MELO3C024893 (gene) Melon (DHL92) v4

Overview


Name	MELO3C024893
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	1-aminocyclopropane-1-carboxylate synthase
Location	chr01: 11308447 .. 11308596 (+)
RNA-Seq Expression	MELO3C024893
Synteny	MELO3C024893

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATGTTGTCTACTAAAGCTAGCCATGATTCTCGTGGACAAAATCCCTCCTACTTCTTTGGATGGCAAGAGTACGAGAAGAACCCTTATCACCCTACTCAAAACCCCACCGGCATTATCCAAATGGCTCTTGCCGAAAACAAGTAA

mRNA sequence

ATGGGAATGTTGTCTACTAAAGCTAGCCATGATTCTCGTGGACAAAATCCCTCCTACTTCTTTGGATGGCAAGAGTACGAGAAGAACCCTTATCACCCTACTCAAAACCCCACCGGCATTATCCAAATGGCTCTTGCCGAAAACAAGTAA

Coding sequence (CDS)

ATGGGAATGTTGTCTACTAAAGCTAGCCATGATTCTCGTGGACAAAATCCCTCCTACTTCTTTGGATGGCAAGAGTACGAGAAGAACCCTTATCACCCTACTCAAAACCCCACCGGCATTATCCAAATGGCTCTTGCCGAAAACAAGTAA

Protein sequence

MGMLSTKASHDSRGQNPSYFFGWQEYEKNPYHPTQNPTGIIQMALAENK

Homology

[Close]

BLAST of MELO3C024893 vs. NCBI nr
Match: KAA0060976.1 (1-aminocyclopropane-1-carboxylate synthase CMA101-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 97.4 bits (241), Expect = 3.5e-17
Identity = 43/49 (87.76%), Postives = 45/49 (91.84%), Query Frame = 0


Query: 1  MGMLSTKASHDSRGQNPSYFFGWQEYEKNPYHPTQNPTGIIQMALAENK 50
          M MLSTKASHDS GQN SYFFGWQEYEKNPYHPTQNP+GIIQM LAEN+
Sbjct: 2  MAMLSTKASHDSHGQNSSYFFGWQEYEKNPYHPTQNPSGIIQMGLAENR 50

[Close]

BLAST of MELO3C024893 vs. NCBI nr
Match: XP_038886265.1 (1-aminocyclopropane-1-carboxylate synthase CMA101-like [Benincasa hispida])

HSP 1 Score: 96.7 bits (239), Expect = 6.0e-17
Identity = 43/49 (87.76%), Postives = 45/49 (91.84%), Query Frame = 0


Query: 1  MGMLSTKASHDSRGQNPSYFFGWQEYEKNPYHPTQNPTGIIQMALAENK 50
          M MLSTKASHDS GQ+ SYFFGWQEYEKNPYHPT+NPTGIIQM LAENK
Sbjct: 2  MAMLSTKASHDSHGQDSSYFFGWQEYEKNPYHPTRNPTGIIQMGLAENK 50

[Close]

BLAST of MELO3C024893 vs. NCBI nr
Match: XP_008445556.2 (PREDICTED: 1-aminocyclopropane-1-carboxylate synthase CMA101-like isoform X1 [Cucumis melo])

HSP 1 Score: 95.9 bits (237), Expect = 1.0e-16
Identity = 42/49 (85.71%), Postives = 44/49 (89.80%), Query Frame = 0


Query: 1  MGMLSTKASHDSRGQNPSYFFGWQEYEKNPYHPTQNPTGIIQMALAENK 50
          M MLSTKA HDS GQN SYFFGWQEYEKNPYHPTQNP+GIIQM LAEN+
Sbjct: 2  MAMLSTKAGHDSHGQNSSYFFGWQEYEKNPYHPTQNPSGIIQMGLAENR 50

[Close]

BLAST of MELO3C024893 vs. NCBI nr
Match: ALN38792.1 (ACS11 [Cucumis melo])

HSP 1 Score: 95.9 bits (237), Expect = 1.0e-16
Identity = 42/49 (85.71%), Postives = 44/49 (89.80%), Query Frame = 0


Query: 1  MGMLSTKASHDSRGQNPSYFFGWQEYEKNPYHPTQNPTGIIQMALAENK 50
          M MLSTKA HDS GQN SYFFGWQEYEKNPYHPTQNP+GIIQM LAEN+
Sbjct: 1  MAMLSTKAGHDSHGQNSSYFFGWQEYEKNPYHPTQNPSGIIQMGLAENR 49

[Close]

BLAST of MELO3C024893 vs. NCBI nr
Match: XP_022131648.1 (1-aminocyclopropane-1-carboxylate synthase CMA101-like [Momordica charantia])

HSP 1 Score: 93.6 bits (231), Expect = 5.1e-16
Identity = 41/49 (83.67%), Postives = 45/49 (91.84%), Query Frame = 0


Query: 1  MGMLSTKASHDSRGQNPSYFFGWQEYEKNPYHPTQNPTGIIQMALAENK 50
          M MLS+KASHDS GQ+ SYFFGWQEYEKNPYHPT+NPTGIIQM LAEN+
Sbjct: 1  MAMLSSKASHDSHGQDSSYFFGWQEYEKNPYHPTRNPTGIIQMGLAENE 49

[Close]

BLAST of MELO3C024893 vs. ExPASy Swiss-Prot
Match: Q9T065 (1-aminocyclopropane-1-carboxylate synthase 8 OS=Arabidopsis thaliana OX=3702 GN=ACS8 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.6e-12
Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = 0


Query: 1  MGMLSTKASHDSRGQNPSYFFGWQEYEKNPYHPTQNPTGIIQMALAENK 50
          MG+LS KAS ++ GQ+ SYF+GW+EYEKNPY   +NP GIIQM LAEN+
Sbjct: 1  MGLLSKKASCNTHGQDSSYFWGWEEYEKNPYDEIKNPDGIIQMGLAENQ 49

[Close]

BLAST of MELO3C024893 vs. ExPASy Swiss-Prot
Match: Q00257 (1-aminocyclopropane-1-carboxylate synthase CMA101 OS=Cucurbita maxima OX=3661 GN=ACS2 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 2.1e-12
Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 0


Query: 1  MGMLSTKASHDSRGQNPSYFFGWQEYEKNPYHPTQNPTGIIQMALAENK 50
          M MLSTKA+ +S GQ+ SYF GW+ YE NP+H T NP GIIQM LAEN+
Sbjct: 1  MKMLSTKATCNSHGQDSSYFLGWEAYENNPFHHTSNPNGIIQMGLAENQ 49

[Close]

BLAST of MELO3C024893 vs. ExPASy Swiss-Prot
Match: Q42881 (1-aminocyclopropane-1-carboxylate synthase 3 OS=Solanum lycopersicum OX=4081 GN=ACS3 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.7e-12
Identity = 33/49 (67.35%), Postives = 38/49 (77.55%), Query Frame = 0


Query: 1  MGMLSTKASHDSRGQNPSYFFGWQEYEKNPYHPTQNPTGIIQMALAENK 50
          M +LS KA+ +S GQ+ SYF GWQEYEKNPY   QNP GIIQM LAEN+
Sbjct: 1  MKLLSEKATCNSHGQDSSYFLGWQEYEKNPYDEIQNPKGIIQMGLAENQ 49

[Close]

BLAST of MELO3C024893 vs. ExPASy Swiss-Prot
Match: A2XLL2 (1-aminocyclopropane-1-carboxylate synthase 1 OS=Oryza sativa subsp. indica OX=39946 GN=ACC1 PE=2 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 4.7e-12
Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 3  MLSTKASHDSRGQNPSYFFGWQEYEKNPYHPTQNPTGIIQMALAENK 50
          +LS KA  +S GQ+ SYF GWQEYEKNP+ P  NP+GIIQM LAEN+
Sbjct: 13 LLSKKAGCNSHGQDSSYFLGWQEYEKNPFDPVSNPSGIIQMGLAENQ 59

[Close]

BLAST of MELO3C024893 vs. ExPASy Swiss-Prot
Match: Q10DK7 (1-aminocyclopropane-1-carboxylate synthase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ACC1 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 4.7e-12
Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 3  MLSTKASHDSRGQNPSYFFGWQEYEKNPYHPTQNPTGIIQMALAENK 50
          +LS KA  +S GQ+ SYF GWQEYEKNP+ P  NP+GIIQM LAEN+
Sbjct: 13 LLSKKAGCNSHGQDSSYFLGWQEYEKNPFDPVSNPSGIIQMGLAENQ 59

[Close]

BLAST of MELO3C024893 vs. ExPASy TrEMBL
Match: A0A5A7V392 (1-aminocyclopropane-1-carboxylate synthase CMA101-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001110 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.7e-17
Identity = 43/49 (87.76%), Postives = 45/49 (91.84%), Query Frame = 0


Query: 1  MGMLSTKASHDSRGQNPSYFFGWQEYEKNPYHPTQNPTGIIQMALAENK 50
          M MLSTKASHDS GQN SYFFGWQEYEKNPYHPTQNP+GIIQM LAEN+
Sbjct: 2  MAMLSTKASHDSHGQNSSYFFGWQEYEKNPYHPTQNPSGIIQMGLAENR 50

[Close]

BLAST of MELO3C024893 vs. ExPASy TrEMBL
Match: A0A1S3BD08 (1-aminocyclopropane-1-carboxylate synthase CMA101-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488536 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.0e-17
Identity = 42/49 (85.71%), Postives = 44/49 (89.80%), Query Frame = 0


Query: 1  MGMLSTKASHDSRGQNPSYFFGWQEYEKNPYHPTQNPTGIIQMALAENK 50
          M MLSTKA HDS GQN SYFFGWQEYEKNPYHPTQNP+GIIQM LAEN+
Sbjct: 2  MAMLSTKAGHDSHGQNSSYFFGWQEYEKNPYHPTQNPSGIIQMGLAENR 50

[Close]

BLAST of MELO3C024893 vs. ExPASy TrEMBL
Match: A0A0S2C3P7 (ACS11 OS=Cucumis melo OX=3656 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.0e-17
Identity = 42/49 (85.71%), Postives = 44/49 (89.80%), Query Frame = 0


Query: 1  MGMLSTKASHDSRGQNPSYFFGWQEYEKNPYHPTQNPTGIIQMALAENK 50
          M MLSTKA HDS GQN SYFFGWQEYEKNPYHPTQNP+GIIQM LAEN+
Sbjct: 1  MAMLSTKAGHDSHGQNSSYFFGWQEYEKNPYHPTQNPSGIIQMGLAENR 49

[Close]

BLAST of MELO3C024893 vs. ExPASy TrEMBL
Match: A0A6J1BU08 (1-aminocyclopropane-1-carboxylate synthase CMA101-like OS=Momordica charantia OX=3673 GN=LOC111004776 PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.5e-16
Identity = 41/49 (83.67%), Postives = 45/49 (91.84%), Query Frame = 0


Query: 1  MGMLSTKASHDSRGQNPSYFFGWQEYEKNPYHPTQNPTGIIQMALAENK 50
          M MLS+KASHDS GQ+ SYFFGWQEYEKNPYHPT+NPTGIIQM LAEN+
Sbjct: 1  MAMLSSKASHDSHGQDSSYFFGWQEYEKNPYHPTRNPTGIIQMGLAENE 49

[Close]

BLAST of MELO3C024893 vs. ExPASy TrEMBL
Match: Q71T07 (1-aminocyclopropane-1-carboxylate synthase OS=Momordica charantia OX=3673 GN=ACS2 PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.5e-16
Identity = 41/49 (83.67%), Postives = 45/49 (91.84%), Query Frame = 0


Query: 1  MGMLSTKASHDSRGQNPSYFFGWQEYEKNPYHPTQNPTGIIQMALAENK 50
          M MLS+KASHDS GQ+ SYFFGWQEYEKNPYHPT+NPTGIIQM LAEN+
Sbjct: 1  MAMLSSKASHDSHGQDSSYFFGWQEYEKNPYHPTRNPTGIIQMGLAENE 49

[Close]

BLAST of MELO3C024893 vs. TAIR 10
Match: AT4G37770.1 (1-amino-cyclopropane-1-carboxylate synthase 8 )

HSP 1 Score: 72.4 bits (176), Expect = 1.1e-13
Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = 0


Query: 1  MGMLSTKASHDSRGQNPSYFFGWQEYEKNPYHPTQNPTGIIQMALAENK 50
          MG+LS KAS ++ GQ+ SYF+GW+EYEKNPY   +NP GIIQM LAEN+
Sbjct: 1  MGLLSKKASCNTHGQDSSYFWGWEEYEKNPYDEIKNPDGIIQMGLAENQ 49

[Close]

BLAST of MELO3C024893 vs. TAIR 10
Match: AT4G08040.1 (1-aminocyclopropane-1-carboxylate synthase 11 )

HSP 1 Score: 68.9 bits (167), Expect = 1.3e-12
Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 3  MLSTKASHDSRGQNPSYFFGWQEYEKNPYHPTQNPTGIIQMALAENK 50
          MLS+K   DS GQ+ SYF GWQEYEKNP+H + N +GI+QM LAEN+
Sbjct: 1  MLSSKVVGDSHGQDSSYFLGWQEYEKNPFHESFNTSGIVQMGLAENQ 47

[Close]

BLAST of MELO3C024893 vs. TAIR 10
Match: AT2G22810.1 (1-aminocyclopropane-1-carboxylate synthase 4 )

HSP 1 Score: 68.2 bits (165), Expect = 2.1e-12
Identity = 32/49 (65.31%), Postives = 37/49 (75.51%), Query Frame = 0


Query: 1  MGMLSTKASHDSRGQNPSYFFGWQEYEKNPYHPTQNPTGIIQMALAENK 50
          M  LS KA+ +S GQ  SYF GW+EYEKNPY  T+NP GIIQM LAEN+
Sbjct: 1  MVQLSRKATCNSHGQVSSYFLGWEEYEKNPYDVTKNPQGIIQMGLAENQ 49

[Close]

BLAST of MELO3C024893 vs. TAIR 10
Match: AT5G65800.1 (ACC synthase 5 )

HSP 1 Score: 67.4 bits (163), Expect = 3.7e-12
Identity = 29/49 (59.18%), Postives = 36/49 (73.47%), Query Frame = 0


Query: 1  MGMLSTKASHDSRGQNPSYFFGWQEYEKNPYHPTQNPTGIIQMALAENK 50
          M  LSTK + +  GQ+ SYF GW+EYEKNPY   +NP G+IQM LAEN+
Sbjct: 1  MKQLSTKVTSNGHGQDSSYFLGWEEYEKNPYDEIKNPNGMIQMGLAENQ 49

[Close]

BLAST of MELO3C024893 vs. TAIR 10
Match: AT3G49700.1 (1-aminocyclopropane-1-carboxylate synthase 9 )

HSP 1 Score: 66.6 bits (161), Expect = 6.2e-12
Identity = 29/49 (59.18%), Postives = 36/49 (73.47%), Query Frame = 0


Query: 1  MGMLSTKASHDSRGQNPSYFFGWQEYEKNPYHPTQNPTGIIQMALAENK 50
          M  LS K + ++ GQ+ SYF GW+EYEKNPY   +NP GIIQM LAEN+
Sbjct: 1  MKQLSRKVTSNAHGQDSSYFLGWEEYEKNPYDEIKNPNGIIQMGLAENQ 49

The following BLAST results are available for this feature:

BLAST of MELO3C024893 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060976.1	3.5e-17	87.76	1-aminocyclopropane-1-carboxylate synthase CMA101-like isoform X1 [Cucumis melo ...	[more]
XP_038886265.1	6.0e-17	87.76	1-aminocyclopropane-1-carboxylate synthase CMA101-like [Benincasa hispida]	[more]
XP_008445556.2	1.0e-16	85.71	PREDICTED: 1-aminocyclopropane-1-carboxylate synthase CMA101-like isoform X1 [Cu...	[more]
ALN38792.1	1.0e-16	85.71	ACS11 [Cucumis melo]	[more]
XP_022131648.1	5.1e-16	83.67	1-aminocyclopropane-1-carboxylate synthase CMA101-like [Momordica charantia]	[more]

BLAST of MELO3C024893 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9T065	1.6e-12	65.31	1-aminocyclopropane-1-carboxylate synthase 8 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q00257	2.1e-12	65.31	1-aminocyclopropane-1-carboxylate synthase CMA101 OS=Cucurbita maxima OX=3661 GN...	[more]
Q42881	2.7e-12	67.35	1-aminocyclopropane-1-carboxylate synthase 3 OS=Solanum lycopersicum OX=4081 GN=...	[more]
A2XLL2	4.7e-12	65.96	1-aminocyclopropane-1-carboxylate synthase 1 OS=Oryza sativa subsp. indica OX=39...	[more]
Q10DK7	4.7e-12	65.96	1-aminocyclopropane-1-carboxylate synthase 1 OS=Oryza sativa subsp. japonica OX=...	[more]

BLAST of MELO3C024893 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V392	1.7e-17	87.76	1-aminocyclopropane-1-carboxylate synthase CMA101-like isoform X1 OS=Cucumis mel...	[more]
A0A1S3BD08	5.0e-17	85.71	1-aminocyclopropane-1-carboxylate synthase CMA101-like isoform X1 OS=Cucumis mel...	[more]
A0A0S2C3P7	5.0e-17	85.71	ACS11 OS=Cucumis melo OX=3656 PE=3 SV=1	[more]
A0A6J1BU08	2.5e-16	83.67	1-aminocyclopropane-1-carboxylate synthase CMA101-like OS=Momordica charantia OX...	[more]
Q71T07	2.5e-16	83.67	1-aminocyclopropane-1-carboxylate synthase OS=Momordica charantia OX=3673 GN=ACS...	[more]

BLAST of MELO3C024893 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37770.1	1.1e-13	65.31	1-amino-cyclopropane-1-carboxylate synthase 8	[more]
AT4G08040.1	1.3e-12	63.83	1-aminocyclopropane-1-carboxylate synthase 11	[more]
AT2G22810.1	2.1e-12	65.31	1-aminocyclopropane-1-carboxylate synthase 4	[more]
AT5G65800.1	3.7e-12	59.18	ACC synthase 5	[more]
AT3G49700.1	6.2e-12	59.18	1-aminocyclopropane-1-carboxylate synthase 9	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015422	Pyridoxal phosphate-dependent transferase, small domain	GENE3D	3.90.1150.10	Aspartate Aminotransferase, domain 1	coord: 1..49 e-value: 9.9E-16 score: 59.9
None	No IPR available	PANTHER	PTHR43795	BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED	coord: 1..49
None	No IPR available	PANTHER	PTHR43795:SF10	1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 9	coord: 1..49

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C024893.1	MELO3C024893.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity