MELO3C024718 (gene) Melon (DHL92) v4

Overview


Name	MELO3C024718
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr11: 7020162 .. 7020674 (-)
RNA-Seq Expression	MELO3C024718
Synteny	MELO3C024718

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGAAAGATGCCAAAACCATTATCCTTTTTGGCTCTCCATTATTATTGATTCTTTTAGCTCTTGAGAAATTATGTTCAAAGTTGGGAGCCTTGGGATAGCTCTTATTATGATTCTAATGGCAATCCCCAACTTTGCTATTTTTGCCGAAAGTAGAATGCTCCGATCAGAAGCCGAGGGTGACGGTGTTAAGGAACATGATGTAGATGAAAAGCCAAAGAGACTAATACCACAGCCGAAAGATTCGAGCAGTAGTGGCAATCGAGTTGTTACGTTGGCTTCAGGACCAAGCAGGAAGGGTGGCGGCCATTAGTCAGAAATGTTATATACCATGTTGATTTTGGCGGAGAATTTGTTGCTTTAATTTTTTTCTTTTTTTCTTTTTTCTTATTGGGATTGTGTGCATGACTTAGAAAAAATTGTTCTCCTCTTTGTTTTCATTCTATTTTGTTATCTTCATAGGTCTCACTTCGTTTGTTAATCACGAGCGGTCGGTCTTAAGTGTTAATCTTTA

mRNA sequence

AAAGAAAGATGCCAAAACCATTATCCTTTTTGGCTCTCCATTATTATTGATTCTTTTAGCTCTTGAGAAATTATGTTCAAAGTTGGGAGCCTTGGGATAGCTCTTATTATGATTCTAATGGCAATCCCCAACTTTGCTATTTTTGCCGAAAGTAGAATGCTCCGATCAGAAGCCGAGGGTGACGGTGTTAAGGAACATGATGTAGATGAAAAGCCAAAGAGACTAATACCACAGCCGAAAGATTCGAGCAGTAGTGGCAATCGAGTTGTTACGTTGGCTTCAGGACCAAGCAGGAAGGGTGGCGGCCATTAGTCAGAAATGTTATATACCATGTTGATTTTGGCGGAGAATTTGTTGCTTTAATTTTTTTCTTTTTTTCTTTTTTCTTATTGGGATTGTGTGCATGACTTAGAAAAAATTGTTCTCCTCTTTGTTTTCATTCTATTTTGTTATCTTCATAGGTCTCACTTCGTTTGTTAATCACGAGCGGTCGGTCTTAAGTGTTAATCTTTA

Coding sequence (CDS)

ATGTTCAAAGTTGGGAGCCTTGGGATAGCTCTTATTATGATTCTAATGGCAATCCCCAACTTTGCTATTTTTGCCGAAAGTAGAATGCTCCGATCAGAAGCCGAGGGTGACGGTGTTAAGGAACATGATGTAGATGAAAAGCCAAAGAGACTAATACCACAGCCGAAAGATTCGAGCAGTAGTGGCAATCGAGTTGTTACGTTGGCTTCAGGACCAAGCAGGAAGGGTGGCGGCCATTAG

Protein sequence

MFKVGSLGIALIMILMAIPNFAIFAESRMLRSEAEGDGVKEHDVDEKPKRLIPQPKDSSSSGNRVVTLASGPSRKGGGH

Homology

[Close]

BLAST of MELO3C024718 vs. NCBI nr
Match: TYK01636.1 (uncharacterized protein E5676_scaffold38G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 151.0 bits (380), Expect = 4.4e-33
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 1  MFKVGSLGIALIMILMAIPNFAIFAESRMLRSEAEGDGVKEHDVDEKPKRLIPQPKDSSS 60
          MFKVGSLGIALIMILMAIPNFAIFAESRMLRSEAEGDGVKEHDVDEKPKRLIPQPKDSSS
Sbjct: 1  MFKVGSLGIALIMILMAIPNFAIFAESRMLRSEAEGDGVKEHDVDEKPKRLIPQPKDSSS 60

Query: 61 SGNRVVTLASGPSRKGGGH 80
          SGNRVVTLASGPSRKGGGH
Sbjct: 61 SGNRVVTLASGPSRKGGGH 79

[Close]

BLAST of MELO3C024718 vs. NCBI nr
Match: KAA0043050.1 (uncharacterized protein E6C27_scaffold75G001340 [Cucumis melo var. makuwa])

HSP 1 Score: 147.9 bits (372), Expect = 3.7e-32
Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 1  MFKVGSLGIALIMILMAIPNFAIFAESRMLRSEAEGDGVKEHDVDEKPKRLIPQPKDSSS 60
          MFKV SLGIALIMILMAIPNFAIFAESRMLRSEAEGDGVKEHDVDEKPKRLIPQPKDSSS
Sbjct: 1  MFKVRSLGIALIMILMAIPNFAIFAESRMLRSEAEGDGVKEHDVDEKPKRLIPQPKDSSS 60

Query: 61 SGNRVVTLASGPSRKGGGH 80
          SGNRVVTLASGPSRKGGGH
Sbjct: 61 SGNRVVTLASGPSRKGGGH 79

[Close]

BLAST of MELO3C024718 vs. NCBI nr
Match: KAE8652345.1 (hypothetical protein Csa_022541, partial [Cucumis sativus])

HSP 1 Score: 124.8 bits (312), Expect = 3.3e-25
Identity = 69/80 (86.25%), Postives = 71/80 (88.75%), Query Frame = 0


Query: 1   MFKVGSLGIALIMILMAIPNFAIFAESRMLRSEAEGDGVKEHDVD-EKPKRLIPQPKDSS 60
           MFK+ S GIALIMILMAIPNFAIFA SRMLRSEAE   VKEHDVD EKPKRL PQPKDSS
Sbjct: 21  MFKLRSFGIALIMILMAIPNFAIFANSRMLRSEAERGSVKEHDVDQEKPKRLTPQPKDSS 80

Query: 61  SSGNRVVTLASGPSRKGGGH 80
           SSG+RV TLASGPSRKGGGH
Sbjct: 81  SSGDRVFTLASGPSRKGGGH 100

[Close]

BLAST of MELO3C024718 vs. ExPASy TrEMBL
Match: A0A5D3BTU1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold38G00040 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.1e-33
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 1  MFKVGSLGIALIMILMAIPNFAIFAESRMLRSEAEGDGVKEHDVDEKPKRLIPQPKDSSS 60
          MFKVGSLGIALIMILMAIPNFAIFAESRMLRSEAEGDGVKEHDVDEKPKRLIPQPKDSSS
Sbjct: 1  MFKVGSLGIALIMILMAIPNFAIFAESRMLRSEAEGDGVKEHDVDEKPKRLIPQPKDSSS 60

Query: 61 SGNRVVTLASGPSRKGGGH 80
          SGNRVVTLASGPSRKGGGH
Sbjct: 61 SGNRVVTLASGPSRKGGGH 79

[Close]

BLAST of MELO3C024718 vs. ExPASy TrEMBL
Match: A0A5A7TI98 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G001340 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.8e-32
Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 1  MFKVGSLGIALIMILMAIPNFAIFAESRMLRSEAEGDGVKEHDVDEKPKRLIPQPKDSSS 60
          MFKV SLGIALIMILMAIPNFAIFAESRMLRSEAEGDGVKEHDVDEKPKRLIPQPKDSSS
Sbjct: 1  MFKVRSLGIALIMILMAIPNFAIFAESRMLRSEAEGDGVKEHDVDEKPKRLIPQPKDSSS 60

Query: 61 SGNRVVTLASGPSRKGGGH 80
          SGNRVVTLASGPSRKGGGH
Sbjct: 61 SGNRVVTLASGPSRKGGGH 79

The following BLAST results are available for this feature:

BLAST of MELO3C024718 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK01636.1	4.4e-33	100.00	uncharacterized protein E5676_scaffold38G00040 [Cucumis melo var. makuwa]	[more]
KAA0043050.1	3.7e-32	98.73	uncharacterized protein E6C27_scaffold75G001340 [Cucumis melo var. makuwa]	[more]
KAE8652345.1	3.3e-25	86.25	hypothetical protein Csa_022541, partial [Cucumis sativus]	[more]

BLAST of MELO3C024718 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C024718 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BTU1	2.1e-33	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TI98	1.8e-32	98.73	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MELO3C024718 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C024718.1	MELO3C024718.1	mRNA