MELO3C025539 (gene) Melon (DHL92) v4

Overview
NameMELO3C025539
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr12: 13560951 .. 13561226 (+)
RNA-Seq ExpressionMELO3C025539
SyntenyMELO3C025539
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACTTAATACCCAAAGAACTGGAACAAACATTAGGAACGTTGACTACAGCATTATTCACAACAAAATGGCCTCTTCCATTGTTATGGATTCTGATCATCCTATTATGGTAACCCGAAGGAACAATGGAACCTGTCGGAAATCGAATCAAATCACTGAATTGAAGCGGCATGACAATCAAATGGCTGAGCACGAATGCCTCGAGATGGTTGACAGCGATGGAGATATTGGAGAGCTGAGAGTCTTGTGGGATGAAGAAGGTGATTTCTTTTAG

mRNA sequence

ATGGCACTTAATACCCAAAGAACTGGAACAAACATTAGGAACGTTGACTACAGCATTATTCACAACAAAATGGCCTCTTCCATTGTTATGGATTCTGATCATCCTATTATGGTAACCCGAAGGAACAATGGAACCTGTCGGAAATCGAATCAAATCACTGAATTGAAGCGGCATGACAATCAAATGGCTGAGCACGAATGCCTCGAGATGGTTGACAGCGATGGAGATATTGGAGAGCTGAGAGTCTTGTGGGATGAAGAAGGTGATTTCTTTTAG

Coding sequence (CDS)

ATGGCACTTAATACCCAAAGAACTGGAACAAACATTAGGAACGTTGACTACAGCATTATTCACAACAAAATGGCCTCTTCCATTGTTATGGATTCTGATCATCCTATTATGGTAACCCGAAGGAACAATGGAACCTGTCGGAAATCGAATCAAATCACTGAATTGAAGCGGCATGACAATCAAATGGCTGAGCACGAATGCCTCGAGATGGTTGACAGCGATGGAGATATTGGAGAGCTGAGAGTCTTGTGGGATGAAGAAGGTGATTTCTTTTAG

Protein sequence

MALNTQRTGTNIRNVDYSIIHNKMASSIVMDSDHPIMVTRRNNGTCRKSNQITELKRHDNQMAEHECLEMVDSDGDIGELRVLWDEEGDFF
Homology
[Close]
BLAST of MELO3C025539 vs. NCBI nr
Match: KAE8637357.1 (hypothetical protein CSA_011907 [Cucumis sativus])

HSP 1 Score: 106.3 bits (264), Expect = 1.4e-19
Identity = 52/66 (78.79%), Postives = 60/66 (90.91%), Query Frame = 0 

Query: 24 MASSIVMDSDHPIMVTRRNNGTCRKSNQITELKRHDNQMAEHECLEMVDSDGDIGELRVL 83
          MASSIVMDSDHPIMVTRRNNGT RKSNQ+TELKRH++ MAEH+ LE V+SDGD+G+L VL
Sbjct: 1  MASSIVMDSDHPIMVTRRNNGTRRKSNQVTELKRHEDHMAEHKRLETVNSDGDVGDLGVL 60

Query: 84 WDEEGD 90
           DE+GD
Sbjct: 61 GDEKGD 66

[Close]
BLAST of MELO3C025539 vs. ExPASy TrEMBL
Match: A0A0A0LVS5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181460 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.8e-21
Identity = 54/68 (79.41%), Postives = 62/68 (91.18%), Query Frame = 0 

Query: 24 MASSIVMDSDHPIMVTRRNNGTCRKSNQITELKRHDNQMAEHECLEMVDSDGDIGELRVL 83
          MASSIVMDSDHPIMVTRRNNGT RKSNQ+TELKRH++ MAEH+ LE V+SDGD+G+L VL
Sbjct: 1  MASSIVMDSDHPIMVTRRNNGTRRKSNQVTELKRHEDHMAEHKRLETVNSDGDVGDLGVL 60

Query: 84 WDEEGDFF 92
           DE+GDFF
Sbjct: 61 GDEKGDFF 68

The following BLAST results are available for this feature:
BLAST of MELO3C025539 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C025539 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8637357.11.4e-1978.79hypothetical protein CSA_011907 [Cucumis sativus][more]
BLAST of MELO3C025539 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVS52.8e-2179.41Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181460 PE=4 SV=1[more]
BLAST of MELO3C025539 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025539.1MELO3C025539.1mRNA