MELO3C024627 (gene) Melon (DHL92) v4

Overview
NameMELO3C024627
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionDynein light chain
Locationchr02: 19984717 .. 19990972 (+)
RNA-Seq ExpressionMELO3C024627
SyntenyMELO3C024627
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGGAGGAGTCACTGTAGAAATAGAGAAAGACAAGAGAGTTTTTGTTTGCTTTGCTTTACCCTTTTCGCCTATATAATTATAATATATAATTCCATCTCTGTTTCCATTCCGATTTGGCAGCCACCACAGATTTTCCATTCCCTGTTTTAGTTTCTCCACTTATATAATTAATAATAATAATAATAATCATCATCATCATCATCATCATCATCTTGAATCCGATCGAGAAGAAAGATGTTGGAAGGGAAGGCCACCGTGAAAGAAACCGACATGTCGGAAAAAATGCAGATGCACGCCATGGCCTCTGCTTCTCACGCCCTCGATCTCTTCGACGTCTCCGATTTCCTCTCCCTTGCTTCCTATATCAAGAAGGTACGTTACGTTGGTTGTTACAATTACAATTCATTTTAATTTTTCATCAATATTTTTCAATTCAAATTAGGATTTTGATGGTACTTATGGAAGTGGTTGGCAATGCGTGGTGGGTTCTAATTTCGGCTGCTTCTTCACTCATTCTATGGGCACTTTCATTTATTTTTCCCTTGAAACTCTCAATTTTCTCATCTTTAAATCCCCTTCCTAATTCATATCTTTAGGGCTGCTCTCCTCTCTTTCGCCCCCCCTCTCTATCCCTAAAATTTACATGGAACGACGAGCAACAACAAACCCACCGTACGTTGCGTATGTATTATTATTGTCACATGTGATCCGTCTTTTAATTTCTCCTTCTGCTATGTATGTTTTTTAATAATTCATTTTTCTCTTTTACTTTCTTCATTTTTCATCATATGAACACATCTATATTATCTTTTATTCTTATTATTATTGCAATTCATATGAGGTTTCCAAAACTAGTTTTTGCCTTTTCTTCTCAAATGTATCATTTTAGAAAGTTTATTCTAGAGTTTGACAACGTCCAACAATGAAGTTGGACTTGGAATATTTCTAAATAAATATATAATAATTACTAATTTGAACTTGGAATACCCTTCATAACAATGTCCTCTCCAATTTAGATTCATACTCGTACCCTTTTGATTTACACAAAAGAAAAAAAATGGTGAATATGTGATGTAATAGCAATTATAATTATTAACTCAATTTCATTCAAATTTGTTTTTAAAAAGTATTTGGACAAAATAAACTATTTATACATATGGAAATAAAAACTTATTACATTTTTAGGTTTGATCCTTTTATGAAAGGTAAATATTTGGTTATTTTTTAGAATCTTTAATTAGTAATACAAATAGGATTTTACTTATATTTCTTATTATAATAAATTTAAGAAAAAAGCCTACGGGTCCCCTCCCCGTCCCCATTTAATTCTCGAAGAATTTTTTTGCTTCCCCTTCTCTCATCTCCTGCCTAGATGTCTCTACCTTGATCTCCATCCCAACTGGGAAAGTAACATCCCTACAAATAAACCAACTTATATTTGTTTTAAAAATAAATAATCACAACAAAATCATGAATGTTCAAAAATATAAGTAATATATCGTAAATGAAAAAATTTATAAAATATAACCAAATTTCAGATTTTATCAATATAGATATTAGTGGATAATAGACTTCTATCAGTTTCTATTAATAACATCAATAAATATTAATATAAGTCTATTGGTATGTGTCTCATTGATATGATCTAAAAATTTTCTACATTTTATAATTTTTTTGAATCGTTTGTTTATATTTATAAATTATGAAAAGACGTGTAAATCAATTTTAACGAGATTAGTTTACTTAGAAAACTAAAGAAGCAAAGAAGACCTTCAAGTTAAACATCAAAGTAAAAGGTAATAATTTTAGTTAAAGAAAAAGTAAGTAAAGATTGTAATTTTTTTTTTAAAAGGTAAATATAATAATAAATGAGCATAACAAAGAAAATAGTTCAAAGAAATATGAAGAAGAAAAGAATCTTAGTTAAAGGTTTCATTATGCATCTTGACTCAACTAATTTTCGAATTTGTCACACTTATGGAATAATTCTATCTTTTCCTTTTAATCTACTCTTTACGTTGAAAATCTATTTTACAATTTACAATTCAAAAAGAAAATTTTATAAATTAACTTATTAACTCTACTCAATTAGCTAAAGGGGTATTCACAAAATAAAATAAAAAAAGCAAAACAAGTTATAATAATTAAGTCCATAATACACAAATTTATTGTTTGCAAAAATAACAAAAACAAAGCCTAGCTCACATATATAATTAAAATGTAAAATATCACAAATATAATGCTCTCATTACTGATATACATTTGAAACACTTGATAATACACCTAATATACCTAATATTTCTTGATACCCTTGACATATATTTGACACTTCTTGATAACCTTTAGACCTTGATACACTTGATGCATCATGAAACTCTTTGATACCCTTAATACTCTTTGATACACTTGGAACACATTGATACACTTAAAGGCTTCATTGATTCTTCTTAATACACTTGATATCCTTTATGTCTCGATACATGTAAAGGCTTCATTGATTAGTTCGATCCACTTCATACATTGCTAATAAACTTGTTATGCTTCATTGGTACACTAAAAAAAATTGATACACTTGATACACGTGGTATATTTGATACATCTGAAGTACTACATATACATGTACTATGATTCACTGATAGAGTTGATATACTTGAAGTTCTACTTATACACTTGATACACTATTGATATACACTTGTAAACTTGATTGATATACTTGATAATGATTCACTTTACTAATATGTTGATATGCTTTAATAATATATTGTTGATATACTTGATAATGTTACACAGAGTTATATCATTCCTATACTTAATAAAAATTGGAAAAATAAAAATTACGTAATAAGTAGATAAACCAACTAATGCATACAATATAAGTATATCACAACATTGATATACAAAACTAATACAAAGTAAAACCAAAATAAAACCAACGTAAAAAAAAAAATAAAACAAATCATATGAAATCAAATTCAACTAAAAATACACATCGAAGAAAGTAGAAAAAAACCACAAACGAAGTTAAATTACTATGATCAACGACCATTATATTTCATATTGCAATTAATATTTTAAAATAAAGATTAAGACAGAGAACAAATTGTTTTTCTCATATAAAAAAGGATGATTAGAGCCTTAAAAAATAGAAGAAGAAGAAATAAGAGAGGATTAAAACATTAAAAAGGAAAAAGAAATAAATTATTGAAAGATAATTGAAAAATAATAATAAATTTAAAATGTAAAATATTTTAAAAAACGAAAATTTTGTCATATTTATAAAATTTTGAAACAATGTATTATATTTACAATATCATATTCTTAAGGTCACTACCGCAATTTCCCAAAGCTAAAGCATCCTATTAACTCTAGATGATGAAGTAGACGATGACTCAAAAGAACAAAGGATAACACTTTTAATTTTTCTTTTTGGAGGGCCACAAGAACAAAGGTCGCCTTCTCTGGCGTGTGGGATGGGAAATAGGGAATCATTGTTATTCTGCATAAACGTCACAAATCGTTGGGTCAGTTTGAGTATGTGAACTTTTTGTATTTTTGCAATCTCAAATCAATCATTTCAATTTGCATTATTGAACCCTTCAATTTTATTTTCCCAAAAAAAATGATCACAAATGCTATCAAACTTCCACACCCTTCATTCGACTAATTTGAAAAGTCTTTCAGTGCTTAACATCTCTTTTTCAACTTCTTTTACAACACTTCTGGGTATTAAAATTGACTATTATAATTCACTAACGAATCTTAAACTTACTACAGTATAATTATTCGAAAATTTTCATTGTCTATTATTTCAACCATTCTCTTATATGTAACTCTAACTGAAATAGTATGTCTCAAATAGAAATTATTATTACAAAGAGTAAAGTAGTTTGTTTCTGAAATAGACTTTTGTCTAGTGATTCCGTTGGCAAAATAAAAGCAGCACCTTTTTTGGCGTGTCACGTCAACTCTTTTCTCAAATATGCATTGGAATAAAGATTTTAGGTGTAGTAATTGAAAGTTTTTTTTCCTCTGGTATATACAATACAGAAGATACAATTTTCTGATGTTATGTAAAGGACTCTTCAATTAGTCCACTCAAAATCATCATTTCTATATCATTTACCACTTCCTCACTTTCACTTCTTGAAAATCCATTCTTCCAACCAATATCCCACATTCCATTCATCACTTCTTTGCACCAAAGGTCTCTACTCAACACTGCATATAGAGTATCTACAATAAGATTATCGCCACAAATTGTTTGGTAACTTGTTAGAGTGTCGATGTCGTCGTTCACTTCTTCAACAAGTTTTTCTATAGAAATCTCTATCTTTGTATTGCTCTTATCTCCTAGTAATAAAGAATTGCCTACTAGTAAGTTATGATGGCCTTTACGGTCCATGAGTTCTATTGCACAATCTACAAAAAGTTTCGTATTCAGGGATTCGGGATCATTGCAGCGAGATGCTGCCTGCAGCATTGTTCTACCATTTAGATGGAGATCATAAAGCTCCCCTGCATGACAGAGGAATGATGAACTTTTCAAAAGTAATGCTTTCAGATTGGTCCCTTGATTGCAGCTTTTGGTATGTGCTTCAGTATGACCATTGCGATCAATTTCTTCAACAGTACTTGTATTGATATCGAGTTTGGGGCTCAATGGCAAGAGAGAGTTAGGGTTCTCATTGCAGCATTCTACAAGATTTATGAGAGAACCAAGTATAAATCACAAACATTTAGACAATTCCAAGTACTTGTTCTACTTAGGAAGGCAAAGTTATTGAATTTCACTAAAAATCTCTCTTGGATGAAGATATATGAGATTCAAGTATGGGGATAGAGAATGAACGTTTCCCTTTCCCTTTAAGATGAATTGTGGTCAATAACAGTAGACATTGCAACTAATCCTATTTGTGATGGAAAATTTACCTATAATCTTTGTATCACATTCGTCCATTTCGTTCTCCATAGTAATTAAAGCCATAAGGGTAGTAGTGTTTCGATTTATCTGAAAATCAACAATTTCATTCGTAAGACAAACCATGTGAGCCTGTAAGATAAACACTGCTTCACTCTCCTTTTACAAGGGAAGAAAAAGTATACTGAAGCATAAAAGAAAAATAGTTTGATGTACCAAAAGTTAAAGGATAGGTCAGAACTCACAAATGAATTAACTTCTGAATGGGAAAGGACTGGTTCATCCTTTTTCTGACAGTCGCGATTGTTAGATATTGCTCTCACTGCTCGTTCTGGCACAGGATCTTGAATGGAGCTACGTTGTTTATGAGTTCTGTTCTTCCTTGGATTAGTGGATGTCACTTTTTCTTGATGCTGTGGTCTTGACACAACTTTTTCTTTTGAAAATTCTTTTTCCACTGGTTTAGTCAGTTTCTTTGAAGAAAGAACTTTCCTGTCAATTGGTTCTTTCTCATGGGGCATATCAGGCATTGGACTAAATATTTTCAACTTCTCTGCAGTCTTTTTCTTAGTATCAACAGTACATTCTTTTAATTTTTTTGCTTCTTTTTTTGGTTTCAGCTTTCTTCCTTCCTCAGCAATCTGTTTGACTGGACTCCCTTGCCCCTTTTGTTTCCTGTGCAATTTATCTGAACTCATAATTCCACCATGGAAATCAAAATCTCCAGCCGACTGAAGTTCTTTCTTTTTCGTACTTCTTAGCTTAGTTTTTTGGTCAAAAGCATCATTTTTTGAGGAGACATGTGCTCGGTGTTCCTCAAATTCGTCAGGTGGGAGAGGCTTGTGTTTTATCAATACAATTGGCCGTCCATCTTTCAACCTTTGTTTGGAACCATCATTGTAGGAATTTGAGCAATGAATGTTAAACTCTATATCAGAATCACTCTCTCTAAGCTTGTTGACAGGCATTTTTTCAAGTATTTCTCTCAAGGTTCCTTTTTGATGATCCTCCTTGTTGATGACAGATTTAGACTTGGGCATATTCAAAGTTGCATTGATGCCAAAGAGAGATGTCTTGTAACCAGAGACTTTTTTAAATTCGAACTCTTTCTTTGGAGTAATTTGCATTGATCTTGATGGAATTTCTTCAAGCCCCATAAGCTTAGCTATCAAGTTATTACGTTTCAAATTCTTCTGTTGAGATGTTGTACCGTGACAACAGTTGACATTATCATCAATCAATGAAGATTGGCTGGAGCAAGTCAATGAGATTTCCGACCCCGAGTTGGAATTTATATCACGAAAACAAGATTTACGTTCACCAACTGTAACATTACG

mRNA sequence

TTGGAGGAGTCACTGTAGAAATAGAGAAAGACAAGAGAGTTTTTGTTTGCTTTGCTTTACCCTTTTCGCCTATATAATTATAATATATAATTCCATCTCTGTTTCCATTCCGATTTGGCAGCCACCACAGATTTTCCATTCCCTGTTTTAGTTTCTCCACTTATATAATTAATAATAATAATAATAATCATCATCATCATCATCATCATCATCTTGAATCCGATCGAGAAGAAAGATGTTGGAAGGGAAGGCCACCGTGAAAGAAACCGACATGTCGGAAAAAATGCAGATGCACGCCATGGCCTCTGCTTCTCACGCCCTCGATCTCTTCGACGTCTCCGATTTCCTCTCCCTTGCTTCCTATATCAAGAAGGATTTTGATGGTACTTATGGAAGTGGTTGGCAATGCGTGGTGGGTTCTAATTTCGGCTGCTTCTTCACTCATTCTATGGGCACTTTCATTTATTTTTCCCTTGAAACTCTCAATTTTCTCATCTTTAAATCCCCTTCCTAATTCATATCTTTAGGGCTGCTCTCCTCTCTTTCGCCCCCCCTCTCTATCCCTAAAATTTACATGGAACGACGAGCAACAACAAACCCACCCTTTCTTCCTTCCTCAGCAATCTGTTTGACTGGACTCCCTTGCCCCTTTTGTTTCCTGTGCAATTTATCTGAACTCATAATTCCACCATGGAAATCAAAATCTCCAGCCGACTGAAGTTCTTTCTTTTTCGTACTTCTTAGCTTAGTTTTTTGGTCAAAAGCATCATTTTTTGAGGAGACATGTGCTCGGTGTTCCTCAAATTCGTCAGGTGGGAGAGGCTTGTGTTTTATCAATACAATTGGCCGTCCATCTTTCAACCTTTGTTTGGAACCATCATTGTAGGAATTTGAGCAATGAATGTTAAACTCTATATCAGAATCACTCTCTCTAAGCTTGTTGACAGGCATTTTTTCAAGTATTTCTCTCAAGGTTCCTTTTTGATGATCCTCCTTGTTGATGACAGATTTAGACTTGGGCATATTCAAAGTTGCATTGATGCCAAAGAGAGATGTCTTGTAACCAGAGACTTTTTTAAATTCGAACTCTTTCTTTGGAGTAATTTGCATTGATCTTGATGGAATTTCTTCAAGCCCCATAAGCTTAGCTATCAAGTTATTACGTTTCAAATTCTTCTGTTGAGATGTTGTACCGTGACAACAGTTGACATTATCATCAATCAATGAAGATTGGCTGGAGCAAGTCAATGAGATTTCCGACCCCGAGTTGGAATTTATATCACGAAAACAAGATTTACGTTCACCAACTGTAACATTACG

Coding sequence (CDS)

ATGTTGGAAGGGAAGGCCACCGTGAAAGAAACCGACATGTCGGAAAAAATGCAGATGCACGCCATGGCCTCTGCTTCTCACGCCCTCGATCTCTTCGACGTCTCCGATTTCCTCTCCCTTGCTTCCTATATCAAGAAGGATTTTGATGGTACTTATGGAAGTGGTTGGCAATGCGTGGTGGGTTCTAATTTCGGCTGCTTCTTCACTCATTCTATGGGCACTTTCATTTATTTTTCCCTTGAAACTCTCAATTTTCTCATCTTTAAATCCCCTTCCTAA

Protein sequence

MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS
Homology
[Close]
BLAST of MELO3C024627 vs. NCBI nr
Match: XP_008462685.1 (PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo])

HSP 1 Score: 185.7 bits (470), Expect = 1.9e-43
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV
Sbjct: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS 93
          GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS
Sbjct: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS 92

[Close]
BLAST of MELO3C024627 vs. NCBI nr
Match: XP_004150050.1 (dynein light chain 1, cytoplasmic [Cucumis sativus] >KAE8652965.1 hypothetical protein Csa_017734 [Cucumis sativus])

HSP 1 Score: 177.6 bits (449), Expect = 5.1e-41
Identity = 89/92 (96.74%), Postives = 90/92 (97.83%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          MLEGKATVKETDMSEKMQMHAMASAS ALDLFDVSD LSLAS+IKKDFDGTYGSGWQCVV
Sbjct: 1  MLEGKATVKETDMSEKMQMHAMASASQALDLFDVSDSLSLASHIKKDFDGTYGSGWQCVV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS 93
          GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS
Sbjct: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS 92

[Close]
BLAST of MELO3C024627 vs. NCBI nr
Match: XP_038878771.1 (dynein light chain 1, cytoplasmic-like [Benincasa hispida])

HSP 1 Score: 168.3 bits (425), Expect = 3.1e-38
Identity = 84/92 (91.30%), Postives = 87/92 (94.57%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          MLEGKATVKETDMSEKMQ HAMASASHALDLFDVSD LSLA++IKKDFD  YGSGWQCVV
Sbjct: 1  MLEGKATVKETDMSEKMQSHAMASASHALDLFDVSDSLSLAAHIKKDFDRAYGSGWQCVV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS 93
          GSNFGCFFTHS G+FIYFSLETLNFLIFKSPS
Sbjct: 61 GSNFGCFFTHSKGSFIYFSLETLNFLIFKSPS 92

[Close]
BLAST of MELO3C024627 vs. NCBI nr
Match: XP_022933771.1 (dynein light chain 1, cytoplasmic-like [Cucurbita moschata] >XP_022973196.1 dynein light chain 1, cytoplasmic-like [Cucurbita maxima] >XP_023529424.1 dynein light chain 1, cytoplasmic-like [Cucurbita pepo subsp. pepo] >KAG6587968.1 hypothetical protein SDJN03_16533, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021857.1 hypothetical protein SDJN02_15585 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 161.8 bits (408), Expect = 2.9e-36
Identity = 80/92 (86.96%), Postives = 87/92 (94.57%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          MLEGKATVK+TDMSEKMQ+HA ASASHALDLFDVSD LSLA++IKK+FD +YGSGWQCVV
Sbjct: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS 93
          GSNFGCFFTHS GTFIYFSLETLNFLIFK+ S
Sbjct: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFKAAS 92

[Close]
BLAST of MELO3C024627 vs. NCBI nr
Match: XP_022144999.1 (dynein light chain 1, cytoplasmic-like [Momordica charantia])

HSP 1 Score: 154.8 bits (390), Expect = 3.5e-34
Identity = 77/91 (84.62%), Postives = 82/91 (90.11%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          MLEGK  VKETDMSEKMQ+HAMASASHALDLFDVSD LSLA++IKK+FD TYG GWQCVV
Sbjct: 1  MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSP 92
          GSNFG FFTHS  TFIYF+LETLNFLIFK P
Sbjct: 61 GSNFGSFFTHSTATFIYFALETLNFLIFKPP 91

[Close]
BLAST of MELO3C024627 vs. ExPASy Swiss-Prot
Match: Q24117 (Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=ctp PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.2e-13
Identity = 40/90 (44.44%), Postives = 56/90 (62.22%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          M + KA +K  DMSE+MQ  A+  A+ AL+ +++     +A+YIKK+FD  Y   W C+V
Sbjct: 1  MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEK--DIAAYIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKS 91
          G NFG + TH    FIYF L  +  L+FKS
Sbjct: 61 GRNFGSYVTHETRHFIYFYLGQVAILLFKS 88

[Close]
BLAST of MELO3C024627 vs. ExPASy Swiss-Prot
Match: Q94748 (Probable dynein light chain OS=Schistosoma mansoni OX=6183 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.2e-13
Identity = 41/90 (45.56%), Postives = 56/90 (62.22%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          M E KA +K  DM E MQ  A+ +A+ ALD +++     +A+YIKK+FD  Y   W C+V
Sbjct: 1  MGERKAVIKNADMHEDMQETAVHTAAAALDKYEIEK--DVAAYIKKEFDRKYNPNWHCIV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKS 91
          G +FG + TH    FIYF L+   FL+FKS
Sbjct: 61 GKHFGSYVTHETQHFIYFYLQERAFLLFKS 88

[Close]
BLAST of MELO3C024627 vs. ExPASy Swiss-Prot
Match: Q9UR05 (Dynein light chain 1, cytoplasmic OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dlc2 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.6e-13
Identity = 39/85 (45.88%), Postives = 54/85 (63.53%), Query Frame = 0 

Query: 6  ATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFG 65
          A +K  DMSEKMQ  A+ +A  A++ F +     +A++IK++FD  +   W C+VG NFG
Sbjct: 2  AVIKAVDMSEKMQQEAIHAAVQAMEKFTIEK--DIAAFIKREFDKKFSPTWHCIVGRNFG 61

Query: 66 CFFTHSMGTFIYFSLETLNFLIFKS 91
           F TH    FIYF L T+ FL+FKS
Sbjct: 62 SFVTHESRHFIYFYLGTVAFLLFKS 84

[Close]
BLAST of MELO3C024627 vs. ExPASy Swiss-Prot
Match: Q22799 (Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.1e-13
Identity = 39/90 (43.33%), Postives = 56/90 (62.22%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          M++ KA +K  DMS+ MQ  A+  A+ AL+ +++     +A+YIKK+FD  Y   W C+V
Sbjct: 1  MVDRKAVIKNADMSDDMQQDAIDCATQALEKYNIEK--DIAAYIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKS 91
          G NFG + TH    FIYF L  +  L+FKS
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFKS 88

[Close]
BLAST of MELO3C024627 vs. ExPASy Swiss-Prot
Match: O02414 (Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=1043166 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.1e-13
Identity = 41/90 (45.56%), Postives = 54/90 (60.00%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          M E KA +K  DM E MQ  A+  A+ AL+ F++     +A+YIKK+FD  Y   W C+V
Sbjct: 1  MSERKAVIKNADMPEDMQQDAVDCATQALEKFNIEK--DIAAYIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKS 91
          G NFG + TH    FIYF L  +  L+FKS
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAVLLFKS 88

[Close]
BLAST of MELO3C024627 vs. ExPASy TrEMBL
Match: A0A1S3CJ38 (Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103500988 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 9.0e-44
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV
Sbjct: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS 93
          GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS
Sbjct: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS 92

[Close]
BLAST of MELO3C024627 vs. ExPASy TrEMBL
Match: A0A6J1I806 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111471695 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.4e-36
Identity = 80/92 (86.96%), Postives = 87/92 (94.57%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          MLEGKATVK+TDMSEKMQ+HA ASASHALDLFDVSD LSLA++IKK+FD +YGSGWQCVV
Sbjct: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS 93
          GSNFGCFFTHS GTFIYFSLETLNFLIFK+ S
Sbjct: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFKAAS 92

[Close]
BLAST of MELO3C024627 vs. ExPASy TrEMBL
Match: A0A6J1EZZ1 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111441083 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.4e-36
Identity = 80/92 (86.96%), Postives = 87/92 (94.57%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          MLEGKATVK+TDMSEKMQ+HA ASASHALDLFDVSD LSLA++IKK+FD +YGSGWQCVV
Sbjct: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS 93
          GSNFGCFFTHS GTFIYFSLETLNFLIFK+ S
Sbjct: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFKAAS 92

[Close]
BLAST of MELO3C024627 vs. ExPASy TrEMBL
Match: A0A6J1CTX2 (Dynein light chain OS=Momordica charantia OX=3673 GN=LOC111014529 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.7e-34
Identity = 77/91 (84.62%), Postives = 82/91 (90.11%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          MLEGK  VKETDMSEKMQ+HAMASASHALDLFDVSD LSLA++IKK+FD TYG GWQCVV
Sbjct: 1  MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSP 92
          GSNFG FFTHS  TFIYF+LETLNFLIFK P
Sbjct: 61 GSNFGSFFTHSTATFIYFALETLNFLIFKPP 91

[Close]
BLAST of MELO3C024627 vs. ExPASy TrEMBL
Match: A0A1S3UQ79 (Dynein light chain OS=Vigna radiata var. radiata OX=3916 GN=LOC106767782 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 6.5e-34
Identity = 73/92 (79.35%), Postives = 84/92 (91.30%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          MLEGKA VKETDMS KMQ+HAMA+ASHALDL+DVSD +S+A++IKK+FD  YG+GWQCVV
Sbjct: 1  MLEGKALVKETDMSPKMQIHAMAAASHALDLYDVSDCISVAAHIKKEFDSVYGNGWQCVV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS 93
          GSNFGC+FTHS GTFIYF+LETLNFLIFK  S
Sbjct: 61 GSNFGCYFTHSSGTFIYFALETLNFLIFKGSS 92

[Close]
BLAST of MELO3C024627 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 136.3 bits (342), Expect = 1.2e-32
Identity = 69/92 (75.00%), Postives = 75/92 (81.52%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          MLEGKA V+++DM  KMQM AMA AS ALDLFDV D  S+A +IKK+FD  YGSGWQCVV
Sbjct: 1  MLEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS 93
          GSNFGCFFTHS GTFIYF LETL FLIFK  S
Sbjct: 61 GSNFGCFFTHSKGTFIYFQLETLKFLIFKGAS 92

[Close]
BLAST of MELO3C024627 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 134.4 bits (337), Expect = 4.6e-32
Identity = 67/89 (75.28%), Postives = 75/89 (84.27%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          MLEGKA V+ETDM  KMQM AM  AS +LDLFDV D +S+A++IKK+FD  YGSGWQCVV
Sbjct: 1  MLEGKAKVEETDMPVKMQMQAMKIASQSLDLFDVFDSISIAAHIKKEFDERYGSGWQCVV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFK 90
          G+NFGCFFTHS GTFIYF L TLNFLIFK
Sbjct: 61 GTNFGCFFTHSKGTFIYFHLGTLNFLIFK 89

[Close]
BLAST of MELO3C024627 vs. TAIR 10
Match: AT4G27360.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 100.1 bits (248), Expect = 9.6e-22
Identity = 48/89 (53.93%), Postives = 67/89 (75.28%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          MLEGKA + +TDM + M+  A++ AS ALD FDV++   +A +IKK+FD +YGSGWQC+V
Sbjct: 1  MLEGKAVMGDTDMKQTMKEDALSLASKALDCFDVTEPTQIARFIKKEFDRSYGSGWQCIV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFK 90
          G++FG F TH  G FI+FS+ +L  L+FK
Sbjct: 61 GTHFGSFVTHCSGCFIHFSVGSLTILLFK 89

[Close]
BLAST of MELO3C024627 vs. TAIR 10
Match: AT1G52240.1 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 81.3 bits (199), Expect = 4.6e-16
Identity = 41/59 (69.49%), Postives = 47/59 (79.66%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCV 60
          MLEGKA V+++DM  KMQM AMA AS ALDLFDV D  S+A +IKK+FD  YGSGWQCV
Sbjct: 1  MLEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCV 59

[Close]
BLAST of MELO3C024627 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 71.6 bits (174), Expect = 3.6e-13
Identity = 37/79 (46.84%), Postives = 47/79 (59.49%), Query Frame = 0 

Query: 12  DMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHS 71
           DM   MQ HA   A   LD  +      +A  +KK+FD  YG  W C+VGS+FG F THS
Sbjct: 123 DMPGFMQAHAFRCARMTLDSLEKFSSKHMAFNLKKEFDKGYGPAWHCIVGSSFGSFVTHS 182

Query: 72  MGTFIYFSLETLNFLIFKS 91
            G FIYFS++ L  L+FK+
Sbjct: 183 TGCFIYFSMDKLYVLLFKT 201

The following BLAST results are available for this feature:
BLAST of MELO3C024627 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008462685.11.9e-43100.00PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo][more]
XP_004150050.15.1e-4196.74dynein light chain 1, cytoplasmic [Cucumis sativus] >KAE8652965.1 hypothetical p... [more]
XP_038878771.13.1e-3891.30dynein light chain 1, cytoplasmic-like [Benincasa hispida][more]
XP_022933771.12.9e-3686.96dynein light chain 1, cytoplasmic-like [Cucurbita moschata] >XP_022973196.1 dyne... [more]
XP_022144999.13.5e-3484.62dynein light chain 1, cytoplasmic-like [Momordica charantia][more]
BLAST of MELO3C024627 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q241171.2e-1344.44Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=ctp PE=1... [more]
Q947481.2e-1345.56Probable dynein light chain OS=Schistosoma mansoni OX=6183 PE=3 SV=1[more]
Q9UR051.6e-1345.88Dynein light chain 1, cytoplasmic OS=Schizosaccharomyces pombe (strain 972 / ATC... [more]
Q227992.1e-1343.33Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=... [more]
O024142.1e-1345.56Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=10431... [more]
BLAST of MELO3C024627 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CJ389.0e-44100.00Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103500988 PE=3 SV=1[more]
A0A6J1I8061.4e-3686.96Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111471695 PE=3 SV=1[more]
A0A6J1EZZ11.4e-3686.96Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111441083 PE=3 SV=1[more]
A0A6J1CTX21.7e-3484.62Dynein light chain OS=Momordica charantia OX=3673 GN=LOC111014529 PE=3 SV=1[more]
A0A1S3UQ796.5e-3479.35Dynein light chain OS=Vigna radiata var. radiata OX=3916 GN=LOC106767782 PE=3 SV... [more]
BLAST of MELO3C024627 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G52240.21.2e-3275.00RHO guanyl-nucleotide exchange factor 11 [more]
AT3G16120.14.6e-3275.28Dynein light chain type 1 family protein [more]
AT4G27360.19.6e-2253.93Dynein light chain type 1 family protein [more]
AT1G52240.14.6e-1669.49RHO guanyl-nucleotide exchange factor 11 [more]
AT5G20110.13.6e-1346.84Dynein light chain type 1 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001372Dynein light chain, type 1/2SMARTSM01375Dynein_light_2coord: 1..90
e-value: 9.5E-42
score: 154.7
IPR001372Dynein light chain, type 1/2PFAMPF01221Dynein_lightcoord: 5..90
e-value: 7.8E-31
score: 106.3
IPR001372Dynein light chain, type 1/2PANTHERPTHR11886DYNEIN LIGHT CHAINcoord: 1..92
IPR037177Dynein light chain superfamilyGENE3D3.30.740.10Protein Inhibitor Of Neuronal Nitric Oxide Synthase;coord: 2..90
e-value: 6.0E-31
score: 108.3
IPR037177Dynein light chain superfamilySUPERFAMILY54648DLCcoord: 1..91
NoneNo IPR availablePANTHERPTHR11886:SF71DYNEIN LIGHT CHAINcoord: 1..92

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C024627.1MELO3C024627.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007017 microtubule-based process
cellular_component GO:0030286 dynein complex