MELO3C024773 (gene) Melon (DHL92) v4

Overview
NameMELO3C024773
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionProtein MNN4-like
Locationchr11: 8041737 .. 8041919 (+)
RNA-Seq ExpressionMELO3C024773
SyntenyMELO3C024773
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAAGGGACAAAAAGTGGATTTTAGGCCAAGCGCGATAAACGGGCTCTATGGTTTAGAAAGCAATGAAATGGGACATGCAATTTTCAAAAACCCATTAGAGCAAGACCTGGAAGACGCATTAAAAAGAGTAGCTTGGCCCGAGACAAAATGGGATAAAACACCTATAGGGAAGTACTAA

mRNA sequence

ATGGTGAAGGGACAAAAAGTGGATTTTAGGCCAAGCGCGATAAACGGGCTCTATGGTTTAGAAAGCAATGAAATGGGACATGCAATTTTCAAAAACCCATTAGAGCAAGACCTGGAAGACGCATTAAAAAGAGTAGCTTGGCCCGAGACAAAATGGGATAAAACACCTATAGGGAAGTACTAA

Coding sequence (CDS)

ATGGTGAAGGGACAAAAAGTGGATTTTAGGCCAAGCGCGATAAACGGGCTCTATGGTTTAGAAAGCAATGAAATGGGACATGCAATTTTCAAAAACCCATTAGAGCAAGACCTGGAAGACGCATTAAAAAGAGTAGCTTGGCCCGAGACAAAATGGGATAAAACACCTATAGGGAAGTACTAA

Protein sequence

MVKGQKVDFRPSAINGLYGLESNEMGHAIFKNPLEQDLEDALKRVAWPETKWDKTPIGKY
Homology
BLAST of MELO3C024773 vs. NCBI nr
Match: KAA0057652.1 (hypothetical protein E6C27_scaffold43054G00260 [Cucumis melo var. makuwa] >TYK19535.1 hypothetical protein E5676_scaffold416G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 99.0 bits (245), Expect = 1.5e-17
Identity = 44/60 (73.33%), Postives = 50/60 (83.33%), Query Frame = 0

Query: 1  MVKGQKVDFRPSAINGLYGLESNEMGHAIFKNPLEQDLEDALKRVAWPETKWDKTPIGKY 60
          MV+G+KVDF P AIN L+GLE+ E+ HAIFKNP E+DLEDALKRVAWP TKWD  P GKY
Sbjct: 1  MVEGKKVDFGPDAINQLFGLEAKEIEHAIFKNPQERDLEDALKRVAWPRTKWDIMPTGKY 60

BLAST of MELO3C024773 vs. NCBI nr
Match: TYK25886.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 97.1 bits (240), Expect = 5.7e-17
Identity = 40/60 (66.67%), Postives = 49/60 (81.67%), Query Frame = 0

Query: 1   MVKGQKVDFRPSAINGLYGLESNEMGHAIFKNPLEQDLEDALKRVAWPETKWDKTPIGKY 60
           M+KG+KV FRP  IN LY L+ N +GHAIFKNP +QD++DAL RV+WP TKWD+TP GKY
Sbjct: 195 MIKGKKVYFRPEVINALYRLDDNVIGHAIFKNPTQQDMQDALARVSWPGTKWDRTPTGKY 254

BLAST of MELO3C024773 vs. NCBI nr
Match: KAA0045357.1 (hypothetical protein E6C27_scaffold316G001360 [Cucumis melo var. makuwa])

HSP 1 Score: 92.4 bits (228), Expect = 1.4e-15
Identity = 40/60 (66.67%), Postives = 47/60 (78.33%), Query Frame = 0

Query: 1  MVKGQKVDFRPSAINGLYGLESNEMGHAIFKNPLEQDLEDALKRVAWPETKWDKTPIGKY 60
          MV  +KVDF P AIN  YGL+ NE+GHAIFKNP EQ+L++ L RVAWP TKWD+TP  KY
Sbjct: 25 MVNEKKVDFGPDAINMFYGLDDNEIGHAIFKNPKEQNLQEGLTRVAWPGTKWDRTPTRKY 84

BLAST of MELO3C024773 vs. NCBI nr
Match: TYK23866.1 (hypothetical protein E5676_scaffold419G00400 [Cucumis melo var. makuwa])

HSP 1 Score: 91.7 bits (226), Expect = 2.4e-15
Identity = 42/60 (70.00%), Postives = 47/60 (78.33%), Query Frame = 0

Query: 1  MVKGQKVDFRPSAINGLYGLESNEMGHAIFKNPLEQDLEDALKRVAWPETKWDKTPIGKY 60
          MVK QK+DF P+AINGL+GLE+NE+GH IFKN  EQDLEDA   VAW   KWD TP GKY
Sbjct: 25 MVKWQKLDFGPNAINGLFGLEANELGHTIFKNLQEQDLEDASITVAWSGIKWDITPTGKY 84

BLAST of MELO3C024773 vs. NCBI nr
Match: KAA0041933.1 (hypothetical protein E6C27_scaffold67G003500 [Cucumis melo var. makuwa] >TYK17865.1 hypothetical protein E5676_scaffold306G001360 [Cucumis melo var. makuwa])

HSP 1 Score: 89.0 bits (219), Expect = 1.5e-14
Identity = 41/60 (68.33%), Postives = 46/60 (76.67%), Query Frame = 0

Query: 1  MVKGQKVDFRPSAINGLYGLESNEMGHAIFKNPLEQDLEDALKRVAWPETKWDKTPIGKY 60
          MVKG KVDFR   IN  +GLE+NE+GHAIFKNP E+DLE ALKRVAW  TKWD T   +Y
Sbjct: 15 MVKGHKVDFRLDTINAFFGLETNEIGHAIFKNPQERDLEYALKRVAWSGTKWDITITRRY 74

BLAST of MELO3C024773 vs. ExPASy TrEMBL
Match: A0A5D3D7L3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold416G00290 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 7.2e-18
Identity = 44/60 (73.33%), Postives = 50/60 (83.33%), Query Frame = 0

Query: 1  MVKGQKVDFRPSAINGLYGLESNEMGHAIFKNPLEQDLEDALKRVAWPETKWDKTPIGKY 60
          MV+G+KVDF P AIN L+GLE+ E+ HAIFKNP E+DLEDALKRVAWP TKWD  P GKY
Sbjct: 1  MVEGKKVDFGPDAINQLFGLEAKEIEHAIFKNPQERDLEDALKRVAWPRTKWDIMPTGKY 60

BLAST of MELO3C024773 vs. ExPASy TrEMBL
Match: A0A5D3DQE5 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G001110 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.7e-17
Identity = 40/60 (66.67%), Postives = 49/60 (81.67%), Query Frame = 0

Query: 1   MVKGQKVDFRPSAINGLYGLESNEMGHAIFKNPLEQDLEDALKRVAWPETKWDKTPIGKY 60
           M+KG+KV FRP  IN LY L+ N +GHAIFKNP +QD++DAL RV+WP TKWD+TP GKY
Sbjct: 195 MIKGKKVYFRPEVINALYRLDDNVIGHAIFKNPTQQDMQDALARVSWPGTKWDRTPTGKY 254

BLAST of MELO3C024773 vs. ExPASy TrEMBL
Match: A0A5A7TU45 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001360 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 6.8e-16
Identity = 40/60 (66.67%), Postives = 47/60 (78.33%), Query Frame = 0

Query: 1  MVKGQKVDFRPSAINGLYGLESNEMGHAIFKNPLEQDLEDALKRVAWPETKWDKTPIGKY 60
          MV  +KVDF P AIN  YGL+ NE+GHAIFKNP EQ+L++ L RVAWP TKWD+TP  KY
Sbjct: 25 MVNEKKVDFGPDAINMFYGLDDNEIGHAIFKNPKEQNLQEGLTRVAWPGTKWDRTPTRKY 84

BLAST of MELO3C024773 vs. ExPASy TrEMBL
Match: A0A5D3DJM3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00400 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-15
Identity = 42/60 (70.00%), Postives = 47/60 (78.33%), Query Frame = 0

Query: 1  MVKGQKVDFRPSAINGLYGLESNEMGHAIFKNPLEQDLEDALKRVAWPETKWDKTPIGKY 60
          MVK QK+DF P+AINGL+GLE+NE+GH IFKN  EQDLEDA   VAW   KWD TP GKY
Sbjct: 25 MVKWQKLDFGPNAINGLFGLEANELGHTIFKNLQEQDLEDASITVAWSGIKWDITPTGKY 84

BLAST of MELO3C024773 vs. ExPASy TrEMBL
Match: A0A5D3D2B5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G001360 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 7.5e-15
Identity = 41/60 (68.33%), Postives = 46/60 (76.67%), Query Frame = 0

Query: 1  MVKGQKVDFRPSAINGLYGLESNEMGHAIFKNPLEQDLEDALKRVAWPETKWDKTPIGKY 60
          MVKG KVDFR   IN  +GLE+NE+GHAIFKNP E+DLE ALKRVAW  TKWD T   +Y
Sbjct: 15 MVKGHKVDFRLDTINAFFGLETNEIGHAIFKNPQERDLEYALKRVAWSGTKWDITITRRY 74

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0057652.11.5e-1773.33hypothetical protein E6C27_scaffold43054G00260 [Cucumis melo var. makuwa] >TYK19... [more]
TYK25886.15.7e-1766.67protein MNN4-like [Cucumis melo var. makuwa][more]
KAA0045357.11.4e-1566.67hypothetical protein E6C27_scaffold316G001360 [Cucumis melo var. makuwa][more]
TYK23866.12.4e-1570.00hypothetical protein E5676_scaffold419G00400 [Cucumis melo var. makuwa][more]
KAA0041933.11.5e-1468.33hypothetical protein E6C27_scaffold67G003500 [Cucumis melo var. makuwa] >TYK1786... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3D7L37.2e-1873.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DQE52.7e-1766.67Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00... [more]
A0A5A7TU456.8e-1666.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3DJM31.2e-1570.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3D2B57.5e-1568.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C024773.1MELO3C024773.1mRNA