MELO3C025679 (gene) Melon (DHL92) v4

Overview
NameMELO3C025679
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr05: 3609874 .. 3610179 (-)
RNA-Seq ExpressionMELO3C025679
SyntenyMELO3C025679
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGCCACCAACTGAGACTGATACTAAAGGCTCAAGACGGCTGCACCTCGCCCTAGGGGTTACTTTTTCCCTCCTCTCAACCTCTATAACAGCCCTAGATCCCGTCCTCTAGAGAATAGACTATCAAGGAGTTGCAAGAAAAGTACCTAATGCGTCATTGGATAGCCACCAATCTAGTTTTCCATCGGCCTATAAAGAGAAGACAACTCTTTGTCTACGACTCGCCGAGTACACAGAAAAGACTTCTGATAAGTATGTTAAAAAAGGGTGGCTTAAGGATTTCTTTGGTGGGTCAAAGGAAAAATGA

mRNA sequence

ACGCCACCAACTGAGACTGATACTAAAGGCTCAAGACGGCTGCACCTCGCCCTAGGGGTTACTTTTTCCCTCCTCTCAACCTCTATAACAGCCCTAGATCCCGTCCTCTAGAGAATAGACTATCAAGGAGTTGCAAGAAAAGTACCTAATGCGTCATTGGATAGCCACCAATCTAGTTTTCCATCGGCCTATAAAGAGAAGACAACTCTTTGTCTACGACTCGCCGAGTACACAGAAAAGACTTCTGATAAGTATGTTAAAAAAGGGTGGCTTAAGGATTTCTTTGGTGGGTCAAAGGAAAAATGA

Coding sequence (CDS)

ATGCGTCATTGGATAGCCACCAATCTAGTTTTCCATCGGCCTATAAAGAGAAGACAACTCTTTGTCTACGACTCGCCGAGTACACAGAAAAGACTTCTGATAAGTATGTTAAAAAAGGGTGGCTTAAGGATTTCTTTGGTGGGTCAAAGGAAAAAT

Protein sequence

MRHWIATNLVFHRPIKRRQLFVYDSPSTQKRLLISMLKKGGLRISLVGQRKN
Homology
BLAST of MELO3C025679 vs. NCBI nr
Match: KAA0036653.1 (hypothetical protein E6C27_scaffold43953G00030 [Cucumis melo var. makuwa] >TYK22294.1 hypothetical protein E5676_scaffold76112G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 67.0 bits (162), Expect = 5.4e-08
Identity = 32/49 (65.31%), Postives = 37/49 (75.51%), Query Frame = 0

Query: 4  WIATNLVFHRPIKRRQLFVYDSPSTQKRLLISMLKKGGLRISLVGQRKN 53
          WIA NL+F R +K RQLFVY  P+ QK LLIS+LK+ GLRI  VG RKN
Sbjct: 31 WIAVNLLFERRLKTRQLFVYGKPNAQKSLLISLLKRAGLRIYSVGHRKN 79

BLAST of MELO3C025679 vs. NCBI nr
Match: KAA0036880.1 (hypothetical protein E6C27_scaffold47006G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 65.5 bits (158), Expect = 1.6e-07
Identity = 31/49 (63.27%), Postives = 36/49 (73.47%), Query Frame = 0

Query: 4   WIATNLVFHRPIKRRQLFVYDSPSTQKRLLISMLKKGGLRISLVGQRKN 53
           WIA NLVF R +K RQLF+Y  P+ QK L IS+LK+ GLRI  VG RKN
Sbjct: 191 WIAVNLVFERRLKTRQLFIYGRPNAQKSLFISLLKEAGLRIYSVGHRKN 239

BLAST of MELO3C025679 vs. NCBI nr
Match: TYK27131.1 (hypothetical protein E5676_scaffold78976G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 65.5 bits (158), Expect = 1.6e-07
Identity = 31/49 (63.27%), Postives = 36/49 (73.47%), Query Frame = 0

Query: 4  WIATNLVFHRPIKRRQLFVYDSPSTQKRLLISMLKKGGLRISLVGQRKN 53
          WIA NLVF R +K RQLF+Y  P+ QK L IS+LK+ GLRI  VG RKN
Sbjct: 31 WIAVNLVFERRLKTRQLFIYGRPNAQKSLFISLLKEAGLRIYSVGHRKN 79

BLAST of MELO3C025679 vs. NCBI nr
Match: KAA0048628.1 (hypothetical protein E6C27_scaffold49708G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 65.1 bits (157), Expect = 2.1e-07
Identity = 32/49 (65.31%), Postives = 39/49 (79.59%), Query Frame = 0

Query: 4  WIATNLVFHRPIKRRQLFVYDSPSTQKRLLISMLKKGGLRISLVGQRKN 53
          WIA+NL+F RPIK R LF+Y   +TQK LLIS+LKK GLRI  VG+R+N
Sbjct: 37 WIASNLLFERPIKTRLLFLYGRSNTQKTLLISLLKKIGLRIYSVGKRRN 85

BLAST of MELO3C025679 vs. ExPASy TrEMBL
Match: A0A5D3DFC6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76112G00020 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.6e-08
Identity = 32/49 (65.31%), Postives = 37/49 (75.51%), Query Frame = 0

Query: 4  WIATNLVFHRPIKRRQLFVYDSPSTQKRLLISMLKKGGLRISLVGQRKN 53
          WIA NL+F R +K RQLFVY  P+ QK LLIS+LK+ GLRI  VG RKN
Sbjct: 31 WIAVNLLFERRLKTRQLFVYGKPNAQKSLLISLLKRAGLRIYSVGHRKN 79

BLAST of MELO3C025679 vs. ExPASy TrEMBL
Match: A0A5A7T0J6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold47006G00040 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 7.7e-08
Identity = 31/49 (63.27%), Postives = 36/49 (73.47%), Query Frame = 0

Query: 4   WIATNLVFHRPIKRRQLFVYDSPSTQKRLLISMLKKGGLRISLVGQRKN 53
           WIA NLVF R +K RQLF+Y  P+ QK L IS+LK+ GLRI  VG RKN
Sbjct: 191 WIAVNLVFERRLKTRQLFIYGRPNAQKSLFISLLKEAGLRIYSVGHRKN 239

BLAST of MELO3C025679 vs. ExPASy TrEMBL
Match: A0A5D3DTX0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78976G00010 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 7.7e-08
Identity = 31/49 (63.27%), Postives = 36/49 (73.47%), Query Frame = 0

Query: 4  WIATNLVFHRPIKRRQLFVYDSPSTQKRLLISMLKKGGLRISLVGQRKN 53
          WIA NLVF R +K RQLF+Y  P+ QK L IS+LK+ GLRI  VG RKN
Sbjct: 31 WIAVNLVFERRLKTRQLFIYGRPNAQKSLFISLLKEAGLRIYSVGHRKN 79

BLAST of MELO3C025679 vs. ExPASy TrEMBL
Match: A0A5A7U0A7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold49708G00040 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.0e-07
Identity = 32/49 (65.31%), Postives = 39/49 (79.59%), Query Frame = 0

Query: 4  WIATNLVFHRPIKRRQLFVYDSPSTQKRLLISMLKKGGLRISLVGQRKN 53
          WIA+NL+F RPIK R LF+Y   +TQK LLIS+LKK GLRI  VG+R+N
Sbjct: 37 WIASNLLFERPIKTRLLFLYGRSNTQKTLLISLLKKIGLRIYSVGKRRN 85

BLAST of MELO3C025679 vs. ExPASy TrEMBL
Match: A0A426X903 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00028409 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 8.8e-04
Identity = 25/49 (51.02%), Postives = 31/49 (63.27%), Query Frame = 0

Query: 4  WIATNLVFHRPIKRRQLFVYDSPSTQKRLLISMLKKGGLRISLVGQRKN 53
          W+ATNL+F RPIK +QLF+Y  P+ QK L+  ML K  L I     R N
Sbjct: 46 WLATNLIFDRPIKTKQLFLYGKPNAQKTLMFEMLSK-VLNIYFASSRSN 93

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0036653.15.4e-0865.31hypothetical protein E6C27_scaffold43953G00030 [Cucumis melo var. makuwa] >TYK22... [more]
KAA0036880.11.6e-0763.27hypothetical protein E6C27_scaffold47006G00040 [Cucumis melo var. makuwa][more]
TYK27131.11.6e-0763.27hypothetical protein E5676_scaffold78976G00010 [Cucumis melo var. makuwa][more]
KAA0048628.12.1e-0765.31hypothetical protein E6C27_scaffold49708G00040 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DFC62.6e-0865.31Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7T0J67.7e-0863.27Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3DTX07.7e-0863.27Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U0A71.0e-0765.31Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A426X9038.8e-0451.02Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00028409 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025679.1MELO3C025679.1mRNA