MELO3C025478.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTGACAAAAGGAACAAATACATTTACTCCAGCTCTGATTCTAATTCTGATAACAAGAGAAGATCATACGCGGAAGTTGTTATCAAAGGAAGCTCTTCTGATGATGATATTATCAACTTGTCCATAAATGCAAATACGGGGAAAAAAAAAGGTAGGGAAAGGATTTGCTGAAATTGTCCTTGATTGGAACAAGATCGTCGTCTTAACGAGAAGATACTTTCATGATGATTGGGAGAAAATTGTTGAGAAGCTAAAAGATCAACTTGACCATCCTATAAGCTATAAACCTTTTCATGCTGATAAAGCACTGATTTTCTTCAAAGATAAAGAGCAAGCAAATCTGATCTGCAAAAACAAGGGATAGACTACGGTGGGGTGGTTCTATGTGAAATTTGAAGAATGGAACCAAAAAGCACATGCATCGCCGAAAGTTGTGCCAAGCTATGGAGGTTGGATAAAAGTTCGTGGAATCCCATTGCACGCTTGGAACTTAGAAAGTTTCATTCAAATTGGTGATGCCTGTGGAGGATACATTGATGTGGTTCGTGAAACCAGAGAGCTCACAAACCTCATTGAAGCTTTTATCAGAATAAAAGACAACTAG ATGGTTGACAAAAGGAACAAATACATTTACTCCAGCTCTGATTCTAATTCTGATAACAAGAGAAGATCATACGCGGAAGTTGTTATCAAAGGAAGCTCTTCTGATGATGATATTATCAACTTGTCCATAAATGCAAATACGGGGAAAAAAAAAGGTAGGGAAAGGATTTGCTGAAATTGTCCTTGATTGGAACAAGATCGTCGTCTTAACGAGAAGATACTTTCATGATGATTGGGAGAAAATTGTTGAGAAGCTAAAAGATCAACTTGACCATCCTATAAGCTATAAACCTTTTCATGCTGATAAAGCACTGATTTTCTTCAAAGATAAAGAGCAAGCAAATCTGATCTGCAAAAACAAGGGATAGACTACGGTGGGGTGGTTCTATGTGAAATTTGAAGAATGGAACCAAAAAGCACATGCATCGCCGAAAGTTGTGCCAAGCTATGGAGGTTGGATAAAAGTTCGTGGAATCCCATTGCACGCTTGGAACTTAGAAAGTTTCATTCAAATTGGTGATGCCTGTGGAGGATACATTGATGTGGTTCGTGAAACCAGAGAGCTCACAAACCTCATTGAAGCTTTTATCAGAATAAAAGACAACTAG ATGCAAATACGGGGAAAAAAAAAGGTAGGGAAAGGATTTGCTGAAATTGTCCTTGATTGGAACAAGATCGTCGTCTTAACGAGAAGATACTTTCATGATGATTGGGAGAAAATTGTTGAGAAGCTAAAAGATCAACTTGACCATCCTATAAGCTATAAACCTTTTCATGCTGATAAAGCACTGATTTTCTTCAAAGATAAAGAGCAAGCAAATCTGATCTGCAAAAACAAGGGATAG MQIRGKKKVGKGFAEIVLDWNKIVVLTRRYFHDDWEKIVEKLKDQLDHPISYKPFHADKALIFFKDKEQANLICKNKG Homology
BLAST of MELO3C025478.jh1 vs. NCBI nr
Match: TYK05762.1 (cleavage and polyadenylation specificity factor subunit 1 [Cucumis melo var. makuwa]) HSP 1 Score: 152 bits (385), Expect = 4.56e-45 Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of MELO3C025478.jh1 vs. NCBI nr
Match: KAA0051807.1 (hypothetical protein E6C27_scaffold60G002200 [Cucumis melo var. makuwa] >TYK21434.1 hypothetical protein E5676_scaffold609G00990 [Cucumis melo var. makuwa]) HSP 1 Score: 122 bits (307), Expect = 5.57e-31 Identity = 55/72 (76.39%), Postives = 59/72 (81.94%), Query Frame = 0
BLAST of MELO3C025478.jh1 vs. NCBI nr
Match: TYK18307.1 (hypothetical protein E5676_scaffold456G00160 [Cucumis melo var. makuwa]) HSP 1 Score: 112 bits (281), Expect = 5.31e-29 Identity = 51/75 (68.00%), Postives = 60/75 (80.00%), Query Frame = 0
BLAST of MELO3C025478.jh1 vs. NCBI nr
Match: KAA0047970.1 (hypothetical protein E6C27_scaffold385G00300 [Cucumis melo var. makuwa]) HSP 1 Score: 111 bits (278), Expect = 1.50e-28 Identity = 51/75 (68.00%), Postives = 60/75 (80.00%), Query Frame = 0
BLAST of MELO3C025478.jh1 vs. NCBI nr
Match: KAA0050054.1 (hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa]) HSP 1 Score: 112 bits (280), Expect = 7.87e-27 Identity = 50/72 (69.44%), Postives = 57/72 (79.17%), Query Frame = 0
BLAST of MELO3C025478.jh1 vs. ExPASy TrEMBL
Match: A0A5D3C3G6 (Cleavage and polyadenylation specificity factor subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002510 PE=4 SV=1) HSP 1 Score: 152 bits (385), Expect = 2.21e-45 Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of MELO3C025478.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DCX6 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold609G00990 PE=4 SV=1) HSP 1 Score: 122 bits (307), Expect = 2.70e-31 Identity = 55/72 (76.39%), Postives = 59/72 (81.94%), Query Frame = 0
BLAST of MELO3C025478.jh1 vs. ExPASy TrEMBL
Match: A0A5D3D436 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00160 PE=4 SV=1) HSP 1 Score: 112 bits (281), Expect = 2.57e-29 Identity = 51/75 (68.00%), Postives = 60/75 (80.00%), Query Frame = 0
BLAST of MELO3C025478.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TXP6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00300 PE=4 SV=1) HSP 1 Score: 111 bits (278), Expect = 7.28e-29 Identity = 51/75 (68.00%), Postives = 60/75 (80.00%), Query Frame = 0
BLAST of MELO3C025478.jh1 vs. ExPASy TrEMBL
Match: A0A5A7U495 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00340 PE=4 SV=1) HSP 1 Score: 112 bits (280), Expect = 3.81e-27 Identity = 50/72 (69.44%), Postives = 57/72 (79.17%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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