MELO3C024590 (gene) Melon (DHL92) v4

Overview


Name	MELO3C024590
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	RING-H2 finger protein ATL70-like
Location	chr08: 8111962 .. 8113098 (-)
RNA-Seq Expression	MELO3C024590
Synteny	MELO3C024590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATCCCATCTTGGCAATTGGCAAATTAGCATTGACTTTGAATTGAGTATAGCCGTAAAATCCCCCAAGTAATCAATGAATCAAAAGACTTACAACAATGGCAACTAACAAATCCAATCTTCTCACCATTTTCCTTCTCCGCCTCTCCCTCCCACCGCAATGAACAACGGCACGGCCGAAACCGGCGGATTTCTCTCCTCATCCAACATCGGTGGTTTCGGCTACGGAATTGGCGTCTCCTTGGGGCTTTTGATTCTCATCACTACAATCCTCTTGGCTTCCTATTACTGTACCAGAAACGGCCTATCCTCCACCTCCGTCATTCAGAGTACTGCCAGTCGCTCGCCGCCGCAAGCGGTGGCGGAATTAGATTCCGTCGTTGTCGAAATCGGACTCGATCAGGAAACGATTACGAGTTATCCGAAATTGCTGTATTCTGAAGCGAAGCTTCAGAAGAACGATTCGACTGCTTCTTGTTGTTCAATCTGTTTGGCTGATTATAAGAACTCGGATGTTCTTCGGCTTTTGCCTGATTGCGGTCATCTCTTTCATCTCAAGTGCGTCGATCCGTGGCTTAGACTTCATCCGACCTGTCCGGTTTGCCGGACGTCGCCGATTCCTACACCGTTGTCGACTCCTCTAGCGGAGCAAGTTCCATTAGCGAGCCGGCGCGATTGAAGAAGAAGAACGTAACACGATCTGGATTTATCGAATCGAGGTCGTTTTCGCCCTTTTTTGTTTTGTTTTGTTTTGTTTTACAGATTGATTTCATTGCAATGGATCTCTATAGTTGGAAGTACTCACAATCAATCTCCTTCAAGGTTAACAAAATTTTTTTAGTTTATTCAATGATATACTCATTTTGGTATACTTTGTTCTGGTAATGTTTTTTTAGTACATTTTGAATCTACACTTCAGATGAATTCTTGTGTATGGTAGTTTTGTTTTATTTGTAAAATATTTAATATAAATTTTATTACTATATGTGAAAATAGTCTTTTTTTTTTCTTAATCATAGCGATTTCTCTTTTTTTCTTTTTTTCTTTTTTTTTTACATTGATGTTGAAGACAATATTTTAAGAGAGAATCATATTTTCTCCCTTAATATTATTAATTGGAACTTTCAATTTTACTTTT

mRNA sequence

GAATCCCATCTTGGCAATTGGCAAATTAGCATTGACTTTGAATTGAGTATAGCCGTAAAATCCCCCAAGTAATCAATGAATCAAAAGACTTACAACAATGGCAACTAACAAATCCAATCTTCTCACCATTTTCCTTCTCCGCCTCTCCCTCCCACCGCAATGAACAACGGCACGGCCGAAACCGGCGGATTTCTCTCCTCATCCAACATCGGTGGTTTCGGCTACGGAATTGGCGTCTCCTTGGGGCTTTTGATTCTCATCACTACAATCCTCTTGGCTTCCTATTACTGTACCAGAAACGGCCTATCCTCCACCTCCGTCATTCAGAGTACTGCCAGTCGCTCGCCGCCGCAAGCGGTGGCGGAATTAGATTCCGTCGTTGTCGAAATCGGACTCGATCAGGAAACGATTACGAGTTATCCGAAATTGCTGTATTCTGAAGCGAAGCTTCAGAAGAACGATTCGACTGCTTCTTGTTGTTCAATCTGTTTGGCTGATTATAAGAACTCGGATGTTCTTCGGCTTTTGCCTGATTGCGGTCATCTCTTTCATCTCAAGTGCGTCGATCCGTGGCTTAGACTTCATCCGACCTGTCCGGTTTGCCGGACGTCGCCGATTCCTACACCGTTGTCGACTCCTCTAGCGGAGCAAGTTCCATTAGCGAGCCGGCGCGATTGAAGAAGAAGAACGTAACACGATCTGGATTTATCGAATCGAGGTCGTTTTCGCCCTTTTTTGTTTTGTTTTGTTTTGTTTTACAGATTGATTTCATTGCAATGGATCTCTATAGTTGGAAGTACTCACAATCAATCTCCTTCAAGGTTAACAAAATTTTTTTAGTTTATTCAATGATATACTCATTTTGGTATACTTTGTTCTGGTAATGTTTTTTTAGTACATTTTGAATCTACACTTCAGATGAATTCTTGTGTATGGTAGTTTTGTTTTATTTGTAAAATATTTAATATAAATTTTATTACTATATGTGAAAATAGTCTTTTTTTTTTCTTAATCATAGCGATTTCTCTTTTTTTCTTTTTTTCTTTTTTTTTTACATTGATGTTGAAGACAATATTTTAAGAGAGAATCATATTTTCTCCCTTAATATTATTAATTGGAACTTTCAATTTTACTTTT

Coding sequence (CDS)

ATGAACAACGGCACGGCCGAAACCGGCGGATTTCTCTCCTCATCCAACATCGGTGGTTTCGGCTACGGAATTGGCGTCTCCTTGGGGCTTTTGATTCTCATCACTACAATCCTCTTGGCTTCCTATTACTGTACCAGAAACGGCCTATCCTCCACCTCCGTCATTCAGAGTACTGCCAGTCGCTCGCCGCCGCAAGCGGTGGCGGAATTAGATTCCGTCGTTGTCGAAATCGGACTCGATCAGGAAACGATTACGAGTTATCCGAAATTGCTGTATTCTGAAGCGAAGCTTCAGAAGAACGATTCGACTGCTTCTTGTTGTTCAATCTGTTTGGCTGATTATAAGAACTCGGATGTTCTTCGGCTTTTGCCTGATTGCGGTCATCTCTTTCATCTCAAGTGCGTCGATCCGTGGCTTAGACTTCATCCGACCTGTCCGGTTTGCCGGACGTCGCCGATTCCTACACCGTTGTCGACTCCTCTAGCGGAGCAAGTTCCATTAGCGAGCCGGCGCGATTGA

Protein sequence

MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTASRSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD

Homology

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BLAST of MELO3C024590 vs. NCBI nr
Match: XP_008462625.1 (PREDICTED: RING-H2 finger protein ATL70-like [Cucumis melo] >KAA0025213.1 RING-H2 finger protein ATL70-like [Cucumis melo var. makuwa] >TYK07452.1 RING-H2 finger protein ATL70-like [Cucumis melo var. makuwa])

HSP 1 Score: 339.7 bits (870), Expect = 1.4e-89
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTAS 60
           MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTAS
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTAS 60

Query: 61  RSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL
Sbjct: 61  RSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 173
           RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

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BLAST of MELO3C024590 vs. NCBI nr
Match: XP_004143342.1 (RING-H2 finger protein ATL70 [Cucumis sativus] >KGN48327.1 hypothetical protein Csa_003973 [Cucumis sativus])

HSP 1 Score: 321.6 bits (823), Expect = 4.1e-84
Identity = 161/172 (93.60%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTAS 60
           MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS+ V ++  +
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVVQRTPPN 60

Query: 61  RSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RSPPQAV E+DSVVV+IGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL
Sbjct: 61  RSPPQAVGEMDSVVVDIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 173
           RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

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BLAST of MELO3C024590 vs. NCBI nr
Match: XP_038883587.1 (RING-H2 finger protein ATL70-like [Benincasa hispida])

HSP 1 Score: 307.0 bits (785), Expect = 1.0e-79
Identity = 155/172 (90.12%), Postives = 162/172 (94.19%), Query Frame = 0


Query: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTAS 60
           MNN TA++GGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRN LSSTS     A+
Sbjct: 1   MNNSTADSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNSLSSTS-----AN 60

Query: 61  RSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RSPPQ   +L++V+VEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL
Sbjct: 61  RSPPQTEEQLEAVIVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 173
           RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 167

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BLAST of MELO3C024590 vs. NCBI nr
Match: XP_023544988.1 (RING-H2 finger protein ATL70-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.0 bits (772), Expect = 3.3e-78
Identity = 150/172 (87.21%), Postives = 163/172 (94.77%), Query Frame = 0


Query: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTAS 60
           MNNGTA++GGFLSS+NIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSV++  ++
Sbjct: 1   MNNGTADSGGFLSSNNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERNSN 60

Query: 61  RSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RSPPQA  E  +VVV++GLDQETI SYPKLLYSEAKL KNDS+ASCCSICLADYKNS+VL
Sbjct: 61  RSPPQAEGEA-AVVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 173
           R LPDCGHLFHLKC+DPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 171

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BLAST of MELO3C024590 vs. NCBI nr
Match: XP_022977896.1 (RING-H2 finger protein ATL70-like [Cucurbita maxima])

HSP 1 Score: 301.6 bits (771), Expect = 4.3e-78
Identity = 150/172 (87.21%), Postives = 162/172 (94.19%), Query Frame = 0


Query: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTAS 60
           MNNGTA++GGFLSS+NIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSV++   +
Sbjct: 1   MNNGTADSGGFLSSNNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERNTN 60

Query: 61  RSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RSPPQA  E  +VVV++GLDQETI SYPKLLYSEAKL KNDS+ASCCSICLADYKNS+VL
Sbjct: 61  RSPPQAEGEA-AVVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 173
           R LPDCGHLFHLKC+DPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 171

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BLAST of MELO3C024590 vs. ExPASy Swiss-Prot
Match: Q8RX29 (RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 5.7e-49
Identity = 101/162 (62.35%), Postives = 123/162 (75.93%), Query Frame = 0


Query: 10  GFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTASRSPPQAVAE 69
           G L + +IGGF YGIGVS+G+L+LITTI L SYYCTRN LSS+    S  ++   +    
Sbjct: 54  GLLGTDDIGGFRYGIGVSIGVLLLITTITLTSYYCTRNQLSSS---PSQTNQDSTRIHHH 113

Query: 70  LDSVVVEI--GLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPDCG 129
              V++++  GLD++TI SYPK+LYSEA   K  +TASCC+ICL DYK   +LR LPDC 
Sbjct: 114 HHHVIIDVVPGLDEDTIQSYPKILYSEA---KGPTTASCCAICLGDYKGKHLLRQLPDCN 173

Query: 130 HLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLAS 170
           HLFHLKC+D WLRL+PTCPVCRTSP+PTPLSTPLAE VPLAS
Sbjct: 174 HLFHLKCIDTWLRLNPTCPVCRTSPLPTPLSTPLAEVVPLAS 209

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BLAST of MELO3C024590 vs. ExPASy Swiss-Prot
Match: Q9FG21 (Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana OX=3702 GN=ATL71 PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 9.5e-44
Identity = 95/177 (53.67%), Postives = 120/177 (67.80%), Query Frame = 0


Query: 13  SSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVI---------QSTASRSP 72
           ++  +GG  YGIGVS+G+L+LITTI L SYYCTR+ +S++            +S  +  P
Sbjct: 16  NTDRMGGLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRESNGTLPP 75

Query: 73  PQ-----AVAELDSVVVEI-GLDQETITSYPKLLYSEAK----LQKNDSTASCCSICLAD 132
            Q        E D+VVVE+ GL +E I  +PKL Y EA+    LQK  ST SCCSICLAD
Sbjct: 76  GQERFDFEDDESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLAD 135

Query: 133 YKNSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASR 171
           YK  D++R+LPDC HLFH  CVDPWLRLHPTCPVCRTSP+P+P  TP+A+ VP + R
Sbjct: 136 YKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVADVVPFSRR 192

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BLAST of MELO3C024590 vs. ExPASy Swiss-Prot
Match: O82353 (RING-H2 finger protein ATL67 OS=Arabidopsis thaliana OX=3702 GN=ATL67 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 9.2e-31
Identity = 76/175 (43.43%), Postives = 109/175 (62.29%), Query Frame = 0


Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTASRSP----PQAV------- 78
           GFGY I ++LG L+L++T+LL+SY C R+    T+ ++ST  R      P+ +       
Sbjct: 34  GFGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDRGGSVILPRIIFVAEEDN 93

Query: 79  AELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTAS----------CCSICLADYKNS 138
            +L++  V +GLDQ  I SYPK  +S     K+ S AS           CSICL +YK +
Sbjct: 94  EDLEAGDVVVGLDQAVINSYPKFHFS-----KDTSAASSDGFGGGGDTTCSICLCEYKEA 153

Query: 139 DVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIP----TPLSTPLAEQVPLA 169
           ++LR++P+C H FHL C+D WL+L+ +CPVCR SP+P    TPLSTPL+E VPL+
Sbjct: 154 EMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPLSEVVPLS 203

[Close]

BLAST of MELO3C024590 vs. ExPASy Swiss-Prot
Match: Q9FL42 (Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana OX=3702 GN=ATL69 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.4e-26
Identity = 62/150 (41.33%), Postives = 91/150 (60.67%), Query Frame = 0


Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTASRSPPQAVAELDSVVVEIG 78
           G GYGI +++ +L+LI+ I+LASY C R+  +      S      P   AE     V++G
Sbjct: 12  GLGYGIAIAVSILVLISFIMLASYICIRSKSTGRDEATSDVVLDLPSPAAE-----VKLG 71

Query: 79  LDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPDCGHLFHLKCVDPW 138
           LD+  I SYP+++  +++     +    CSICL DY+  + +R +P+C H FH  CVD W
Sbjct: 72  LDRPVIESYPRIVLGDSRRLPRPNNGP-CSICLCDYEAREPVRCIPECNHCFHTDCVDEW 131

Query: 139 LRLHPTCPVCRTSPIPTPLSTPLAEQVPLA 169
           LR   TCP+CR SP P+ L+TPL++ VPLA
Sbjct: 132 LRTSATCPLCRNSPAPSRLATPLSDLVPLA 155

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BLAST of MELO3C024590 vs. ExPASy Swiss-Prot
Match: Q9M313 (RING-H2 finger protein ATL68 OS=Arabidopsis thaliana OX=3702 GN=ATL68 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.7e-24
Identity = 68/177 (38.42%), Postives = 98/177 (55.37%), Query Frame = 0


Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTASRSPPQA-----------V 78
           G GY I ++LG L+LI+TI+L+SY C R      S   + A+ +   +           V
Sbjct: 25  GLGYSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASFSDRGVIVPRIIFV 84

Query: 79  AELDSV----VVEIGLDQETITSYPKLLYSE--------AKLQKNDSTASCCSICLADYK 138
           AE D +    VV  GLD   I SYPK  +++              +   + CSICL +Y 
Sbjct: 85  AEDDDLESGNVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYM 144

Query: 139 NSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIP----TPLSTPLAEQVPLA 169
             ++LR++P+C H FH+ C+D WL+L+ +CPVCR SP+P    TP STPL+E VPL+
Sbjct: 145 EEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQSTPLSEVVPLS 201

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BLAST of MELO3C024590 vs. ExPASy TrEMBL
Match: A0A5A7SKL1 (RING-H2 finger protein ATL70-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001830 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 7.0e-90
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTAS 60
           MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTAS
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTAS 60

Query: 61  RSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL
Sbjct: 61  RSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 173
           RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

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BLAST of MELO3C024590 vs. ExPASy TrEMBL
Match: A0A1S3CHE9 (RING-H2 finger protein ATL70-like OS=Cucumis melo OX=3656 GN=LOC103500941 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 7.0e-90
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTAS 60
           MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTAS
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTAS 60

Query: 61  RSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL
Sbjct: 61  RSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 173
           RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

[Close]

BLAST of MELO3C024590 vs. ExPASy TrEMBL
Match: A0A0A0KIW7 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G476670 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.0e-84
Identity = 161/172 (93.60%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTAS 60
           MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS+ V ++  +
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVVQRTPPN 60

Query: 61  RSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RSPPQAV E+DSVVV+IGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL
Sbjct: 61  RSPPQAVGEMDSVVVDIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 173
           RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

[Close]

BLAST of MELO3C024590 vs. ExPASy TrEMBL
Match: A0A6J1IL86 (RING-H2 finger protein ATL70-like OS=Cucurbita maxima OX=3661 GN=LOC111478050 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.1e-78
Identity = 150/172 (87.21%), Postives = 162/172 (94.19%), Query Frame = 0


Query: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTAS 60
           MNNGTA++GGFLSS+NIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSV++   +
Sbjct: 1   MNNGTADSGGFLSSNNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERNTN 60

Query: 61  RSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RSPPQA  E  +VVV++GLDQETI SYPKLLYSEAKL KNDS+ASCCSICLADYKNS+VL
Sbjct: 61  RSPPQAEGEA-AVVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 173
           R LPDCGHLFHLKC+DPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 171

[Close]

BLAST of MELO3C024590 vs. ExPASy TrEMBL
Match: A0A6J1EJP9 (RING-H2 finger protein ATL70-like OS=Cucurbita moschata OX=3662 GN=LOC111433226 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 4.7e-78
Identity = 149/172 (86.63%), Postives = 162/172 (94.19%), Query Frame = 0


Query: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTAS 60
           MNNGTA++GGFLSS+NIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSV++  ++
Sbjct: 1   MNNGTADSGGFLSSNNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERNSN 60

Query: 61  RSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RSPPQA  E  + VV++GLDQETI SYPKLLYSEAKL KNDS+ASCCSICLADYKNS+VL
Sbjct: 61  RSPPQAEGEA-AAVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 173
           R LPDCGHLFHLKC+DPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 171

[Close]

BLAST of MELO3C024590 vs. TAIR 10
Match: AT2G35910.1 (RING/U-box superfamily protein )

HSP 1 Score: 195.3 bits (495), Expect = 4.1e-50
Identity = 101/162 (62.35%), Postives = 123/162 (75.93%), Query Frame = 0


Query: 10  GFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTASRSPPQAVAE 69
           G L + +IGGF YGIGVS+G+L+LITTI L SYYCTRN LSS+    S  ++   +    
Sbjct: 54  GLLGTDDIGGFRYGIGVSIGVLLLITTITLTSYYCTRNQLSSS---PSQTNQDSTRIHHH 113

Query: 70  LDSVVVEI--GLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPDCG 129
              V++++  GLD++TI SYPK+LYSEA   K  +TASCC+ICL DYK   +LR LPDC 
Sbjct: 114 HHHVIIDVVPGLDEDTIQSYPKILYSEA---KGPTTASCCAICLGDYKGKHLLRQLPDCN 173

Query: 130 HLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLAS 170
           HLFHLKC+D WLRL+PTCPVCRTSP+PTPLSTPLAE VPLAS
Sbjct: 174 HLFHLKCIDTWLRLNPTCPVCRTSPLPTPLSTPLAEVVPLAS 209

[Close]

BLAST of MELO3C024590 vs. TAIR 10
Match: AT5G06490.1 (RING/U-box superfamily protein )

HSP 1 Score: 177.9 bits (450), Expect = 6.7e-45
Identity = 95/177 (53.67%), Postives = 120/177 (67.80%), Query Frame = 0


Query: 13  SSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVI---------QSTASRSP 72
           ++  +GG  YGIGVS+G+L+LITTI L SYYCTR+ +S++            +S  +  P
Sbjct: 16  NTDRMGGLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRESNGTLPP 75

Query: 73  PQ-----AVAELDSVVVEI-GLDQETITSYPKLLYSEAK----LQKNDSTASCCSICLAD 132
            Q        E D+VVVE+ GL +E I  +PKL Y EA+    LQK  ST SCCSICLAD
Sbjct: 76  GQERFDFEDDESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLAD 135

Query: 133 YKNSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASR 171
           YK  D++R+LPDC HLFH  CVDPWLRLHPTCPVCRTSP+P+P  TP+A+ VP + R
Sbjct: 136 YKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVADVVPFSRR 192

[Close]

BLAST of MELO3C024590 vs. TAIR 10
Match: AT2G46160.1 (RING/U-box superfamily protein )

HSP 1 Score: 134.8 bits (338), Expect = 6.5e-32
Identity = 76/175 (43.43%), Postives = 109/175 (62.29%), Query Frame = 0


Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTASRSP----PQAV------- 78
           GFGY I ++LG L+L++T+LL+SY C R+    T+ ++ST  R      P+ +       
Sbjct: 34  GFGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDRGGSVILPRIIFVAEEDN 93

Query: 79  AELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTAS----------CCSICLADYKNS 138
            +L++  V +GLDQ  I SYPK  +S     K+ S AS           CSICL +YK +
Sbjct: 94  EDLEAGDVVVGLDQAVINSYPKFHFS-----KDTSAASSDGFGGGGDTTCSICLCEYKEA 153

Query: 139 DVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIP----TPLSTPLAEQVPLA 169
           ++LR++P+C H FHL C+D WL+L+ +CPVCR SP+P    TPLSTPL+E VPL+
Sbjct: 154 EMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPLSEVVPLS 203

[Close]

BLAST of MELO3C024590 vs. TAIR 10
Match: AT5G07040.1 (RING/U-box superfamily protein )

HSP 1 Score: 120.9 bits (302), Expect = 9.8e-28
Identity = 62/150 (41.33%), Postives = 91/150 (60.67%), Query Frame = 0


Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTASRSPPQAVAELDSVVVEIG 78
           G GYGI +++ +L+LI+ I+LASY C R+  +      S      P   AE     V++G
Sbjct: 12  GLGYGIAIAVSILVLISFIMLASYICIRSKSTGRDEATSDVVLDLPSPAAE-----VKLG 71

Query: 79  LDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPDCGHLFHLKCVDPW 138
           LD+  I SYP+++  +++     +    CSICL DY+  + +R +P+C H FH  CVD W
Sbjct: 72  LDRPVIESYPRIVLGDSRRLPRPNNGP-CSICLCDYEAREPVRCIPECNHCFHTDCVDEW 131

Query: 139 LRLHPTCPVCRTSPIPTPLSTPLAEQVPLA 169
           LR   TCP+CR SP P+ L+TPL++ VPLA
Sbjct: 132 LRTSATCPLCRNSPAPSRLATPLSDLVPLA 155

[Close]

BLAST of MELO3C024590 vs. TAIR 10
Match: AT3G61550.1 (RING/U-box superfamily protein )

HSP 1 Score: 112.8 bits (281), Expect = 2.7e-25
Identity = 68/177 (38.42%), Postives = 98/177 (55.37%), Query Frame = 0


Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTASRSPPQA-----------V 78
           G GY I ++LG L+LI+TI+L+SY C R      S   + A+ +   +           V
Sbjct: 25  GLGYSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASFSDRGVIVPRIIFV 84

Query: 79  AELDSV----VVEIGLDQETITSYPKLLYSE--------AKLQKNDSTASCCSICLADYK 138
           AE D +    VV  GLD   I SYPK  +++              +   + CSICL +Y 
Sbjct: 85  AEDDDLESGNVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYM 144

Query: 139 NSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIP----TPLSTPLAEQVPLA 169
             ++LR++P+C H FH+ C+D WL+L+ +CPVCR SP+P    TP STPL+E VPL+
Sbjct: 145 EEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQSTPLSEVVPLS 201

The following BLAST results are available for this feature:

BLAST of MELO3C024590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462625.1	1.4e-89	100.00	PREDICTED: RING-H2 finger protein ATL70-like [Cucumis melo] >KAA0025213.1 RING-H...	[more]
XP_004143342.1	4.1e-84	93.60	RING-H2 finger protein ATL70 [Cucumis sativus] >KGN48327.1 hypothetical protein ...	[more]
XP_038883587.1	1.0e-79	90.12	RING-H2 finger protein ATL70-like [Benincasa hispida]	[more]
XP_023544988.1	3.3e-78	87.21	RING-H2 finger protein ATL70-like [Cucurbita pepo subsp. pepo]	[more]
XP_022977896.1	4.3e-78	87.21	RING-H2 finger protein ATL70-like [Cucurbita maxima]	[more]

BLAST of MELO3C024590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RX29	5.7e-49	62.35	RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1	[more]
Q9FG21	9.5e-44	53.67	Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana OX=3702 GN=ATL71 P...	[more]
O82353	9.2e-31	43.43	RING-H2 finger protein ATL67 OS=Arabidopsis thaliana OX=3702 GN=ATL67 PE=2 SV=1	[more]
Q9FL42	1.4e-26	41.33	Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana OX=3702 GN=ATL69 P...	[more]
Q9M313	3.7e-24	38.42	RING-H2 finger protein ATL68 OS=Arabidopsis thaliana OX=3702 GN=ATL68 PE=2 SV=1	[more]

BLAST of MELO3C024590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SKL1	7.0e-90	100.00	RING-H2 finger protein ATL70-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3CHE9	7.0e-90	100.00	RING-H2 finger protein ATL70-like OS=Cucumis melo OX=3656 GN=LOC103500941 PE=4 S...	[more]
A0A0A0KIW7	2.0e-84	93.60	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G476670 P...	[more]
A0A6J1IL86	2.1e-78	87.21	RING-H2 finger protein ATL70-like OS=Cucurbita maxima OX=3661 GN=LOC111478050 PE...	[more]
A0A6J1EJP9	4.7e-78	86.63	RING-H2 finger protein ATL70-like OS=Cucurbita moschata OX=3662 GN=LOC111433226 ...	[more]

BLAST of MELO3C024590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35910.1	4.1e-50	62.35	RING/U-box superfamily protein	[more]
AT5G06490.1	6.7e-45	53.67	RING/U-box superfamily protein	[more]
AT2G46160.1	6.5e-32	43.43	RING/U-box superfamily protein	[more]
AT5G07040.1	9.8e-28	41.33	RING/U-box superfamily protein	[more]
AT3G61550.1	2.7e-25	38.42	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 107..148 e-value: 1.9E-7 score: 40.8
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 107..149 e-value: 1.5E-12 score: 47.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 107..149 score: 12.872856
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 68..153 e-value: 2.1E-22 score: 80.6
None	No IPR available	PANTHER	PTHR46719	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 4..170
None	No IPR available	PANTHER	PTHR46719:SF2	RING-H2 FINGER PROTEIN ATL70-LIKE	coord: 4..170
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 106..149 e-value: 3.33884E-20 score: 76.9569
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 83..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C024590.1	MELO3C024590.1	mRNA