MELO3C024899 (gene) Melon (DHL92) v4

Overview
NameMELO3C024899
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Description30S ribosomal protein S10
Locationchr01: 11218735 .. 11221230 (-)
RNA-Seq ExpressionMELO3C024899
SyntenyMELO3C024899
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACACACACACAAATTGGAAATTTATTTAGATAACGCTGCAGAAAAAATCATCCATTTCTTTCAGCTTCCGCCATCGATATTCAAAGCAACTTCCATGGCTATTTCTTCACTCTCTGCTACTATAATTCCATCTCCTACTCTATTTACTTCTTTATCATCCCATTCTTCTAAACCCAAATTTCTTCCCTTTCCTGGTTCATCTTCTACTGCTTTGAAGCTCAAACCCCTTCAATTTTCCTTGCCATCCACAAGGGTTTATGCTGCTCCTGAAGTTCTAGACTCCTCCGATACCATTGAACCACCTCCGGAAATCTTGGAGGGCTCTGGAGTTGCCACTCTCGAGGTTTGTGATAATTTTGTTCGGAATGGAGCAAAATGTTACAATTTTTCTTGGTTTTGTAATGGGTGTAAGAATGTTTGTTCTGGGTTATTTTTCCCTCCTTTTTTAAAATTTCCATTTTGTTTTCAATTGCATTGGAACTTGGACAATGTTTCTGTTTTATTTTTTCTTTTTTTCTTTGCTAATGTTATGTTTATGTTTAGGGTGAAGATTTTGAGGTTCCTGGGACTTCAGCTCTCAGCATTGGTGAGGATGTGGATAAGGTAGATTTTATGTTTTTCAGATTACGTTTTACTCCAGCTTCTTGTGGCTTTCTGAAGATATAATATGTTATGCTGAGATACTTCTGATATCCAAACTGAACTCTTGAATATATATTGGTTCTGACGAGTTAAAGAAAGAATGGCCAGAAAATACATAATGGAATTATTTAATGAGATTATATTAGTATCTTCATTTGTCATTCTGCTAAGTTGAGTGGGTAAAGTCATATGCAAAATTTACATTTTATGTATAGTTGTAGTGTTGCCTTAGAAGCTAATAACATGCTTGGGAGTAATTCTAAAATGGTTTAAATCATTTTTTTCATTTTCAAAACCACTCCAAAAATGCTTTTAATAATTCAAAATCAATTTTAATAGTATGAGAGCTGCGCCTAAGACTAGAGTATATAATTAAACATTGAATTGACTAGAGTATATAATTTTAAAGTGATTCTGAATAATGATAAAAATGATTCTAAATATTTCAAAATCACTCACAAACATGCACAAAACAAGGTGATTAATCTAATGCAATATTGAAAGTTTCTAATGTAGTGGGATTGGGTGGAATGTGGCAGTTCCATATTCCTTTGTATCCTAAAACAACCTCCTCAACCGGGTAGGGTATAGTCATTGACAATTGCTCCAGTGGCTGAATTTCTGTGACATTTGGCCCACTAGGATAATAGATATATGTATACACATTGGTACAAAATTGTGCTTTTACTGAAATAAACAAAAGAATACAAGGGCATACAAGTTTAGGATTCAAATACGAAAGAACAAGGACAAGATCATAGGTAAAAGAGGCCTAGCGAGCAAAGTTCAAGAGATGCCTAGAACCGAACCACTTCCGAAAATGGGTACCAAGATAGTCATTTTGTACCTTTATATTTACTGAACGTCGTTGTAGTTTTCAGTAAGTCTCAATGCTGTGTTATTTGATTTGTTTGATTATCTGTGTGGTAGGTGTGTCTAGATACTTGTGTCAGCTAATTGGTTTTGTAATTGATAGCCTCCATCTTTTTCTTATGCTTGGATAATTTTAACGAACCAAAGATGTTTGTGGTTTCAGCTGGCGCCGAAGCAGAAAATTAGAATTAAACTAAGGTCTTACTGGGTTCCACTCATTGAAGATTCTTGCAAGCAAATAATGGATGCTGCAAGGAATACAAATGCAAAAACCATGGGTCCTGTGCCATTACCTACAAAAAAGCGCATTTATTGTGTTCTTAAATCCCCTCATGTTCATAAGGATGCAAGATTCCATTTTGAAATCAGAACCCACCAACGCCTCATTGATATTTTGTACCCTACTGCCCAAACGATTGATTCTTTGATGCAACTCGACCTTCCAGCTGGTGTTGACGTGGAGGTCAAGCTATGAAGAGAACAGCTTCACCTAGGTAAAGAATTTAGTTTCCATAAGTTTATTATATATGGTGGTATTCCTTTTACTGCAATAAAGAAACAGGAAAGTTGGCCATAGGTACGAGGCAGAAAAGGAAGTGACATTTCAAGTTTATGTCTTGATAGAGCTGGGGTGAAAAAAGAGAGAAAATTTGGCCTTTGTTTTGATCATATCATATTACTAAGAAATAAAAGAATGAGTTGGAAGGAATGTTTTGTTTGAATTTTTTCCTTGTATTTGAGGGGAGGGGCTTTATTTGTTTTGGGTTCACATATAATTGTCTTTACCTAGCGCAAGGAAAAATTGAAAAACCGAAAAAACCACTTGATGGTGTCAGGTTGAAAATATTTATTAAAAATCTGCAAAACTTTTCGTTACGGTTTGGGTTAGGCAAAATAATAAACTGAGAAAACCTAAATGTCAAAAGAAGGCTCATGTGTGTCATGTTCCCACCTCCTCGAGCTGCCAATATCTCTCATGTA

mRNA sequence

ACACACACACAAATTGGAAATTTATTTAGATAACGCTGCAGAAAAAATCATCCATTTCTTTCAGCTTCCGCCATCGATATTCAAAGCAACTTCCATGGCTATTTCTTCACTCTCTGCTACTATAATTCCATCTCCTACTCTATTTACTTCTTTATCATCCCATTCTTCTAAACCCAAATTTCTTCCCTTTCCTGGTTCATCTTCTACTGCTTTGAAGCTCAAACCCCTTCAATTTTCCTTGCCATCCACAAGGGTTTATGCTGCTCCTGAAGTTCTAGACTCCTCCGATACCATTGAACCACCTCCGGAAATCTTGGAGGGCTCTGGAGTTGCCACTCTCGAGGGTGAAGATTTTGAGGTTCCTGGGACTTCAGCTCTCAGCATTGGTGAGGATGTGGATAAGCTGGCGCCGAAGCAGAAAATTAGAATTAAACTAAGGTCTTACTGGGTTCCACTCATTGAAGATTCTTGCAAGCAAATAATGGATGCTGCAAGGAATACAAATGCAAAAACCATGGGTCCTGTGCCATTACCTACAAAAAAGCGCATTTATTGTGTTCTTAAATCCCCTCATGTTCATAAGGATGCAAGATTCCATTTTGAAATCAGAACCCACCAACGCCTCATTGATATTTTGTACCCTACTGCCCAAACGATTGATTCTTTGATGCAACTCGACCTTCCAGCTGGTGTTGACGTGGAGGTCAAGCTATGAAGAGAACAGCTTCACCTAGGTAAAGAATTTAGTTTCCATAAGTTTATTATATATGGTGGTATTCCTTTTACTGCAATAAAGAAACAGGAAAGTTGGCCATAGGTACGAGGCAGAAAAGGAAGTGACATTTCAAGTTTATGTCTTGATAGAGCTGGGGTGAAAAAAGAGAGAAAATTTGGCCTTTGTTTTGATCATATCATATTACTAAGAAATAAAAGAATGAGTTGGAAGGAATGTTTTGTTTGAATTTTTTCCTTGTATTTGAGGGGAGGGGCTTTATTTGTTTTGGGTTCACATATAATTGTCTTTACCTAGCGCAAGGAAAAATTGAAAAACCGAAAAAACCACTTGATGGTGTCAGGTTGAAAATATTTATTAAAAATCTGCAAAACTTTTCGTTACGGTTTGGGTTAGGCAAAATAATAAACTGAGAAAACCTAAATGTCAAAAGAAGGCTCATGTGTGTCATGTTCCCACCTCCTCGAGCTGCCAATATCTCTCATGTA

Coding sequence (CDS)

CACACACACAAATTGGAAATTTATTTAGATAACGCTGCAGAAAAAATCATCCATTTCTTTCAGCTTCCGCCATCGATATTCAAAGCAACTTCCATGGCTATTTCTTCACTCTCTGCTACTATAATTCCATCTCCTACTCTATTTACTTCTTTATCATCCCATTCTTCTAAACCCAAATTTCTTCCCTTTCCTGGTTCATCTTCTACTGCTTTGAAGCTCAAACCCCTTCAATTTTCCTTGCCATCCACAAGGGTTTATGCTGCTCCTGAAGTTCTAGACTCCTCCGATACCATTGAACCACCTCCGGAAATCTTGGAGGGCTCTGGAGTTGCCACTCTCGAGGGTGAAGATTTTGAGGTTCCTGGGACTTCAGCTCTCAGCATTGGTGAGGATGTGGATAAGCTGGCGCCGAAGCAGAAAATTAGAATTAAACTAAGGTCTTACTGGGTTCCACTCATTGAAGATTCTTGCAAGCAAATAATGGATGCTGCAAGGAATACAAATGCAAAAACCATGGGTCCTGTGCCATTACCTACAAAAAAGCGCATTTATTGTGTTCTTAAATCCCCTCATGTTCATAAGGATGCAAGATTCCATTTTGAAATCAGAACCCACCAACGCCTCATTGATATTTTGTACCCTACTGCCCAAACGATTGATTCTTTGATGCAACTCGACCTTCCAGCTGGTGTTGACGTGGAGGTCAAGCTATGA

Protein sequence

HTHKLEIYLDNAAEKIIHFFQLPPSIFKATSMAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSSSTALKLKPLQFSLPSTRVYAAPEVLDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL
Homology
[Close]
BLAST of MELO3C024899 vs. NCBI nr
Match: XP_008462962.2 (PREDICTED: 30S ribosomal protein S10, chloroplastic [Cucumis melo])

HSP 1 Score: 402.1 bits (1032), Expect = 3.3e-108
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0 

Query: 32  MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSSSTALKLKPLQFSLPSTRVYAAPEV 91
           MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSSSTALKLKPLQFSLPSTRVYAAPEV
Sbjct: 1   MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSSSTALKLKPLQFSLPSTRVYAAPEV 60

Query: 92  LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP 151
           LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP
Sbjct: 61  LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP 120

Query: 152 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 211
           LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI
Sbjct: 121 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180

Query: 212 LYPTAQTIDSLMQLDLPAGVDVEVKL 238
           LYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 206

[Close]
BLAST of MELO3C024899 vs. NCBI nr
Match: XP_004150471.1 (30S ribosomal protein S10, chloroplastic [Cucumis sativus] >XP_011651997.1 30S ribosomal protein S10, chloroplastic [Cucumis sativus] >XP_031744994.1 30S ribosomal protein S10, chloroplastic [Cucumis sativus] >KAE8645988.1 hypothetical protein Csa_015449 [Cucumis sativus])

HSP 1 Score: 391.3 bits (1004), Expect = 5.7e-105
Identity = 200/206 (97.09%), Postives = 202/206 (98.06%), Query Frame = 0 

Query: 32  MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSSSTALKLKPLQFSLPSTRVYAAPEV 91
           MAISSLSATIIPSPTLFTSLSSHSSKPKF PFP SSSTALKLKPLQFS PSTR+YAAPEV
Sbjct: 1   MAISSLSATIIPSPTLFTSLSSHSSKPKFPPFPASSSTALKLKPLQFSFPSTRLYAAPEV 60

Query: 92  LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP 151
           LDS DTIEPPPEILEGSGV+TLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP
Sbjct: 61  LDSPDTIEPPPEILEGSGVSTLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP 120

Query: 152 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 211
           LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI
Sbjct: 121 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180

Query: 212 LYPTAQTIDSLMQLDLPAGVDVEVKL 238
           LYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 206

[Close]
BLAST of MELO3C024899 vs. NCBI nr
Match: XP_038899555.1 (30S ribosomal protein S10, chloroplastic [Benincasa hispida] >XP_038899556.1 30S ribosomal protein S10, chloroplastic [Benincasa hispida])

HSP 1 Score: 388.7 bits (997), Expect = 3.7e-104
Identity = 199/206 (96.60%), Postives = 201/206 (97.57%), Query Frame = 0 

Query: 32  MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSSSTALKLKPLQFSLPSTRVYAAPEV 91
           MAISSLSATIIPSPTLF+SLSSHSSKPK LPF G SSTALKLKPLQFSLP+TRVY APEV
Sbjct: 1   MAISSLSATIIPSPTLFSSLSSHSSKPKLLPFSGLSSTALKLKPLQFSLPTTRVYVAPEV 60

Query: 92  LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP 151
           LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSAL IGEDVDKLAPKQKIRIKLRSYWVP
Sbjct: 61  LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALGIGEDVDKLAPKQKIRIKLRSYWVP 120

Query: 152 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 211
           LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI
Sbjct: 121 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180

Query: 212 LYPTAQTIDSLMQLDLPAGVDVEVKL 238
           LYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 206

[Close]
BLAST of MELO3C024899 vs. NCBI nr
Match: XP_022935934.1 (30S ribosomal protein S10, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 369.0 bits (946), Expect = 3.0e-98
Identity = 190/206 (92.23%), Postives = 193/206 (93.69%), Query Frame = 0 

Query: 32  MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSSSTALKLKPLQFSLPSTRVYAAPEV 91
           MAISSLSATIIPSP+LF  LSS   KP+FLPF GSSSTALKLKPL FSLPS+RVYAAPEV
Sbjct: 1   MAISSLSATIIPSPSLFVPLSSLHPKPRFLPFSGSSSTALKLKPLHFSLPSSRVYAAPEV 60

Query: 92  LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP 151
           LDSSD  EPPPEILE SG ATLEGEDFE PGTSA SIGEDVDKLAPKQKIRIKLRSYWVP
Sbjct: 61  LDSSDANEPPPEILEDSGAATLEGEDFEAPGTSAFSIGEDVDKLAPKQKIRIKLRSYWVP 120

Query: 152 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 211
           LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI
Sbjct: 121 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180

Query: 212 LYPTAQTIDSLMQLDLPAGVDVEVKL 238
           LYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 206

[Close]
BLAST of MELO3C024899 vs. NCBI nr
Match: KAG7024950.1 (30S ribosomal protein S10, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 369.0 bits (946), Expect = 3.0e-98
Identity = 190/206 (92.23%), Postives = 193/206 (93.69%), Query Frame = 0 

Query: 32  MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSSSTALKLKPLQFSLPSTRVYAAPEV 91
           MAISSLSATIIPSP+LF  LSS   KP+FLPF GSSSTALKLKPL FSLPS+RVYAAPEV
Sbjct: 1   MAISSLSATIIPSPSLFVPLSSLHPKPRFLPFSGSSSTALKLKPLHFSLPSSRVYAAPEV 60

Query: 92  LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP 151
           LDSSD  EPPPEILE SG ATLEGEDFE PGTSA SIGEDVDKLAPKQKIRIKLRSYWVP
Sbjct: 61  LDSSDANEPPPEILEDSGTATLEGEDFEAPGTSAFSIGEDVDKLAPKQKIRIKLRSYWVP 120

Query: 152 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 211
           LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI
Sbjct: 121 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180

Query: 212 LYPTAQTIDSLMQLDLPAGVDVEVKL 238
           LYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 206

[Close]
BLAST of MELO3C024899 vs. ExPASy Swiss-Prot
Match: Q9M4Y3 (30S ribosomal protein S10, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 GN=RPS10 PE=2 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 4.3e-63
Identity = 142/212 (66.98%), Postives = 157/212 (74.06%), Query Frame = 0 

Query: 32  MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSSSTALKLKPLQFSLPST------RV 91
           MA SSLS TI+ SP   ++ SS  +KP+       SS +   + L  S PS+      RV
Sbjct: 1   MATSSLS-TIVFSPLALSNSSSFPNKPQVSNLSLHSSLSNLRRTLSHSSPSSSSSSNVRV 60

Query: 92  YAAPEVLDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKL 151
           +AAPEVL+S +T  P   + EGS              TSAL IG D D++APKQKIRIKL
Sbjct: 61  FAAPEVLESQET-GPESYVEEGS-------------ETSALGIGADSDQMAPKQKIRIKL 120

Query: 152 RSYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTH 211
           RSYWVPLIEDSCKQIMDAAR TNAKTMGPVPLPTKKRI+CVLKSPHVHKDARFHFEIRTH
Sbjct: 121 RSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIFCVLKSPHVHKDARFHFEIRTH 180

Query: 212 QRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 238
           QRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 QRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 197

[Close]
BLAST of MELO3C024899 vs. ExPASy Swiss-Prot
Match: Q9LK61 (30S ribosomal protein S10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS10 PE=2 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.4e-61
Identity = 136/211 (64.45%), Postives = 160/211 (75.83%), Query Frame = 0 

Query: 32  MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSS-----STALKLKPLQFSLPSTRVY 91
           MA+S++S+ ++PS  +  S S  S++ K    P SS     S+ +  KP   S+  T+V+
Sbjct: 1   MAVSTVSSFLLPSFGI-PSSSPSSTRLKVSLLPSSSTHGGLSSCVLTKP---SVSLTKVF 60

Query: 92  AAPEVLDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLR 151
           A P      DT++P PEIL+            EVP +S++S+  D DK+APKQKIRIKLR
Sbjct: 61  AVP------DTLDPTPEILDEPA--------SEVPSSSSISV--DADKMAPKQKIRIKLR 120

Query: 152 SYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ 211
           SYWVPLIEDSCKQI+DAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ
Sbjct: 121 SYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ 180

Query: 212 RLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 238
           R+IDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 RMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 191

[Close]
BLAST of MELO3C024899 vs. ExPASy Swiss-Prot
Match: P82162 (30S ribosomal protein S10 alpha, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPS10 PE=1 SV=2)

HSP 1 Score: 220.3 bits (560), Expect = 2.3e-56
Identity = 130/211 (61.61%), Postives = 146/211 (69.19%), Query Frame = 0 

Query: 32  MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSSSTALKLKPLQ-----FSLPSTRVY 91
           MA SS+SA ++ SP    + SS S+K  F      +        LQ      +  +   +
Sbjct: 1   MATSSISAALL-SPLTLRNASSSSTKQDFSTLSSLNLRRTLTPTLQSGHTLSNSSNFATF 60

Query: 92  AAPEVLDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLR 151
           AAP  L          E+LE S  +  +G +     TS +SI  D D++APKQKIRIKLR
Sbjct: 61  AAPGAL----------EVLETSPDSFEDGSE-----TSKISIAADSDQMAPKQKIRIKLR 120

Query: 152 SYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ 211
           SYWVPLIEDSCKQIMDAAR TNAK MGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ
Sbjct: 121 SYWVPLIEDSCKQIMDAARTTNAKIMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ 180

Query: 212 RLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 238
           RLIDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 RLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 195

[Close]
BLAST of MELO3C024899 vs. ExPASy Swiss-Prot
Match: P17009 (Cyanelle 30S ribosomal protein S10 OS=Cyanophora paradoxa OX=2762 GN=rps10 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.0e-32
Identity = 65/98 (66.33%), Postives = 86/98 (87.76%), Query Frame = 0 

Query: 140 KIRIKLRSYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFH 199
           KIRI+LRSY   L+E+SC+QI++AA+ T+A  +GP+PLPTKK+IYCVL+SPHV KD+R H
Sbjct: 8   KIRIQLRSYDSSLLENSCEQIIEAAKRTDATAVGPIPLPTKKKIYCVLRSPHVDKDSREH 67

Query: 200 FEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 238
           FEIR H+R+ID+  P+++TID+L +LDLPAGVDVEVKL
Sbjct: 68  FEIRVHRRIIDLYLPSSKTIDTLTRLDLPAGVDVEVKL 105

[Close]
BLAST of MELO3C024899 vs. ExPASy Swiss-Prot
Match: B7K833 (30S ribosomal protein S10 OS=Gloeothece citriformis (strain PCC 7424) OX=65393 GN=rpsJ PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.9e-32
Identity = 62/100 (62.00%), Postives = 86/100 (86.00%), Query Frame = 0 

Query: 138 KQKIRIKLRSYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDAR 197
           +QKIRI+L+++   L++ SC++I+D A  TNA  +GP+PLPTK+R+YCVL+SPHV KD+R
Sbjct: 6   QQKIRIRLKAFDRRLLDTSCEKIVDTANRTNATAIGPIPLPTKRRVYCVLRSPHVDKDSR 65

Query: 198 FHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 238
            HFE RTH+R+IDI  P+++TID+LM+LDLPAGVD+EVKL
Sbjct: 66  EHFETRTHRRIIDIYQPSSKTIDALMKLDLPAGVDIEVKL 105

[Close]
BLAST of MELO3C024899 vs. ExPASy TrEMBL
Match: A0A1S3CI46 (30S ribosomal protein S10, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501224 PE=3 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.6e-108
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0 

Query: 32  MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSSSTALKLKPLQFSLPSTRVYAAPEV 91
           MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSSSTALKLKPLQFSLPSTRVYAAPEV
Sbjct: 1   MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSSSTALKLKPLQFSLPSTRVYAAPEV 60

Query: 92  LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP 151
           LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP
Sbjct: 61  LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP 120

Query: 152 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 211
           LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI
Sbjct: 121 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180

Query: 212 LYPTAQTIDSLMQLDLPAGVDVEVKL 238
           LYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 206

[Close]
BLAST of MELO3C024899 vs. ExPASy TrEMBL
Match: A0A0A0LEH6 (Ribosomal_S10 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G769090 PE=3 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 2.8e-105
Identity = 200/206 (97.09%), Postives = 202/206 (98.06%), Query Frame = 0 

Query: 32  MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSSSTALKLKPLQFSLPSTRVYAAPEV 91
           MAISSLSATIIPSPTLFTSLSSHSSKPKF PFP SSSTALKLKPLQFS PSTR+YAAPEV
Sbjct: 1   MAISSLSATIIPSPTLFTSLSSHSSKPKFPPFPASSSTALKLKPLQFSFPSTRLYAAPEV 60

Query: 92  LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP 151
           LDS DTIEPPPEILEGSGV+TLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP
Sbjct: 61  LDSPDTIEPPPEILEGSGVSTLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP 120

Query: 152 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 211
           LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI
Sbjct: 121 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180

Query: 212 LYPTAQTIDSLMQLDLPAGVDVEVKL 238
           LYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 206

[Close]
BLAST of MELO3C024899 vs. ExPASy TrEMBL
Match: A0A6J1F6U3 (30S ribosomal protein S10, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111442692 PE=3 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.5e-98
Identity = 190/206 (92.23%), Postives = 193/206 (93.69%), Query Frame = 0 

Query: 32  MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSSSTALKLKPLQFSLPSTRVYAAPEV 91
           MAISSLSATIIPSP+LF  LSS   KP+FLPF GSSSTALKLKPL FSLPS+RVYAAPEV
Sbjct: 1   MAISSLSATIIPSPSLFVPLSSLHPKPRFLPFSGSSSTALKLKPLHFSLPSSRVYAAPEV 60

Query: 92  LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP 151
           LDSSD  EPPPEILE SG ATLEGEDFE PGTSA SIGEDVDKLAPKQKIRIKLRSYWVP
Sbjct: 61  LDSSDANEPPPEILEDSGAATLEGEDFEAPGTSAFSIGEDVDKLAPKQKIRIKLRSYWVP 120

Query: 152 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 211
           LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI
Sbjct: 121 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180

Query: 212 LYPTAQTIDSLMQLDLPAGVDVEVKL 238
           LYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 206

[Close]
BLAST of MELO3C024899 vs. ExPASy TrEMBL
Match: A0A6J1J2J9 (30S ribosomal protein S10, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111480677 PE=3 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 4.7e-97
Identity = 188/207 (90.82%), Postives = 192/207 (92.75%), Query Frame = 0 

Query: 31  SMAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSSSTALKLKPLQFSLPSTRVYAAPE 90
           SMAISSLSATIIPSPTLF  +SS SSKPK LPF  SS++  KL PLQFSL STRVYAAPE
Sbjct: 6   SMAISSLSATIIPSPTLFGPISSLSSKPKLLPFSASSTSVSKLNPLQFSLSSTRVYAAPE 65

Query: 91  VLDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWV 150
           VLDS  T EPPPEILEGSG A LEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWV
Sbjct: 66  VLDSPGTFEPPPEILEGSGAAVLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWV 125

Query: 151 PLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLID 210
           PLIEDSCKQI+DAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLID
Sbjct: 126 PLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLID 185

Query: 211 ILYPTAQTIDSLMQLDLPAGVDVEVKL 238
           ILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 186 ILYPTAQTIDSLMQLDLPAGVDVEVKL 212

[Close]
BLAST of MELO3C024899 vs. ExPASy TrEMBL
Match: A0A6J1IGH3 (30S ribosomal protein S10, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111476723 PE=3 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 1.1e-96
Identity = 188/206 (91.26%), Postives = 190/206 (92.23%), Query Frame = 0 

Query: 32  MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSSSTALKLKPLQFSLPSTRVYAAPEV 91
           MAISSLSATIIPSP+LF  LSS   KP FLPF G SSTALKLKPL FSLPS+RVYAAPEV
Sbjct: 1   MAISSLSATIIPSPSLFIPLSSLHPKPTFLPFSGFSSTALKLKPLHFSLPSSRVYAAPEV 60

Query: 92  LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP 151
           LDSSD  EPPPEILE SG A LEGEDFE PGTSA SIGEDVDKLAPKQKIRIKLRSYWVP
Sbjct: 61  LDSSDANEPPPEILEDSGAAILEGEDFEAPGTSAFSIGEDVDKLAPKQKIRIKLRSYWVP 120

Query: 152 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 211
           LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI
Sbjct: 121 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180

Query: 212 LYPTAQTIDSLMQLDLPAGVDVEVKL 238
           LYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 206

[Close]
BLAST of MELO3C024899 vs. TAIR 10
Match: AT3G13120.1 (Ribosomal protein S10p/S20e family protein )

HSP 1 Score: 237.7 bits (605), Expect = 9.9e-63
Identity = 136/211 (64.45%), Postives = 160/211 (75.83%), Query Frame = 0 

Query: 32  MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSS-----STALKLKPLQFSLPSTRVY 91
           MA+S++S+ ++PS  +  S S  S++ K    P SS     S+ +  KP   S+  T+V+
Sbjct: 1   MAVSTVSSFLLPSFGI-PSSSPSSTRLKVSLLPSSSTHGGLSSCVLTKP---SVSLTKVF 60

Query: 92  AAPEVLDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLR 151
           A P      DT++P PEIL+            EVP +S++S+  D DK+APKQKIRIKLR
Sbjct: 61  AVP------DTLDPTPEILDEPA--------SEVPSSSSISV--DADKMAPKQKIRIKLR 120

Query: 152 SYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ 211
           SYWVPLIEDSCKQI+DAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ
Sbjct: 121 SYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ 180

Query: 212 RLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 238
           R+IDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 RMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 191

[Close]
BLAST of MELO3C024899 vs. TAIR 10
Match: AT3G13120.2 (Ribosomal protein S10p/S20e family protein )

HSP 1 Score: 237.7 bits (605), Expect = 9.9e-63
Identity = 136/211 (64.45%), Postives = 160/211 (75.83%), Query Frame = 0 

Query: 32  MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSS-----STALKLKPLQFSLPSTRVY 91
           MA+S++S+ ++PS  +  S S  S++ K    P SS     S+ +  KP   S+  T+V+
Sbjct: 1   MAVSTVSSFLLPSFGI-PSSSPSSTRLKVSLLPSSSTHGGLSSCVLTKP---SVSLTKVF 60

Query: 92  AAPEVLDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLR 151
           A P      DT++P PEIL+            EVP +S++S+  D DK+APKQKIRIKLR
Sbjct: 61  AVP------DTLDPTPEILDEPA--------SEVPSSSSISV--DADKMAPKQKIRIKLR 120

Query: 152 SYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ 211
           SYWVPLIEDSCKQI+DAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ
Sbjct: 121 SYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ 180

Query: 212 RLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 238
           R+IDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 RMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 191

The following BLAST results are available for this feature:
BLAST of MELO3C024899 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008462962.23.3e-108100.00PREDICTED: 30S ribosomal protein S10, chloroplastic [Cucumis melo][more]
XP_004150471.15.7e-10597.0930S ribosomal protein S10, chloroplastic [Cucumis sativus] >XP_011651997.1 30S r... [more]
XP_038899555.13.7e-10496.6030S ribosomal protein S10, chloroplastic [Benincasa hispida] >XP_038899556.1 30S... [more]
XP_022935934.13.0e-9892.2330S ribosomal protein S10, chloroplastic-like [Cucurbita moschata][more]
KAG7024950.13.0e-9892.2330S ribosomal protein S10, chloroplastic, partial [Cucurbita argyrosperma subsp.... [more]
BLAST of MELO3C024899 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M4Y34.3e-6366.9830S ribosomal protein S10, chloroplastic OS=Mesembryanthemum crystallinum OX=354... [more]
Q9LK611.4e-6164.4530S ribosomal protein S10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS1... [more]
P821622.3e-5661.6130S ribosomal protein S10 alpha, chloroplastic OS=Spinacia oleracea OX=3562 GN=R... [more]
P170091.0e-3266.33Cyanelle 30S ribosomal protein S10 OS=Cyanophora paradoxa OX=2762 GN=rps10 PE=3 ... [more]
B7K8333.9e-3262.0030S ribosomal protein S10 OS=Gloeothece citriformis (strain PCC 7424) OX=65393 G... [more]
BLAST of MELO3C024899 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CI461.6e-108100.0030S ribosomal protein S10, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501224... [more]
A0A0A0LEH62.8e-10597.09Ribosomal_S10 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G7690... [more]
A0A6J1F6U31.5e-9892.2330S ribosomal protein S10, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A6J1J2J94.7e-9790.8230S ribosomal protein S10, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A6J1IGH31.1e-9691.2630S ribosomal protein S10, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC... [more]
BLAST of MELO3C024899 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G13120.19.9e-6364.45Ribosomal protein S10p/S20e family protein [more]
AT3G13120.29.9e-6364.45Ribosomal protein S10p/S20e family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001848Ribosomal protein S10PRINTSPR00971RIBOSOMALS10coord: 175..190
score: 53.37
coord: 140..153
score: 42.58
coord: 196..210
score: 52.82
IPR001848Ribosomal protein S10TIGRFAMTIGR01049TIGR01049coord: 139..236
e-value: 1.7E-39
score: 132.1
IPR001848Ribosomal protein S10PANTHERPTHR1170030S RIBOSOMAL PROTEIN S10 FAMILY MEMBERcoord: 32..237
IPR001848Ribosomal protein S10HAMAPMF_00508Ribosomal_S10coord: 138..237
score: 24.177229
IPR027486Ribosomal protein S10 domainSMARTSM01403Ribosomal_S10_2coord: 142..236
e-value: 3.9E-51
score: 185.9
IPR027486Ribosomal protein S10 domainPFAMPF00338Ribosomal_S10coord: 142..236
e-value: 2.7E-32
score: 110.9
IPR036838Ribosomal protein S10 domain superfamilyGENE3D3.30.70.600Ribosomal protein S10 domaincoord: 129..237
e-value: 5.3E-41
score: 141.2
IPR036838Ribosomal protein S10 domain superfamilySUPERFAMILY54999Ribosomal protein S10coord: 140..237
NoneNo IPR availablePANTHERPTHR11700:SF31BNAC05G40270D PROTEINcoord: 32..237
IPR018268Ribosomal protein S10, conserved sitePROSITEPS00361RIBOSOMAL_S10coord: 164..179

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C024899.1MELO3C024899.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome