MELO3C025653.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonstart_codonCDSpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTAGCAGAAAGTTCATAATGGTGGCATTGTTGGTGGTGGCCTCGGTGCTATGCCAAGCACACATGAGCTTGGGAATAAGAAAGTTATCCAACAAGGAAATGAAGATGGTTCCAATGGGGGTTGATGTTAATTATATGCTTCTCGGCGCTCTTCCGAAAGGCCCAACGCCCCCATCTGCCCCTAGTGAGCGAGGCAACCCTGCTCCTTTTAGTGATGGTGATCGAGTCTTGGTATCTGCTCCGAGTCCCGGAATTGGTCATCGTTAA ATGGGTAGCAGAAAGTTCATAATGGTGGCATTGTTGGTGGTGGCCTCGGTGCTATGCCAAGCACACATGAGCTTGGGAATAAGAAAGTTATCCAACAAGGAAATGAAGATGGTTCCAATGGGGGTTGATGTTAATTATATGCTTCTCGGCGCTCTTCCGAAAGGCCCAACGCCCCCATCTGCCCCTAGTGAGCGAGGCAACCCTGCTCCTTTTAGTGATGGTGATCGAGTCTTGGTATCTGCTCCGAGTCCCGGAATTGGTCATCGTTAA ATGGGTAGCAGAAAGTTCATAATGGTGGCATTGTTGGTGGTGGCCTCGGTGCTATGCCAAGCACACATGAGCTTGGGAATAAGAAAGTTATCCAACAAGGAAATGAAGATGGTTCCAATGGGGGTTGATGTTAATTATATGCTTCTCGGCGCTCTTCCGAAAGGCCCAACGCCCCCATCTGCCCCTAGTGAGCGAGGCAACCCTGCTCCTTTTAGTGATGGTGATCGAGTCTTGGTATCTGCTCCGAGTCCCGGAATTGGTCATCGTTAA MGSRKFIMVALLVVASVLCQAHMSLGIRKLSNKEMKMVPMGVDVNYMLLGALPKGPTPPSAPSERGNPAPFSDGDRVLVSAPSPGIGHR Homology
BLAST of MELO3C025653.jh1 vs. NCBI nr
Match: KAA0066754.1 (hypothetical protein E6C27_scaffold271G00930 [Cucumis melo var. makuwa] >TYK27901.1 hypothetical protein E5676_scaffold384G00860 [Cucumis melo var. makuwa]) HSP 1 Score: 175 bits (444), Expect = 3.89e-55 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0
BLAST of MELO3C025653.jh1 vs. NCBI nr
Match: KGN55050.1 (hypothetical protein Csa_012928 [Cucumis sativus]) HSP 1 Score: 164 bits (415), Expect = 1.03e-50 Identity = 84/89 (94.38%), Postives = 86/89 (96.63%), Query Frame = 0
BLAST of MELO3C025653.jh1 vs. NCBI nr
Match: KAG6607932.1 (hypothetical protein SDJN03_01274, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 76.3 bits (186), Expect = 5.53e-16 Identity = 41/74 (55.41%), Postives = 51/74 (68.92%), Query Frame = 0
BLAST of MELO3C025653.jh1 vs. NCBI nr
Match: DAD48182.1 (TPA_asm: hypothetical protein HUJ06_018119 [Nelumbo nucifera]) HSP 1 Score: 51.6 bits (122), Expect = 4.22e-06 Identity = 31/70 (44.29%), Postives = 38/70 (54.29%), Query Frame = 0
BLAST of MELO3C025653.jh1 vs. NCBI nr
Match: KAF8413711.1 (hypothetical protein HHK36_001703 [Tetracentron sinense]) HSP 1 Score: 49.7 bits (117), Expect = 2.94e-05 Identity = 30/74 (40.54%), Postives = 43/74 (58.11%), Query Frame = 0
BLAST of MELO3C025653.jh1 vs. ExPASy Swiss-Prot
Match: Q9FZ54 (Precursor of CEP13 OS=Arabidopsis thaliana OX=3702 GN=CEP13 PE=2 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 7.7e-05 Identity = 32/86 (37.21%), Postives = 45/86 (52.33%), Query Frame = 0
BLAST of MELO3C025653.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VHE0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00860 PE=4 SV=1) HSP 1 Score: 175 bits (444), Expect = 1.88e-55 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0
BLAST of MELO3C025653.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KZH3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G625050 PE=4 SV=1) HSP 1 Score: 164 bits (415), Expect = 5.01e-51 Identity = 84/89 (94.38%), Postives = 86/89 (96.63%), Query Frame = 0
BLAST of MELO3C025653.jh1 vs. ExPASy TrEMBL
Match: A0A5B7APD8 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_027968 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.75e-07 Identity = 34/89 (38.20%), Postives = 52/89 (58.43%), Query Frame = 0
BLAST of MELO3C025653.jh1 vs. ExPASy TrEMBL
Match: A0A6N2L486 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS113295 PE=4 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 9.02e-06 Identity = 25/44 (56.82%), Postives = 34/44 (77.27%), Query Frame = 0
BLAST of MELO3C025653.jh1 vs. ExPASy TrEMBL
Match: A0A178WKL7 ((thale cress) hypothetical protein OS=Arabidopsis thaliana OX=3702 GN=AXX17_At1g17760 PE=4 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 1.26e-04 Identity = 31/86 (36.05%), Postives = 46/86 (53.49%), Query Frame = 0
BLAST of MELO3C025653.jh1 vs. TAIR 10
Match: AT1G16950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis; Has 17 Blast hits to 17 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 47.8 bits (112), Expect = 5.4e-06 Identity = 32/86 (37.21%), Postives = 45/86 (52.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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