MELO3C025742.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C025742.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	LOB domain-containing protein
Location	chr11: 27708651 .. 27710410 (+)
RNA-Seq Expression	MELO3C025742.jh1
Synteny	MELO3C025742.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCATTCAAAATTAAAATCATAATTTTCAAACTTAACTCATTTCATATTCATACCCTTTTCTGTTTCCTCTATTTATATCTCTGTTTTCCCATTTCCAAATCCAAACGAAGCCCTCTCCGTTTCTTCTCTTCTTCTTCTTCTCCTCCTCCTCCTCCGTTCCTTTGCTCCGATAATCGGAAAATGGAAGGAAGTGACTCACTCACAATCACCACCGTTTCTTCAACTCCACTATCCCAATCTCCTTCTTCTTCTTCTTCTCCGGCACCACCGCCGCCCGTTATTCTCAGTCCATGTGCGGCCTGTAAGATTTTGCGACGCCGATGTGCCGAGCGATGTGTATTGGCTCCCTATTTCCCTCCCACTGAACCGGCGAAGTTCGCCATCGCTCATCGAGTTTTTGGCGCCAGTAATATCATCAAATTCCTGCAGGTCTTTTTCATTCGTCTTTTAATTTCTCTCATGTCTTGATCTCTGTTTTACTTTAGCTCTGAATTTCTAATTGTTCGGTTATTTTCAAGATTGTGTCAATGAATTAGGGCTGAAAATGTGCATTCATATGTTAGTTGTTACTAACTAACGATCTTGTTGCTATCCATGTTTGTTTTATATGCAATGGGATTTGGAGCATGATGAAATTAATTCTTAAGATTTTGTTTGATCCTAAACTTTCAGCCACTTAACCTACTAAATATCTCCATTTGGATTTCTATGCTGAACTTTAAATTATGTTTATAGAAAAATTATTCACATTATTTGTAAAACATTGTAACTTTTCAAACTTCCATAATTTGAAAAGTAGCCAAATAATCATCATATCAATACTTTAACACTCGTATGCTCCAATAACTTTTACACTCGTATGTGTTTATAATGACTATGACATTACCATATGTACCAACTAAAAAGCTTAGGTTGATGAAGTTCTTTCTAGCAAATTTAATTATATTAGTACTTTAACTCTCGTATGCGCCCCATTATGACTGCATCATTACCATAACTTCATATTCTCTTGTCAACCCAAATGCTTAAAACTGATGGATTCTTTCAAGTAAACTTAATTAATACCGATGCTTCATTTCCCATTTTCCCCTTATTTGAATAGCAAAATTCACAATACAAGATCCCTATGGGACAACCCACTTGTCATGAACTGAAATTCTTTGTTGGGGGATTGATTAAACAGGAACTGCCTGAATCTCAAAGGGCAGATGCAGTGAGCAGCTTGGTTTATGAAGCAAGTGCAAGGATTAGAGACCCTGTTTATGGGTCAGCAGGGGCCATTTGCCAACTCCAAAAGCAAGTCAATGAGCTTCAAGCCCAACTAGCCAAAGCTCAGGCAGAGGTTGTCAACATGCAATGCCAACAAGCCAATCTTGTGGCCTTTGTTTGCAGGGAATTGGCTCAATCTCATCAATCTTTTGATGAATTCAATGGCAGCCCACATAATGGATTATTACAGAGCATTAATCCTCCAAGTTACTTTGATGATAGCAATAATGTAAACTCGTTGTGGGAACCCCTTTGGACATGAATTTTATTTAGTTTTTTAGGTTTGTGGATGTATGGTGTTCGATAAAATGCTCCAACGAAGTTTCTCCAAACTCTCTTGAGAGCCAAATTTGAGGTTGTGGGAAGGAGAAACTTTGTGGAAAAAATACAACAGAAATTTTAGGCTCCATTTGGTTCCTGATTTATTTCATCCCTATGATTTTAAAAAACAACAGCCTATTTTAAAAATCAATAAATTGTCGTTTTCTTT

mRNA sequence

CCCATTCAAAATTAAAATCATAATTTTCAAACTTAACTCATTTCATATTCATACCCTTTTCTGTTTCCTCTATTTATATCTCTGTTTTCCCATTTCCAAATCCAAACGAAGCCCTCTCCGTTTCTTCTCTTCTTCTTCTTCTCCTCCTCCTCCTCCGTTCCTTTGCTCCGATAATCGGAAAATGGAAGGAAGTGACTCACTCACAATCACCACCGTTTCTTCAACTCCACTATCCCAATCTCCTTCTTCTTCTTCTTCTCCGGCACCACCGCCGCCCGTTATTCTCAGTCCATGTGCGGCCTGTAAGATTTTGCGACGCCGATGTGCCGAGCGATGTGTATTGGCTCCCTATTTCCCTCCCACTGAACCGGCGAAGTTCGCCATCGCTCATCGAGTTTTTGGCGCCAGTAATATCATCAAATTCCTGCAGGAACTGCCTGAATCTCAAAGGGCAGATGCAGTGAGCAGCTTGGTTTATGAAGCAAGTGCAAGGATTAGAGACCCTGTTTATGGGTCAGCAGGGGCCATTTGCCAACTCCAAAAGCAAGTCAATGAGCTTCAAGCCCAACTAGCCAAAGCTCAGGCAGAGGTTGTCAACATGCAATGCCAACAAGCCAATCTTGTGGCCTTTGTTTGCAGGGAATTGGCTCAATCTCATCAATCTTTTGATGAATTCAATGGCAGCCCACATAATGGATTATTACAGAGCATTAATCCTCCAAGTTACTTTGATGATAGCAATAATGTAAACTCGTTGTGGGAACCCCTTTGGACATGAATTTTATTTAGTTTTTTAGGTTTGTGGATGTATGGTGTTCGATAAAATGCTCCAACGAAGTTTCTCCAAACTCTCTTGAGAGCCAAATTTGAGGTTGTGGGAAGGAGAAACTTTGTGGAAAAAATACAACAGAAATTTTAGGCTCCATTTGGTTCCTGATTTATTTCATCCCTATGATTTTAAAAAACAACAGCCTATTTTAAAAATCAATAAATTGTCGTTTTCTTT

Coding sequence (CDS)

ATGGAAGGAAGTGACTCACTCACAATCACCACCGTTTCTTCAACTCCACTATCCCAATCTCCTTCTTCTTCTTCTTCTCCGGCACCACCGCCGCCCGTTATTCTCAGTCCATGTGCGGCCTGTAAGATTTTGCGACGCCGATGTGCCGAGCGATGTGTATTGGCTCCCTATTTCCCTCCCACTGAACCGGCGAAGTTCGCCATCGCTCATCGAGTTTTTGGCGCCAGTAATATCATCAAATTCCTGCAGGAACTGCCTGAATCTCAAAGGGCAGATGCAGTGAGCAGCTTGGTTTATGAAGCAAGTGCAAGGATTAGAGACCCTGTTTATGGGTCAGCAGGGGCCATTTGCCAACTCCAAAAGCAAGTCAATGAGCTTCAAGCCCAACTAGCCAAAGCTCAGGCAGAGGTTGTCAACATGCAATGCCAACAAGCCAATCTTGTGGCCTTTGTTTGCAGGGAATTGGCTCAATCTCATCAATCTTTTGATGAATTCAATGGCAGCCCACATAATGGATTATTACAGAGCATTAATCCTCCAAGTTACTTTGATGATAGCAATAATGTAAACTCGTTGTGGGAACCCCTTTGGACATGA

Protein sequence

MEGSDSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPPTEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPHNGLLQSINPPSYFDDSNNVNSLWEPLWT

Homology

[Close]

BLAST of MELO3C025742.jh1 vs. NCBI nr
Match: XP_008463908.1 (PREDICTED: LOB domain-containing protein 1-like [Cucumis melo] >KAA0035306.1 LOB domain-containing protein 1-like [Cucumis melo var. makuwa] >TYK14330.1 LOB domain-containing protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 386 bits (991), Expect = 4.86e-135
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MEGSDSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSDSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP
Sbjct: 1   MEGSDSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60

Query: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120
           TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ
Sbjct: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPHNGLLQSINPP 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPHNGLLQSINPP
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPHNGLLQSINPP 180

Query: 181 SYFDDSNNVNSLWEPLWT 198
           SYFDDSNNVNSLWEPLWT
Sbjct: 181 SYFDDSNNVNSLWEPLWT 198

[Close]

BLAST of MELO3C025742.jh1 vs. NCBI nr
Match: XP_004149555.1 (LOB domain-containing protein 1 [Cucumis sativus] >KGN47298.1 hypothetical protein Csa_022951 [Cucumis sativus])

HSP 1 Score: 375 bits (962), Expect = 1.38e-130
Identity = 192/200 (96.00%), Postives = 198/200 (99.00%), Query Frame = 0


Query: 1   MEGSDSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSD++T+TTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP
Sbjct: 1   MEGSDTITVTTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60

Query: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120
           +EPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASAR+RDPVYGSAGAICQLQ
Sbjct: 61  SEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARVRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSP--HNGLLQSIN 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSP  HNGLLQSI+
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPQSHNGLLQSIH 180

Query: 181 PPSYFDDSNNVNSLWEPLWT 198
           PPSYFDDSNNVNSLWEPLWT
Sbjct: 181 PPSYFDDSNNVNSLWEPLWT 200

[Close]

BLAST of MELO3C025742.jh1 vs. NCBI nr
Match: XP_038902542.1 (LOB domain-containing protein 1 [Benincasa hispida])

HSP 1 Score: 349 bits (895), Expect = 1.89e-120
Identity = 187/199 (93.97%), Postives = 192/199 (96.48%), Query Frame = 0


Query: 1   MEGSDSLTITTVSSTPLSQSPSSSSSPAP-PPPVILSPCAACKILRRRCAERCVLAPYFP 60
           MEGSDS  +TTVSSTPLSQSPSSSSS AP PPPV+LSPCAACKILRRRCAERCVLAPYFP
Sbjct: 1   MEGSDS--VTTVSSTPLSQSPSSSSSLAPSPPPVVLSPCAACKILRRRCAERCVLAPYFP 60

Query: 61  PTEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQL 120
           PTEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQL
Sbjct: 61  PTEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQL 120

Query: 121 QKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPHNGLLQSINP 180
           QKQVNELQAQLAKAQAEVVNMQCQQANLV+FVCRELAQSHQSFD+FNGSPHNGL QSI+P
Sbjct: 121 QKQVNELQAQLAKAQAEVVNMQCQQANLVSFVCRELAQSHQSFDDFNGSPHNGLFQSISP 180

Query: 181 PSYFDDSNNVNSLWEPLWT 198
            SYFDDSN VNSLWEPLWT
Sbjct: 181 -SYFDDSN-VNSLWEPLWT 195

[Close]

BLAST of MELO3C025742.jh1 vs. NCBI nr
Match: XP_022943961.1 (LOB domain-containing protein 1-like [Cucurbita moschata] >XP_022985541.1 LOB domain-containing protein 1 [Cucurbita maxima])

HSP 1 Score: 333 bits (855), Expect = 2.44e-114
Identity = 178/199 (89.45%), Postives = 184/199 (92.46%), Query Frame = 0


Query: 1   MEGSDSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSDS  I T+SSTP SQSPSSSSSPAPPPPV+LSPCAACKILRRRCAE CVLAPYFPP
Sbjct: 1   MEGSDS--IITLSSTPPSQSPSSSSSPAPPPPVVLSPCAACKILRRRCAEGCVLAPYFPP 60

Query: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120
           TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ
Sbjct: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQS-FDEFNGSPHNGLLQSINP 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQS FD+ N   H+GL  SI+ 
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSSFDDLNADSHSGLFHSISS 180

Query: 181 PSYFDDSNNVNSLWEPLWT 198
           PSYFDD+N VN LWEPLWT
Sbjct: 181 PSYFDDTN-VNPLWEPLWT 196

[Close]

BLAST of MELO3C025742.jh1 vs. NCBI nr
Match: XP_023512010.1 (LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 333 bits (854), Expect = 3.47e-114
Identity = 178/199 (89.45%), Postives = 184/199 (92.46%), Query Frame = 0


Query: 1   MEGSDSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSDS  I T+SSTP S SPSSSSSPAPPPPV+LSPCAACKILRRRCAE CVLAPYFPP
Sbjct: 1   MEGSDS--IITLSSTPPSPSPSSSSSPAPPPPVVLSPCAACKILRRRCAEGCVLAPYFPP 60

Query: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120
           TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ
Sbjct: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQS-FDEFNGSPHNGLLQSINP 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQS FD+ N   H+GL QSI+ 
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSSFDDLNADSHSGLFQSISS 180

Query: 181 PSYFDDSNNVNSLWEPLWT 198
           PSYFDD+N VN LWEPLWT
Sbjct: 181 PSYFDDTN-VNPLWEPLWT 196

[Close]

BLAST of MELO3C025742.jh1 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2)

HSP 1 Score: 214.5 bits (545), Expect = 1.1e-54
Identity = 125/216 (57.87%), Postives = 151/216 (69.91%), Query Frame = 0


Query: 11  TVSSTPLSQSPSSSSSPAPP--------PPVILSPCAACKILRRRCAERCVLAPYFPPTE 70
           T ++TP++ SPS +SSP PP        PPV+LSPCAACKILRRRCA++CVLAPYFPPT+
Sbjct: 22  TETTTPVN-SPSPTSSPPPPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLAPYFPPTD 81

Query: 71  PAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ 130
           PAKF IAHRVFGASNIIKFLQELPESQR DAV+S+VYEA AR+RDPVYG AGAI  LQ+Q
Sbjct: 82  PAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQ 141

Query: 131 VNELQAQLAKAQAEVVNMQCQQANLVAFV---------CRELAQSHQSF-------DEFN 190
           V+ELQAQLAK Q E+V MQ Q+++L+  +          +E  Q   SF       DEF 
Sbjct: 142 VSELQAQLAKTQVELVGMQLQRSSLLELIYNMEQTKLSVQEQGQQKMSFESSFESGDEFI 201

Query: 191 GSPHNGLLQSINPPSYFDDSNNVN----SLWEPLWT 199
            SP     +  N   + +D+NN N    S W+PLWT
Sbjct: 202 SSPD----EESNDLGFLEDNNNNNNSSMSWWDPLWT 232

[Close]

BLAST of MELO3C025742.jh1 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.4e-54
Identity = 121/197 (61.42%), Postives = 144/197 (73.10%), Query Frame = 0


Query: 5   DSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPPTEPA 64
           +S +  +V++TP+  S SSS  P+  P V+LSPCAACKILRRRCAERCVLAPYFPPT+PA
Sbjct: 2   ESKSDASVATTPIISS-SSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPA 61

Query: 65  KFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVN 124
           KF IAHRVFGASNIIKFLQELPESQR DAV+S+VYEA ARIRDPVYG AGAI  LQ+QV+
Sbjct: 62  KFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVS 121

Query: 125 ELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPHNGLLQSINPPSYFD 184
           ELQAQLAKAQ E+VNMQ Q++NL+  +     Q  Q  D  +           N   + +
Sbjct: 122 ELQAQLAKAQVEMVNMQFQRSNLLELIYNMDQQQKQEQDNMSFES--------NDLGFLE 181

Query: 185 DSNNVNS---LWEPLWT 199
           D +N NS    W+PLWT
Sbjct: 182 DKSNTNSSMLWWDPLWT 189

[Close]

BLAST of MELO3C025742.jh1 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 155.2 bits (391), Expect = 7.6e-37
Identity = 85/156 (54.49%), Postives = 107/156 (68.59%), Query Frame = 0


Query: 36  SPCAACKILRRRCAERCVLAPYFPPTEPAKFAIAHRVFGASNIIKFLQELPESQRADAVS 95
           SPCA+CK+LRRRCA+ C+ APYFPP +P KFAI H+VFGASN+ K LQELP  QRADAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 96  SLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCREL 155
           SLV+EA+AR+RDPVYG  GAI  LQ QV++LQ QLA AQAE++ +Q Q            
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQN--------EPT 126

Query: 156 AQSHQSFDEFNGSPHNGLLQSINPPSYFDDSNNVNS 192
            QSH    E +   H  LL + N  +  + +NN N+
Sbjct: 127 LQSHHQVLELD-QDHKALLLNNNNINNCNTNNNNNN 153

[Close]

BLAST of MELO3C025742.jh1 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.8e-36
Identity = 76/110 (69.09%), Postives = 91/110 (82.73%), Query Frame = 0


Query: 36  SPCAACKILRRRCAERCVLAPYFPPTEPAKFAIAHRVFGASNIIKFLQELPESQRADAVS 95
           SPCAACK+LRRRCA+ CV +PYFP  EP KFA  HRVFGASN+ K LQELP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 96  SLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQA 146
           S+VYEA+AR+RDPVYG  GAI  LQ+Q++ LQAQLA AQAEVV+++ +Q+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

[Close]

BLAST of MELO3C025742.jh1 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 137.9 bits (346), Expect = 1.3e-31
Identity = 68/118 (57.63%), Postives = 89/118 (75.42%), Query Frame = 0


Query: 30  PPPVI--LSPCAACKILRRRCAERCVLAPYFPPTEPAKFAIAHRVFGASNIIKFLQELPE 89
           PP  +  ++PCAACK+LRRRCA+ C  +PYF P EP KFA  H+VFGASN+ K L E+PE
Sbjct: 36  PPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPE 95

Query: 90  SQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQA 146
           SQRADA +SLVYEA+ R+RDPVYG  GAI  LQ+QV  LQA+L   ++E++  + ++A
Sbjct: 96  SQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA 153

[Close]

BLAST of MELO3C025742.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CSE3 (LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00590 PE=3 SV=1)

HSP 1 Score: 386 bits (991), Expect = 2.36e-135
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MEGSDSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSDSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP
Sbjct: 1   MEGSDSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60

Query: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120
           TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ
Sbjct: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPHNGLLQSINPP 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPHNGLLQSINPP
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPHNGLLQSINPP 180

Query: 181 SYFDDSNNVNSLWEPLWT 198
           SYFDDSNNVNSLWEPLWT
Sbjct: 181 SYFDDSNNVNSLWEPLWT 198

[Close]

BLAST of MELO3C025742.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CKA7 (LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501920 PE=3 SV=1)

HSP 1 Score: 386 bits (991), Expect = 2.36e-135
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MEGSDSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSDSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP
Sbjct: 1   MEGSDSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60

Query: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120
           TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ
Sbjct: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPHNGLLQSINPP 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPHNGLLQSINPP
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPHNGLLQSINPP 180

Query: 181 SYFDDSNNVNSLWEPLWT 198
           SYFDDSNNVNSLWEPLWT
Sbjct: 181 SYFDDSNNVNSLWEPLWT 198

[Close]

BLAST of MELO3C025742.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KCM5 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G290790 PE=3 SV=1)

HSP 1 Score: 375 bits (962), Expect = 6.68e-131
Identity = 192/200 (96.00%), Postives = 198/200 (99.00%), Query Frame = 0


Query: 1   MEGSDSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSD++T+TTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP
Sbjct: 1   MEGSDTITVTTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60

Query: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120
           +EPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASAR+RDPVYGSAGAICQLQ
Sbjct: 61  SEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARVRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSP--HNGLLQSIN 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSP  HNGLLQSI+
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPQSHNGLLQSIH 180

Query: 181 PPSYFDDSNNVNSLWEPLWT 198
           PPSYFDDSNNVNSLWEPLWT
Sbjct: 181 PPSYFDDSNNVNSLWEPLWT 200

[Close]

BLAST of MELO3C025742.jh1 vs. ExPASy TrEMBL
Match: A0A6J1J8I0 (LOB domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111483579 PE=3 SV=1)

HSP 1 Score: 333 bits (855), Expect = 1.18e-114
Identity = 178/199 (89.45%), Postives = 184/199 (92.46%), Query Frame = 0


Query: 1   MEGSDSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSDS  I T+SSTP SQSPSSSSSPAPPPPV+LSPCAACKILRRRCAE CVLAPYFPP
Sbjct: 1   MEGSDS--IITLSSTPPSQSPSSSSSPAPPPPVVLSPCAACKILRRRCAEGCVLAPYFPP 60

Query: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120
           TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ
Sbjct: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQS-FDEFNGSPHNGLLQSINP 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQS FD+ N   H+GL  SI+ 
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSSFDDLNADSHSGLFHSISS 180

Query: 181 PSYFDDSNNVNSLWEPLWT 198
           PSYFDD+N VN LWEPLWT
Sbjct: 181 PSYFDDTN-VNPLWEPLWT 196

[Close]

BLAST of MELO3C025742.jh1 vs. ExPASy TrEMBL
Match: A0A6J1FT49 (LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111448531 PE=3 SV=1)

HSP 1 Score: 333 bits (855), Expect = 1.18e-114
Identity = 178/199 (89.45%), Postives = 184/199 (92.46%), Query Frame = 0


Query: 1   MEGSDSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSDS  I T+SSTP SQSPSSSSSPAPPPPV+LSPCAACKILRRRCAE CVLAPYFPP
Sbjct: 1   MEGSDS--IITLSSTPPSQSPSSSSSPAPPPPVVLSPCAACKILRRRCAEGCVLAPYFPP 60

Query: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120
           TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ
Sbjct: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQS-FDEFNGSPHNGLLQSINP 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQS FD+ N   H+GL  SI+ 
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSSFDDLNADSHSGLFHSISS 180

Query: 181 PSYFDDSNNVNSLWEPLWT 198
           PSYFDD+N VN LWEPLWT
Sbjct: 181 PSYFDDTN-VNPLWEPLWT 196

[Close]

BLAST of MELO3C025742.jh1 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 )

HSP 1 Score: 214.5 bits (545), Expect = 7.5e-56
Identity = 125/216 (57.87%), Postives = 151/216 (69.91%), Query Frame = 0


Query: 11  TVSSTPLSQSPSSSSSPAPP--------PPVILSPCAACKILRRRCAERCVLAPYFPPTE 70
           T ++TP++ SPS +SSP PP        PPV+LSPCAACKILRRRCA++CVLAPYFPPT+
Sbjct: 22  TETTTPVN-SPSPTSSPPPPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLAPYFPPTD 81

Query: 71  PAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ 130
           PAKF IAHRVFGASNIIKFLQELPESQR DAV+S+VYEA AR+RDPVYG AGAI  LQ+Q
Sbjct: 82  PAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQ 141

Query: 131 VNELQAQLAKAQAEVVNMQCQQANLVAFV---------CRELAQSHQSF-------DEFN 190
           V+ELQAQLAK Q E+V MQ Q+++L+  +          +E  Q   SF       DEF 
Sbjct: 142 VSELQAQLAKTQVELVGMQLQRSSLLELIYNMEQTKLSVQEQGQQKMSFESSFESGDEFI 201

Query: 191 GSPHNGLLQSINPPSYFDDSNNVN----SLWEPLWT 199
            SP     +  N   + +D+NN N    S W+PLWT
Sbjct: 202 SSPD----EESNDLGFLEDNNNNNNSSMSWWDPLWT 232

[Close]

BLAST of MELO3C025742.jh1 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 )

HSP 1 Score: 214.2 bits (544), Expect = 9.8e-56
Identity = 121/197 (61.42%), Postives = 144/197 (73.10%), Query Frame = 0


Query: 5   DSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPPTEPA 64
           +S +  +V++TP+  S SSS  P+  P V+LSPCAACKILRRRCAERCVLAPYFPPT+PA
Sbjct: 2   ESKSDASVATTPIISS-SSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPA 61

Query: 65  KFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVN 124
           KF IAHRVFGASNIIKFLQELPESQR DAV+S+VYEA ARIRDPVYG AGAI  LQ+QV+
Sbjct: 62  KFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVS 121

Query: 125 ELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPHNGLLQSINPPSYFD 184
           ELQAQLAKAQ E+VNMQ Q++NL+  +     Q  Q  D  +           N   + +
Sbjct: 122 ELQAQLAKAQVEMVNMQFQRSNLLELIYNMDQQQKQEQDNMSFES--------NDLGFLE 181

Query: 185 DSNNVNS---LWEPLWT 199
           D +N NS    W+PLWT
Sbjct: 182 DKSNTNSSMLWWDPLWT 189

[Close]

BLAST of MELO3C025742.jh1 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 155.2 bits (391), Expect = 5.4e-38
Identity = 85/156 (54.49%), Postives = 107/156 (68.59%), Query Frame = 0


Query: 36  SPCAACKILRRRCAERCVLAPYFPPTEPAKFAIAHRVFGASNIIKFLQELPESQRADAVS 95
           SPCA+CK+LRRRCA+ C+ APYFPP +P KFAI H+VFGASN+ K LQELP  QRADAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 96  SLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCREL 155
           SLV+EA+AR+RDPVYG  GAI  LQ QV++LQ QLA AQAE++ +Q Q            
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQN--------EPT 126

Query: 156 AQSHQSFDEFNGSPHNGLLQSINPPSYFDDSNNVNS 192
            QSH    E +   H  LL + N  +  + +NN N+
Sbjct: 127 LQSHHQVLELD-QDHKALLLNNNNINNCNTNNNNNN 153

[Close]

BLAST of MELO3C025742.jh1 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 152.9 bits (385), Expect = 2.7e-37
Identity = 76/110 (69.09%), Postives = 91/110 (82.73%), Query Frame = 0


Query: 36  SPCAACKILRRRCAERCVLAPYFPPTEPAKFAIAHRVFGASNIIKFLQELPESQRADAVS 95
           SPCAACK+LRRRCA+ CV +PYFP  EP KFA  HRVFGASN+ K LQELP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 96  SLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQA 146
           S+VYEA+AR+RDPVYG  GAI  LQ+Q++ LQAQLA AQAEVV+++ +Q+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

[Close]

BLAST of MELO3C025742.jh1 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 137.9 bits (346), Expect = 8.9e-33
Identity = 68/118 (57.63%), Postives = 89/118 (75.42%), Query Frame = 0


Query: 30  PPPVI--LSPCAACKILRRRCAERCVLAPYFPPTEPAKFAIAHRVFGASNIIKFLQELPE 89
           PP  +  ++PCAACK+LRRRCA+ C  +PYF P EP KFA  H+VFGASN+ K L E+PE
Sbjct: 36  PPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPE 95

Query: 90  SQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQA 146
           SQRADA +SLVYEA+ R+RDPVYG  GAI  LQ+QV  LQA+L   ++E++  + ++A
Sbjct: 96  SQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA 153

The following BLAST results are available for this feature:

BLAST of MELO3C025742.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463908.1	4.86e-135	100.00	PREDICTED: LOB domain-containing protein 1-like [Cucumis melo] >KAA0035306.1 LOB...	[more]
XP_004149555.1	1.38e-130	96.00	LOB domain-containing protein 1 [Cucumis sativus] >KGN47298.1 hypothetical prote...	[more]
XP_038902542.1	1.89e-120	93.97	LOB domain-containing protein 1 [Benincasa hispida]	[more]
XP_022943961.1	2.44e-114	89.45	LOB domain-containing protein 1-like [Cucurbita moschata] >XP_022985541.1 LOB do...	[more]
XP_023512010.1	3.47e-114	89.45	LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C025742.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SK08	1.1e-54	57.87	LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 S...	[more]
Q9LQR0	1.4e-54	61.42	LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=...	[more]
Q8LBW3	7.6e-37	54.49	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q9SHE9	3.8e-36	69.09	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q8L5T5	1.3e-31	57.63	LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S...	[more]

BLAST of MELO3C025742.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CSE3	2.36e-135	100.00	LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3CKA7	2.36e-135	100.00	LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501920 PE=...	[more]
A0A0A0KCM5	6.68e-131	96.00	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G290790 PE=3 SV...	[more]
A0A6J1J8I0	1.18e-114	89.45	LOB domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111483579 PE=3...	[more]
A0A6J1FT49	1.18e-114	89.45	LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114485...	[more]

BLAST of MELO3C025742.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28500.1	7.5e-56	57.87	LOB domain-containing protein 11	[more]
AT1G07900.1	9.8e-56	61.42	LOB domain-containing protein 1	[more]
AT2G30130.1	5.4e-38	54.49	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G31320.1	2.7e-37	69.09	LOB domain-containing protein 4	[more]
AT2G40470.1	8.9e-33	57.63	LOB domain-containing protein 15	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 116..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 12..195
None	No IPR available	PANTHER	PTHR31301:SF141	LOB DOMAIN-CONTAINING PROTEIN 1-LIKE	coord: 12..195
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 37..134 e-value: 3.8E-41 score: 139.7
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 36..137 score: 26.143148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025742.jh1.t1	MELO3C025742.jh1.t1	mRNA