MELO3C025216 (gene) Melon (DHL92) v4

Overview


Name	MELO3C025216
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr08: 26745560 .. 26746410 (+)
RNA-Seq Expression	MELO3C025216
Synteny	MELO3C025216

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGCTTGGACGAAATGTGGCGACTTGAAACGCAACGAACGACTTGAACGCACAGACGACTACTGGTGGGTGGTCGTCGGAGTAGAGAGGCTGACGACGACGTTCGATGGAGAAGAGAGGAGATTGGGGTTGGGGCAGCGACTAGAGAAGAAGAAGAAGATGATGATAGAGAGGGTTGCACGTAAGAGTTTTAAAATATAATAACAACAACAACAACAACAACAACAACAACAACAACAACAACAATAATAATAATATAAAGTAATATAATATATTAAATAATAAAATGTTAGAAATAGTGAGTTTGAGCCTTGATGAATGCTCTGGGTAGTTAAGATTTACTTTACCCTAATTTTTTATTAGTTTAATTAGGCTTGTGTTGCTTATAAATTTCCCCGCTTTGTACCTTTATGATTATCAGTAAATAATAAGAACAAAATATTGTGGTTATTCTCTCAATACTCGAGTTTTCACTTAAATATGTGTGTTTTCTTTGTCTATATTTTCAATATGATTTAGGCGACACAACTAGTGATGGAACAAACCTAGGCGACACAACTAGTGATGGAAATCAAATAGATGAGACAGTCGACGTCACCATTGATGCTCGGATTAGCATTGCCATGGAAAAATGGTTCCATTACCTTCAAACAATGCCGAAAAAATGTAAGGCTGTCGATTTCGCTATTGTCCGCACAACCAAAACCCCCTCATGTACCACAACCACCAGAGCTAAATACACCGGTTTGTCCTCCTTAACCAGTGACGACCATCTCATATGTACAACCCTCTTCTTCATGCGTAGCCTATATTGCTCGCCACGCCTCGATTCATGTACTGCCATCTAA

mRNA sequence

ATGGATGCTTGGACGAAATGTGGCGACTTGAAACGCAACGAACGACTTGAACGCACAGACGACTACTGGTGGGTGGTCGTCGGAGTAGAGAGGCTGACGACGACGTTCGATGGAGAAGAGAGGAGATTGGGGTTGGGGCAGCGACTAGAGAAGAAGAAGAAGATGATGATAGAGAGGGTTGCACGCGACACAACTAGTGATGGAACAAACCTAGGCGACACAACTAGTGATGGAAATCAAATAGATGAGACAGTCGACGTCACCATTGATGCTCGGATTAGCATTGCCATGGAAAAATGGTTCCATTACCTTCAAACAATGCCGAAAAAATGTAAGGCTGTCGATTTCGCTATTGTCCGCACAACCAAAACCCCCTCATGTACCACAACCACCAGAGCTAAATACACCGGTTTGTCCTCCTTAACCAGTGACGACCATCTCATATGTACAACCCTCTTCTTCATGCGTAGCCTATATTGCTCGCCACGCCTCGATTCATGTACTGCCATCTAA

Coding sequence (CDS)

ATGGATGCTTGGACGAAATGTGGCGACTTGAAACGCAACGAACGACTTGAACGCACAGACGACTACTGGTGGGTGGTCGTCGGAGTAGAGAGGCTGACGACGACGTTCGATGGAGAAGAGAGGAGATTGGGGTTGGGGCAGCGACTAGAGAAGAAGAAGAAGATGATGATAGAGAGGGTTGCACGCGACACAACTAGTGATGGAACAAACCTAGGCGACACAACTAGTGATGGAAATCAAATAGATGAGACAGTCGACGTCACCATTGATGCTCGGATTAGCATTGCCATGGAAAAATGGTTCCATTACCTTCAAACAATGCCGAAAAAATGTAAGGCTGTCGATTTCGCTATTGTCCGCACAACCAAAACCCCCTCATGTACCACAACCACCAGAGCTAAATACACCGGTTTGTCCTCCTTAACCAGTGACGACCATCTCATATGTACAACCCTCTTCTTCATGCGTAGCCTATATTGCTCGCCACGCCTCGATTCATGTACTGCCATCTAA

Protein sequence

MDAWTKCGDLKRNERLERTDDYWWVVVGVERLTTTFDGEERRLGLGQRLEKKKKMMIERVARDTTSDGTNLGDTTSDGNQIDETVDVTIDARISIAMEKWFHYLQTMPKKCKAVDFAIVRTTKTPSCTTTTRAKYTGLSSLTSDDHLICTTLFFMRSLYCSPRLDSCTAI

Homology

[Close]

BLAST of MELO3C025216 vs. NCBI nr
Match: TYK09778.1 (hypothetical protein E5676_scaffold127G00670 [Cucumis melo var. makuwa])

HSP 1 Score: 345.1 bits (884), Expect = 3.4e-91
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MDAWTKCGDLKRNERLERTDDYWWVVVGVERLTTTFDGEERRLGLGQRLEKKKKMMIERV 60
           MDAWTKCGDLKRNERLERTDDYWWVVVGVERLTTTFDGEERRLGLGQRLEKKKKMMIERV
Sbjct: 1   MDAWTKCGDLKRNERLERTDDYWWVVVGVERLTTTFDGEERRLGLGQRLEKKKKMMIERV 60

Query: 61  ARDTTSDGTNLGDTTSDGNQIDETVDVTIDARISIAMEKWFHYLQTMPKKCKAVDFAIVR 120
           ARDTTSDGTNLGDTTSDGNQIDETVDVTIDARISIAMEKWFHYLQTMPKKCKAVDFAIVR
Sbjct: 61  ARDTTSDGTNLGDTTSDGNQIDETVDVTIDARISIAMEKWFHYLQTMPKKCKAVDFAIVR 120

Query: 121 TTKTPSCTTTTRAKYTGLSSLTSDDHLICTTLFFMRSLYCSPRLDSCTAI 171
           TTKTPSCTTTTRAKYTGLSSLTSDDHLICTTLFFMRSLYCSPRLDSCTAI
Sbjct: 121 TTKTPSCTTTTRAKYTGLSSLTSDDHLICTTLFFMRSLYCSPRLDSCTAI 170

[Close]

BLAST of MELO3C025216 vs. NCBI nr
Match: KAA0025395.1 (uncharacterized protein E6C27_scaffold1220G00260 [Cucumis melo var. makuwa])

HSP 1 Score: 214.2 bits (544), Expect = 9.0e-52
Identity = 104/109 (95.41%), Postives = 104/109 (95.41%), Query Frame = 0


Query: 1   MDAWTKCGDLKRNERLERTDDYWWVVVGVERLTTTFDGEERRLGLGQRLEKKKKMMIERV 60
           MDAWTKCGDLKRNERLER D YWWVVVGVE LTTTFDGEERRLGLGQRLEKKK MMIER 
Sbjct: 1   MDAWTKCGDLKRNERLERIDGYWWVVVGVEGLTTTFDGEERRLGLGQRLEKKKMMMIERA 60

Query: 61  ARDTTSDGTNLGDTTSDGNQIDETVDVTIDARISIAMEKWFHYLQTMPK 110
           ARDTTSDGTNLGDTTSDGNQIDETVDVTIDARISIAMEKWFHYLQTMPK
Sbjct: 61  ARDTTSDGTNLGDTTSDGNQIDETVDVTIDARISIAMEKWFHYLQTMPK 109

[Close]

BLAST of MELO3C025216 vs. ExPASy TrEMBL
Match: A0A5D3CEX3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G00670 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 1.6e-91
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MDAWTKCGDLKRNERLERTDDYWWVVVGVERLTTTFDGEERRLGLGQRLEKKKKMMIERV 60
           MDAWTKCGDLKRNERLERTDDYWWVVVGVERLTTTFDGEERRLGLGQRLEKKKKMMIERV
Sbjct: 1   MDAWTKCGDLKRNERLERTDDYWWVVVGVERLTTTFDGEERRLGLGQRLEKKKKMMIERV 60

Query: 61  ARDTTSDGTNLGDTTSDGNQIDETVDVTIDARISIAMEKWFHYLQTMPKKCKAVDFAIVR 120
           ARDTTSDGTNLGDTTSDGNQIDETVDVTIDARISIAMEKWFHYLQTMPKKCKAVDFAIVR
Sbjct: 61  ARDTTSDGTNLGDTTSDGNQIDETVDVTIDARISIAMEKWFHYLQTMPKKCKAVDFAIVR 120

Query: 121 TTKTPSCTTTTRAKYTGLSSLTSDDHLICTTLFFMRSLYCSPRLDSCTAI 171
           TTKTPSCTTTTRAKYTGLSSLTSDDHLICTTLFFMRSLYCSPRLDSCTAI
Sbjct: 121 TTKTPSCTTTTRAKYTGLSSLTSDDHLICTTLFFMRSLYCSPRLDSCTAI 170

[Close]

BLAST of MELO3C025216 vs. ExPASy TrEMBL
Match: A0A5A7SLQ3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1220G00260 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.4e-52
Identity = 104/109 (95.41%), Postives = 104/109 (95.41%), Query Frame = 0


Query: 1   MDAWTKCGDLKRNERLERTDDYWWVVVGVERLTTTFDGEERRLGLGQRLEKKKKMMIERV 60
           MDAWTKCGDLKRNERLER D YWWVVVGVE LTTTFDGEERRLGLGQRLEKKK MMIER 
Sbjct: 1   MDAWTKCGDLKRNERLERIDGYWWVVVGVEGLTTTFDGEERRLGLGQRLEKKKMMMIERA 60

Query: 61  ARDTTSDGTNLGDTTSDGNQIDETVDVTIDARISIAMEKWFHYLQTMPK 110
           ARDTTSDGTNLGDTTSDGNQIDETVDVTIDARISIAMEKWFHYLQTMPK
Sbjct: 61  ARDTTSDGTNLGDTTSDGNQIDETVDVTIDARISIAMEKWFHYLQTMPK 109

The following BLAST results are available for this feature:

BLAST of MELO3C025216 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK09778.1	3.4e-91	100.00	hypothetical protein E5676_scaffold127G00670 [Cucumis melo var. makuwa]	[more]
KAA0025395.1	9.0e-52	95.41	uncharacterized protein E6C27_scaffold1220G00260 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C025216 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C025216 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CEX3	1.6e-91	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SLQ3	4.4e-52	95.41	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MELO3C025216 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025216.1	MELO3C025216.1	mRNA