Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAACAGTGAAGATGATAGTGGTAAGAAGACTAACATACATTCTGATGATAGTTCATGCAAGCGAAGCTCAACAACTGGCCATAACATGAAAGCCCCCCACCGGAAAACCTTCGAAAATGGGGAAACAATTATTATTAGAAGAAGACTCTTTCATGACGATTGGAGTTGTATAATGTTCACTTTGAAGAAACAAACTGAAATAGAATTCTCCTACGAGCCGTTCCACGCAAATAAGGCCATCCTCACTCCCTTTGAGGATAATGCAAACTTGCTATGCTCAAACAAAAGTATAAATGGATGGACTACAGTGGGTAACTCTCAAGTCAAATTTGAGCGCTGGGATACTAAAAAACATGCCTGCCAAACTCTTATTCCAAGCTATGGAGGATGGGTTCGTTTCAGAGGAGTTCCGCTCCATCTTTGGAATTATGAGTCCTTTGTCAATATTGGAAAGGCTTGTGGAGGTTTTTTGGCTGTGGCAAAAGAAACAATGGAAAAGGAGTCTCTTGTCGAAGCAAAAATCAAGGTTAGATACAACTACACTGGTTTCGTACCAGCCTCAATCCTGCTTACTGATGACCAAGGGGAAAACTTTGTGGTTAACAGAGCCCCCCTCCAAATGAGAGATGGTTCATAGAAAGGAATGTTAACTTCCATGGAAGCTTCAAGATTGAAGTAGCTGATGATTTCGACAGCTTGAACCCCAATGCAGAGGAGTTTACCTTTGCCGAAATCGATGTCATTCTGCTGGAAAATTCAAAAAATCAAGCCGACAACAAACAATCAAAGCTTGACAAAAATTCTAACTCAAATCCCACTCATGCCAAGAAAAACAGCTCGTCAAATTCTGAGTATGATCCTTTTGATCAAAGCTCGGATGATTGAAGGAAGGAGAAAGGAAAGGCCATCTTGTCAACTGATGATCAAGATATTTGCAATTACTCAACCAAATCAAAAAAGTTAGTAAAGAGTAAAGTCTCATCTAAGTCACCTGGCGGCTAATAAAGAAAGATGATTTTGCGGCTAATAAAAAAATTTATCAATAAAAAAAGTCAGCCCTTATAAATACTACCAAAAGAAATATTATAGAGTTGAAAGGAAATCTGGCTCTGAATGTGAAGATCAACAACATTCTCTGGCCAACAAGGATCTCAACTTGACAGTTGATCTTGGACATCTTCCTCCATTAAGAGACCTGGACGCAACTGAAGATGTTTTAGCACAAGTTGAAAATGCTCGTGAACCTGTACAAAGCAAATCAATAGAGAATTCAGCCCTTGGTCAGGAAACAGAATTACAGCAGGAAAAAATGGATGAAGATCAAGAAGCTCTACAAATCATTTCAGATGAGGAGAGGCACAACAAATTCTATTTAAAGGAGAAAGCACTACAAGAAATATCAGTTACGATAGCATAA
mRNA sequence
ATGGACAACAGTGAAGATGATAGTGGTAAGAAGACTAACATACATTCTGATGATAGTTCATGCAAGCGAAGCTCAACAACTGGCCATAACATGAAAGCCCCCCACCGGAAAACCTTCGAAAATGGGGAAACAATTATTATTAGAAGAAGACTCTTTCATGACGATTGGAGTTGTATAATGTTCACTTTGAAGAAACAAACTGAAATAGAATTCTCCTACGAGCCGTTCCACGCAAATAAGGCCATCCTCACTCCCTTTGAGGATAATGCAAACTTGCTATGCTCAAACAAAAGTATAAATGGATGGACTACAGTGGGTAACTCTCAAGTCAAATTTGAGCGCTGGGATACTAAAAAACATGCCTGCCAAACTCTTATTCCAAGCTATGGAGGATGGGTTCGTTTCAGAGGAGTTCCGCTCCATCTTTGGAATTATGAGTCCTTTGTCAATATTGGAAAGGCTTGTGGAGGTTTTTTGGCTGTGGCAAAAGAAACAATGGAAAAGGAGTCTCTTGTCGAAGCAAAAATCAAGAGCCCCCCTCCAAATGAGAGATGGTTCATAGAAAGGAATGTTAACTTCCATGGAAGCTTCAAGATTGAAGTAGCTGATGATTTCGACAGCTTGAACCCCAATGCAGAGGAGTTTACCTTTGCCGAAATCGATGTCATTCTGCTGGAAAATTCAAAAAATCAAGCCGACAACAAACAATCAAAGCTTGACAAAAATTCTAACTCAAATCCCACTCATGCCAAGAAAAACAGCTCGTCAAATTCTGAAGTTGAAAGGAAATCTGGCTCTGAATGTGAAGATCAACAACATTCTCTGGCCAACAAGGATCTCAACTTGACAGTTGATCTTGGACATCTTCCTCCATTAAGAGACCTGGACGCAACTGAAGATGTTTTAGCACAAGTTGAAAATGCTCGTGAACCTGTACAAAGCAAATCAATAGAGAATTCAGCCCTTGGTCAGGAAACAGAATTACAGCAGGAAAAAATGGATGAAGATCAAGAAGCTCTACAAATCATTTCAGATGAGGAGAGGCACAACAAATTCTATTTAAAGGAGAAAGCACTACAAGAAATATCAGTTACGATAGCATAA
Coding sequence (CDS)
ATGGACAACAGTGAAGATGATAGTGGTAAGAAGACTAACATACATTCTGATGATAGTTCATGCAAGCGAAGCTCAACAACTGGCCATAACATGAAAGCCCCCCACCGGAAAACCTTCGAAAATGGGGAAACAATTATTATTAGAAGAAGACTCTTTCATGACGATTGGAGTTGTATAATGTTCACTTTGAAGAAACAAACTGAAATAGAATTCTCCTACGAGCCGTTCCACGCAAATAAGGCCATCCTCACTCCCTTTGAGGATAATGCAAACTTGCTATGCTCAAACAAAAGTATAAATGGATGGACTACAGTGGGTAACTCTCAAGTCAAATTTGAGCGCTGGGATACTAAAAAACATGCCTGCCAAACTCTTATTCCAAGCTATGGAGGATGGGTTCGTTTCAGAGGAGTTCCGCTCCATCTTTGGAATTATGAGTCCTTTGTCAATATTGGAAAGGCTTGTGGAGGTTTTTTGGCTGTGGCAAAAGAAACAATGGAAAAGGAGTCTCTTGTCGAAGCAAAAATCAAGAGCCCCCCTCCAAATGAGAGATGGTTCATAGAAAGGAATGTTAACTTCCATGGAAGCTTCAAGATTGAAGTAGCTGATGATTTCGACAGCTTGAACCCCAATGCAGAGGAGTTTACCTTTGCCGAAATCGATGTCATTCTGCTGGAAAATTCAAAAAATCAAGCCGACAACAAACAATCAAAGCTTGACAAAAATTCTAACTCAAATCCCACTCATGCCAAGAAAAACAGCTCGTCAAATTCTGAAGTTGAAAGGAAATCTGGCTCTGAATGTGAAGATCAACAACATTCTCTGGCCAACAAGGATCTCAACTTGACAGTTGATCTTGGACATCTTCCTCCATTAAGAGACCTGGACGCAACTGAAGATGTTTTAGCACAAGTTGAAAATGCTCGTGAACCTGTACAAAGCAAATCAATAGAGAATTCAGCCCTTGGTCAGGAAACAGAATTACAGCAGGAAAAAATGGATGAAGATCAAGAAGCTCTACAAATCATTTCAGATGAGGAGAGGCACAACAAATTCTATTTAAAGGAGAAAGCACTACAAGAAATATCAGTTACGATAGCATAA
Protein sequence
MDNSEDDSGKKTNIHSDDSSCKRSSTTGHNMKAPHRKTFENGETIIIRRRLFHDDWSCIMFTLKKQTEIEFSYEPFHANKAILTPFEDNANLLCSNKSINGWTTVGNSQVKFERWDTKKHACQTLIPSYGGWVRFRGVPLHLWNYESFVNIGKACGGFLAVAKETMEKESLVEAKIKSPPPNERWFIERNVNFHGSFKIEVADDFDSLNPNAEEFTFAEIDVILLENSKNQADNKQSKLDKNSNSNPTHAKKNSSSNSEVERKSGSECEDQQHSLANKDLNLTVDLGHLPPLRDLDATEDVLAQVENAREPVQSKSIENSALGQETELQQEKMDEDQEALQIISDEERHNKFYLKEKALQEISVTIA
Homology
BLAST of MELO3C024617 vs. NCBI nr
Match:
KAA0040719.1 (hypothetical protein E6C27_scaffold529G00420 [Cucumis melo var. makuwa] >TYK15347.1 hypothetical protein E5676_scaffold189G00100 [Cucumis melo var. makuwa])
HSP 1 Score: 726.5 bits (1874), Expect = 1.2e-205
Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 0
Query: 1 MDNSEDDSGKKTNIHSDDSSCKRSSTTGHNMKAPHRKTFENGETIIIRRRLFHDDWSCIM 60
MDNSEDDSGKKTNIHSDDSSCKRSSTTGHNMKAPHRKTFENGETIIIRRRLFHDDWSCIM
Sbjct: 1 MDNSEDDSGKKTNIHSDDSSCKRSSTTGHNMKAPHRKTFENGETIIIRRRLFHDDWSCIM 60
Query: 61 FTLKKQTEIEFSYEPFHANKAILTPFEDNANLLCSNKSINGWTTVGNSQVKFERWDTKKH 120
FTLKKQTEIEFSYEPFHANKAILTPFEDNANLLCSNKSINGWTTVGNSQVKFERWDTKKH
Sbjct: 61 FTLKKQTEIEFSYEPFHANKAILTPFEDNANLLCSNKSINGWTTVGNSQVKFERWDTKKH 120
Query: 121 ACQTLIPSYGGWVRFRGVPLHLWNYESFVNIGKACGGFLAVAKETMEKESLVEAKIKSPP 180
ACQTLIPSYGGWVRFRGVPLHLWNYESFVNIGKACGGFLAVAKETMEKESLVEAKIKSPP
Sbjct: 121 ACQTLIPSYGGWVRFRGVPLHLWNYESFVNIGKACGGFLAVAKETMEKESLVEAKIKSPP 180
Query: 181 PNERWFIERNVNFHGSFKIEVADDFDSLNPNAEEFTFAEIDVILLENSKNQADNKQSKLD 240
PNERWFIERNVNFHGSFKIEVADDFDSLNPNAEEFTFAEIDVILLENSKNQADNKQSKLD
Sbjct: 181 PNERWFIERNVNFHGSFKIEVADDFDSLNPNAEEFTFAEIDVILLENSKNQADNKQSKLD 240
Query: 241 KNSNSNPTHAKKNSSSNSEVERKSGSECEDQQHSLANKDLNLTVDLGHLPPLRDLDATED 300
KNSNSNPTHAKKNSSSNSEVERKSGSECEDQQHSLANKDLNLTVDLGHLPPLRDLDATED
Sbjct: 241 KNSNSNPTHAKKNSSSNSEVERKSGSECEDQQHSLANKDLNLTVDLGHLPPLRDLDATED 300
Query: 301 VLAQVENAREPVQSKSIENSALGQETELQQEKMDEDQEALQIISDEERHNKFYLKEKALQ 360
VLAQVENAREPVQSKSIENSALGQETELQQEKMDEDQEALQIISDEERHNKFYLKEKALQ
Sbjct: 301 VLAQVENAREPVQSKSIENSALGQETELQQEKMDEDQEALQIISDEERHNKFYLKEKALQ 360
Query: 361 EISVTIA 368
EISVTIA
Sbjct: 361 EISVTIA 367
BLAST of MELO3C024617 vs. NCBI nr
Match:
KAA0047997.1 (hypothetical protein E6C27_scaffold385G00620 [Cucumis melo var. makuwa])
HSP 1 Score: 355.1 bits (910), Expect = 7.1e-94
Identity = 211/404 (52.23%), Postives = 243/404 (60.15%), Query Frame = 0
Query: 1 MDNSEDDSGKKTNIHSDDSSCKRSSTTGHNMKAPHRKTFENGETIIIRRRLFHDDWSCIM 60
M++S+D S KK N++ DDSSCKRSST H++K P RK E GET+II RRLFHDDWS IM
Sbjct: 126 MESSDDGSDKKNNVYYDDSSCKRSSTAAHSVKDPLRKALEYGETVIITRRLFHDDWSRIM 185
Query: 61 FTLKKQTEIEFSYEPFHANKAILTPFEDNANLLCSNKSINGWTTVGNSQVKFERWDTKKH 120
FTLKKQTEIEFSYE FHANKAILT EDNANLL + Q+ ++W+T
Sbjct: 186 FTLKKQTEIEFSYESFHANKAILTLSEDNANLLFQIR----------VQMDGQQWET--- 245
Query: 121 ACQTLIPSYGGWVRFRGVPLHLWNYESFVNIGKACGGFLAVAKETMEKESLVEAKIKSPP 180
P+YGGW+RF+GVPLHLWNY+SFVNIGKACGGFLAVAKETMEKE+L+EAKIK
Sbjct: 246 ------PNYGGWMRFKGVPLHLWNYDSFVNIGKACGGFLAVAKETMEKENLIEAKIKG-- 305
Query: 181 PNERWFIERNVNFHGSFKIEVADDFDSLNPNAEEFTFAEIDVILLENSKNQADNKQSKLD 240
RWFIERNVNFHG+FKIE ADDFD+LNPNAEEFTFAE I ENSKNQ+D+KQSK D
Sbjct: 306 ---RWFIERNVNFHGTFKIEAADDFDNLNPNAEEFTFAENHAIPPENSKNQSDSKQSKPD 365
Query: 241 KNSNSNPTHAKKNSSSNSE----------------------------------------- 300
K S+SNPT+AKKNSSS SE
Sbjct: 366 KTSDSNPTYAKKNSSSESEYDPFDQNSDDRRKEKGKAILSTYDQDICNYSTKSKRSAKRK 425
Query: 301 -------------------------------------------------------VERKS 309
++RK+
Sbjct: 426 VSFKSPGGYSSHSSDFRKRQNLSINERIEQFAANKAASSSKRVSPYKYYQKKYYRIKRKA 485
BLAST of MELO3C024617 vs. NCBI nr
Match:
KAA0056838.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYJ99341.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 256.9 bits (655), Expect = 2.6e-64
Identity = 141/287 (49.13%), Postives = 180/287 (62.72%), Query Frame = 0
Query: 2 DNSEDDSGKKTNIHSDDSSCKRSSTTGHNMKAPHRKTFENGETIIIRRRLFHDDWSCIMF 61
D+SEDD+ K+ SDDSS +RSS+ G +FE +T+II RR FHDDW+ IMF
Sbjct: 142 DSSEDDNKKRYKATSDDSSSRRSSSIGFKPFTLSGNSFE--KTVIITRRCFHDDWNRIMF 201
Query: 62 TLKKQTEIEFSYEPFHANKAILTPFEDNANLLCSNKSINGWTTVGNSQVKFERWDTKKHA 121
+L+KQ+EI FSY+PF A+KAIL D+A LLCSNK NGW+TVGN QVKFE WD+ H+
Sbjct: 202 SLRKQSEIAFSYKPFQADKAILFLNSDHAKLLCSNKGANGWSTVGNYQVKFESWDSNLHS 261
Query: 122 CQTLIPSYGGWVRFRGVPLHLWNYESFVNIGKACGGFLAVAKETMEKESLVEAKIK---- 181
++IPSYGGW+RFRG+PLHLWNY +F +IG ACGGFL VAKETM+ + L++AKIK
Sbjct: 262 FHSVIPSYGGWLRFRGIPLHLWNYNTFQHIGSACGGFLDVAKETMQMDKLIDAKIKVRYN 321
Query: 182 -----------------------SPPPNERWFIERNVNFHGSFKIEVADDFDSLNPNAEE 241
P RW +ERNV HGSF+ + AD+FD N AE
Sbjct: 322 YTGFVPASILITDNQGENFIVTTVQPAEARWLVERNVRVHGSFRTKAADEFDQHNHLAET 381
Query: 242 FTFAEIDVILLENSKNQADNKQSKLDKNSNSNPTHAKKNSSSNSEVE 262
+T+ I E ++ D DK+S S T AKKN+SS SE +
Sbjct: 382 YTYNGFQAIPPEPTRTHGDYSIHNSDKHSISYHTQAKKNNSSESEYD 426
BLAST of MELO3C024617 vs. NCBI nr
Match:
TYK08190.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 256.5 bits (654), Expect = 3.4e-64
Identity = 141/287 (49.13%), Postives = 180/287 (62.72%), Query Frame = 0
Query: 2 DNSEDDSGKKTNIHSDDSSCKRSSTTGHNMKAPHRKTFENGETIIIRRRLFHDDWSCIMF 61
D+SEDD+ K+ SDDSS +RSS+ G +FE +T+II RR FHDDW+ IMF
Sbjct: 142 DSSEDDNKKRYKATSDDSSSRRSSSIGFKPFTLSGNSFE--KTVIITRRCFHDDWNRIMF 201
Query: 62 TLKKQTEIEFSYEPFHANKAILTPFEDNANLLCSNKSINGWTTVGNSQVKFERWDTKKHA 121
+L+KQ+EI FSY+PF A+KAIL D+A LLCSNK NGW+TVGN QVKFE WD+ H+
Sbjct: 202 SLRKQSEIAFSYKPFQADKAILFLNPDHAKLLCSNKGANGWSTVGNYQVKFESWDSNLHS 261
Query: 122 CQTLIPSYGGWVRFRGVPLHLWNYESFVNIGKACGGFLAVAKETMEKESLVEAKIK---- 181
++IPSYGGW+RFRG+PLHLWNY +F +IG ACGGFL VAKETM+ + L++AKIK
Sbjct: 262 FHSVIPSYGGWLRFRGIPLHLWNYNTFQHIGSACGGFLDVAKETMQMDKLIDAKIKVRYN 321
Query: 182 -----------------------SPPPNERWFIERNVNFHGSFKIEVADDFDSLNPNAEE 241
P RW +ERNV HGSF+ + AD+FD N AE
Sbjct: 322 YIGFVPASILITDNQGENFIVTTVQPAEARWLVERNVRVHGSFRTKAADEFDQHNHLAET 381
Query: 242 FTFAEIDVILLENSKNQADNKQSKLDKNSNSNPTHAKKNSSSNSEVE 262
+T+ I E ++ D DK+S S T AKKN+SS SE +
Sbjct: 382 YTYNGFQAIPPEPTRTHGDYSIHNSDKHSISYHTQAKKNNSSESEYD 426
BLAST of MELO3C024617 vs. NCBI nr
Match:
KAA0057507.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 256.5 bits (654), Expect = 3.4e-64
Identity = 141/287 (49.13%), Postives = 180/287 (62.72%), Query Frame = 0
Query: 2 DNSEDDSGKKTNIHSDDSSCKRSSTTGHNMKAPHRKTFENGETIIIRRRLFHDDWSCIMF 61
D+SEDD+ K+ SDDSS +RSS+ G +FE +T+II RR FHDDW+ IMF
Sbjct: 142 DSSEDDNKKRYKATSDDSSSRRSSSIGFKPFTLSGNSFE--KTVIITRRCFHDDWNRIMF 201
Query: 62 TLKKQTEIEFSYEPFHANKAILTPFEDNANLLCSNKSINGWTTVGNSQVKFERWDTKKHA 121
+L+KQ+EI FSY+PF A+KAIL D+A LLCSNK NGW+TVGN QVKFE WD+ H+
Sbjct: 202 SLRKQSEIAFSYKPFQADKAILFLNPDHAKLLCSNKGANGWSTVGNYQVKFESWDSNLHS 261
Query: 122 CQTLIPSYGGWVRFRGVPLHLWNYESFVNIGKACGGFLAVAKETMEKESLVEAKIK---- 181
++IPSYGGW+RFRG+PLHLWNY +F +IG ACGGFL VAKETM+ + L++AKIK
Sbjct: 262 FHSVIPSYGGWLRFRGIPLHLWNYNTFQHIGSACGGFLDVAKETMQMDKLIDAKIKVRYN 321
Query: 182 -----------------------SPPPNERWFIERNVNFHGSFKIEVADDFDSLNPNAEE 241
P RW +ERNV HGSF+ + AD+FD N AE
Sbjct: 322 YIGFVPASILITDNQGENFIVTTVQPAEARWLVERNVRVHGSFRTKAADEFDQHNHLAET 381
Query: 242 FTFAEIDVILLENSKNQADNKQSKLDKNSNSNPTHAKKNSSSNSEVE 262
+T+ I E ++ D DK+S S T AKKN+SS SE +
Sbjct: 382 YTYNGFQAIPPEPTRTHGDYSIHNSDKHSISYHTQAKKNNSSESEYD 426
BLAST of MELO3C024617 vs. ExPASy TrEMBL
Match:
A0A5A7THG7 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold189G00100 PE=4 SV=1)
HSP 1 Score: 726.5 bits (1874), Expect = 5.6e-206
Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 0
Query: 1 MDNSEDDSGKKTNIHSDDSSCKRSSTTGHNMKAPHRKTFENGETIIIRRRLFHDDWSCIM 60
MDNSEDDSGKKTNIHSDDSSCKRSSTTGHNMKAPHRKTFENGETIIIRRRLFHDDWSCIM
Sbjct: 1 MDNSEDDSGKKTNIHSDDSSCKRSSTTGHNMKAPHRKTFENGETIIIRRRLFHDDWSCIM 60
Query: 61 FTLKKQTEIEFSYEPFHANKAILTPFEDNANLLCSNKSINGWTTVGNSQVKFERWDTKKH 120
FTLKKQTEIEFSYEPFHANKAILTPFEDNANLLCSNKSINGWTTVGNSQVKFERWDTKKH
Sbjct: 61 FTLKKQTEIEFSYEPFHANKAILTPFEDNANLLCSNKSINGWTTVGNSQVKFERWDTKKH 120
Query: 121 ACQTLIPSYGGWVRFRGVPLHLWNYESFVNIGKACGGFLAVAKETMEKESLVEAKIKSPP 180
ACQTLIPSYGGWVRFRGVPLHLWNYESFVNIGKACGGFLAVAKETMEKESLVEAKIKSPP
Sbjct: 121 ACQTLIPSYGGWVRFRGVPLHLWNYESFVNIGKACGGFLAVAKETMEKESLVEAKIKSPP 180
Query: 181 PNERWFIERNVNFHGSFKIEVADDFDSLNPNAEEFTFAEIDVILLENSKNQADNKQSKLD 240
PNERWFIERNVNFHGSFKIEVADDFDSLNPNAEEFTFAEIDVILLENSKNQADNKQSKLD
Sbjct: 181 PNERWFIERNVNFHGSFKIEVADDFDSLNPNAEEFTFAEIDVILLENSKNQADNKQSKLD 240
Query: 241 KNSNSNPTHAKKNSSSNSEVERKSGSECEDQQHSLANKDLNLTVDLGHLPPLRDLDATED 300
KNSNSNPTHAKKNSSSNSEVERKSGSECEDQQHSLANKDLNLTVDLGHLPPLRDLDATED
Sbjct: 241 KNSNSNPTHAKKNSSSNSEVERKSGSECEDQQHSLANKDLNLTVDLGHLPPLRDLDATED 300
Query: 301 VLAQVENAREPVQSKSIENSALGQETELQQEKMDEDQEALQIISDEERHNKFYLKEKALQ 360
VLAQVENAREPVQSKSIENSALGQETELQQEKMDEDQEALQIISDEERHNKFYLKEKALQ
Sbjct: 301 VLAQVENAREPVQSKSIENSALGQETELQQEKMDEDQEALQIISDEERHNKFYLKEKALQ 360
Query: 361 EISVTIA 368
EISVTIA
Sbjct: 361 EISVTIA 367
BLAST of MELO3C024617 vs. ExPASy TrEMBL
Match:
A0A5A7U199 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00620 PE=4 SV=1)
HSP 1 Score: 355.1 bits (910), Expect = 3.4e-94
Identity = 211/404 (52.23%), Postives = 243/404 (60.15%), Query Frame = 0
Query: 1 MDNSEDDSGKKTNIHSDDSSCKRSSTTGHNMKAPHRKTFENGETIIIRRRLFHDDWSCIM 60
M++S+D S KK N++ DDSSCKRSST H++K P RK E GET+II RRLFHDDWS IM
Sbjct: 126 MESSDDGSDKKNNVYYDDSSCKRSSTAAHSVKDPLRKALEYGETVIITRRLFHDDWSRIM 185
Query: 61 FTLKKQTEIEFSYEPFHANKAILTPFEDNANLLCSNKSINGWTTVGNSQVKFERWDTKKH 120
FTLKKQTEIEFSYE FHANKAILT EDNANLL + Q+ ++W+T
Sbjct: 186 FTLKKQTEIEFSYESFHANKAILTLSEDNANLLFQIR----------VQMDGQQWET--- 245
Query: 121 ACQTLIPSYGGWVRFRGVPLHLWNYESFVNIGKACGGFLAVAKETMEKESLVEAKIKSPP 180
P+YGGW+RF+GVPLHLWNY+SFVNIGKACGGFLAVAKETMEKE+L+EAKIK
Sbjct: 246 ------PNYGGWMRFKGVPLHLWNYDSFVNIGKACGGFLAVAKETMEKENLIEAKIKG-- 305
Query: 181 PNERWFIERNVNFHGSFKIEVADDFDSLNPNAEEFTFAEIDVILLENSKNQADNKQSKLD 240
RWFIERNVNFHG+FKIE ADDFD+LNPNAEEFTFAE I ENSKNQ+D+KQSK D
Sbjct: 306 ---RWFIERNVNFHGTFKIEAADDFDNLNPNAEEFTFAENHAIPPENSKNQSDSKQSKPD 365
Query: 241 KNSNSNPTHAKKNSSSNSE----------------------------------------- 300
K S+SNPT+AKKNSSS SE
Sbjct: 366 KTSDSNPTYAKKNSSSESEYDPFDQNSDDRRKEKGKAILSTYDQDICNYSTKSKRSAKRK 425
Query: 301 -------------------------------------------------------VERKS 309
++RK+
Sbjct: 426 VSFKSPGGYSSHSSDFRKRQNLSINERIEQFAANKAASSSKRVSPYKYYQKKYYRIKRKA 485
BLAST of MELO3C024617 vs. ExPASy TrEMBL
Match:
A0A5D3BKT8 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005570 PE=4 SV=1)
HSP 1 Score: 256.9 bits (655), Expect = 1.3e-64
Identity = 141/287 (49.13%), Postives = 180/287 (62.72%), Query Frame = 0
Query: 2 DNSEDDSGKKTNIHSDDSSCKRSSTTGHNMKAPHRKTFENGETIIIRRRLFHDDWSCIMF 61
D+SEDD+ K+ SDDSS +RSS+ G +FE +T+II RR FHDDW+ IMF
Sbjct: 142 DSSEDDNKKRYKATSDDSSSRRSSSIGFKPFTLSGNSFE--KTVIITRRCFHDDWNRIMF 201
Query: 62 TLKKQTEIEFSYEPFHANKAILTPFEDNANLLCSNKSINGWTTVGNSQVKFERWDTKKHA 121
+L+KQ+EI FSY+PF A+KAIL D+A LLCSNK NGW+TVGN QVKFE WD+ H+
Sbjct: 202 SLRKQSEIAFSYKPFQADKAILFLNSDHAKLLCSNKGANGWSTVGNYQVKFESWDSNLHS 261
Query: 122 CQTLIPSYGGWVRFRGVPLHLWNYESFVNIGKACGGFLAVAKETMEKESLVEAKIK---- 181
++IPSYGGW+RFRG+PLHLWNY +F +IG ACGGFL VAKETM+ + L++AKIK
Sbjct: 262 FHSVIPSYGGWLRFRGIPLHLWNYNTFQHIGSACGGFLDVAKETMQMDKLIDAKIKVRYN 321
Query: 182 -----------------------SPPPNERWFIERNVNFHGSFKIEVADDFDSLNPNAEE 241
P RW +ERNV HGSF+ + AD+FD N AE
Sbjct: 322 YTGFVPASILITDNQGENFIVTTVQPAEARWLVERNVRVHGSFRTKAADEFDQHNHLAET 381
Query: 242 FTFAEIDVILLENSKNQADNKQSKLDKNSNSNPTHAKKNSSSNSEVE 262
+T+ I E ++ D DK+S S T AKKN+SS SE +
Sbjct: 382 YTYNGFQAIPPEPTRTHGDYSIHNSDKHSISYHTQAKKNNSSESEYD 426
BLAST of MELO3C024617 vs. ExPASy TrEMBL
Match:
A0A5A7US62 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G003960 PE=4 SV=1)
HSP 1 Score: 256.5 bits (654), Expect = 1.7e-64
Identity = 141/287 (49.13%), Postives = 180/287 (62.72%), Query Frame = 0
Query: 2 DNSEDDSGKKTNIHSDDSSCKRSSTTGHNMKAPHRKTFENGETIIIRRRLFHDDWSCIMF 61
D+SEDD+ K+ SDDSS +RSS+ G +FE +T+II RR FHDDW+ IMF
Sbjct: 142 DSSEDDNKKRYKATSDDSSSRRSSSIGFKPFTLSGNSFE--KTVIITRRCFHDDWNRIMF 201
Query: 62 TLKKQTEIEFSYEPFHANKAILTPFEDNANLLCSNKSINGWTTVGNSQVKFERWDTKKHA 121
+L+KQ+EI FSY+PF A+KAIL D+A LLCSNK NGW+TVGN QVKFE WD+ H+
Sbjct: 202 SLRKQSEIAFSYKPFQADKAILFLNPDHAKLLCSNKGANGWSTVGNYQVKFESWDSNLHS 261
Query: 122 CQTLIPSYGGWVRFRGVPLHLWNYESFVNIGKACGGFLAVAKETMEKESLVEAKIK---- 181
++IPSYGGW+RFRG+PLHLWNY +F +IG ACGGFL VAKETM+ + L++AKIK
Sbjct: 262 FHSVIPSYGGWLRFRGIPLHLWNYNTFQHIGSACGGFLDVAKETMQMDKLIDAKIKVRYN 321
Query: 182 -----------------------SPPPNERWFIERNVNFHGSFKIEVADDFDSLNPNAEE 241
P RW +ERNV HGSF+ + AD+FD N AE
Sbjct: 322 YIGFVPASILITDNQGENFIVTTVQPAEARWLVERNVRVHGSFRTKAADEFDQHNHLAET 381
Query: 242 FTFAEIDVILLENSKNQADNKQSKLDKNSNSNPTHAKKNSSSNSEVE 262
+T+ I E ++ D DK+S S T AKKN+SS SE +
Sbjct: 382 YTYNGFQAIPPEPTRTHGDYSIHNSDKHSISYHTQAKKNNSSESEYD 426
BLAST of MELO3C024617 vs. ExPASy TrEMBL
Match:
A0A5D3CA17 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00050 PE=4 SV=1)
HSP 1 Score: 256.5 bits (654), Expect = 1.7e-64
Identity = 141/287 (49.13%), Postives = 180/287 (62.72%), Query Frame = 0
Query: 2 DNSEDDSGKKTNIHSDDSSCKRSSTTGHNMKAPHRKTFENGETIIIRRRLFHDDWSCIMF 61
D+SEDD+ K+ SDDSS +RSS+ G +FE +T+II RR FHDDW+ IMF
Sbjct: 142 DSSEDDNKKRYKATSDDSSSRRSSSIGFKPFTLSGNSFE--KTVIITRRCFHDDWNRIMF 201
Query: 62 TLKKQTEIEFSYEPFHANKAILTPFEDNANLLCSNKSINGWTTVGNSQVKFERWDTKKHA 121
+L+KQ+EI FSY+PF A+KAIL D+A LLCSNK NGW+TVGN QVKFE WD+ H+
Sbjct: 202 SLRKQSEIAFSYKPFQADKAILFLNPDHAKLLCSNKGANGWSTVGNYQVKFESWDSNLHS 261
Query: 122 CQTLIPSYGGWVRFRGVPLHLWNYESFVNIGKACGGFLAVAKETMEKESLVEAKIK---- 181
++IPSYGGW+RFRG+PLHLWNY +F +IG ACGGFL VAKETM+ + L++AKIK
Sbjct: 262 FHSVIPSYGGWLRFRGIPLHLWNYNTFQHIGSACGGFLDVAKETMQMDKLIDAKIKVRYN 321
Query: 182 -----------------------SPPPNERWFIERNVNFHGSFKIEVADDFDSLNPNAEE 241
P RW +ERNV HGSF+ + AD+FD N AE
Sbjct: 322 YIGFVPASILITDNQGENFIVTTVQPAEARWLVERNVRVHGSFRTKAADEFDQHNHLAET 381
Query: 242 FTFAEIDVILLENSKNQADNKQSKLDKNSNSNPTHAKKNSSSNSEVE 262
+T+ I E ++ D DK+S S T AKKN+SS SE +
Sbjct: 382 YTYNGFQAIPPEPTRTHGDYSIHNSDKHSISYHTQAKKNNSSESEYD 426
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0040719.1 | 1.2e-205 | 100.00 | hypothetical protein E6C27_scaffold529G00420 [Cucumis melo var. makuwa] >TYK1534... | [more] |
| KAA0047997.1 | 7.1e-94 | 52.23 | hypothetical protein E6C27_scaffold385G00620 [Cucumis melo var. makuwa] | [more] |
| KAA0056838.1 | 2.6e-64 | 49.13 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYJ993... | [more] |
| TYK08190.1 | 3.4e-64 | 49.13 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
| KAA0057507.1 | 3.4e-64 | 49.13 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7THG7 | 5.6e-206 | 100.00 | DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
| A0A5A7U199 | 3.4e-94 | 52.23 | DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
| A0A5D3BKT8 | 1.3e-64 | 49.13 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
| A0A5A7US62 | 1.7e-64 | 49.13 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
| A0A5D3CA17 | 1.7e-64 | 49.13 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
