MELO3C025176 (gene) Melon (DHL92) v4

Overview
NameMELO3C025176
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionAcyl-CoA-binding domain-containing protein 4 isoform X2
Locationchr10: 9160284 .. 9160707 (+)
RNA-Seq ExpressionMELO3C025176
SyntenyMELO3C025176
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGGTTTTGGATCTGAGAAGCTGGGCTTGGAAAAAACTTGAGGCTATGACCCAGTCTCCGGAATCACCTCCTGAAAAGCTAACTCCCTGTGCTGGTCATTCATTGGTCAGTGGACATGTATTTATTTTTAATTTTTGCATATGTTTGCTTGTATGTGGTCATATTTTTTCTTCCTATTGTGATGTATTAGTCTACCTGTCTTTGTCATAGTCATACTTCCAAATGCGATAGCATTTATTGGGAATGCCATCTTTTTACTTGATATCAATATCAACATTGCTATAATGTCAGATTTCTTATCTACCTTATTTGACTGTAGATACCATGGGAGAACAAACTTTTATCAGTAGTTGGTCATACTAAGGATTCTTTTGATGCTATTCAGGGTACAAATGTCGTGCTTTTGCCCTATTATTCACCTTAG

mRNA sequence

TAGGTTTTGGATCTGAGAAGCTGGGCTTGGAAAAAACTTGAGGCTATGACCCAGTCTCCGGAATCACCTCCTGAAAAGCTAACTCCCTGTGCTGGTCATTCATTGATACCATGGGAGAACAAACTTTTATCAGTAGTTGGTCATACTAAGGATTCTTTTGATGCTATTCAGGGTACAAATGTCGTGCTTTTGCCCTATTATTCACCTTAG

Coding sequence (CDS)

ATGACCCAGTCTCCGGAATCACCTCCTGAAAAGCTAACTCCCTGTGCTGGTCATTCATTGATACCATGGGAGAACAAACTTTTATCAGTAGTTGGTCATACTAAGGATTCTTTTGATGCTATTCAGGGTACAAATGTCGTGCTTTTGCCCTATTATTCACCTTAG

Protein sequence

MTQSPESPPEKLTPCAGHSLIPWENKLLSVVGHTKDSFDAIQGTNVVLLPYYSP
Homology
[Close]
BLAST of MELO3C025176 vs. NCBI nr
Match: KAA0037412.1 (acyl-CoA-binding domain-containing protein 4 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 117.9 bits (294), Expect = 2.8e-23
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0 

Query: 1   MTQSPESPPEKLTPCAGHSLIPWENKLLSVVGHTKDSFDAIQGTNVVLLPYYSP 55
           MTQSPESPPEKLTPCAGHSLIPWENKLLSVVGHTKDSFDAIQGTNVVLLPYYSP
Sbjct: 59  MTQSPESPPEKLTPCAGHSLIPWENKLLSVVGHTKDSFDAIQGTNVVLLPYYSP 112

[Close]
BLAST of MELO3C025176 vs. NCBI nr
Match: KAA0049863.1 (acyl-CoA-binding domain-containing protein 4 isoform X2 [Cucumis melo var. makuwa] >TYK21129.1 acyl-CoA-binding domain-containing protein 4 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 109.4 bits (272), Expect = 9.9e-21
Identity = 50/53 (94.34%), Postives = 50/53 (94.34%), Query Frame = 0 

Query: 2  TQSPESPPEKLTPCAGHSLIPWENKLLSVVGHTKDSFDAIQGTNVVLLPYYSP 55
          TQSPESPPEKLTPCAGHSLIPWENKLLSV GHTKD  DAIQGTNVVLLPYYSP
Sbjct: 26 TQSPESPPEKLTPCAGHSLIPWENKLLSVAGHTKDPSDAIQGTNVVLLPYYSP 78

[Close]
BLAST of MELO3C025176 vs. NCBI nr
Match: KAA0052045.1 (acyl-CoA-binding domain-containing protein 4 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 102.1 bits (253), Expect = 1.6e-18
Identity = 48/53 (90.57%), Postives = 48/53 (90.57%), Query Frame = 0 

Query: 2  TQSPESPPEKLTPCAGHSLIPWENKLLSVVGHTKDSFDAIQGTNVVLLPYYSP 55
          TQSPESPPEKLTPCAGHSLIPWENKLLSV G TKD   AIQGTNVVLLPYYSP
Sbjct: 38 TQSPESPPEKLTPCAGHSLIPWENKLLSVAGPTKDPCYAIQGTNVVLLPYYSP 90

[Close]
BLAST of MELO3C025176 vs. NCBI nr
Match: TYK15086.1 (acyl-CoA-binding domain-containing protein 4 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 102.1 bits (253), Expect = 1.6e-18
Identity = 48/53 (90.57%), Postives = 48/53 (90.57%), Query Frame = 0 

Query: 2  TQSPESPPEKLTPCAGHSLIPWENKLLSVVGHTKDSFDAIQGTNVVLLPYYSP 55
          TQSPESPPEKLTPCAGHSLIPWENKLLSV G TKD   AIQGTNVVLLPYYSP
Sbjct: 26 TQSPESPPEKLTPCAGHSLIPWENKLLSVAGPTKDPCYAIQGTNVVLLPYYSP 78

[Close]
BLAST of MELO3C025176 vs. NCBI nr
Match: XP_004144782.1 (acyl-CoA-binding domain-containing protein 4 isoform X1 [Cucumis sativus] >KGN60945.1 hypothetical protein Csa_021287 [Cucumis sativus])

HSP 1 Score: 84.0 bits (206), Expect = 4.5e-13
Identity = 38/41 (92.68%), Postives = 38/41 (92.68%), Query Frame = 0 

Query: 2   TQSPESPPEKLTPCAGHSLIPWENKLLSVVGHTKDSFDAIQ 43
           TQSPESPPEKLTPCAGHSLIPWENKLLSV GHTKD  DAIQ
Sbjct: 233 TQSPESPPEKLTPCAGHSLIPWENKLLSVAGHTKDPSDAIQ 273

[Close]
BLAST of MELO3C025176 vs. ExPASy Swiss-Prot
Match: Q9MA55 (Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=ACBP4 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.2e-07
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 0 

Query: 2   TQSPE-SPPEKLTPCAGHSLIPWENKLLSVVGHTKDSFDAIQ 43
           T+S E S P  L PCAGHSLI W+NKLLS+ GHTKD  +++Q
Sbjct: 230 TESQETSTPTLLAPCAGHSLIAWDNKLLSIGGHTKDPSESMQ 271

[Close]
BLAST of MELO3C025176 vs. ExPASy Swiss-Prot
Match: Q8RWD9 (Acyl-CoA-binding domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=ACBP5 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.2e-07
Identity = 23/35 (65.71%), Postives = 29/35 (82.86%), Query Frame = 0 

Query: 7   SPPEKLTPCAGHSLIPWENKLLSVVGHTKDSFDAI 42
           S P KLT CAGHSLIPW+N+LLS+ GHTKD  +++
Sbjct: 237 SSPAKLTHCAGHSLIPWDNQLLSIGGHTKDPSESM 271

[Close]
BLAST of MELO3C025176 vs. ExPASy Swiss-Prot
Match: Q75LJ4 (Acyl-CoA-binding domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ACBP6 PE=2 SV=1)

HSP 1 Score: 43.9 bits (102), Expect = 6.7e-04
Identity = 19/35 (54.29%), Postives = 23/35 (65.71%), Query Frame = 0 

Query: 7   SPPEKLTPCAGHSLIPWENKLLSVVGHTKDSFDAI 42
           S   +++ CAGHSLI W NK  SV GHTKD  + I
Sbjct: 235 SKSAQVSSCAGHSLISWGNKFFSVAGHTKDPSENI 269

[Close]
BLAST of MELO3C025176 vs. ExPASy TrEMBL
Match: A0A5A7T1S9 (Acyl-CoA-binding domain-containing protein 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold278G001240 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.4e-23
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0 

Query: 1   MTQSPESPPEKLTPCAGHSLIPWENKLLSVVGHTKDSFDAIQGTNVVLLPYYSP 55
           MTQSPESPPEKLTPCAGHSLIPWENKLLSVVGHTKDSFDAIQGTNVVLLPYYSP
Sbjct: 59  MTQSPESPPEKLTPCAGHSLIPWENKLLSVVGHTKDSFDAIQGTNVVLLPYYSP 112

[Close]
BLAST of MELO3C025176 vs. ExPASy TrEMBL
Match: A0A5A7U1V5 (Acyl-CoA-binding domain-containing protein 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4197G00040 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.8e-21
Identity = 50/53 (94.34%), Postives = 50/53 (94.34%), Query Frame = 0 

Query: 2  TQSPESPPEKLTPCAGHSLIPWENKLLSVVGHTKDSFDAIQGTNVVLLPYYSP 55
          TQSPESPPEKLTPCAGHSLIPWENKLLSV GHTKD  DAIQGTNVVLLPYYSP
Sbjct: 26 TQSPESPPEKLTPCAGHSLIPWENKLLSVAGHTKDPSDAIQGTNVVLLPYYSP 78

[Close]
BLAST of MELO3C025176 vs. ExPASy TrEMBL
Match: A0A5A7UEA6 (Acyl-CoA-binding domain-containing protein 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold578G00010 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 7.7e-19
Identity = 48/53 (90.57%), Postives = 48/53 (90.57%), Query Frame = 0 

Query: 2  TQSPESPPEKLTPCAGHSLIPWENKLLSVVGHTKDSFDAIQGTNVVLLPYYSP 55
          TQSPESPPEKLTPCAGHSLIPWENKLLSV G TKD   AIQGTNVVLLPYYSP
Sbjct: 38 TQSPESPPEKLTPCAGHSLIPWENKLLSVAGPTKDPCYAIQGTNVVLLPYYSP 90

[Close]
BLAST of MELO3C025176 vs. ExPASy TrEMBL
Match: A0A5D3CXB3 (Acyl-CoA-binding domain-containing protein 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold259G00080 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 7.7e-19
Identity = 48/53 (90.57%), Postives = 48/53 (90.57%), Query Frame = 0 

Query: 2  TQSPESPPEKLTPCAGHSLIPWENKLLSVVGHTKDSFDAIQGTNVVLLPYYSP 55
          TQSPESPPEKLTPCAGHSLIPWENKLLSV G TKD   AIQGTNVVLLPYYSP
Sbjct: 26 TQSPESPPEKLTPCAGHSLIPWENKLLSVAGPTKDPCYAIQGTNVVLLPYYSP 78

[Close]
BLAST of MELO3C025176 vs. ExPASy TrEMBL
Match: A0A0A0LFW3 (ACB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G030060 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.2e-13
Identity = 38/41 (92.68%), Postives = 38/41 (92.68%), Query Frame = 0 

Query: 2   TQSPESPPEKLTPCAGHSLIPWENKLLSVVGHTKDSFDAIQ 43
           TQSPESPPEKLTPCAGHSLIPWENKLLSV GHTKD  DAIQ
Sbjct: 233 TQSPESPPEKLTPCAGHSLIPWENKLLSVAGHTKDPSDAIQ 273

[Close]
BLAST of MELO3C025176 vs. TAIR 10
Match: AT3G05420.1 (acyl-CoA binding protein 4 )

HSP 1 Score: 55.5 bits (132), Expect = 1.6e-08
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 0 

Query: 2   TQSPE-SPPEKLTPCAGHSLIPWENKLLSVVGHTKDSFDAIQ 43
           T+S E S P  L PCAGHSLI W+NKLLS+ GHTKD  +++Q
Sbjct: 230 TESQETSTPTLLAPCAGHSLIAWDNKLLSIGGHTKDPSESMQ 271

[Close]
BLAST of MELO3C025176 vs. TAIR 10
Match: AT3G05420.2 (acyl-CoA binding protein 4 )

HSP 1 Score: 55.5 bits (132), Expect = 1.6e-08
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 0 

Query: 2   TQSPE-SPPEKLTPCAGHSLIPWENKLLSVVGHTKDSFDAIQ 43
           T+S E S P  L PCAGHSLI W+NKLLS+ GHTKD  +++Q
Sbjct: 231 TESQETSTPTLLAPCAGHSLIAWDNKLLSIGGHTKDPSESMQ 272

[Close]
BLAST of MELO3C025176 vs. TAIR 10
Match: AT5G27630.1 (acyl-CoA binding protein 5 )

HSP 1 Score: 55.5 bits (132), Expect = 1.6e-08
Identity = 23/35 (65.71%), Postives = 29/35 (82.86%), Query Frame = 0 

Query: 7   SPPEKLTPCAGHSLIPWENKLLSVVGHTKDSFDAI 42
           S P KLT CAGHSLIPW+N+LLS+ GHTKD  +++
Sbjct: 237 SSPAKLTHCAGHSLIPWDNQLLSIGGHTKDPSESM 271

The following BLAST results are available for this feature:
BLAST of MELO3C025176 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0037412.12.8e-23100.00acyl-CoA-binding domain-containing protein 4 isoform X2 [Cucumis melo var. makuw... [more]
KAA0049863.19.9e-2194.34acyl-CoA-binding domain-containing protein 4 isoform X2 [Cucumis melo var. makuw... [more]
KAA0052045.11.6e-1890.57acyl-CoA-binding domain-containing protein 4 isoform X2 [Cucumis melo var. makuw... [more]
TYK15086.11.6e-1890.57acyl-CoA-binding domain-containing protein 4 isoform X2 [Cucumis melo var. makuw... [more]
XP_004144782.14.5e-1392.68acyl-CoA-binding domain-containing protein 4 isoform X1 [Cucumis sativus] >KGN60... [more]
BLAST of MELO3C025176 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9MA552.2e-0761.90Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=... [more]
Q8RWD92.2e-0765.71Acyl-CoA-binding domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=... [more]
Q75LJ46.7e-0454.29Acyl-CoA-binding domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=... [more]
BLAST of MELO3C025176 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7T1S91.4e-23100.00Acyl-CoA-binding domain-containing protein 4 isoform X2 OS=Cucumis melo var. mak... [more]
A0A5A7U1V54.8e-2194.34Acyl-CoA-binding domain-containing protein 4 isoform X2 OS=Cucumis melo var. mak... [more]
A0A5A7UEA67.7e-1990.57Acyl-CoA-binding domain-containing protein 4 isoform X2 OS=Cucumis melo var. mak... [more]
A0A5D3CXB37.7e-1990.57Acyl-CoA-binding domain-containing protein 4 isoform X2 OS=Cucumis melo var. mak... [more]
A0A0A0LFW32.2e-1392.68ACB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G030060 PE=3 SV... [more]
BLAST of MELO3C025176 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G05420.11.6e-0861.90acyl-CoA binding protein 4 [more]
AT3G05420.21.6e-0861.90acyl-CoA binding protein 4 [more]
AT5G27630.11.6e-0865.71acyl-CoA binding protein 5 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025176.1MELO3C025176.1mRNA