MELO3C025287 (gene) Melon (DHL92) v4

Overview


Name	MELO3C025287
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr02: 18525101 .. 18525531 (+)
RNA-Seq Expression	MELO3C025287
Synteny	MELO3C025287

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAGCCTTCTCCTTTTACTTACCTTTCCCTTTTCGTCTCTTTTTGTGCTATCTCATTTTTTAATTGAGGCCTAAAAAATAAACAATGGCTAGCATTTCTTCAGAGCTCTTTCAATCCAATCTCAAGAACAGTCATGGAGATTGCGGCCGCAGTGGTAAGAACTATCTCGACCCGCCTCCTCCTCCTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCAACCCCATATTGATATCGGCGGAGGCGGAAGTATAGTTGCAGATTACGACTTTGCTCCGGCAGCATGAATAAAGTGATCAAATACATGATTACAAGATAACATAATTTCTTTTGCTGATAAATTTGAAGTAAGAGCGGTAATAAATATTTTTTTATCTTCTGAGTTATGTTTAGATTGACTGTCAATATACTGTATTAGATATATTATAAC

mRNA sequence

TCAGCCTTCTCCTTTTACTTACCTTTCCCTTTTCGTCTCTTTTTGTGCTATCTCATTTTTTAATTGAGGCCTAAAAAATAAACAATGGCTAGCATTTCTTCAGAGCTCTTTCAATCCAATCTCAAGAACAGTCATGGAGATTGCGGCCGCAGTGGTAAGAACTATCTCGACCCGCCTCCTCCTCCTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCAACCCCATATTGATATCGGCGGAGGCGGAAGTATAGTTGCAGATTACGACTTTGCTCCGGCAGCATGAATAAAGTGATCAAATACATGATTACAAGATAACATAATTTCTTTTGCTGATAAATTTGAAGTAAGAGCGGTAATAAATATTTTTTTATCTTCTGAGTTATGTTTAGATTGACTGTCAATATACTGTATTAGATATATTATAAC

Coding sequence (CDS)

ATGGCTAGCATTTCTTCAGAGCTCTTTCAATCCAATCTCAAGAACAGTCATGGAGATTGCGGCCGCAGTGGTAAGAACTATCTCGACCCGCCTCCTCCTCCTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCAACCCCATATTGATATCGGCGGAGGCGGAAGTATAGTTGCAGATTACGACTTTGCTCCGGCAGCATGA

Protein sequence

MASISSELFQSNLKNSHGDCGRSGKNYLDPPPPPPLPLPLPLPLPQPHIDIGGGGSIVADYDFAPAA

Homology

[Close]

BLAST of MELO3C025287 vs. NCBI nr
Match: KGN65403.1 (hypothetical protein Csa_019940 [Cucumis sativus])

HSP 1 Score: 115.5 bits (288), Expect = 1.7e-22
Identity = 59/67 (88.06%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 1  MASISSELFQSNLKNSHGDCGRSGKNYLDPPPPPPLPLPLPLPLPQPHIDIGGGGSIVAD 60
          MASISSELFQSNLKNSHGD    GKNYLDPPPPP    PLPLPLPQPHIDIGGGGSIVAD
Sbjct: 1  MASISSELFQSNLKNSHGDRCHGGKNYLDPPPPP----PLPLPLPQPHIDIGGGGSIVAD 60

Query: 61 YDFAPAA 68
          YDFAPAA
Sbjct: 61 YDFAPAA 63

[Close]

BLAST of MELO3C025287 vs. ExPASy TrEMBL
Match: A0A0A0LUD7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G409740 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 8.3e-23
Identity = 59/67 (88.06%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 1  MASISSELFQSNLKNSHGDCGRSGKNYLDPPPPPPLPLPLPLPLPQPHIDIGGGGSIVAD 60
          MASISSELFQSNLKNSHGD    GKNYLDPPPPP    PLPLPLPQPHIDIGGGGSIVAD
Sbjct: 1  MASISSELFQSNLKNSHGDRCHGGKNYLDPPPPP----PLPLPLPQPHIDIGGGGSIVAD 60

Query: 61 YDFAPAA 68
          YDFAPAA
Sbjct: 61 YDFAPAA 63

The following BLAST results are available for this feature:

BLAST of MELO3C025287 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN65403.1	1.7e-22	88.06	hypothetical protein Csa_019940 [Cucumis sativus]	[more]

BLAST of MELO3C025287 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C025287 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUD7	8.3e-23	88.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G409740 PE=4 SV=1	[more]

BLAST of MELO3C025287 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025287.1	MELO3C025287.1	mRNA