0


Query: 1   MSGSPQWNGHLKNSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA 60
           MSGSPQW+G L +SLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA
Sbjct: 187 MSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA 246

Query: 61  AIMD 65
           AIMD
Sbjct: 247 AIMD 250

[Close]

BLAST of MELO3C025953 vs. TAIR 10
Match: AT5G16620.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 103.2 bits (256), Expect = 1.6e-22
Identity = 48/64 (75.00%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 1   MSGSPQWNGHLKNSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQA 60
           MSGS +W+  + ++LKNFDL+SPEVKQQF+QIGLTPEEVISKIM NP++AMAFQNPRVQA
Sbjct: 351 MSGSGEWDKRMTDTLKNFDLNSPEVKQQFNQIGLTPEEVISKIMENPDVAMAFQNPRVQA 410

Query: 61  AIMD 65
           A+M+
Sbjct: 411 ALME 414

The following BLAST results are available for this feature:

BLAST of MELO3C025953 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GT66	1.7e-21	73.44	Protein TIC 40, chloroplastic OS=Pisum sativum OX=3888 GN=TIC40 PE=1 SV=1	[more]
Q9FMD5	2.2e-21	75.00	Protein TIC 40, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC40 PE=1 SV=1	[more]

BLAST of MELO3C025953 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464160.1	1.7e-66	100.00	PREDICTED: uncharacterized protein LOC103502106 isoform X1 [Cucumis melo]	[more]
XP_008464161.1	3.0e-47	100.00	PREDICTED: protein TIC 40, chloroplastic-like isoform X2 [Cucumis melo]	[more]
XP_008464162.1	3.0e-47	100.00	PREDICTED: protein TIC 40, chloroplastic-like isoform X3 [Cucumis melo]	[more]
XP_022141408.1	4.6e-24	93.75	protein TIC 40, chloroplastic isoform X1 [Momordica charantia]	[more]
XP_008463124.1	4.6e-24	93.75	PREDICTED: protein TIC 40, chloroplastic isoform X1 [Cucumis melo]	[more]

BLAST of MELO3C025953 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CKU8	8.1e-67	100.00	uncharacterized protein LOC103502106 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CKV0	1.4e-47	100.00	protein TIC 40, chloroplastic-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A1S3CLB3	1.4e-47	100.00	protein TIC 40, chloroplastic-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A5D3C9U5	2.2e-24	93.75	Protein TIC 40 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold871G00040...	[more]
A0A5A7VET2	2.2e-24	93.75	Protein TIC 40 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G002380...	[more]

BLAST of MELO3C025953 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16620.1	1.6e-22	75.00	hydroxyproline-rich glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.260.100		coord: 36..81 e-value: 2.0E-10 score: 42.4
None	No IPR available	PANTHER	PTHR47296	PROTEIN TIC 40, CHLOROPLASTIC	coord: 1..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025953.1	MELO3C025953.1	mRNA