MELO3C025714.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C025714.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	WUSCHEL-related homeobox 3
Location	chr11: 27361755 .. 27363080 (-)
RNA-Seq Expression	MELO3C025714.jh1
Synteny	MELO3C025714.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAAATCTTTCTATATATACACACAAACACAAAACACAAAACTCTCACCTCCAAATTCCAAAAACAAACAAAAACAAAAGTTATGTCTCCATCAAGTATTACTCCTTCAAGATGGTGTCCAACACCAGAACAAGTGATGATTTTGGAAGAGATTTATAGAAATGGGCTTAAAACTCCTAATGCCACTCAAATTCAACATATTACTTCTCATCTTTCTTTCTATGGTAAAATTGAAGGCAAAAATGTTTTCTATTGGTTCCAAAATCACAAGGCTAGAGATCGCCAAAAGCTTAGGAGGAAACTCTATAAGCAGCTTCAACAACATCATTTCTTTATGAAACGACAACGTTTTGACGACGATCATGATCATCATCACTTCTTTCAATATTTCCTTCCTCACCATGATCCCCAACTACTCCCACAGCTTCCTTCTCCCTCTTCTCTTCAGGTACTTACTCTTTTCTTTGTTGACTTTATTCATATTCAAATGTTTGACTTTTAAGTTTTTTTTAGTACATTAAACTTAGGTAGAAAAATTGGAGTAATTTCAAAAGTCAAGGGAAATAATACATACTGATGACACAAGAAAGTTCTAATTGCACTCATCTTCATTGTATTCTGTTCTTTTATATATATGTATAAATTATTGAAAACTATGCAAAGATAAGTGTGGTTGGAGGTATAGAAAGTCAAAAGTATTCTTCTTATAATATTAATGTGTAAATGTTTTTTTTTTTTATGGTTTTTATTACATTAATGATGCTATGTTTGCTCCCCAAGGTTATTTATGCAGTGTAATGAATTAATGAGATTTTGTTCATGCAGAGAGAGCTGGGAGAAGAGGAGGCAGCGACGGAGGTGGAGGGTGGTGGAGGGAGGAGGTGGTTGGGCGGGGATGACGGAACGACGGTGGCGGAGGAAGATGGAGAAACGACATGTGGTAATGGGAGTTTAAGGACGTTGGAGTTGTTTCCGGTGAGAGGGAGTTGGGTGAAGGAGGAAGAAGGGACGAGTGGAAACGGTGGATGGGGAAATTAATGGAAATTAAATTAAAAAAGAATAAGAAAAAAGAAAATATTCAAGGGAAAAATAGGGTAGGGTCAGGCGTAGGGTAAGTAGTAGTTAGGGTTTTAAAATTGGGTGTGTCATAATAATTGTTATTGTAAAAATTTAGAAGGAGAAAAATCTGATTTGCAGTTTCACCTTTTCCATTACTTATATTCTGCCTGCCTCAACCAATCTCTCTCTCATTAATGGTGTCTTTCTTAAATATTTTTATTATTATGAATAGTATATTATTATTTTCATTATATCAATTTACAAAAC

mRNA sequence

ACAAATCTTTCTATATATACACACAAACACAAAACACAAAACTCTCACCTCCAAATTCCAAAAACAAACAAAAACAAAAGTTATGTCTCCATCAAGTATTACTCCTTCAAGATGGTGTCCAACACCAGAACAAGTGATGATTTTGGAAGAGATTTATAGAAATGGGCTTAAAACTCCTAATGCCACTCAAATTCAACATATTACTTCTCATCTTTCTTTCTATGGTAAAATTGAAGGCAAAAATGTTTTCTATTGGTTCCAAAATCACAAGGCTAGAGATCGCCAAAAGCTTAGGAGGAAACTCTATAAGCAGCTTCAACAACATCATTTCTTTATGAAACGACAACGTTTTGACGACGATCATGATCATCATCACTTCTTTCAATATTTCCTTCCTCACCATGATCCCCAACTACTCCCACAGCTTCCTTCTCCCTCTTCTCTTCAGAGAGAGCTGGGAGAAGAGGAGGCAGCGACGGAGGTGGAGGGTGGTGGAGGGAGGAGGTGGTTGGGCGGGGATGACGGAACGACGGTGGCGGAGGAAGATGGAGAAACGACATGTGGTAATGGGAGTTTAAGGACGTTGGAGTTGTTTCCGGTGAGAGGGAGTTGGGTGAAGGAGGAAGAAGGGACGAGTGGAAACGGTGGATGGGGAAATTAATGGAAATTAAATTAAAAAAGAATAAGAAAAAAGAAAATATTCAAGGGAAAAATAGGGTAGGGTCAGGCGTAGGGTAAGTAGTAGTTAGGGTTTTAAAATTGGGTGTGTCATAATAATTGTTATTGTAAAAATTTAGAAGGAGAAAAATCTGATTTGCAGTTTCACCTTTTCCATTACTTATATTCTGCCTGCCTCAACCAATCTCTCTCTCATTAATGGTGTCTTTCTTAAATATTTTTATTATTATGAATAGTATATTATTATTTTCATTATATCAATTTACAAAAC

Coding sequence (CDS)

ATGTCTCCATCAAGTATTACTCCTTCAAGATGGTGTCCAACACCAGAACAAGTGATGATTTTGGAAGAGATTTATAGAAATGGGCTTAAAACTCCTAATGCCACTCAAATTCAACATATTACTTCTCATCTTTCTTTCTATGGTAAAATTGAAGGCAAAAATGTTTTCTATTGGTTCCAAAATCACAAGGCTAGAGATCGCCAAAAGCTTAGGAGGAAACTCTATAAGCAGCTTCAACAACATCATTTCTTTATGAAACGACAACGTTTTGACGACGATCATGATCATCATCACTTCTTTCAATATTTCCTTCCTCACCATGATCCCCAACTACTCCCACAGCTTCCTTCTCCCTCTTCTCTTCAGAGAGAGCTGGGAGAAGAGGAGGCAGCGACGGAGGTGGAGGGTGGTGGAGGGAGGAGGTGGTTGGGCGGGGATGACGGAACGACGGTGGCGGAGGAAGATGGAGAAACGACATGTGGTAATGGGAGTTTAAGGACGTTGGAGTTGTTTCCGGTGAGAGGGAGTTGGGTGAAGGAGGAAGAAGGGACGAGTGGAAACGGTGGATGGGGAAATTAA

Protein sequence

MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHHDPQLLPQLPSPSSLQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRGSWVKEEEGTSGNGGWGN

Homology

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BLAST of MELO3C025714.jh1 vs. NCBI nr
Match: XP_008463857.1 (PREDICTED: WUSCHEL-related homeobox 3 [Cucumis melo])

HSP 1 Score: 392 bits (1006), Expect = 1.59e-137
Identity = 191/192 (99.48%), Postives = 191/192 (99.48%), Query Frame = 0


Query: 1   MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60
           MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ
Sbjct: 1   MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60

Query: 61  NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHHDPQLLPQLPSPSS 120
           NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHH PQLLPQLPSPSS
Sbjct: 61  NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHHVPQLLPQLPSPSS 120

Query: 121 LQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRGSWVKE 180
           LQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRGSWVKE
Sbjct: 121 LQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRGSWVKE 180

Query: 181 EEGTSGNGGWGN 192
           EEGTSGNGGWGN
Sbjct: 181 EEGTSGNGGWGN 192

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BLAST of MELO3C025714.jh1 vs. NCBI nr
Match: XP_004148244.1 (WUSCHEL-related homeobox 3 [Cucumis sativus] >KGN47336.1 hypothetical protein Csa_022936 [Cucumis sativus])

HSP 1 Score: 376 bits (965), Expect = 2.94e-131
Identity = 184/193 (95.34%), Postives = 188/193 (97.41%), Query Frame = 0


Query: 1   MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60
           MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ
Sbjct: 1   MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60

Query: 61  NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDD-DHDHHHFFQYFLPHHDPQLLPQLPSPS 120
           NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDD  HDHHHFFQYFLPHH PQLLPQLPSPS
Sbjct: 61  NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDHQHDHHHFFQYFLPHHVPQLLPQLPSPS 120

Query: 121 SLQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRGSWVK 180
           SLQRE+GEEEAATEVEGGGGRRW+GGD+GTTV EEDGETTCGNG+LRTLELFPVR SWVK
Sbjct: 121 SLQREVGEEEAATEVEGGGGRRWMGGDEGTTVEEEDGETTCGNGTLRTLELFPVRASWVK 180

Query: 181 EEEGTSGNGGWGN 192
           EEEGTSGNGGWGN
Sbjct: 181 EEEGTSGNGGWGN 193

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BLAST of MELO3C025714.jh1 vs. NCBI nr
Match: XP_038902731.1 (WUSCHEL-related homeobox 3-like [Benincasa hispida])

HSP 1 Score: 305 bits (782), Expect = 1.74e-103
Identity = 162/192 (84.38%), Postives = 167/192 (86.98%), Query Frame = 0


Query: 1   MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60
           MSPS ITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ
Sbjct: 1   MSPSGITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60

Query: 61  NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHHDPQLLPQLPSPSS 120
           NHKARDRQKLRRKLYKQLQQHHF MKR RFD+   H  FF YFLP H PQLLP  PSPS 
Sbjct: 61  NHKARDRQKLRRKLYKQLQQHHFLMKRHRFDE---HTQFFHYFLPQHVPQLLP-FPSPSH 120

Query: 121 LQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRGSWVKE 180
            Q+E GEEE ATEVEGG    W GGD+GTTVAEEDGETTC NG+LRTLELFPVR SW+KE
Sbjct: 121 -QKE-GEEEPATEVEGGR-TTWFGGDEGTTVAEEDGETTCRNGTLRTLELFPVRASWMKE 180

Query: 181 EEGTSGNGGWGN 192
           EEGTSGNGGW N
Sbjct: 181 EEGTSGNGGWMN 185

[Close]

BLAST of MELO3C025714.jh1 vs. NCBI nr
Match: XP_022944088.1 (putative WUSCHEL-related homeobox 2 [Cucurbita moschata])

HSP 1 Score: 281 bits (718), Expect = 9.43e-94
Identity = 150/196 (76.53%), Postives = 155/196 (79.08%), Query Frame = 0


Query: 1   MSPSSI----TPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVF 60
           MSP++     TPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLS YGKIEGKNVF
Sbjct: 1   MSPAAAAAAATPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVF 60

Query: 61  YWFQNHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHHDPQLLPQLP 120
           YWFQNHKARDRQKLRRKLYKQLQQHHFF+KRQRFDD    HHFF  FL HH   L P LP
Sbjct: 61  YWFQNHKARDRQKLRRKLYKQLQQHHFFIKRQRFDD----HHFFHCFLQHHQRFLPPLLP 120

Query: 121 SPSSLQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRGS 180
            P+  Q E GE    TEVEGGG       DDG  V EED ETTCGNG+LRTLELFPVR  
Sbjct: 121 LPTHFQGEGGEGRT-TEVEGGG-------DDGMAVGEEDAETTCGNGTLRTLELFPVRAG 180

Query: 181 WVKEEEGTSGNGGWGN 192
           WVKEEEG SGNGGWGN
Sbjct: 181 WVKEEEGGSGNGGWGN 184

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BLAST of MELO3C025714.jh1 vs. NCBI nr
Match: KAG6570743.1 (WUSCHEL-related homeobox 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 266 bits (679), Expect = 8.75e-88
Identity = 145/197 (73.60%), Postives = 150/197 (76.14%), Query Frame = 0


Query: 1   MSPSSI---TPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFY 60
           MSP++    TPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLS YGKIEGKNVFY
Sbjct: 1   MSPAAAAAATPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVFY 60

Query: 61  WFQNHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHHDPQLLPQ--L 120
           WFQNHKARDRQKLRRKLYKQLQQHHFF+KRQRFDD H  H F Q    HH  Q  P   L
Sbjct: 61  WFQNHKARDRQKLRRKLYKQLQQHHFFIKRQRFDDHHFFHCFLQQQQHHHHHQRFPPPLL 120

Query: 121 PSPSSLQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRG 180
           P P+  Q E       TEVEGGG       DDG  V EED ETTC NG+LRTLELFPVR 
Sbjct: 121 PLPTHFQGE----GRTTEVEGGG-------DDGMAVGEEDAETTCRNGTLRTLELFPVRA 180

Query: 181 SWVKEEEGTSGNGGWGN 192
            WVKEEEG SGNGGWGN
Sbjct: 181 GWVKEEEGGSGNGGWGN 186

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BLAST of MELO3C025714.jh1 vs. ExPASy Swiss-Prot
Match: Q9SIB4 (WUSCHEL-related homeobox 3 OS=Arabidopsis thaliana OX=3702 GN=WOX3 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.3e-29
Identity = 70/127 (55.12%), Postives = 86/127 (67.72%), Query Frame = 0


Query: 4   SSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHK 63
           S +  +RWCPTPEQ+MILEE+YR+G++TPNA QIQ IT+HL+FYG+IEGKNVFYWFQNHK
Sbjct: 2   SPVASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHK 61

Query: 64  ARDRQKLRRKLYKQL--QQHHFFMKRQRFD-----------------DDHD--HHHFFQY 110
           ARDRQKLR+KL KQL  QQH   ++ Q+                   D H+  HHH   +
Sbjct: 62  ARDRQKLRKKLAKQLHQQQHQLQLQLQQIKPKPISSMISQPVNKNIIDHHNPYHHHHHNH 121

[Close]

BLAST of MELO3C025714.jh1 vs. ExPASy Swiss-Prot
Match: Q5W7C3 (Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX2 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.1e-27
Identity = 69/113 (61.06%), Postives = 78/113 (69.03%), Query Frame = 0


Query: 9   SRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKARDRQ 68
           +RWCPTPEQ+M+LEE+YR GL+TPNA QIQ IT+HLS YG+IEGKNVFYWFQNHKARDRQ
Sbjct: 26  TRWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDRQ 85

Query: 69  KLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHHDPQLLPQL-PSPSS 121
           KLRR+L      HH       +     HHH          PQLLP L PS SS
Sbjct: 86  KLRRRL---CISHHLLSCAHYY-----HHHLAAAAAVVPPPQLLPPLHPSSSS 130

[Close]

BLAST of MELO3C025714.jh1 vs. ExPASy Swiss-Prot
Match: Q70UV1 (WUSCHEL-related homeobox 3A OS=Zea mays OX=4577 GN=WOX3A PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.0e-26
Identity = 55/77 (71.43%), Postives = 70/77 (90.91%), Query Frame = 0


Query: 7  TPS-RWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKAR 66
          TPS RWCPTPEQ+MILEE+YR+G++TPNA +IQ IT+HL++YG+IEGKNVFYWFQNHKAR
Sbjct: 4  TPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHKAR 63

Query: 67 DRQKLRRKLYKQLQQHH 83
          +RQ+LRR+L  + QQ +
Sbjct: 64 ERQRLRRRLCARHQQQY 80

[Close]

BLAST of MELO3C025714.jh1 vs. ExPASy Swiss-Prot
Match: Q6S3I3 (WUSCHEL-related homeobox 3B OS=Zea mays OX=4577 GN=WOX3B PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.6e-26
Identity = 56/83 (67.47%), Postives = 73/83 (87.95%), Query Frame = 0


Query: 7  TPS-RWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKAR 66
          TPS RWCPTPEQ+MILEE+YR+G++TPNA +IQ IT+HL++YG+IEGKNVFYWFQNHKAR
Sbjct: 4  TPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHKAR 63

Query: 67 DRQKLRRKLYKQLQQHHFFMKRQ 89
          +RQ+LRR+L  + QQ +   ++Q
Sbjct: 64 ERQRLRRRLCARHQQQYAQQQQQ 86

[Close]

BLAST of MELO3C025714.jh1 vs. ExPASy Swiss-Prot
Match: A2XZR3 (Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. indica OX=39946 GN=WOX2 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.7e-25
Identity = 59/90 (65.56%), Postives = 68/90 (75.56%), Query Frame = 0


Query: 9   SRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKARDRQ 68
           +RWCPTPEQ+M+LEE+YR GL+TPNA QIQ IT+HLS YG+IEGKNVFYWFQNHKARDRQ
Sbjct: 26  TRWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDRQ 85

Query: 69  KLRRKLYKQLQQHHFFMKRQRFDDDHDHHH 99
           KLRR+L      HH       +     HHH
Sbjct: 86  KLRRRL---CISHHLLSCAHYY-----HHH 107

[Close]

BLAST of MELO3C025714.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CK69 (WUSCHEL-related homeobox 3 OS=Cucumis melo OX=3656 GN=LOC103501892 PE=3 SV=1)

HSP 1 Score: 392 bits (1006), Expect = 7.68e-138
Identity = 191/192 (99.48%), Postives = 191/192 (99.48%), Query Frame = 0


Query: 1   MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60
           MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ
Sbjct: 1   MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60

Query: 61  NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHHDPQLLPQLPSPSS 120
           NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHH PQLLPQLPSPSS
Sbjct: 61  NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHHVPQLLPQLPSPSS 120

Query: 121 LQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRGSWVKE 180
           LQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRGSWVKE
Sbjct: 121 LQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRGSWVKE 180

Query: 181 EEGTSGNGGWGN 192
           EEGTSGNGGWGN
Sbjct: 181 EEGTSGNGGWGN 192

[Close]

BLAST of MELO3C025714.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KHT6 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G301060 PE=3 SV=1)

HSP 1 Score: 376 bits (965), Expect = 1.42e-131
Identity = 184/193 (95.34%), Postives = 188/193 (97.41%), Query Frame = 0


Query: 1   MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60
           MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ
Sbjct: 1   MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60

Query: 61  NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDD-DHDHHHFFQYFLPHHDPQLLPQLPSPS 120
           NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDD  HDHHHFFQYFLPHH PQLLPQLPSPS
Sbjct: 61  NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDHQHDHHHFFQYFLPHHVPQLLPQLPSPS 120

Query: 121 SLQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRGSWVK 180
           SLQRE+GEEEAATEVEGGGGRRW+GGD+GTTV EEDGETTCGNG+LRTLELFPVR SWVK
Sbjct: 121 SLQREVGEEEAATEVEGGGGRRWMGGDEGTTVEEEDGETTCGNGTLRTLELFPVRASWVK 180

Query: 181 EEEGTSGNGGWGN 192
           EEEGTSGNGGWGN
Sbjct: 181 EEEGTSGNGGWGN 193

[Close]

BLAST of MELO3C025714.jh1 vs. ExPASy TrEMBL
Match: A0A6J1FXP0 (putative WUSCHEL-related homeobox 2 OS=Cucurbita moschata OX=3662 GN=LOC111448632 PE=3 SV=1)

HSP 1 Score: 281 bits (718), Expect = 4.56e-94
Identity = 150/196 (76.53%), Postives = 155/196 (79.08%), Query Frame = 0


Query: 1   MSPSSI----TPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVF 60
           MSP++     TPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLS YGKIEGKNVF
Sbjct: 1   MSPAAAAAAATPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVF 60

Query: 61  YWFQNHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHHDPQLLPQLP 120
           YWFQNHKARDRQKLRRKLYKQLQQHHFF+KRQRFDD    HHFF  FL HH   L P LP
Sbjct: 61  YWFQNHKARDRQKLRRKLYKQLQQHHFFIKRQRFDD----HHFFHCFLQHHQRFLPPLLP 120

Query: 121 SPSSLQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRGS 180
            P+  Q E GE    TEVEGGG       DDG  V EED ETTCGNG+LRTLELFPVR  
Sbjct: 121 LPTHFQGEGGEGRT-TEVEGGG-------DDGMAVGEEDAETTCGNGTLRTLELFPVRAG 180

Query: 181 WVKEEEGTSGNGGWGN 192
           WVKEEEG SGNGGWGN
Sbjct: 181 WVKEEEGGSGNGGWGN 184

[Close]

BLAST of MELO3C025714.jh1 vs. ExPASy TrEMBL
Match: A0A5D2ZWI0 (Homeobox domain-containing protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A03G049700v1 PE=3 SV=1)

HSP 1 Score: 151 bits (382), Expect = 8.08e-43
Identity = 102/206 (49.51%), Postives = 118/206 (57.28%), Query Frame = 0


Query: 9   SRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKARDRQ 68
           SRWCPTPEQVMILEE+YR+G+KTPNATQIQ ITSHLSFYGKIEGKNVFYWFQNHKAR+RQ
Sbjct: 7   SRWCPTPEQVMILEEMYRSGVKTPNATQIQQITSHLSFYGKIEGKNVFYWFQNHKARERQ 66

Query: 69  KLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHHDPQLLPQLPSPSSLQRELGEE 128
           KLRRKL KQLQ      ++Q F      HH+F   LP    Q L    SP    +++G +
Sbjct: 67  KLRRKLSKQLQ----LQQQQLF------HHYFDS-LPSPPFQHLSYYNSPPPFPQQVGVD 126

Query: 129 EAATEVEGGGGRRW-----------------LGGDDGTTVAEEDGE---------TTCGN 188
           +AA   + G    W                  GGD    V               TT G 
Sbjct: 127 DAAAAAKQGMNYTWKLDVSERMDVDKSMMKIYGGDLLMMVDLSSPSLSSPCFFTTTTTGP 186

[Close]

BLAST of MELO3C025714.jh1 vs. ExPASy TrEMBL
Match: A0A6P4N8D5 (WUSCHEL-related homeobox 3-like OS=Gossypium arboreum OX=29729 GN=LOC108462738 PE=3 SV=1)

HSP 1 Score: 151 bits (381), Expect = 1.14e-42
Identity = 102/206 (49.51%), Postives = 117/206 (56.80%), Query Frame = 0


Query: 9   SRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKARDRQ 68
           SRWCPTPEQVMILEE+YR+G+KTPNATQIQ ITSHLSFYGKIEGKNVFYWFQNHKAR+RQ
Sbjct: 7   SRWCPTPEQVMILEEMYRSGVKTPNATQIQQITSHLSFYGKIEGKNVFYWFQNHKARERQ 66

Query: 69  KLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHHDPQLLPQLPSPSSLQRELGEE 128
           KLRRKL KQLQ      ++Q F      HH+F   LP    Q L    SP    +++G  
Sbjct: 67  KLRRKLTKQLQ----LQQQQLF------HHYFDS-LPSPPFQRLSYYNSPPPFPQQVGVH 126

Query: 129 EAATEVEGGGGRRW-----------------LGGDDGTTVAEEDGE---------TTCGN 188
           +AA   + G    W                  GGD    V               TT G 
Sbjct: 127 DAAAAAKQGMNYTWKLDVSERMDVDKSMMKIYGGDLLMMVDLSSPSLSSPCFFTTTTTGP 186

[Close]

BLAST of MELO3C025714.jh1 vs. TAIR 10
Match: AT2G28610.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 129.8 bits (325), Expect = 2.3e-30
Identity = 70/127 (55.12%), Postives = 86/127 (67.72%), Query Frame = 0


Query: 4   SSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHK 63
           S +  +RWCPTPEQ+MILEE+YR+G++TPNA QIQ IT+HL+FYG+IEGKNVFYWFQNHK
Sbjct: 2   SPVASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHK 61

Query: 64  ARDRQKLRRKLYKQL--QQHHFFMKRQRFD-----------------DDHD--HHHFFQY 110
           ARDRQKLR+KL KQL  QQH   ++ Q+                   D H+  HHH   +
Sbjct: 62  ARDRQKLRKKLAKQLHQQQHQLQLQLQQIKPKPISSMISQPVNKNIIDHHNPYHHHHHNH 121

[Close]

BLAST of MELO3C025714.jh1 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 )

HSP 1 Score: 102.1 bits (253), Expect = 5.2e-22
Identity = 46/72 (63.89%), Postives = 57/72 (79.17%), Query Frame = 0


Query: 3   PSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNH 62
           P  +  SRW PTP+Q+ +LEE+YR G +TP+A  IQ IT+ L  YGKIEGKNVFYWFQNH
Sbjct: 69  PPVMVSSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNH 128

Query: 63  KARDRQKLRRKL 75
           KAR+RQK RR++
Sbjct: 129 KARERQKRRRQM 140

[Close]

BLAST of MELO3C025714.jh1 vs. TAIR 10
Match: AT1G46480.1 (WUSCHEL related homeobox 4 )

HSP 1 Score: 98.6 bits (244), Expect = 5.8e-21
Identity = 44/64 (68.75%), Postives = 53/64 (82.81%), Query Frame = 0


Query: 9   SRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKARDRQ 68
           +RW PT EQ+ ILE +Y+ G++TPNA QI+HIT  L  YGKIEGKNVFYWFQNHKAR+RQ
Sbjct: 89  TRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQ 148

Query: 69  KLRR 73
           K +R
Sbjct: 149 KQKR 152

[Close]

BLAST of MELO3C025714.jh1 vs. TAIR 10
Match: AT2G01500.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 94.7 bits (234), Expect = 8.4e-20
Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 10  RWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKARDRQK 69
           RW PTPEQ+  LEE+YR+G +TP   QIQ I S L  YG+IEGKNVFYWFQNHKAR+R K
Sbjct: 61  RWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHKARERLK 120

Query: 70  LRRK 74
            RR+
Sbjct: 121 RRRR 124

[Close]

BLAST of MELO3C025714.jh1 vs. TAIR 10
Match: AT3G11260.1 (WUSCHEL related homeobox 5 )

HSP 1 Score: 94.0 bits (232), Expect = 1.4e-19
Identity = 46/73 (63.01%), Postives = 55/73 (75.34%), Query Frame = 0


Query: 10 RWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKARDRQK 69
          RW PT EQ+ IL +++R GL+TP   QIQ I++ LSFYGKIE KNVFYWFQNHKAR+RQK
Sbjct: 24 RWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQNHKARERQK 83

Query: 70 LRRKLYKQLQQHH 83
           RRK+      HH
Sbjct: 84 -RRKISIDFDHHH 95

The following BLAST results are available for this feature:

BLAST of MELO3C025714.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463857.1	1.59e-137	99.48	PREDICTED: WUSCHEL-related homeobox 3 [Cucumis melo]	[more]
XP_004148244.1	2.94e-131	95.34	WUSCHEL-related homeobox 3 [Cucumis sativus] >KGN47336.1 hypothetical protein Cs...	[more]
XP_038902731.1	1.74e-103	84.38	WUSCHEL-related homeobox 3-like [Benincasa hispida]	[more]
XP_022944088.1	9.43e-94	76.53	putative WUSCHEL-related homeobox 2 [Cucurbita moschata]	[more]
KAG6570743.1	8.75e-88	73.60	WUSCHEL-related homeobox 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MELO3C025714.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SIB4	3.3e-29	55.12	WUSCHEL-related homeobox 3 OS=Arabidopsis thaliana OX=3702 GN=WOX3 PE=1 SV=1	[more]
Q5W7C3	3.1e-27	61.06	Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q70UV1	2.0e-26	71.43	WUSCHEL-related homeobox 3A OS=Zea mays OX=4577 GN=WOX3A PE=2 SV=1	[more]
Q6S3I3	2.6e-26	67.47	WUSCHEL-related homeobox 3B OS=Zea mays OX=4577 GN=WOX3B PE=2 SV=1	[more]
A2XZR3	1.7e-25	65.56	Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. indica OX=39946 GN=WO...	[more]

BLAST of MELO3C025714.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CK69	7.68e-138	99.48	WUSCHEL-related homeobox 3 OS=Cucumis melo OX=3656 GN=LOC103501892 PE=3 SV=1	[more]
A0A0A0KHT6	1.42e-131	95.34	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G301060 PE...	[more]
A0A6J1FXP0	4.56e-94	76.53	putative WUSCHEL-related homeobox 2 OS=Cucurbita moschata OX=3662 GN=LOC11144863...	[more]
A0A5D2ZWI0	8.08e-43	49.51	Homeobox domain-containing protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A03...	[more]
A0A6P4N8D5	1.14e-42	49.51	WUSCHEL-related homeobox 3-like OS=Gossypium arboreum OX=29729 GN=LOC108462738 P...	[more]

BLAST of MELO3C025714.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28610.1	2.3e-30	55.12	Homeodomain-like superfamily protein	[more]
AT3G18010.1	5.2e-22	63.89	WUSCHEL related homeobox 1	[more]
AT1G46480.1	5.8e-21	68.75	WUSCHEL related homeobox 4	[more]
AT2G01500.1	8.4e-20	67.19	Homeodomain-like superfamily protein	[more]
AT3G11260.1	1.4e-19	63.01	WUSCHEL related homeobox 5	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 6..73 e-value: 4.6E-4 score: 27.5
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 9..68 e-value: 2.2E-17 score: 62.7
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 4..69 score: 9.620432
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 10..69 e-value: 3.84363E-4 score: 35.2969
None	No IPR available	GENE3D	1.10.10.60		coord: 10..78 e-value: 1.0E-8 score: 36.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..164
None	No IPR available	PANTHER	PTHR45940:SF24	WUSCHEL-RELATED HOMEOBOX 3	coord: 1..127
IPR044555	Protein WUSCHEL-like	PANTHER	PTHR45940	WUSCHEL-RELATED HOMEOBOX 1-RELATED	coord: 1..127
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 9..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025714.jh1.t1	MELO3C025714.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099402	plant organ development
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity