MELO3C025574 (gene) Melon (DHL92) v4

Overview
NameMELO3C025574
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionFlocculation protein FLO11-like
Locationchr12: 12898269 .. 12898886 (+)
RNA-Seq ExpressionMELO3C025574
SyntenyMELO3C025574
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGGATCTAGGGTGTTAGTTAAGACAGTGATTTTAGATTCTGATTCCTCCAATGGTACTGATAATGTTGTTCTGTCAACACTCTTTCATCGAAAAATTGGGCTTCAAATTGATCCGCCATCTACTTCTCCTCACTCGACTCAGGTTCGGCACTCTCCCTCTCGATCGGCATCACCTCCTAAGGATGTTTCCTCTTAACCTACGGACCATGGTAAGTCTCCTGCTGCTTCAACGCTTCCAGCTTCTCCACAAACTTCTCTTCCAACTGATGAGGAGGATGCGAGTGATGACACTGACGAAGATTACGTTCTTATACTTGAGGACCCTCTTGCACTAGAGGAAACCACGACTTCTACGGAGGATCCTGTGTCCTTCCCTAAAATTCAAACATCCGAACCCCAGTCGACTGAAGGACCTGGTGATTCCTCCATTTCAATGTTGCTGCCCGGGCATGTTGGTTCCTCTTACGAACCCCATCGTCTACCTGTCAAGGGTCAACGCATAATCTTCACCAAGGCTGGTCATTGGAAGATATCTCTCAATGTACCCTCTATACCGATAAATTGTGTGTCGTTTCATTCTGAGGAAGGAGCACACAAATGGAAATATGTTTAA

mRNA sequence

ATGTCGGGATCTAGGGTGTTAGTTAAGACAGTGATTTTAGATTCTGATTCCTCCAATGGTACTGATAATGTTGTTCTGTCAACACTCTTTCATCGAAAAATTGGGCTTCAAATTGATCCGCCATCTACTTCTCCTCACTCGACTCAGTCTCCTGCTGCTTCAACGCTTCCAGCTTCTCCACAAACTTCTCTTCCAACTGATGAGGAGGATGCGAGTGATGACACTGACGAAGATTACGTTCTTATACTTGAGGACCCTCTTGCACTAGAGGAAACCACGACTTCTACGGAGGATCCTGTGTCCTTCCCTAAAATTCAAACATCCGAACCCCAGTCGACTGAAGGACCTGGTGATTCCTCCATTTCAATGTTGCTGCCCGGGCATGTTGGTTCCTCTTACGAACCCCATCGTCTACCTGTCAAGGGTCAACGCATAATCTTCACCAAGGCTGGTCATTGGAAGATATCTCTCAATGTACCCTCTATACCGATAAATTGTGTGTCGTTTCATTCTGAGGAAGGAGCACACAAATGGAAATATGTTTAA

Coding sequence (CDS)

ATGTCGGGATCTAGGGTGTTAGTTAAGACAGTGATTTTAGATTCTGATTCCTCCAATGGTACTGATAATGTTGTTCTGTCAACACTCTTTCATCGAAAAATTGGGCTTCAAATTGATCCGCCATCTACTTCTCCTCACTCGACTCAGTCTCCTGCTGCTTCAACGCTTCCAGCTTCTCCACAAACTTCTCTTCCAACTGATGAGGAGGATGCGAGTGATGACACTGACGAAGATTACGTTCTTATACTTGAGGACCCTCTTGCACTAGAGGAAACCACGACTTCTACGGAGGATCCTGTGTCCTTCCCTAAAATTCAAACATCCGAACCCCAGTCGACTGAAGGACCTGGTGATTCCTCCATTTCAATGTTGCTGCCCGGGCATGTTGGTTCCTCTTACGAACCCCATCGTCTACCTGTCAAGGGTCAACGCATAATCTTCACCAAGGCTGGTCATTGGAAGATATCTCTCAATGTACCCTCTATACCGATAAATTGTGTGTCGTTTCATTCTGAGGAAGGAGCACACAAATGGAAATATGTTTAA

Protein sequence

MSGSRVLVKTVILDSDSSNGTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASPQTSLPTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSSISMLLPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKYV
Homology
BLAST of MELO3C025574 vs. NCBI nr
Match: KAA0035588.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK30950.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 357.5 bits (916), Expect = 7.0e-95
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0

Query: 1   MSGSRVLVKTVILDSDSSNGTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASP 60
           MSGSRVLVKTVILDSDSSNGTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASP
Sbjct: 300 MSGSRVLVKTVILDSDSSNGTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASP 359

Query: 61  QTSLPTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSS 120
           QTSLPTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSS
Sbjct: 360 QTSLPTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSS 419

Query: 121 ISMLLPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKY 180
           ISMLLPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKY
Sbjct: 420 ISMLLPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKY 479

Query: 181 V 182
           V
Sbjct: 480 V 480

BLAST of MELO3C025574 vs. NCBI nr
Match: KAA0055022.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa])

HSP 1 Score: 171.4 bits (433), Expect = 7.1e-39
Identity = 98/177 (55.37%), Postives = 120/177 (67.80%), Query Frame = 0

Query: 5   RVLVKTVILDSDSSNGTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASPQTSL 64
           RV ++TV+LDSDSS+  DNVVLSTL HRK                S A S+  A PQ SL
Sbjct: 426 RVSIETVVLDSDSSDSKDNVVLSTLLHRK---------------SSAAPSSPHAFPQASL 485

Query: 65  PTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSSISML 124
           PT+E+DASD+TDEDYV   E+   LE+++TSTEDP +    +T EP+STEG  + SI M 
Sbjct: 486 PTNEDDASDETDEDYVPGTEETTVLEDSSTSTEDPSASHDARTLEPRSTEGSSEFSIPMS 545

Query: 125 LPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKYV 182
            PG+V SSY   R PV+GQR+  TKAG  KI  NVPS+PI+ VSF SEEGAHKWKY+
Sbjct: 546 PPGNVDSSYSLRRPPVRGQRVFSTKAGRRKIPPNVPSVPIDGVSFRSEEGAHKWKYM 587

BLAST of MELO3C025574 vs. NCBI nr
Match: XP_008441642.1 (PREDICTED: uncharacterized protein LOC103485722 [Cucumis melo])

HSP 1 Score: 171.4 bits (433), Expect = 7.1e-39
Identity = 98/177 (55.37%), Postives = 120/177 (67.80%), Query Frame = 0

Query: 5   RVLVKTVILDSDSSNGTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASPQTSL 64
           RV ++TV+LDSDSS+  DNVVLSTL HRK                S A S+  A PQ SL
Sbjct: 251 RVSIETVVLDSDSSDSKDNVVLSTLLHRK---------------SSAAPSSPHAFPQASL 310

Query: 65  PTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSSISML 124
           PT+E+DASD+TDEDYV   E+   LE+++TSTEDP +    +T EP+STEG  + SI M 
Sbjct: 311 PTNEDDASDETDEDYVPGTEETTVLEDSSTSTEDPSASHDARTLEPRSTEGSSEFSIPMS 370

Query: 125 LPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKYV 182
            PG+V SSY   R PV+GQR+  TKAG  KI  NVPS+PI+ VSF SEEGAHKWKY+
Sbjct: 371 PPGNVDSSYSLRRPPVRGQRVFSTKAGRRKIPPNVPSVPIDGVSFRSEEGAHKWKYM 412

BLAST of MELO3C025574 vs. NCBI nr
Match: XP_008464024.1 (PREDICTED: uncharacterized protein LOC103502008 [Cucumis melo])

HSP 1 Score: 171.0 bits (432), Expect = 9.3e-39
Identity = 98/177 (55.37%), Postives = 120/177 (67.80%), Query Frame = 0

Query: 5   RVLVKTVILDSDSSNGTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASPQTSL 64
           RV V+TV+LD DSS+G DN               D PS +    +S A  + PASPQ SL
Sbjct: 41  RVSVETVVLDFDSSDGIDN---------------DVPSRTTDHGKSSATPSFPASPQVSL 100

Query: 65  PTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSSISML 124
           PTD+++ASDD DEDYV + ++  ALEET TSTED VS P  +T EPQST+ PG+SSISM 
Sbjct: 101 PTDDDEASDDIDEDYVPVTKETHALEETMTSTEDLVSSPDNRTPEPQSTKAPGESSISMS 160

Query: 125 LPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKYV 182
              HVGSS  PHR  V+GQR++ TK G+ KI  N+P + I+ VSFHSEEGAHKWKYV
Sbjct: 161 PLVHVGSSSRPHRQLVRGQRVVSTKTGNRKIPSNIPFMSIDGVSFHSEEGAHKWKYV 202

BLAST of MELO3C025574 vs. NCBI nr
Match: KAA0058484.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK07262.1 flocculation protein FLO11-like [Cucumis melo var. makuwa])

HSP 1 Score: 162.5 bits (410), Expect = 3.3e-36
Identity = 99/179 (55.31%), Postives = 123/179 (68.72%), Query Frame = 0

Query: 5   RVLVKTVILDSDSSN--GTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASPQT 64
           RV V+TV+LD DSS+   + + V S    RK     D PS +    +S A  + PASPQ 
Sbjct: 49  RVSVETVVLDFDSSDVLHSPSWVASP---RK-----DVPSRTTDHGKSSATPSFPASPQV 108

Query: 65  SLPTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSSIS 124
           SLPTD+++ASDD DEDYV + ++  ALEET TSTED VS P  +T EPQST+ PG+SSIS
Sbjct: 109 SLPTDDDEASDDIDEDYVPVTKETHALEETMTSTEDLVSSPDNRTPEPQSTKAPGESSIS 168

Query: 125 MLLPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKYV 182
           M    HVGSS  PHR  V+GQR++ TK G+ KI  N+P + I+ VSFHSEEGAHKWKYV
Sbjct: 169 MSPLVHVGSSSRPHRQLVRGQRVVSTKTGNRKIPSNIPFMSIDGVSFHSEEGAHKWKYV 219

BLAST of MELO3C025574 vs. ExPASy TrEMBL
Match: A0A5D3E5Q4 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001760 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.4e-95
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0

Query: 1   MSGSRVLVKTVILDSDSSNGTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASP 60
           MSGSRVLVKTVILDSDSSNGTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASP
Sbjct: 300 MSGSRVLVKTVILDSDSSNGTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASP 359

Query: 61  QTSLPTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSS 120
           QTSLPTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSS
Sbjct: 360 QTSLPTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSS 419

Query: 121 ISMLLPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKY 180
           ISMLLPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKY
Sbjct: 420 ISMLLPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKY 479

Query: 181 V 182
           V
Sbjct: 480 V 480

BLAST of MELO3C025574 vs. ExPASy TrEMBL
Match: A0A5A7UGS9 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G001770 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.5e-39
Identity = 98/177 (55.37%), Postives = 120/177 (67.80%), Query Frame = 0

Query: 5   RVLVKTVILDSDSSNGTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASPQTSL 64
           RV ++TV+LDSDSS+  DNVVLSTL HRK                S A S+  A PQ SL
Sbjct: 426 RVSIETVVLDSDSSDSKDNVVLSTLLHRK---------------SSAAPSSPHAFPQASL 485

Query: 65  PTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSSISML 124
           PT+E+DASD+TDEDYV   E+   LE+++TSTEDP +    +T EP+STEG  + SI M 
Sbjct: 486 PTNEDDASDETDEDYVPGTEETTVLEDSSTSTEDPSASHDARTLEPRSTEGSSEFSIPMS 545

Query: 125 LPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKYV 182
            PG+V SSY   R PV+GQR+  TKAG  KI  NVPS+PI+ VSF SEEGAHKWKY+
Sbjct: 546 PPGNVDSSYSLRRPPVRGQRVFSTKAGRRKIPPNVPSVPIDGVSFRSEEGAHKWKYM 587

BLAST of MELO3C025574 vs. ExPASy TrEMBL
Match: A0A1S3B3W2 (uncharacterized protein LOC103485722 OS=Cucumis melo OX=3656 GN=LOC103485722 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.5e-39
Identity = 98/177 (55.37%), Postives = 120/177 (67.80%), Query Frame = 0

Query: 5   RVLVKTVILDSDSSNGTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASPQTSL 64
           RV ++TV+LDSDSS+  DNVVLSTL HRK                S A S+  A PQ SL
Sbjct: 251 RVSIETVVLDSDSSDSKDNVVLSTLLHRK---------------SSAAPSSPHAFPQASL 310

Query: 65  PTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSSISML 124
           PT+E+DASD+TDEDYV   E+   LE+++TSTEDP +    +T EP+STEG  + SI M 
Sbjct: 311 PTNEDDASDETDEDYVPGTEETTVLEDSSTSTEDPSASHDARTLEPRSTEGSSEFSIPMS 370

Query: 125 LPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKYV 182
            PG+V SSY   R PV+GQR+  TKAG  KI  NVPS+PI+ VSF SEEGAHKWKY+
Sbjct: 371 PPGNVDSSYSLRRPPVRGQRVFSTKAGRRKIPPNVPSVPIDGVSFRSEEGAHKWKYM 412

BLAST of MELO3C025574 vs. ExPASy TrEMBL
Match: A0A1S3CL10 (uncharacterized protein LOC103502008 OS=Cucumis melo OX=3656 GN=LOC103502008 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 4.5e-39
Identity = 98/177 (55.37%), Postives = 120/177 (67.80%), Query Frame = 0

Query: 5   RVLVKTVILDSDSSNGTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASPQTSL 64
           RV V+TV+LD DSS+G DN               D PS +    +S A  + PASPQ SL
Sbjct: 41  RVSVETVVLDFDSSDGIDN---------------DVPSRTTDHGKSSATPSFPASPQVSL 100

Query: 65  PTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSSISML 124
           PTD+++ASDD DEDYV + ++  ALEET TSTED VS P  +T EPQST+ PG+SSISM 
Sbjct: 101 PTDDDEASDDIDEDYVPVTKETHALEETMTSTEDLVSSPDNRTPEPQSTKAPGESSISMS 160

Query: 125 LPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKYV 182
              HVGSS  PHR  V+GQR++ TK G+ KI  N+P + I+ VSFHSEEGAHKWKYV
Sbjct: 161 PLVHVGSSSRPHRQLVRGQRVVSTKTGNRKIPSNIPFMSIDGVSFHSEEGAHKWKYV 202

BLAST of MELO3C025574 vs. ExPASy TrEMBL
Match: A0A5D3C7L1 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G001600 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.6e-36
Identity = 99/179 (55.31%), Postives = 123/179 (68.72%), Query Frame = 0

Query: 5   RVLVKTVILDSDSSN--GTDNVVLSTLFHRKIGLQIDPPSTSPHSTQSPAASTLPASPQT 64
           RV V+TV+LD DSS+   + + V S    RK     D PS +    +S A  + PASPQ 
Sbjct: 49  RVSVETVVLDFDSSDVLHSPSWVASP---RK-----DVPSRTTDHGKSSATPSFPASPQV 108

Query: 65  SLPTDEEDASDDTDEDYVLILEDPLALEETTTSTEDPVSFPKIQTSEPQSTEGPGDSSIS 124
           SLPTD+++ASDD DEDYV + ++  ALEET TSTED VS P  +T EPQST+ PG+SSIS
Sbjct: 109 SLPTDDDEASDDIDEDYVPVTKETHALEETMTSTEDLVSSPDNRTPEPQSTKAPGESSIS 168

Query: 125 MLLPGHVGSSYEPHRLPVKGQRIIFTKAGHWKISLNVPSIPINCVSFHSEEGAHKWKYV 182
           M    HVGSS  PHR  V+GQR++ TK G+ KI  N+P + I+ VSFHSEEGAHKWKYV
Sbjct: 169 MSPLVHVGSSSRPHRQLVRGQRVVSTKTGNRKIPSNIPFMSIDGVSFHSEEGAHKWKYV 219

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAA0035588.17.0e-95100.00putative mitochondrial protein [Cucumis melo var. makuwa] >TYK30950.1 putative m... [more]
KAA0055022.17.1e-3955.37flocculation protein FLO11-like [Cucumis melo var. makuwa][more]
XP_008441642.17.1e-3955.37PREDICTED: uncharacterized protein LOC103485722 [Cucumis melo][more]
XP_008464024.19.3e-3955.37PREDICTED: uncharacterized protein LOC103502008 [Cucumis melo][more]
KAA0058484.13.3e-3655.31flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK07262.1 flocculat... [more]
Match NameE-valueIdentityDescription
A0A5D3E5Q43.4e-95100.00Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A5A7UGS93.5e-3955.37Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A1S3B3W23.5e-3955.37uncharacterized protein LOC103485722 OS=Cucumis melo OX=3656 GN=LOC103485722 PE=... [more]
A0A1S3CL104.5e-3955.37uncharacterized protein LOC103502008 OS=Cucumis melo OX=3656 GN=LOC103502008 PE=... [more]
A0A5D3C7L11.6e-3655.31Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..121
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..84

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025574.1MELO3C025574.1mRNA