Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGGATCTAGGGTGTTAGTTAAGACAGTGATTTTAGATTCTGATTCCTCCAATGGTACTGATAATGTTGTTCTGTCAACACTCTTTCATCGAAAAATTGGGCTTCAAATTGATCCGCCATCTACTTCTCCTCACTCGACTCAGGTTCGGCACTCTCCCTCTCGATCGGCATCACCTCCTAAGGATGTTTCCTCTTAACCTACGGACCATGGTAAGTCTCCTGCTGCTTCAACGCTTCCAGCTTCTCCACAAACTTCTCTTCCAACTGATGAGGAGGATGCGAGTGATGACACTGACGAAGATTACGTTCTTATACTTGAGGACCCTCTTGCACTAGAGGAAACCACGACTTCTACGGAGGATCCTGTGTCCTTCCCTAAAATTCAAACATCCGAACCCCAGTCGACTGAAGGACCTGGTGATTCCTCCATTTCAATGTTGCTGCCCGGGCATGTTGGTTCCTCTTACGAACCCCATCGTCTACCTGTCAAGGGTCAACGCATAATCTTCACCAAGGCTGGTCATTGGAAGATATCTCTCAATGTACCCTCTATACCGATAAATTGTGTGTCGTTTCATTCTGAGGAAGGAGCACACAAATGGAAATATGTTTAA
mRNA sequence
ATGTCGGGATCTAGGGTGTTAGTTAAGACAGTGATTTTAGATTCTGATTCCTCCAATGGTACTGATAATGTTGTTCTGTCAACACTCTTTCATCGAAAAATTGGGCTTCAAATTGATCCGCCATCTACTTCTCCTCACTCGACTCAGTCTCCTGCTGCTTCAACGCTTCCAGCTTCTCCACAAACTTCTCTTCCAACTGATGAGGAGGATGCGAGTGATGACACTGACGAAGATTACGTTCTTATACTTGAGGACCCTCTTGCACTAGAGGAAACCACGACTTCTACGGAGGATCCTGTGTCCTTCCCTAAAATTCAAACATCCGAACCCCAGTCGACTGAAGGACCTGGTGATTCCTCCATTTCAATGTTGCTGCCCGGGCATGTTGGTTCCTCTTACGAACCCCATCGTCTACCTGTCAAGGGTCAACGCATAATCTTCACCAAGGCTGGTCATTGGAAGATATCTCTCAATGTACCCTCTATACCGATAAATTGTGTGTCGTTTCATTCTGAGGAAGGAGCACACAAATGGAAATATGTTTAA
Coding sequence (CDS)
ATGTCGGGATCTAGGGTGTTAGTTAAGACAGTGATTTTAGATTCTGATTCCTCCAATGGTACTGATAATGTTGTTCTGTCAACACTCTTTCATCGAAAAATTGGGCTTCAAATTGATCCGCCATCTACTTCTCCTCACTCGACTCAGTCTCCTGCTGCTTCAACGCTTCCAGCTTCTCCACAAACTTCTCTTCCAACTGATGAGGAGGATGCGAGTGATGACACTGACGAAGATTACGTTCTTATACTTGAGGACCCTCTTGCACTAGAGGAAACCACGACTTCTACGGAGGATCCTGTGTCCTTCCCTAAAATTCAAACATCCGAACCCCAGTCGACTGAAGGACCTGGTGATTCCTCCATTTCAATGTTGCTGCCCGGGCATGTTGGTTCCTCTTACGAACCCCATCGTCTACCTGTCAAGGGTCAACGCATAATCTTCACCAAGGCTGGTCATTGGAAGATATCTCTCAATGTACCCTCTATACCGATAAATTGTGTGTCGTTTCATTCTGAGGAAGGAGCACACAAATGGAAATATGTTTAA
Protein sequence
MSGSRVLVKTVILDSDSSNGTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASPQTSLPTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSSISMLLPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKYV
Homology
BLAST of MELO3C025574 vs. NCBI nr
Match:
KAA0035588.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK30950.1 putative mitochondrial protein [Cucumis melo var. makuwa])
HSP 1 Score: 357.5 bits (916), Expect = 7.0e-95
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0
Query: 1 MSGSRVLVKTVILDSDSSNGTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASP 60
MSGSRVLVKTVILDSDSSNGTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASP
Sbjct: 300 MSGSRVLVKTVILDSDSSNGTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASP 359
Query: 61 QTSLPTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSS 120
QTSLPTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSS
Sbjct: 360 QTSLPTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSS 419
Query: 121 ISMLLPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKY 180
ISMLLPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKY
Sbjct: 420 ISMLLPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKY 479
Query: 181 V 182
V
Sbjct: 480 V 480
BLAST of MELO3C025574 vs. NCBI nr
Match:
KAA0055022.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa])
HSP 1 Score: 171.4 bits (433), Expect = 7.1e-39
Identity = 98/177 (55.37%), Postives = 120/177 (67.80%), Query Frame = 0
Query: 5 RVLVKTVILDSDSSNGTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASPQTSL 64
RV ++TV+LDSDSS+ DNVVLSTL HRK S A S+ A PQ SL
Sbjct: 426 RVSIETVVLDSDSSDSKDNVVLSTLLHRK---------------SSAAPSSPHAFPQASL 485
Query: 65 PTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSSISML 124
PT+E+DASD+TDEDYV E+ LE+++TSTEDP + +T EP+STEG + SI M
Sbjct: 486 PTNEDDASDETDEDYVPGTEETTVLEDSSTSTEDPSASHDARTLEPRSTEGSSEFSIPMS 545
Query: 125 LPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKYV 182
PG+V SSY R PV+GQR+ TKAG KI NVPS+PI+ VSF SEEGAHKWKY+
Sbjct: 546 PPGNVDSSYSLRRPPVRGQRVFSTKAGRRKIPPNVPSVPIDGVSFRSEEGAHKWKYM 587
BLAST of MELO3C025574 vs. NCBI nr
Match:
XP_008441642.1 (PREDICTED: uncharacterized protein LOC103485722 [Cucumis melo])
HSP 1 Score: 171.4 bits (433), Expect = 7.1e-39
Identity = 98/177 (55.37%), Postives = 120/177 (67.80%), Query Frame = 0
Query: 5 RVLVKTVILDSDSSNGTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASPQTSL 64
RV ++TV+LDSDSS+ DNVVLSTL HRK S A S+ A PQ SL
Sbjct: 251 RVSIETVVLDSDSSDSKDNVVLSTLLHRK---------------SSAAPSSPHAFPQASL 310
Query: 65 PTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSSISML 124
PT+E+DASD+TDEDYV E+ LE+++TSTEDP + +T EP+STEG + SI M
Sbjct: 311 PTNEDDASDETDEDYVPGTEETTVLEDSSTSTEDPSASHDARTLEPRSTEGSSEFSIPMS 370
Query: 125 LPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKYV 182
PG+V SSY R PV+GQR+ TKAG KI NVPS+PI+ VSF SEEGAHKWKY+
Sbjct: 371 PPGNVDSSYSLRRPPVRGQRVFSTKAGRRKIPPNVPSVPIDGVSFRSEEGAHKWKYM 412
BLAST of MELO3C025574 vs. NCBI nr
Match:
XP_008464024.1 (PREDICTED: uncharacterized protein LOC103502008 [Cucumis melo])
HSP 1 Score: 171.0 bits (432), Expect = 9.3e-39
Identity = 98/177 (55.37%), Postives = 120/177 (67.80%), Query Frame = 0
Query: 5 RVLVKTVILDSDSSNGTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASPQTSL 64
RV V+TV+LD DSS+G DN D PS + +S A + PASPQ SL
Sbjct: 41 RVSVETVVLDFDSSDGIDN---------------DVPSRTTDHGKSSATPSFPASPQVSL 100
Query: 65 PTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSSISML 124
PTD+++ASDD DEDYV + ++ ALEET TSTED VS P +T EPQST+ PG+SSISM
Sbjct: 101 PTDDDEASDDIDEDYVPVTKETHALEETMTSTEDLVSSPDNRTPEPQSTKAPGESSISMS 160
Query: 125 LPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKYV 182
HVGSS PHR V+GQR++ TK G+ KI N+P + I+ VSFHSEEGAHKWKYV
Sbjct: 161 PLVHVGSSSRPHRQLVRGQRVVSTKTGNRKIPSNIPFMSIDGVSFHSEEGAHKWKYV 202
BLAST of MELO3C025574 vs. NCBI nr
Match:
KAA0058484.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK07262.1 flocculation protein FLO11-like [Cucumis melo var. makuwa])
HSP 1 Score: 162.5 bits (410), Expect = 3.3e-36
Identity = 99/179 (55.31%), Postives = 123/179 (68.72%), Query Frame = 0
Query: 5 RVLVKTVILDSDSSN--GTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASPQT 64
RV V+TV+LD DSS+ + + V S RK D PS + +S A + PASPQ
Sbjct: 49 RVSVETVVLDFDSSDVLHSPSWVASP---RK-----DVPSRTTDHGKSSATPSFPASPQV 108
Query: 65 SLPTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSSIS 124
SLPTD+++ASDD DEDYV + ++ ALEET TSTED VS P +T EPQST+ PG+SSIS
Sbjct: 109 SLPTDDDEASDDIDEDYVPVTKETHALEETMTSTEDLVSSPDNRTPEPQSTKAPGESSIS 168
Query: 125 MLLPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKYV 182
M HVGSS PHR V+GQR++ TK G+ KI N+P + I+ VSFHSEEGAHKWKYV
Sbjct: 169 MSPLVHVGSSSRPHRQLVRGQRVVSTKTGNRKIPSNIPFMSIDGVSFHSEEGAHKWKYV 219
BLAST of MELO3C025574 vs. ExPASy TrEMBL
Match:
A0A5D3E5Q4 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001760 PE=4 SV=1)
HSP 1 Score: 357.5 bits (916), Expect = 3.4e-95
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0
Query: 1 MSGSRVLVKTVILDSDSSNGTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASP 60
MSGSRVLVKTVILDSDSSNGTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASP
Sbjct: 300 MSGSRVLVKTVILDSDSSNGTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASP 359
Query: 61 QTSLPTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSS 120
QTSLPTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSS
Sbjct: 360 QTSLPTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSS 419
Query: 121 ISMLLPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKY 180
ISMLLPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKY
Sbjct: 420 ISMLLPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKY 479
Query: 181 V 182
V
Sbjct: 480 V 480
BLAST of MELO3C025574 vs. ExPASy TrEMBL
Match:
A0A5A7UGS9 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G001770 PE=4 SV=1)
HSP 1 Score: 171.4 bits (433), Expect = 3.5e-39
Identity = 98/177 (55.37%), Postives = 120/177 (67.80%), Query Frame = 0
Query: 5 RVLVKTVILDSDSSNGTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASPQTSL 64
RV ++TV+LDSDSS+ DNVVLSTL HRK S A S+ A PQ SL
Sbjct: 426 RVSIETVVLDSDSSDSKDNVVLSTLLHRK---------------SSAAPSSPHAFPQASL 485
Query: 65 PTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSSISML 124
PT+E+DASD+TDEDYV E+ LE+++TSTEDP + +T EP+STEG + SI M
Sbjct: 486 PTNEDDASDETDEDYVPGTEETTVLEDSSTSTEDPSASHDARTLEPRSTEGSSEFSIPMS 545
Query: 125 LPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKYV 182
PG+V SSY R PV+GQR+ TKAG KI NVPS+PI+ VSF SEEGAHKWKY+
Sbjct: 546 PPGNVDSSYSLRRPPVRGQRVFSTKAGRRKIPPNVPSVPIDGVSFRSEEGAHKWKYM 587
BLAST of MELO3C025574 vs. ExPASy TrEMBL
Match:
A0A1S3B3W2 (uncharacterized protein LOC103485722 OS=Cucumis melo OX=3656 GN=LOC103485722 PE=4 SV=1)
HSP 1 Score: 171.4 bits (433), Expect = 3.5e-39
Identity = 98/177 (55.37%), Postives = 120/177 (67.80%), Query Frame = 0
Query: 5 RVLVKTVILDSDSSNGTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASPQTSL 64
RV ++TV+LDSDSS+ DNVVLSTL HRK S A S+ A PQ SL
Sbjct: 251 RVSIETVVLDSDSSDSKDNVVLSTLLHRK---------------SSAAPSSPHAFPQASL 310
Query: 65 PTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSSISML 124
PT+E+DASD+TDEDYV E+ LE+++TSTEDP + +T EP+STEG + SI M
Sbjct: 311 PTNEDDASDETDEDYVPGTEETTVLEDSSTSTEDPSASHDARTLEPRSTEGSSEFSIPMS 370
Query: 125 LPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKYV 182
PG+V SSY R PV+GQR+ TKAG KI NVPS+PI+ VSF SEEGAHKWKY+
Sbjct: 371 PPGNVDSSYSLRRPPVRGQRVFSTKAGRRKIPPNVPSVPIDGVSFRSEEGAHKWKYM 412
BLAST of MELO3C025574 vs. ExPASy TrEMBL
Match:
A0A1S3CL10 (uncharacterized protein LOC103502008 OS=Cucumis melo OX=3656 GN=LOC103502008 PE=4 SV=1)
HSP 1 Score: 171.0 bits (432), Expect = 4.5e-39
Identity = 98/177 (55.37%), Postives = 120/177 (67.80%), Query Frame = 0
Query: 5 RVLVKTVILDSDSSNGTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASPQTSL 64
RV V+TV+LD DSS+G DN D PS + +S A + PASPQ SL
Sbjct: 41 RVSVETVVLDFDSSDGIDN---------------DVPSRTTDHGKSSATPSFPASPQVSL 100
Query: 65 PTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSSISML 124
PTD+++ASDD DEDYV + ++ ALEET TSTED VS P +T EPQST+ PG+SSISM
Sbjct: 101 PTDDDEASDDIDEDYVPVTKETHALEETMTSTEDLVSSPDNRTPEPQSTKAPGESSISMS 160
Query: 125 LPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKYV 182
HVGSS PHR V+GQR++ TK G+ KI N+P + I+ VSFHSEEGAHKWKYV
Sbjct: 161 PLVHVGSSSRPHRQLVRGQRVVSTKTGNRKIPSNIPFMSIDGVSFHSEEGAHKWKYV 202
BLAST of MELO3C025574 vs. ExPASy TrEMBL
Match:
A0A5D3C7L1 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G001600 PE=4 SV=1)
HSP 1 Score: 162.5 bits (410), Expect = 1.6e-36
Identity = 99/179 (55.31%), Postives = 123/179 (68.72%), Query Frame = 0
Query: 5 RVLVKTVILDSDSSN--GTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASPQT 64
RV V+TV+LD DSS+ + + V S RK D PS + +S A + PASPQ
Sbjct: 49 RVSVETVVLDFDSSDVLHSPSWVASP---RK-----DVPSRTTDHGKSSATPSFPASPQV 108
Query: 65 SLPTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSSIS 124
SLPTD+++ASDD DEDYV + ++ ALEET TSTED VS P +T EPQST+ PG+SSIS
Sbjct: 109 SLPTDDDEASDDIDEDYVPVTKETHALEETMTSTEDLVSSPDNRTPEPQSTKAPGESSIS 168
Query: 125 MLLPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKYV 182
M HVGSS PHR V+GQR++ TK G+ KI N+P + I+ VSFHSEEGAHKWKYV
Sbjct: 169 MSPLVHVGSSSRPHRQLVRGQRVVSTKTGNRKIPSNIPFMSIDGVSFHSEEGAHKWKYV 219
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAA0035588.1 | 7.0e-95 | 100.00 | putative mitochondrial protein [Cucumis melo var. makuwa] >TYK30950.1 putative m... | [more] |
KAA0055022.1 | 7.1e-39 | 55.37 | flocculation protein FLO11-like [Cucumis melo var. makuwa] | [more] |
XP_008441642.1 | 7.1e-39 | 55.37 | PREDICTED: uncharacterized protein LOC103485722 [Cucumis melo] | [more] |
XP_008464024.1 | 9.3e-39 | 55.37 | PREDICTED: uncharacterized protein LOC103502008 [Cucumis melo] | [more] |
KAA0058484.1 | 3.3e-36 | 55.31 | flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK07262.1 flocculat... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3E5Q4 | 3.4e-95 | 100.00 | Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... | [more] |
A0A5A7UGS9 | 3.5e-39 | 55.37 | Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... | [more] |
A0A1S3B3W2 | 3.5e-39 | 55.37 | uncharacterized protein LOC103485722 OS=Cucumis melo OX=3656 GN=LOC103485722 PE=... | [more] |
A0A1S3CL10 | 4.5e-39 | 55.37 | uncharacterized protein LOC103502008 OS=Cucumis melo OX=3656 GN=LOC103502008 PE=... | [more] |
A0A5D3C7L1 | 1.6e-36 | 55.31 | Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
Match Name | E-value | Identity | Description | |