MELO3C025617.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C025617.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	E3 SUMO-protein ligase MMS21
Location	chr07: 4340172 .. 4343081 (-)
RNA-Seq Expression	MELO3C025617.jh1
Synteny	MELO3C025617.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGGTCATTGTAGTGAATAGAAAAAGAGCGAGGAAATATTATCTAAAATAGGCGTGCCTAAATCTTTTCTGTTTTTCCCCTCTATCGACGGATTTTCAAAACTCCGGGCGATTTTGTTTCCTCAAGCGGGTATTCTATATTTTCCCGCTCTAGCAATAGTTTCTGTTTCGAGAATCTCTTTTTCGAACGAATGGCATCCGCTTCCGATTCTCGATCTACCGGCGTCACCGGCAGAATCAAATCCGCCGCCACCATTATGCACTCCGAGAACCAATCCCTCCTTGCAGTAACTTGCTTAATACTACCCTCTTACTTTACTTCTATCTCTGCTTTCAATTTCTTGTTCGAGAAAATGAAGTTGTTTAACCTTGTTTTTAGCTTTAACATCTACATTTCGTGTTAGTTCACATGCGGTATTCCCTTCATTTTGCGCTTTGAACTGGGGTTTCCTAGATTTCTAAATGCTGAAACGTCCGGGTCGAGATTATCCTATTGAAAACAATGATTCATAAGGAATTTAACTAATGAATGATGATGATGGGTTATCTGTTAATTTTTTGTGATTGGATTTTATTGTCTTAATTTCAGGAATTGCGGAAGACGCTGATTATGATGAAGGAAATTGGGGTGGATTTGGAGAAGGAAAATCAGAACAAGATGGTATTGTGAATGATGGACCTTAATTTCGAGCATCACAAATGATTTCCATTTGTTACTTAGAAAAAGAATGTTGTTGGATTAGGATTAGATCTTGTAATAAAATACTAAGAAGTAAAGTCTACATAAATTTCAAATATGTTCTTAGGATTCTAACATTTTAGGAGTTTTTTTTTCCTTAGTTAATTGAAAATGAAATAGCAGATTGTATGCAACATGCTGCACATATATCTTGTTGGGACTTTCATTATAAACCAGCCACTTTGTCGAACCGTTCAAAATTCAAATATTTGTAATTCTTATTTCCATTTGGTGATTTTGCTACGCACATACATTTTTGTTTTTGACCCACTTTCTGTGGATGCCACGATATGTATAAGATTTATTGAACTGAATCCTTGTTTAAAAATTTTGATATTGGTTTCAGTAGGTTTACATTTATCTAATTTCTATACCATGTGCACTTTTTGGTGGATTTTCTGCTTCTGTCTATTAGATCCAATCTATGGGTAATTGTGAATCAGTGTTGATTGGAACTCTTAACCAATGATTTTAGGTCAAGGAGCTTGAAAAATCTATGGTTGAGCTGTTGAGTGCTTATGAAAACTGTAACAACTTTTCATCTGCAATTCAGTCGGTTGGAAATACATATGAACCAAAAGAAGAGGTGCTTGAATCTCTTTCCATGCTGAATTTTCCACTACACATTCTTTTCTTAATTTTCATCGTGTGGGTTCCTTCCTTTCCAGATGTAATATTTATATTTTATGTTGTTATGAAGTTGACAGATTTTGAGAAACTACTTGATGATGAAGTTGCAAAAGTGAGCGTAAATTCATCTTCAAATTTTGCGAACCATCCTATAATTCGGCAATTTAGAGAAGCTATTTGGGTATGCATCTTCATCTCCTTTTCTATGGTCTAGGAAGGGCCTTGGCACCCAGAAAAAAATAGATCAGAAAGCTAGGGGACAATATTTCCCTTTTCTTATCGGATCTGATTATGCAATAACTAGCCTGAAACTGTGAAAATGCTCAAAAGACAGTACATGAGTAGTAAAGAAGAGACTATTATACCTTTTTCTTGCAATTTCCAAATGTTTAGGAAGCATTTTATTGATCTTCCAATTGTAGATTTAGTTTTTTCCAATACTTTAGCCTATCTCCACGGTATTCCTGCAGAATGTTCACCATGCAGGACAACCAATGGCAGGTGAGGAGCAGGAAGACGTTGTGATGACCAGTACGCAGTGTAATCTATTGAATGTCACTTGCCCGTTAAGTGGAAAGCCTGTCACTGAATTAGCAGAACCCGTTCGCAGGTACATTGCAACTAAATATATTATGATAAAGGATAAAGAATTGGAATTCTTTCTGTTACTAGTGAAAAAGAAGTCTGCCGGTCCATCCGGTGTGCTACTTTGTTGTAGGTGCATGAAAAATGAAAATGGACTAGTCTGCTACTTTGATCTTCTTTTTCCTCTTCTTCTTATGTTACAGATCTGTCTTTAAATTATACTTTTTGTTCTTTGTACAAGTAATTGTTTTAGGTTGTGGAGAAGGTACATTCCCATGGATTTGGCCTTCTTGTTTTCTATTTTTCTATGGTTTCTGTTATGGATCAGTACAAGCGTGGGACATAGTGCATTTAAGCACTTCTATTAAGTCTCTTTATGTCTCTACCTTATGCAATTTGTAGTGCGGAATGCAAGCACATATACGAAAAGGCAGCCATAATGCAGTACCTTAATTCCAAGAAATCTCGCGCTCAATGCCCGGTTGCAGGTATTCGGATCTACCGCATTAGGTATACTAATACAGAATGTTTACATTGACTTGTGTCACTTGACCTCTCTGTCTTTACAGCCTGTCCTAAGATGTTGCAGCCCGATAAGGTTGTGCTTGATCCATTCTTAGAGATTGAAATCGATGAACTACGAAAGATGTCTAGGCATTCTGAGAGAATACAGGACTTCACAGAGCTTGATGCAGATTAACCACTGAATTACTTTCTTTTCCTTTTTTATATTTTGTTGTGTTTATTGGCATTGTCGCCGTCGGTCGTAGGGGTCAGTCTCTGGATCAAATGTTTTGGTTGGTAAGTTGAGGTAGTTGAGATGTATATGGTGGTATCTATAGTTTGTCTATATCGTCTCGAGTTGAATGGAGAAGTGTGGCTTCATTGACAAATTGTCATTGCCCTTTATATGTTGAATAAAAAATGGTGGTATGTACATTGAATTTGTGGCATTAATCAAAATAAAACAAACTACATTTTATTCATTTCATGGAGTAAAATGTAAAGCTTAGGGGCAATTGATTTTTTTGGCTCCATGAAGTCTTATTTTGGGAAAAGAGACCCTTTTGAAAACCAATTTATATGGTGATATTTTTAAATTAACTTTGCC

mRNA sequence

TTTTGGTCATTGTAGTGAATAGAAAAAGAGCGAGGAAATATTATCTAAAATAGGCGTGCCTAAATCTTTTCTGTTTTTCCCCTCTATCGACGGATTTTCAAAACTCCGGGCGATTTTGTTTCCTCAAGCGGGTATTCTATATTTTCCCGCTCTAGCAATAGTTTCTGTTTCGAGAATCTCTTTTTCGAACGAATGGCATCCGCTTCCGATTCTCGATCTACCGGCGTCACCGGCAGAATCAAATCCGCCGCCACCATTATGCACTCCGAGAACCAATCCCTCCTTGCAGAATTGCGGAAGACGCTGATTATGATGAAGGAAATTGGGGTGGATTTGGAGAAGGAAAATCAGAACAAGATGGTCAAGGAGCTTGAAAAATCTATGGTTGAGCTGTTGAGTGCTTATGAAAACTGTAACAACTTTTCATCTGCAATTCAGTCGGTTGGAAATACATATGAACCAAAAGAAGAGTTGACAGATTTTGAGAAACTACTTGATGATGAAGTTGCAAAAGTGAGCGTAAATTCATCTTCAAATTTTGCGAACCATCCTATAATTCGGCAATTTAGAGAAGCTATTTGGCCTATCTCCACGGTATTCCTGCAGAATGTTCACCATGCAGGACAACCAATGGCAGGTGAGGAGCAGGAAGACGTTGTGATGACCAGTACGCAGTGTAATCTATTGAATGTCACTTGCCCGTTAAGTGGAAAGCCTGTCACTGAATTAGCAGAACCCGTTCGCAGTGCGGAATGCAAGCACATATACGAAAAGGCAGCCATAATGCAGTACCTTAATTCCAAGAAATCTCGCGCTCAATGCCCGGTTGCAGCCTGTCCTAAGATGTTGCAGCCCGATAAGGTTGTGCTTGATCCATTCTTAGAGATTGAAATCGATGAACTACGAAAGATGTCTAGGCATTCTGAGAGAATACAGGACTTCACAGAGCTTGATGCAGATTAACCACTGAATTACTTTCTTTTCCTTTTTTATATTTTGTTGTGTTTATTGGCATTGTCGCCGTCGGTCGTAGGGGTCAGTCTCTGGATCAAATGTTTTGGTTGGTAAGTTGAGGTAGTTGAGATGTATATGGTGGTATCTATAGTTTGTCTATATCGTCTCGAGTTGAATGGAGAAGTGTGGCTTCATTGACAAATTGTCATTGCCCTTTATATGTTGAATAAAAAATGGTGGTATGTACATTGAATTTGTGGCATTAATCAAAATAAAACAAACTACATTTTATTCATTTCATGGAGTAAAATGTAAAGCTTAGGGGCAATTGATTTTTTTGGCTCCATGAAGTCTTATTTTGGGAAAAGAGACCCTTTTGAAAACCAATTTATATGGTGATATTTTTAAATTAACTTTGCC

Coding sequence (CDS)

ATGGCATCCGCTTCCGATTCTCGATCTACCGGCGTCACCGGCAGAATCAAATCCGCCGCCACCATTATGCACTCCGAGAACCAATCCCTCCTTGCAGAATTGCGGAAGACGCTGATTATGATGAAGGAAATTGGGGTGGATTTGGAGAAGGAAAATCAGAACAAGATGGTCAAGGAGCTTGAAAAATCTATGGTTGAGCTGTTGAGTGCTTATGAAAACTGTAACAACTTTTCATCTGCAATTCAGTCGGTTGGAAATACATATGAACCAAAAGAAGAGTTGACAGATTTTGAGAAACTACTTGATGATGAAGTTGCAAAAGTGAGCGTAAATTCATCTTCAAATTTTGCGAACCATCCTATAATTCGGCAATTTAGAGAAGCTATTTGGCCTATCTCCACGGTATTCCTGCAGAATGTTCACCATGCAGGACAACCAATGGCAGGTGAGGAGCAGGAAGACGTTGTGATGACCAGTACGCAGTGTAATCTATTGAATGTCACTTGCCCGTTAAGTGGAAAGCCTGTCACTGAATTAGCAGAACCCGTTCGCAGTGCGGAATGCAAGCACATATACGAAAAGGCAGCCATAATGCAGTACCTTAATTCCAAGAAATCTCGCGCTCAATGCCCGGTTGCAGCCTGTCCTAAGATGTTGCAGCCCGATAAGGTTGTGCTTGATCCATTCTTAGAGATTGAAATCGATGAACTACGAAAGATGTCTAGGCATTCTGAGAGAATACAGGACTTCACAGAGCTTGATGCAGATTAA

Protein sequence

MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKELEKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHPIIRQFREAIWPISTVFLQNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSAECKHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHSERIQDFTELDAD

Homology

[Close]

BLAST of MELO3C025617.jh1 vs. NCBI nr
Match: XP_008463706.1 (PREDICTED: E3 SUMO-protein ligase MMS21 [Cucumis melo] >KAA0066802.1 E3 SUMO-protein ligase MMS21 [Cucumis melo var. makuwa] >TYK27949.1 E3 SUMO-protein ligase MMS21 [Cucumis melo var. makuwa])

HSP 1 Score: 480 bits (1235), Expect = 1.42e-170
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 1   MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL 60
           MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL
Sbjct: 1   MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL 60

Query: 61  EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP 120
           EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP
Sbjct: 61  EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP 120

Query: 121 IIRQFREAIWNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSAEC 180
           IIRQFREAIWNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSAEC
Sbjct: 121 IIRQFREAIWNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSAEC 180

Query: 181 KHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHSERIQ 240
           KHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHSERIQ
Sbjct: 181 KHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHSERIQ 240

Query: 241 DFTELDAD 248
           DFTELDAD
Sbjct: 241 DFTELDAD 248

[Close]

BLAST of MELO3C025617.jh1 vs. NCBI nr
Match: XP_004146042.1 (E3 SUMO-protein ligase MMS21 [Cucumis sativus] >KGN55097.1 hypothetical protein Csa_012753 [Cucumis sativus])

HSP 1 Score: 460 bits (1184), Expect = 8.45e-163
Identity = 239/248 (96.37%), Postives = 242/248 (97.58%), Query Frame = 0


Query: 1   MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL 60
           MASASDSRSTGVTGRIKSAATIMHS+NQSLLAELRKTLIMMKEIGVDLEKE Q KMVKEL
Sbjct: 1   MASASDSRSTGVTGRIKSAATIMHSDNQSLLAELRKTLIMMKEIGVDLEKEKQYKMVKEL 60

Query: 61  EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP 120
           EKS+VELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVS +SSSNFANHP
Sbjct: 61  EKSIVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSESSSSNFANHP 120

Query: 121 IIRQFREAIWNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSAEC 180
           IIRQFREAIWNVHHAGQ MAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRS EC
Sbjct: 121 IIRQFREAIWNVHHAGQAMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSVEC 180

Query: 181 KHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHSERIQ 240
           KHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHS RIQ
Sbjct: 181 KHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHSGRIQ 240

Query: 241 DFTELDAD 248
           DFTELDAD
Sbjct: 241 DFTELDAD 248

[Close]

BLAST of MELO3C025617.jh1 vs. NCBI nr
Match: XP_038897059.1 (E3 SUMO-protein ligase MMS21 isoform X1 [Benincasa hispida])

HSP 1 Score: 423 bits (1088), Expect = 3.60e-148
Identity = 216/248 (87.10%), Postives = 231/248 (93.15%), Query Frame = 0


Query: 1   MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL 60
           MASASDSRS GV+GRIKSAATIMHSENQSLLAELRK LIMMKEIGV+LE++NQ++MVKEL
Sbjct: 1   MASASDSRSNGVSGRIKSAATIMHSENQSLLAELRKALIMMKEIGVELERDNQSRMVKEL 60

Query: 61  EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP 120
           E S+VELLS YENCNNFS AIQSVGN YEPKEELTDF KLLDDEVAKVS +SSSN  NH 
Sbjct: 61  ENSVVELLSTYENCNNFSLAIQSVGNIYEPKEELTDFGKLLDDEVAKVSQDSSSNLMNHS 120

Query: 121 IIRQFREAIWNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSAEC 180
           IIRQFREA+WNVHHAGQPM GEE+ED+VMTSTQCNLLNVTCPLSGKPV EL EPVRSAEC
Sbjct: 121 IIRQFREAVWNVHHAGQPMPGEEKEDIVMTSTQCNLLNVTCPLSGKPVIELTEPVRSAEC 180

Query: 181 KHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHSERIQ 240
           KH+YEKAAIMQYL SKKSRAQCPVAACPKMLQ DKVV DPFL+IEIDELRK+SRHS+RIQ
Sbjct: 181 KHVYEKAAIMQYLKSKKSRAQCPVAACPKMLQSDKVVPDPFLQIEIDELRKISRHSDRIQ 240

Query: 241 DFTELDAD 248
           DFTELDAD
Sbjct: 241 DFTELDAD 248

[Close]

BLAST of MELO3C025617.jh1 vs. NCBI nr
Match: XP_022941288.1 (E3 SUMO-protein ligase MMS21 [Cucurbita moschata])

HSP 1 Score: 412 bits (1058), Expect = 1.34e-143
Identity = 210/248 (84.68%), Postives = 228/248 (91.94%), Query Frame = 0


Query: 1   MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL 60
           MAS S+S STGV+ RIKSAATIM+SENQSLLAELRK+LIMMKEIGV+LE++NQ++MVKEL
Sbjct: 1   MASTSNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVELERDNQSRMVKEL 60

Query: 61  EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP 120
           E S+VELL  YE C+NFSSAIQSVGN YEP+EELTDFEKLLDDEVAKVS NSSSN  NH 
Sbjct: 61  ENSVVELLGTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDDEVAKVSENSSSNLQNHS 120

Query: 121 IIRQFREAIWNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSAEC 180
           IIRQFREAIWNVHHAGQPM GEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRS EC
Sbjct: 121 IIRQFREAIWNVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSTEC 180

Query: 181 KHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHSERIQ 240
           KH+YEK AIMQYL SK+SRAQCPVAACPKMLQP+KV+ DPFL IEIDELRK S+HS RIQ
Sbjct: 181 KHVYEKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSKHSVRIQ 240

Query: 241 DFTELDAD 248
           DFTE+DAD
Sbjct: 241 DFTEVDAD 248

[Close]

BLAST of MELO3C025617.jh1 vs. NCBI nr
Match: XP_023525588.1 (E3 SUMO-protein ligase MMS21 [Cucurbita pepo subsp. pepo] >KAG7037426.1 E3 SUMO-protein ligase MMS21 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 411 bits (1057), Expect = 1.90e-143
Identity = 210/248 (84.68%), Postives = 228/248 (91.94%), Query Frame = 0


Query: 1   MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL 60
           MAS S+S STGV+ RIKSAATIM+SENQSLLAELRK+LIMMKEIGVDLE++NQ++MVKEL
Sbjct: 1   MASTSNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVDLERDNQSRMVKEL 60

Query: 61  EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP 120
           E S+VELL  YE C+NFSSAIQSVGN YEP+EELTDFEKLLD+EVAKVS NSSSN  NH 
Sbjct: 61  ENSVVELLGTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDNEVAKVSENSSSNLQNHS 120

Query: 121 IIRQFREAIWNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSAEC 180
           IIRQFREAIWNVHHAGQPM GEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRS EC
Sbjct: 121 IIRQFREAIWNVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSTEC 180

Query: 181 KHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHSERIQ 240
           KH+YEK AIMQYL SK+SRAQCPVAACPKMLQP+KV+ DPFL IEIDELRK S+HS RIQ
Sbjct: 181 KHVYEKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSKHSVRIQ 240

Query: 241 DFTELDAD 248
           DFTE+DAD
Sbjct: 241 DFTEVDAD 248

[Close]

BLAST of MELO3C025617.jh1 vs. ExPASy Swiss-Prot
Match: Q8GYH7 (E3 SUMO-protein ligase MMS21 OS=Arabidopsis thaliana OX=3702 GN=MMS21 PE=1 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 4.5e-71
Identity = 137/244 (56.15%), Postives = 181/244 (74.18%), Query Frame = 0


Query: 4   ASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKELEKS 63
           AS S S GV GRI++A+ ++ S+N S LA++RK + MMK I V LEKENQ   VK+LE S
Sbjct: 2   ASASSSDGVAGRIQNASLVLVSDNSSTLADIRKAVAMMKNIAVQLEKENQTDKVKDLENS 61

Query: 64  MVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHPIIR 123
           + ELL  + +CN+ S+AIQSV N Y+P E+LTDF+KLLDDE  K+    SS   N  ++R
Sbjct: 62  VAELLDLHSDCNHRSTAIQSVANRYQPVEQLTDFKKLLDDEFTKLKATPSSVPQNDHLMR 121

Query: 124 QFREAIWNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSAECKHI 183
           QFREA+WNVHHAG+PM G++ ED+VMTSTQC LLN+TCPLSGKPVTELA+PVRS +C+H+
Sbjct: 122 QFREAVWNVHHAGEPMPGDDDEDIVMTSTQCPLLNMTCPLSGKPVTELADPVRSMDCRHV 181

Query: 184 YEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHSER---IQ 243
           YEK+ I+ Y+ +  + A CPVA C   LQ  KV+ D  L+ EI+E+R +++ S R   I+
Sbjct: 182 YEKSVILHYIVNNPN-ANCPVAGCRGKLQNSKVICDAMLKFEIEEMRSLNKQSNRAEVIE 241

Query: 244 DFTE 245
           DFTE
Sbjct: 242 DFTE 244

[Close]

BLAST of MELO3C025617.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DWX9 (E3 SUMO-protein ligase MMS21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001530 PE=3 SV=1)

HSP 1 Score: 480 bits (1235), Expect = 6.87e-171
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 1   MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL 60
           MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL
Sbjct: 1   MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL 60

Query: 61  EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP 120
           EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP
Sbjct: 61  EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP 120

Query: 121 IIRQFREAIWNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSAEC 180
           IIRQFREAIWNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSAEC
Sbjct: 121 IIRQFREAIWNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSAEC 180

Query: 181 KHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHSERIQ 240
           KHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHSERIQ
Sbjct: 181 KHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHSERIQ 240

Query: 241 DFTELDAD 248
           DFTELDAD
Sbjct: 241 DFTELDAD 248

[Close]

BLAST of MELO3C025617.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CLF9 (E3 SUMO-protein ligase MMS21 OS=Cucumis melo OX=3656 GN=LOC103501788 PE=3 SV=1)

HSP 1 Score: 480 bits (1235), Expect = 6.87e-171
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 1   MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL 60
           MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL
Sbjct: 1   MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL 60

Query: 61  EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP 120
           EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP
Sbjct: 61  EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP 120

Query: 121 IIRQFREAIWNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSAEC 180
           IIRQFREAIWNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSAEC
Sbjct: 121 IIRQFREAIWNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSAEC 180

Query: 181 KHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHSERIQ 240
           KHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHSERIQ
Sbjct: 181 KHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHSERIQ 240

Query: 241 DFTELDAD 248
           DFTELDAD
Sbjct: 241 DFTELDAD 248

[Close]

BLAST of MELO3C025617.jh1 vs. ExPASy TrEMBL
Match: A0A0A0L3C3 (SP-RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G628940 PE=3 SV=1)

HSP 1 Score: 460 bits (1184), Expect = 4.09e-163
Identity = 239/248 (96.37%), Postives = 242/248 (97.58%), Query Frame = 0


Query: 1   MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL 60
           MASASDSRSTGVTGRIKSAATIMHS+NQSLLAELRKTLIMMKEIGVDLEKE Q KMVKEL
Sbjct: 1   MASASDSRSTGVTGRIKSAATIMHSDNQSLLAELRKTLIMMKEIGVDLEKEKQYKMVKEL 60

Query: 61  EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP 120
           EKS+VELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVS +SSSNFANHP
Sbjct: 61  EKSIVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSESSSSNFANHP 120

Query: 121 IIRQFREAIWNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSAEC 180
           IIRQFREAIWNVHHAGQ MAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRS EC
Sbjct: 121 IIRQFREAIWNVHHAGQAMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSVEC 180

Query: 181 KHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHSERIQ 240
           KHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHS RIQ
Sbjct: 181 KHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHSGRIQ 240

Query: 241 DFTELDAD 248
           DFTELDAD
Sbjct: 241 DFTELDAD 248

[Close]

BLAST of MELO3C025617.jh1 vs. ExPASy TrEMBL
Match: A0A6J1FRP6 (E3 SUMO-protein ligase MMS21 OS=Cucurbita moschata OX=3662 GN=LOC111446631 PE=3 SV=1)

HSP 1 Score: 412 bits (1058), Expect = 6.49e-144
Identity = 210/248 (84.68%), Postives = 228/248 (91.94%), Query Frame = 0


Query: 1   MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL 60
           MAS S+S STGV+ RIKSAATIM+SENQSLLAELRK+LIMMKEIGV+LE++NQ++MVKEL
Sbjct: 1   MASTSNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVELERDNQSRMVKEL 60

Query: 61  EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP 120
           E S+VELL  YE C+NFSSAIQSVGN YEP+EELTDFEKLLDDEVAKVS NSSSN  NH 
Sbjct: 61  ENSVVELLGTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDDEVAKVSENSSSNLQNHS 120

Query: 121 IIRQFREAIWNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSAEC 180
           IIRQFREAIWNVHHAGQPM GEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRS EC
Sbjct: 121 IIRQFREAIWNVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSTEC 180

Query: 181 KHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHSERIQ 240
           KH+YEK AIMQYL SK+SRAQCPVAACPKMLQP+KV+ DPFL IEIDELRK S+HS RIQ
Sbjct: 181 KHVYEKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSKHSVRIQ 240

Query: 241 DFTELDAD 248
           DFTE+DAD
Sbjct: 241 DFTEVDAD 248

[Close]

BLAST of MELO3C025617.jh1 vs. ExPASy TrEMBL
Match: A0A6J1IXZ2 (E3 SUMO-protein ligase MMS21 OS=Cucurbita maxima OX=3661 GN=LOC111480943 PE=3 SV=1)

HSP 1 Score: 409 bits (1051), Expect = 8.12e-143
Identity = 208/244 (85.25%), Postives = 226/244 (92.62%), Query Frame = 0


Query: 5   SDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKELEKSM 64
           S+S STGV+ RIKSAATIM+SENQSLLAELRK+LIMMKEIGVDLE++NQ++MVKELE S+
Sbjct: 7   SNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVDLERDNQSRMVKELENSV 66

Query: 65  VELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHPIIRQ 124
           VELLS YE C+NFSSAIQSVGN YEP+EELTDFEKLLD+EVAKVS NSSSN  NH IIRQ
Sbjct: 67  VELLSTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDNEVAKVSENSSSNLQNHSIIRQ 126

Query: 125 FREAIWNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSAECKHIY 184
           FREAIWNVHHAGQPM GEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRS ECKH+Y
Sbjct: 127 FREAIWNVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSTECKHVY 186

Query: 185 EKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHSERIQDFTE 244
           EK AIMQYL SK+SRAQCPVAACPKMLQP+KV+ DPFL IEIDELRK S+HS RIQDFTE
Sbjct: 187 EKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSKHSVRIQDFTE 246

Query: 245 LDAD 248
           +DAD
Sbjct: 247 VDAD 250

[Close]

BLAST of MELO3C025617.jh1 vs. TAIR 10
Match: AT3G15150.1 (RING/U-box superfamily protein )

HSP 1 Score: 269.2 bits (687), Expect = 3.2e-72
Identity = 137/244 (56.15%), Postives = 181/244 (74.18%), Query Frame = 0


Query: 4   ASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKELEKS 63
           AS S S GV GRI++A+ ++ S+N S LA++RK + MMK I V LEKENQ   VK+LE S
Sbjct: 2   ASASSSDGVAGRIQNASLVLVSDNSSTLADIRKAVAMMKNIAVQLEKENQTDKVKDLENS 61

Query: 64  MVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHPIIR 123
           + ELL  + +CN+ S+AIQSV N Y+P E+LTDF+KLLDDE  K+    SS   N  ++R
Sbjct: 62  VAELLDLHSDCNHRSTAIQSVANRYQPVEQLTDFKKLLDDEFTKLKATPSSVPQNDHLMR 121

Query: 124 QFREAIWNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSAECKHI 183
           QFREA+WNVHHAG+PM G++ ED+VMTSTQC LLN+TCPLSGKPVTELA+PVRS +C+H+
Sbjct: 122 QFREAVWNVHHAGEPMPGDDDEDIVMTSTQCPLLNMTCPLSGKPVTELADPVRSMDCRHV 181

Query: 184 YEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHSER---IQ 243
           YEK+ I+ Y+ +  + A CPVA C   LQ  KV+ D  L+ EI+E+R +++ S R   I+
Sbjct: 182 YEKSVILHYIVNNPN-ANCPVAGCRGKLQNSKVICDAMLKFEIEEMRSLNKQSNRAEVIE 241

Query: 244 DFTE 245
           DFTE
Sbjct: 242 DFTE 244

The following BLAST results are available for this feature:

BLAST of MELO3C025617.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463706.1	1.42e-170	100.00	PREDICTED: E3 SUMO-protein ligase MMS21 [Cucumis melo] >KAA0066802.1 E3 SUMO-pro...	[more]
XP_004146042.1	8.45e-163	96.37	E3 SUMO-protein ligase MMS21 [Cucumis sativus] >KGN55097.1 hypothetical protein ...	[more]
XP_038897059.1	3.60e-148	87.10	E3 SUMO-protein ligase MMS21 isoform X1 [Benincasa hispida]	[more]
XP_022941288.1	1.34e-143	84.68	E3 SUMO-protein ligase MMS21 [Cucurbita moschata]	[more]
XP_023525588.1	1.90e-143	84.68	E3 SUMO-protein ligase MMS21 [Cucurbita pepo subsp. pepo] >KAG7037426.1 E3 SUMO-...	[more]

BLAST of MELO3C025617.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYH7	4.5e-71	56.15	E3 SUMO-protein ligase MMS21 OS=Arabidopsis thaliana OX=3702 GN=MMS21 PE=1 SV=1	[more]

BLAST of MELO3C025617.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DWX9	6.87e-171	100.00	E3 SUMO-protein ligase MMS21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3CLF9	6.87e-171	100.00	E3 SUMO-protein ligase MMS21 OS=Cucumis melo OX=3656 GN=LOC103501788 PE=3 SV=1	[more]
A0A0A0L3C3	4.09e-163	96.37	SP-RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G62894...	[more]
A0A6J1FRP6	6.49e-144	84.68	E3 SUMO-protein ligase MMS21 OS=Cucurbita moschata OX=3662 GN=LOC111446631 PE=3 ...	[more]
A0A6J1IXZ2	8.12e-143	85.25	E3 SUMO-protein ligase MMS21 OS=Cucurbita maxima OX=3661 GN=LOC111480943 PE=3 SV...	[more]

BLAST of MELO3C025617.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15150.1	3.2e-72	56.15	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 50..70
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 167..239
IPR004181	Zinc finger, MIZ-type	PFAM	PF11789	zf-Nse	coord: 154..215 e-value: 1.2E-14 score: 54.0
IPR004181	Zinc finger, MIZ-type	CDD	cd16651	SPL-RING_NSE2	coord: 168..236 e-value: 1.1307E-24 score: 91.5372
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 161..249 e-value: 2.2E-19 score: 71.5
IPR026846	E3 SUMO-protein ligase Nse2 (Mms21)	PANTHER	PTHR21330	UNCHARACTERIZED	coord: 10..246

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025617.jh1.t2	MELO3C025617.jh1.t2	mRNA
MELO3C025617.jh1.t1	MELO3C025617.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000724	double-strand break repair via homologous recombination
cellular_component	GO:0030915	Smc5-Smc6 complex
molecular_function	GO:0019789	SUMO transferase activity
molecular_function	GO:0008270	zinc ion binding