MELO3C024732 (gene) Melon (DHL92) v4

Overview


Name	MELO3C024732
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	disease resistance protein RGA2-like
Location	chr11: 7240097 .. 7241182 (-)
RNA-Seq Expression	MELO3C024732
Synteny	MELO3C024732

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTACTCCACATAAATTGTTTATGAAGATCTTCGACAAAAGGTCCATACAAGGAAAATGAAGAAGGTATGCGATTTCTTTTCTCCTTCAAGCAATGCTTTCATCTTTCGTCTTAACATGGCGAAAAAAATGATGACTCTTGTAGAATTGTTAGAAAAGCATTACAATGAGGCTGCTCCTTTAGGACTAGTGGTGAATGAAAATGCAAGACCAGAGATCGATGTTATTAGTCAATATCGAGAGACAATTTCAAAACTCGAAGATCATAAGATTGTGGGGAGGGATGTTGAAGTTGAAAGTATAGTGAAACACGTGATTGATGCTAGCAATAATCAATTTACATCTATCCTACCCATTGTTGGTATGGGTGGATTAGGAAAAACAACTTTGGCAAAGTTAGTTTTCAACCATGAGTTGGTTAGACAACATTTTGATAAAACTGTATGGGTATGTGTCTCTGAACCATTTATTGTCAACAAGATTTTGTTAGATATTTTACAAAATCTAAAAGGGCACTTCTAATGGAGGGGATAGTAAGGAGGTTTTACTTCGTGAACTCCAAAAAGAGATGCTTGGCCAAACATATTTTCTTGTGTTTGACGATGTTTGGAACTAAAATTATTTTCCATGAGATGAATTGAAATATTGTTTGCTCAAGATGACTGGAAACTCTAAGAATAGTATTGTTGTGACTACAAGGATCGTTGAAGTTGCAAAAATCATGTGAACATGTTCTGGTCATCTTTTAAGTAAATTATCTGATGATCAATGTTGGTCCTTGTTTAAAGAAAGTGCAAATCCATATGGACTATCAATGATCACTTCAAACTTGGGGATCATTCAAAAAGAGTTGGTAAAAAAAATTGGTGGCATACCATTGGTTGCACGAGTTTTGGGAAGGGCAGTAAAATTTGAAGGAAATGTTGAGAGATGGGAGAAAATGTTGAAAAATGTGTTAATAACTCCACTGCAAGAGGAAAATTTTGTTTTATCTATATTAAAATTAAGTGTAGATCGTCTACCATCATCTGCATTGAAGCAATGTTTTTCATATTGTTCAATTTTTCCCAAGAATTTTGTGTTTGA

mRNA sequence

ATTTACTCCACATAAATTGTTTATGAAGATCTTCGACAAAAGGTCCATACAAGGAAAATGAAGAAGTCAATATCGAGAGACAATTTCAAAACTCGAAGATCATAAGATTGTGGGGAGGGATGTTGAAGTTGAAAGTATAGTGAAACACGTGATTGATGCTAGCAATAATCAATTTACATCTATCCTACCCATTGTTGGTATGGGTGGATTAGGAAAAACAACTTTGGCAAAGTTAGTTTTCAACCATGAGTTGGTTAGACAACATTTTGATAAAACTGTATGGGTATGTGTCTCTGAACCATTTATTGTCAACAAGATTTTGTTAGATATTTTACAAAATCTAAAAGGGCACTTCTAATGGAGGGGATAGTAAGGAGGTTTTACTTCGTGAACTCCAAAAAGAGATGCTTGGCCAAACATATTTTCTTGTGTTTGACGATGTTTGGAACTAAAATTATTTTCCATGAGATGAATTGAAATATTGTTTGCTCAAGATGACTGGAAACTCTAAGAATAGTATTGTTGTGACTACAAGGATCGTTGAAGTTGCAAAAATCATGTGAACATGTTCTGGTCATCTTTTAAGTAAATTATCTGATGATCAATGTTGGTCCTTGTTTAAAGAAAGTGCAAATCCATATGGACTATCAATGATCACTTCAAACTTGGGGATCATTCAAAAAGAGTTGGTAAAAAAAATTGGTGGCATACCATTGGTTGCACGAGTTTTGGGAAGGGCAGTAAAATTTGAAGGAAATGTTGAGAGATGGGAGAAAATGTTGAAAAATGTGTTAATAACTCCACTGCAAGAGGAAAATTTTGTTTTATCTATATTAAAATTAAGTGTAGATCGTCTACCATCATCTGCATTGAAGCAATGTTTTTCATATTGTTCAATTTTTCCCAAGAATTTTGTGTTTGA

Coding sequence (CDS)

ATGATCACTTCAAACTTGGGGATCATTCAAAAAGAGTTGGTAAAAAAAATTGGTGGCATACCATTGGTTGCACGAGTTTTGGGAAGGGCAGTAAAATTTGAAGGAAATGTTGAGAGATGGGAGAAAATGTTGAAAAATGTGTTAATAACTCCACTGCAAGAGGAAAATTTTGTTTTATCTATATTAAAATTAAGTGTAGATCGTCTACCATCATCTGCATTGAAGCAATGTTTTTCATATTGTTCAATTTTTCCCAAGAATTTTGTGTTT

Protein sequence

MITSNLGIIQKELVKKIGGIPLVARVLGRAVKFEGNVERWEKMLKNVLITPLQEENFVLSILKLSVDRLPSSALKQCFSYCSIFPKNFVF

Homology

[Close]

BLAST of MELO3C024732 vs. NCBI nr
Match: XP_004149742.2 (disease resistance protein RGA2 [Cucumis sativus] >KGN58559.1 hypothetical protein Csa_001108 [Cucumis sativus])

HSP 1 Score: 162.2 bits (409), Expect = 2.1e-36
Identity = 79/89 (88.76%), Postives = 87/89 (97.75%), Query Frame = 0


Query: 2   ITSNLGIIQKELVKKIGGIPLVARVLGRAVKFEGNVERWEKMLKNVLITPLQEENFVLSI 61
           +TSNLGIIQKELVKKIGG+PL ARVLGRAVKFEG+VERWE+MLKNVL TPLQEENFVLSI
Sbjct: 351 MTSNLGIIQKELVKKIGGVPLAARVLGRAVKFEGDVERWEEMLKNVLTTPLQEENFVLSI 410

Query: 62  LKLSVDRLPSSALKQCFSYCSIFPKNFVF 91
           LKLSVDRLPSS++KQCF+YCSIFPK+FVF
Sbjct: 411 LKLSVDRLPSSSVKQCFAYCSIFPKDFVF 439

[Close]

BLAST of MELO3C024732 vs. NCBI nr
Match: XP_011650071.2 (disease resistance protein RGA2 [Cucumis sativus] >KAE8652352.1 hypothetical protein Csa_021786 [Cucumis sativus])

HSP 1 Score: 160.6 bits (405), Expect = 6.3e-36
Identity = 80/89 (89.89%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 2   ITSNLGIIQKELVKKIGGIPLVARVLGRAVKFEGNVERWEKMLKNVLITPLQEENFVLSI 61
           +TSNL IIQKELVKKIGGIPL ARVLGRAVKFEG+VERWE+MLKNVL TPL+EENF+LSI
Sbjct: 350 MTSNLEIIQKELVKKIGGIPLAARVLGRAVKFEGDVERWEEMLKNVLSTPLKEENFILSI 409

Query: 62  LKLSVDRLPSSALKQCFSYCSIFPKNFVF 91
           LKLSVDRLPSSALKQCFSYCSIFPK+FVF
Sbjct: 410 LKLSVDRLPSSALKQCFSYCSIFPKDFVF 438

[Close]

BLAST of MELO3C024732 vs. NCBI nr
Match: ABB91438.1 (R-FOM-2 [Cucumis melo])

HSP 1 Score: 154.1 bits (388), Expect = 5.9e-34
Identity = 76/89 (85.39%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 2   ITSNLGIIQKELVKKIGGIPLVARVLGRAVKFEGNVERWEKMLKNVLITPLQEENFVLSI 61
           +TSNLGIIQKELVKKIGG+PLVARVLGR VKFEG+VE+WE+ LK+VL  P+QEE+FVLSI
Sbjct: 350 MTSNLGIIQKELVKKIGGVPLVARVLGRTVKFEGDVEKWEETLKSVLRIPVQEEDFVLSI 409

Query: 62  LKLSVDRLPSSALKQCFSYCSIFPKNFVF 91
           LKLSVDRLPSSALKQCFSYCSIFPK+FVF
Sbjct: 410 LKLSVDRLPSSALKQCFSYCSIFPKDFVF 438

[Close]

BLAST of MELO3C024732 vs. NCBI nr
Match: KAA0043027.1 (R-FOM-2 [Cucumis melo var. makuwa])

HSP 1 Score: 154.1 bits (388), Expect = 5.9e-34
Identity = 76/89 (85.39%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 2   ITSNLGIIQKELVKKIGGIPLVARVLGRAVKFEGNVERWEKMLKNVLITPLQEENFVLSI 61
           +TSNLGIIQKELVKKIGG+PLVARVLGR VKFEG+VE+WE+ LK+VL  P+QEE+FVLSI
Sbjct: 350 MTSNLGIIQKELVKKIGGVPLVARVLGRTVKFEGDVEKWEETLKSVLRIPVQEEDFVLSI 409

Query: 62  LKLSVDRLPSSALKQCFSYCSIFPKNFVF 91
           LKLSVDRLPSSALKQCFSYCSIFPK+FVF
Sbjct: 410 LKLSVDRLPSSALKQCFSYCSIFPKDFVF 438

[Close]

BLAST of MELO3C024732 vs. NCBI nr
Match: XP_008459150.1 (PREDICTED: putative disease resistance protein RGA3 [Cucumis melo])

HSP 1 Score: 152.5 bits (384), Expect = 1.7e-33
Identity = 75/89 (84.27%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 2   ITSNLGIIQKELVKKIGGIPLVARVLGRAVKFEGNVERWEKMLKNVLITPLQEENFVLSI 61
           +TSNLGIIQKELVKKIGG+PLVA+VLGR VKFEG+VE+WE+ LK+VL  P+QEE+FVLSI
Sbjct: 350 MTSNLGIIQKELVKKIGGVPLVAQVLGRTVKFEGDVEKWEETLKSVLRIPVQEEDFVLSI 409

Query: 62  LKLSVDRLPSSALKQCFSYCSIFPKNFVF 91
           LKLSVDRLPSSALKQCFSYCSIFPK+FVF
Sbjct: 410 LKLSVDRLPSSALKQCFSYCSIFPKDFVF 438

[Close]

BLAST of MELO3C024732 vs. ExPASy Swiss-Prot
Match: Q7XA39 (Putative disease resistance protein RGA4 OS=Solanum bulbocastanum OX=147425 GN=RGA4 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.3e-12
Identity = 36/83 (43.37%), Postives = 54/83 (65.06%), Query Frame = 0


Query: 5   NLGIIQKELVKKIGGIPLVARVLGRAVKFEGNVERWEKMLKNVLITPLQEENFVLSILKL 64
           NL  I KE+VKK GG+PL A+ LG  ++F+     WE +  N + +  Q+E+ +L  L+L
Sbjct: 336 NLVAIGKEIVKKCGGVPLAAKTLGGLLRFKREESEWEHVRDNEIWSLPQDESSILPALRL 395

Query: 65  SVDRLPSSALKQCFSYCSIFPKN 88
           S   LP   L+QCF+YC++FPK+
Sbjct: 396 SYHHLPLD-LRQCFAYCAVFPKD 417

[Close]

BLAST of MELO3C024732 vs. ExPASy Swiss-Prot
Match: Q7XA42 (Putative disease resistance protein RGA1 OS=Solanum bulbocastanum OX=147425 GN=RGA1 PE=2 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 6.5e-12
Identity = 36/86 (41.86%), Postives = 53/86 (61.63%), Query Frame = 0


Query: 2   ITSNLGIIQKELVKKIGGIPLVARVLGRAVKFEGNVERWEKMLKNVLITPLQEENFVLSI 61
           I  NL  I KE+VKK GG+PL A+ LG  ++F+     WE +  + +    Q+E+ +L  
Sbjct: 331 INPNLMAIGKEIVKKCGGVPLAAKTLGGILRFKREEREWEHVRDSPIWNLPQDESSILPA 390

Query: 62  LKLSVDRLPSSALKQCFSYCSIFPKN 88
           L+LS   LP   L+QCF YC++FPK+
Sbjct: 391 LRLSYHHLPLD-LRQCFVYCAVFPKD 415

[Close]

BLAST of MELO3C024732 vs. ExPASy Swiss-Prot
Match: Q7XBQ9 (Disease resistance protein RGA2 OS=Solanum bulbocastanum OX=147425 GN=RGA2 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 6.5e-12
Identity = 37/86 (43.02%), Postives = 54/86 (62.79%), Query Frame = 0


Query: 2   ITSNLGIIQKELVKKIGGIPLVARVLGRAVKFEGNVERWEKMLKNVLITPLQEENFVLSI 61
           I  NL  I KE+VKK GG+PL A+ LG  + F+     WE +  + +    Q+E+ +L  
Sbjct: 332 INPNLVAIGKEIVKKSGGVPLAAKTLGGILCFKREERAWEHVRDSPIWNLPQDESSILPA 391

Query: 62  LKLSVDRLPSSALKQCFSYCSIFPKN 88
           L+LS  +LP   LKQCF+YC++FPK+
Sbjct: 392 LRLSYHQLPLD-LKQCFAYCAVFPKD 416

[Close]

BLAST of MELO3C024732 vs. ExPASy Swiss-Prot
Match: Q7XA40 (Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=RGA3 PE=2 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 6.5e-12
Identity = 35/79 (44.30%), Postives = 51/79 (64.56%), Query Frame = 0


Query: 9   IQKELVKKIGGIPLVARVLGRAVKFEGNVERWEKMLKNVLITPLQEENFVLSILKLSVDR 68
           I KE+VKK GG+PL A+ LG  ++F+     WE +  + +    Q+EN VL  L+LS   
Sbjct: 338 IGKEIVKKCGGVPLAAKTLGGLLRFKREESEWEHVRDSEIWNLPQDENSVLPALRLSYHH 397

Query: 69  LPSSALKQCFSYCSIFPKN 88
           LP   L+QCF+YC++FPK+
Sbjct: 398 LPLD-LRQCFAYCAVFPKD 415

[Close]

BLAST of MELO3C024732 vs. ExPASy Swiss-Prot
Match: Q9LRR4 (Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RPPL1 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.1e-10
Identity = 32/89 (35.96%), Postives = 55/89 (61.80%), Query Frame = 0


Query: 2   ITSNLGIIQKELVKKIGGIPLVARVLGRAVKFEGNVERWEKMLKNVLITPLQEENFVLSI 61
           +   +G + + +V K  G+PL  + LG  ++FEG V  WE++L + +     +++ +L +
Sbjct: 355 LNREIGDLAERIVHKCRGLPLAVKTLGGVLRFEGKVIEWERVLSSRIWDLPADKSNLLPV 414

Query: 62  LKLSVDRLPSSALKQCFSYCSIFPKNFVF 91
           L++S   LP+  LK+CF+YCSIFPK   F
Sbjct: 415 LRVSYYYLPAH-LKRCFAYCSIFPKGHAF 442

[Close]

BLAST of MELO3C024732 vs. ExPASy TrEMBL
Match: A0A0A0LCB5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G684170 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.0e-36
Identity = 79/89 (88.76%), Postives = 87/89 (97.75%), Query Frame = 0


Query: 2   ITSNLGIIQKELVKKIGGIPLVARVLGRAVKFEGNVERWEKMLKNVLITPLQEENFVLSI 61
           +TSNLGIIQKELVKKIGG+PL ARVLGRAVKFEG+VERWE+MLKNVL TPLQEENFVLSI
Sbjct: 351 MTSNLGIIQKELVKKIGGVPLAARVLGRAVKFEGDVERWEEMLKNVLTTPLQEENFVLSI 410

Query: 62  LKLSVDRLPSSALKQCFSYCSIFPKNFVF 91
           LKLSVDRLPSS++KQCF+YCSIFPK+FVF
Sbjct: 411 LKLSVDRLPSSSVKQCFAYCSIFPKDFVF 439

[Close]

BLAST of MELO3C024732 vs. ExPASy TrEMBL
Match: A0A0A0LRE1 (NB-ARC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G435460 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.0e-36
Identity = 80/89 (89.89%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 2   ITSNLGIIQKELVKKIGGIPLVARVLGRAVKFEGNVERWEKMLKNVLITPLQEENFVLSI 61
           +TSNL IIQKELVKKIGGIPL ARVLGRAVKFEG+VERWE+MLKNVL TPL+EENF+LSI
Sbjct: 186 MTSNLEIIQKELVKKIGGIPLAARVLGRAVKFEGDVERWEEMLKNVLSTPLKEENFILSI 245

Query: 62  LKLSVDRLPSSALKQCFSYCSIFPKNFVF 91
           LKLSVDRLPSSALKQCFSYCSIFPK+FVF
Sbjct: 246 LKLSVDRLPSSALKQCFSYCSIFPKDFVF 274

[Close]

BLAST of MELO3C024732 vs. ExPASy TrEMBL
Match: A0A5A7TMK8 (R-FOM-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G001070 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.8e-34
Identity = 76/89 (85.39%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 2   ITSNLGIIQKELVKKIGGIPLVARVLGRAVKFEGNVERWEKMLKNVLITPLQEENFVLSI 61
           +TSNLGIIQKELVKKIGG+PLVARVLGR VKFEG+VE+WE+ LK+VL  P+QEE+FVLSI
Sbjct: 350 MTSNLGIIQKELVKKIGGVPLVARVLGRTVKFEGDVEKWEETLKSVLRIPVQEEDFVLSI 409

Query: 62  LKLSVDRLPSSALKQCFSYCSIFPKNFVF 91
           LKLSVDRLPSSALKQCFSYCSIFPK+FVF
Sbjct: 410 LKLSVDRLPSSALKQCFSYCSIFPKDFVF 438

[Close]

BLAST of MELO3C024732 vs. ExPASy TrEMBL
Match: Q2V727 (R-FOM-2 OS=Cucumis melo OX=3656 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.8e-34
Identity = 76/89 (85.39%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 2   ITSNLGIIQKELVKKIGGIPLVARVLGRAVKFEGNVERWEKMLKNVLITPLQEENFVLSI 61
           +TSNLGIIQKELVKKIGG+PLVARVLGR VKFEG+VE+WE+ LK+VL  P+QEE+FVLSI
Sbjct: 350 MTSNLGIIQKELVKKIGGVPLVARVLGRTVKFEGDVEKWEETLKSVLRIPVQEEDFVLSI 409

Query: 62  LKLSVDRLPSSALKQCFSYCSIFPKNFVF 91
           LKLSVDRLPSSALKQCFSYCSIFPK+FVF
Sbjct: 410 LKLSVDRLPSSALKQCFSYCSIFPKDFVF 438

[Close]

BLAST of MELO3C024732 vs. ExPASy TrEMBL
Match: A0A5D3C5G4 (Putative disease resistance protein RGA3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold70G00190 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 8.2e-34
Identity = 75/89 (84.27%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 2   ITSNLGIIQKELVKKIGGIPLVARVLGRAVKFEGNVERWEKMLKNVLITPLQEENFVLSI 61
           +TSNLGIIQKELVKKIGG+PLVA+VLGR VKFEG+VE+WE+ LK+VL  P+QEE+FVLSI
Sbjct: 350 MTSNLGIIQKELVKKIGGVPLVAQVLGRTVKFEGDVEKWEETLKSVLRIPVQEEDFVLSI 409

Query: 62  LKLSVDRLPSSALKQCFSYCSIFPKNFVF 91
           LKLSVDRLPSSALKQCFSYCSIFPK+FVF
Sbjct: 410 LKLSVDRLPSSALKQCFSYCSIFPKDFVF 438

[Close]

BLAST of MELO3C024732 vs. TAIR 10
Match: AT3G14470.1 (NB-ARC domain-containing disease resistance protein )

HSP 1 Score: 66.2 bits (160), Expect = 1.5e-11
Identity = 32/89 (35.96%), Postives = 55/89 (61.80%), Query Frame = 0


Query: 2   ITSNLGIIQKELVKKIGGIPLVARVLGRAVKFEGNVERWEKMLKNVLITPLQEENFVLSI 61
           +   +G + + +V K  G+PL  + LG  ++FEG V  WE++L + +     +++ +L +
Sbjct: 355 LNREIGDLAERIVHKCRGLPLAVKTLGGVLRFEGKVIEWERVLSSRIWDLPADKSNLLPV 414

Query: 62  LKLSVDRLPSSALKQCFSYCSIFPKNFVF 91
           L++S   LP+  LK+CF+YCSIFPK   F
Sbjct: 415 LRVSYYYLPAH-LKRCFAYCSIFPKGHAF 442

[Close]

BLAST of MELO3C024732 vs. TAIR 10
Match: AT5G63020.1 (Disease resistance protein (CC-NBS-LRR class) family )

HSP 1 Score: 57.4 bits (137), Expect = 6.9e-09
Identity = 29/83 (34.94%), Postives = 47/83 (56.63%), Query Frame = 0


Query: 9   IQKELVKKIGGIPLVARVLGRAVKFEGNVERWEKMLKNVLITPLQE----ENFVLSILKL 68
           + + + KK  G+PL   V+G  + ++  V+ W   + +VL +   E    E+ +L ILK 
Sbjct: 338 VARTVAKKCRGLPLALNVIGETMAYKRTVQEWRSAI-DVLTSSAAEFSGMEDEILPILKY 397

Query: 69  SVDRLPSSALKQCFSYCSIFPKN 88
           S D L S  LK CF YC++FP++
Sbjct: 398 SYDNLKSEQLKLCFQYCALFPED 419

[Close]

BLAST of MELO3C024732 vs. TAIR 10
Match: AT5G43730.1 (Disease resistance protein (CC-NBS-LRR class) family )

HSP 1 Score: 55.5 bits (132), Expect = 2.6e-08
Identity = 30/77 (38.96%), Postives = 45/77 (58.44%), Query Frame = 0


Query: 16  KIGGIPLVARVLGRAVKFEGNVERWEKMLKNVLITPLQE----ENFVLSILKLSVDRLPS 75
           K  G+PL   V+G+A+  +  V+ W   + NVL +P  +    E  +L ILK S D L +
Sbjct: 342 KCHGLPLALNVIGKAMVCKETVQEWRHAI-NVLNSPGHKFPGMEERILPILKFSYDSLKN 401

Query: 76  SALKQCFSYCSIFPKNF 89
             +K CF YCS+FP++F
Sbjct: 402 GEIKLCFLYCSLFPEDF 417

[Close]

BLAST of MELO3C024732 vs. TAIR 10
Match: AT1G61310.1 (LRR and NB-ARC domains-containing disease resistance protein )

HSP 1 Score: 53.9 bits (128), Expect = 7.7e-08
Identity = 29/83 (34.94%), Postives = 46/83 (55.42%), Query Frame = 0


Query: 9   IQKELVKKIGGIPLVARVLGRAVKFEGNVERWEKMLKNVLITPLQE----ENFVLSILKL 68
           + +E+ +K  G+PL   V+G  +  +  V+ WE  + +VL     E    EN +L ILK 
Sbjct: 338 LAREVAQKCRGLPLALNVIGETMASKTMVQEWEYAI-DVLTRSAAEFSGMENKILPILKY 397

Query: 69  SVDRLPSSALKQCFSYCSIFPKN 88
           S D L    +K CF YC++FP++
Sbjct: 398 SYDSLGDEHIKSCFLYCALFPED 419

[Close]

BLAST of MELO3C024732 vs. TAIR 10
Match: AT1G61180.1 (LRR and NB-ARC domains-containing disease resistance protein )

HSP 1 Score: 53.5 bits (127), Expect = 1.0e-07
Identity = 28/83 (33.73%), Postives = 46/83 (55.42%), Query Frame = 0


Query: 9   IQKELVKKIGGIPLVARVLGRAVKFEGNVERWEKMLKNVLITPLQE----ENFVLSILKL 68
           + +E+ +K  G+PL   V+G  +  +  V+ WE  + +V  T   E    +N +L ILK 
Sbjct: 336 LAREVAQKCRGLPLALNVIGETMSSKTMVQEWEHAI-HVFNTSAAEFSDMQNKILPILKY 395

Query: 69  SVDRLPSSALKQCFSYCSIFPKN 88
           S D L    +K CF YC++FP++
Sbjct: 396 SYDSLGDEHIKSCFLYCALFPED 417

The following BLAST results are available for this feature:

BLAST of MELO3C024732 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149742.2	2.1e-36	88.76	disease resistance protein RGA2 [Cucumis sativus] >KGN58559.1 hypothetical prote...	[more]
XP_011650071.2	6.3e-36	89.89	disease resistance protein RGA2 [Cucumis sativus] >KAE8652352.1 hypothetical pro...	[more]
ABB91438.1	5.9e-34	85.39	R-FOM-2 [Cucumis melo]	[more]
KAA0043027.1	5.9e-34	85.39	R-FOM-2 [Cucumis melo var. makuwa]	[more]
XP_008459150.1	1.7e-33	84.27	PREDICTED: putative disease resistance protein RGA3 [Cucumis melo]	[more]

BLAST of MELO3C024732 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XA39	1.3e-12	43.37	Putative disease resistance protein RGA4 OS=Solanum bulbocastanum OX=147425 GN=R...	[more]
Q7XA42	6.5e-12	41.86	Putative disease resistance protein RGA1 OS=Solanum bulbocastanum OX=147425 GN=R...	[more]
Q7XBQ9	6.5e-12	43.02	Disease resistance protein RGA2 OS=Solanum bulbocastanum OX=147425 GN=RGA2 PE=1 ...	[more]
Q7XA40	6.5e-12	44.30	Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=R...	[more]
Q9LRR4	2.1e-10	35.96	Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of MELO3C024732 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCB5	1.0e-36	88.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G684170 PE=4 SV=1	[more]
A0A0A0LRE1	3.0e-36	89.89	NB-ARC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G435460 PE=4...	[more]
A0A5A7TMK8	2.8e-34	85.39	R-FOM-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G001070 PE=4 S...	[more]
Q2V727	2.8e-34	85.39	R-FOM-2 OS=Cucumis melo OX=3656 PE=4 SV=1	[more]
A0A5D3C5G4	8.2e-34	84.27	Putative disease resistance protein RGA3 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of MELO3C024732 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G14470.1	1.5e-11	35.96	NB-ARC domain-containing disease resistance protein	[more]
AT5G63020.1	6.9e-09	34.94	Disease resistance protein (CC-NBS-LRR class) family	[more]
AT5G43730.1	2.6e-08	38.96	Disease resistance protein (CC-NBS-LRR class) family	[more]
AT1G61310.1	7.7e-08	34.94	LRR and NB-ARC domains-containing disease resistance protein	[more]
AT1G61180.1	1.0e-07	33.73	LRR and NB-ARC domains-containing disease resistance protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR042197	Apoptotic protease-activating factors, helical domain	GENE3D	1.10.8.430		coord: 2..70 e-value: 3.7E-5 score: 25.2
IPR044974	Disease resistance protein, plants	PANTHER	PTHR23155	DISEASE RESISTANCE PROTEIN RP	coord: 3..89
None	No IPR available	PANTHER	PTHR23155:SF1139	NBS-LRR TYPE DISEASE RESISTANCE PROTEIN	coord: 3..89
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C024732.1	MELO3C024732.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response