MELO3C024579.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C024579.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionTranscription termination factor MTEF1
Locationchr08: 8008165 .. 8010297 (+)
RNA-Seq ExpressionMELO3C024579.jh1
SyntenyMELO3C024579.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCCCTCAGTTAAACCCCACAAGCTCTCCATTAACCATGCAATGGCGGATTCGTCTCTTCACCTCCTCTCCAATGGCGGATTCATCCGCCATTCTTCTCCTTCCCCTCTTTTCCCCTCTCTTCCCCGCTTCAGAACCCTCCATTTCCCCGTACTTTCCAATTCCAGAACCTCCTTCATCTTCCCTTCCAAACTCCCTCCCCGCGTCCCCACCATTCCTCCCCTCTCCTCCCCGCTCCCTCCATCTCCGCCTCACACCGACCATCACTCCGACTTTCAGGAGAAAATGCTCTTCCTCGACTCCATCGGCATCGACTTCCTCTCCGTCATCAAAGACCACCCTCCCGTCGCCTCCGCTTCCCTCCCCGACATCAGATCAGCCGTCGATTTCATGACCTCCATGAATTTCACCGCCCTCGAATTCCGTCGAATCGTCGGTATGTGCCCTGAGGTTCTCACCTCTCGCGCTTCTGATCTCATCCCTATCTTCACCTTCCTCCTCCGCGAAGCTCGAGTCGACGGTTCCGACATCAAACGCGTTATCAATCGACGCCCTAGATTGTTAGCCTGTAGCGTGAAGGATCAGCTCCGTCCAACTCTCTACTTCCTGCAAAGCATCGGCATATCCGAGGTACATAAACACACATCCTTACTCTCATGTAGCGTTGAAGAGAAACTGATTCCGAGAATCGAGTTCTTCGAGAACTTAGGGTTTTGCCGACGGGATGCTTTGATAATGTTCCGGCGATTCCCGCAGCTGTTTTGCTATAGCATAAAGGAGAATCTGGAACCGAAACTTAATTACTTTGTGGTGGAAATGGGGAGAGAATTGAAAGAGTTGAAGGAATTTCCTCATTATTTCTCGTTTAGTTTAGAGAACAGGATCAAGCCAAGACATCAAAGCTGTGTGGAGAAGGGAGTTTGTTTTCCATTGCCGGAGTTGTTGAAAAGCAGTGAGATGAAATTCCGGGAGAAATTGGAGGTATGTTGTGATTCTTCAATACCCTTTAGAACTTCTCCTTTGTGGTGTACAAAATTGTGATAAATTCAAATTTCTTTAATCCAAAAGTATAGAATTTTCATAGCTCTCGGTTTCTATCTTCATTTCAATTCTGATATGATTATTTCCTTGGGTTCTTACAGTTTTAATTAGAGGTTTAACATAAGATTTGGCCTCATAATTCCCATTTAGTGGAACAACACAATATTTTAGATAGTTTAGGTTCTTCAGTTTAACCAATATGTGAATAATAGTAAATGGAAAAATATTTTAGATAGTTTTGGTTTAGGTAGATTTTAGGAATAGATGCAAATGTAGCAATTATATTCAAAATAATTAAGTATATAACAACATTTATTGATAGACCATGTAGCAAATGTTGTCTATCACTGATAAACCATAAGAGTCTATCAAAACCATAAGAGTCTATCAACGAAAGAAGTTATCATTGATAGACTCTGTTATATTTGCAATTTTTTTAAAATATTGCTACATATTTAATAATTATTCTAAAAATTGCCACCTATTATAATTAATCTAGATTTTAATATCTTAGATTTTCCTTCTTTTTAAGTATAACAATAAGAAAAGTTAAATTACATAGATCAAAATAATATTTAAACCTGTTAAAAAAATTATGGTTGTTCTACGAGTGATTCTTTTGCACTAAAACGTGGGTTTTTGAAATAGTTGTGTTTGTTTTATTGAGCAGCCGTGGGAGTGGGAGTGAGTAGAGTAGTGGTATGAGAATTGCACCATAATTAAATGACCAAAAAATATGATAGATCAAGCTTTGGCTCAAGAAATATTTAGCATCTTGCATTGGAACAAGCAGAGTCCTGCATTTTTCTTACAATATGTGTAGCTCACTCACTCCCTTCTCCATTATAATTTTGTTGATGTAATGCTCTTGAGGTCGGAAATTCAAATGTTCATTTTTCTATTTGTTGTACTAAAAGTACGGTAAACAAATCCAAAGGATTTTAGACCACGTTGTTCAATGACTTTTGGGTACAAATCCCACAATGTATAATGTATAGCGTGTTCGTCTGCAAAAATTCAAATGAAATTGTGATGTTTATTACGGGTAAATTTTTTTGTTCCCTATGTATAAAAGTTAGAATAAGTTCTGGA

mRNA sequence

TTTCCCTCAGTTAAACCCCACAAGCTCTCCATTAACCATGCAATGGCGGATTCGTCTCTTCACCTCCTCTCCAATGGCGGATTCATCCGCCATTCTTCTCCTTCCCCTCTTTTCCCCTCTCTTCCCCGCTTCAGAACCCTCCATTTCCCCGTACTTTCCAATTCCAGAACCTCCTTCATCTTCCCTTCCAAACTCCCTCCCCGCGTCCCCACCATTCCTCCCCTCTCCTCCCCGCTCCCTCCATCTCCGCCTCACACCGACCATCACTCCGACTTTCAGGAGAAAATGCTCTTCCTCGACTCCATCGGCATCGACTTCCTCTCCGTCATCAAAGACCACCCTCCCGTCGCCTCCGCTTCCCTCCCCGACATCAGATCAGCCGTCGATTTCATGACCTCCATGAATTTCACCGCCCTCGAATTCCGTCGAATCGTCGGTATGTGCCCTGAGGTTCTCACCTCTCGCGCTTCTGATCTCATCCCTATCTTCACCTTCCTCCTCCGCGAAGCTCGAGTCGACGGTTCCGACATCAAACGCGTTATCAATCGACGCCCTAGATTGTTAGCCTGTAGCGTGAAGGATCAGCTCCGTCCAACTCTCTACTTCCTGCAAAGCATCGGCATATCCGAGGTACATAAACACACATCCTTACTCTCATGTAGCGTTGAAGAGAAACTGATTCCGAGAATCGAGTTCTTCGAGAACTTAGGGTTTTGCCGACGGGATGCTTTGATAATGTTCCGGCGATTCCCGCAGCTGTTTTGCTATAGCATAAAGGAGAATCTGGAACCGAAACTTAATTACTTTGTGGTGGAAATGGGGAGAGAATTGAAAGAGTTGAAGGAATTTCCTCATTATTTCTCGTTTAGTTTAGAGAACAGGATCAAGCCAAGACATCAAAGCTGTGTGGAGAAGGGAGTTTGTTTTCCATTGCCGGAGTTGTTGAAAAGCAGTGAGATGAAATTCCGGGAGAAATTGGAGCCGTGGGAGTGGGAGTGAGTAGAGTAGTGGTATGAGAATTGCACCATAATTAAATGACCAAAAAATATGATAGATCAAGCTTTGGCTCAAGAAATATTTAGCATCTTGCATTGGAACAAGCAGAGTCCTGCATTTTTCTTACAATATGTGTAGCTCACTCACTCCCTTCTCCATTATAATTTTGTTGATGTAATGCTCTTGAGGTCGGAAATTCAAATGTTCATTTTTCTATTTGTTGTACTAAAAGTACGGTAAACAAATCCAAAGGATTTTAGACCACGTTGTTCAATGACTTTTGGGTACAAATCCCACAATGTATAATGTATAGCGTGTTCGTCTGCAAAAATTCAAATGAAATTGTGATGTTTATTACGGGTAAATTTTTTTGTTCCCTATGTATAAAAGTTAGAATAAGTTCTGGA

Coding sequence (CDS)

ATGGCGGATTCGTCTCTTCACCTCCTCTCCAATGGCGGATTCATCCGCCATTCTTCTCCTTCCCCTCTTTTCCCCTCTCTTCCCCGCTTCAGAACCCTCCATTTCCCCGTACTTTCCAATTCCAGAACCTCCTTCATCTTCCCTTCCAAACTCCCTCCCCGCGTCCCCACCATTCCTCCCCTCTCCTCCCCGCTCCCTCCATCTCCGCCTCACACCGACCATCACTCCGACTTTCAGGAGAAAATGCTCTTCCTCGACTCCATCGGCATCGACTTCCTCTCCGTCATCAAAGACCACCCTCCCGTCGCCTCCGCTTCCCTCCCCGACATCAGATCAGCCGTCGATTTCATGACCTCCATGAATTTCACCGCCCTCGAATTCCGTCGAATCGTCGGTATGTGCCCTGAGGTTCTCACCTCTCGCGCTTCTGATCTCATCCCTATCTTCACCTTCCTCCTCCGCGAAGCTCGAGTCGACGGTTCCGACATCAAACGCGTTATCAATCGACGCCCTAGATTGTTAGCCTGTAGCGTGAAGGATCAGCTCCGTCCAACTCTCTACTTCCTGCAAAGCATCGGCATATCCGAGGTACATAAACACACATCCTTACTCTCATGTAGCGTTGAAGAGAAACTGATTCCGAGAATCGAGTTCTTCGAGAACTTAGGGTTTTGCCGACGGGATGCTTTGATAATGTTCCGGCGATTCCCGCAGCTGTTTTGCTATAGCATAAAGGAGAATCTGGAACCGAAACTTAATTACTTTGTGGTGGAAATGGGGAGAGAATTGAAAGAGTTGAAGGAATTTCCTCATTATTTCTCGTTTAGTTTAGAGAACAGGATCAAGCCAAGACATCAAAGCTGTGTGGAGAAGGGAGTTTGTTTTCCATTGCCGGAGTTGTTGAAAAGCAGTGAGATGAAATTCCGGGAGAAATTGGAGCCGTGGGAGTGGGAGTGA

Protein sequence

MADSSLHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIFPSKLPPRVPTIPPLSSPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKLEPWEWE
Homology
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BLAST of MELO3C024579.jh1 vs. NCBI nr
Match: XP_016902903.1 (PREDICTED: transcription termination factor MTEF1, chloroplastic [Cucumis melo])

HSP 1 Score: 641 bits (1654), Expect = 3.45e-231
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0 

Query: 1   MADSSLHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIFPSKLPPRVPTIPP 60
           MADSSLHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIFPSKLPPRVPTIPP
Sbjct: 57  MADSSLHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIFPSKLPPRVPTIPP 116

Query: 61  LSSPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           LSSPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM
Sbjct: 117 LSSPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 176

Query: 121 NFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180
           NFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD
Sbjct: 177 NFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 236

Query: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLF 240
           QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLF
Sbjct: 237 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLF 296

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Sbjct: 297 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 356

Query: 301 LKSSEMKFREKLEPWEWE 318
           LKSSEMKFREKLEPWEWE
Sbjct: 357 LKSSEMKFREKLEPWEWE 374

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BLAST of MELO3C024579.jh1 vs. NCBI nr
Match: KAA0025223.1 (transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK07443.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 627 bits (1617), Expect = 1.62e-225
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0 

Query: 1   MADSSLHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIFPSKLPPRVPTIPP 60
           MADSSLHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIFPSKLPPRVPTIPP
Sbjct: 45  MADSSLHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIFPSKLPPRVPTIPP 104

Query: 61  LSSPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           LSSPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM
Sbjct: 105 LSSPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 164

Query: 121 NFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180
           NFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD
Sbjct: 165 NFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 224

Query: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLF 240
           QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLF
Sbjct: 225 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLF 284

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Sbjct: 285 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 344

Query: 301 LKSSEMKFREKLE 313
           LKSSEMKFREKLE
Sbjct: 345 LKSSEMKFREKLE 357

[Close]
BLAST of MELO3C024579.jh1 vs. NCBI nr
Match: KAE8647430.1 (hypothetical protein Csa_003511 [Cucumis sativus])

HSP 1 Score: 615 bits (1586), Expect = 9.95e-222
Identity = 307/318 (96.54%), Postives = 308/318 (96.86%), Query Frame = 0 

Query: 1   MADSSLHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIFPSKLPPRVPTIPP 60
           MADSSLHLLSNGGFI HSSPSPLFPSLPR RTLHFPVLSNSRTSFIFPSKLPPR P IPP
Sbjct: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP 60

Query: 61  LSSPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           LS PLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM
Sbjct: 61  LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120

Query: 121 NFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180
           NFT LE RRIVGMCPE+LTSRAS LIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD
Sbjct: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180

Query: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLF 240
           QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGF RRDALIMFRRFPQLF
Sbjct: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF 240

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Sbjct: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300

Query: 301 LKSSEMKFREKLEPWEWE 318
           LKSSEMKFREKLE WEWE
Sbjct: 301 LKSSEMKFREKLEQWEWE 318

[Close]
BLAST of MELO3C024579.jh1 vs. NCBI nr
Match: XP_038883667.1 (transcription termination factor MTEF1, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 604 bits (1558), Expect = 1.91e-217
Identity = 301/319 (94.36%), Postives = 308/319 (96.55%), Query Frame = 0 

Query: 1   MADSS-LHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIFPSKLPPRVPTIP 60
           MADSS LHLLSNGGFI HSSPSPLFPSLPR RTLHFPVLSNSR +F+FPSKLPPR PTI 
Sbjct: 1   MADSSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRIAFVFPSKLPPRNPTIL 60

Query: 61  PLSSPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTS 120
           PLS PLPP PPH DHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTS
Sbjct: 61  PLSPPLPPPPPHNDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTS 120

Query: 121 MNFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVK 180
           MNFTALEFRRIVGMCPE+LTS ASDL+PIFTFLLREARVDGSDIKRVINRRPRLLACSVK
Sbjct: 121 MNFTALEFRRIVGMCPEILTSPASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVK 180

Query: 181 DQLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQL 240
           D+LRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGF RRDALIMFRRFPQL
Sbjct: 181 DRLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQL 240

Query: 241 FCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPE 300
           FCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPE
Sbjct: 241 FCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPE 300

Query: 301 LLKSSEMKFREKLEPWEWE 318
           LLK+SEMKFR+KLEPWEWE
Sbjct: 301 LLKTSEMKFRQKLEPWEWE 319

[Close]
BLAST of MELO3C024579.jh1 vs. NCBI nr
Match: XP_038883666.1 (transcription termination factor MTEF1, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 590 bits (1521), Expect = 1.04e-211
Identity = 296/314 (94.27%), Postives = 303/314 (96.50%), Query Frame = 0 

Query: 1   MADSS-LHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIFPSKLPPRVPTIP 60
           MADSS LHLLSNGGFI HSSPSPLFPSLPR RTLHFPVLSNSR +F+FPSKLPPR PTI 
Sbjct: 1   MADSSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRIAFVFPSKLPPRNPTIL 60

Query: 61  PLSSPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTS 120
           PLS PLPP PPH DHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTS
Sbjct: 61  PLSPPLPPPPPHNDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTS 120

Query: 121 MNFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVK 180
           MNFTALEFRRIVGMCPE+LTS ASDL+PIFTFLLREARVDGSDIKRVINRRPRLLACSVK
Sbjct: 121 MNFTALEFRRIVGMCPEILTSPASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVK 180

Query: 181 DQLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQL 240
           D+LRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGF RRDALIMFRRFPQL
Sbjct: 181 DRLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQL 240

Query: 241 FCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPE 300
           FCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPE
Sbjct: 241 FCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPE 300

Query: 301 LLKSSEMKFREKLE 313
           LLK+SEMKFR+KLE
Sbjct: 301 LLKTSEMKFRQKLE 314

[Close]
BLAST of MELO3C024579.jh1 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 171.8 bits (434), Expect = 1.3e-41
Identity = 96/241 (39.83%), Postives = 143/241 (59.34%), Query Frame = 0 

Query: 78  FQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEV 137
           F+EK+++L  + +D    ++ +P + SA +  + S    ++S   +     RI+ M P++
Sbjct: 33  FREKLIYLQDLNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDL 92

Query: 138 LTS-RASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGI-- 197
           LTS   S+++P+  FL  E  +   DI + I+R PRLL  SV  QLRP L FL+++G   
Sbjct: 93  LTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVG 152

Query: 198 --SEVHKHTSLLSCSVEEKLIPRIEFF-ENLGFCRRDALIMFRRFPQLFCYSIKENLEPK 257
             +   ++T LL  +VE  LIP+IE+  E LGF R +   M  R P L  YS+  NL PK
Sbjct: 153 RDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPK 212

Query: 258 LNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREK 313
           + +F+ EM  ++KELK FP YFSFSLE +IKPRH+   E G+  PL E+LK S+ +F   
Sbjct: 213 VEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQFNHW 272

[Close]
BLAST of MELO3C024579.jh1 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.2e-23
Identity = 70/234 (29.91%), Postives = 121/234 (51.71%), Query Frame = 0 

Query: 84  FLDSIGI---DFLSVIKDHPPVASASLPD-IRSAVDFMTSMNFTALEFRRIVGMCPEVLT 143
           FL  +GI   D  +++   P +   SL D ++  + F+ ++     ++ +I+   P +LT
Sbjct: 238 FLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILT 297

Query: 144 SRASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISE--- 203
                L     FL +    +   I R++ R P +++ SV+D+LRPT+ + +S+ +     
Sbjct: 298 YSRQKLTSTVEFLSQTGLTE-EQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLNVDVAVL 357

Query: 204 VHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFV 263
           +H+       S+E  L P  EFF   GF   +  IM  R+  L+ +S+KEN+ PK +YF 
Sbjct: 358 LHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYFQ 417

Query: 264 VEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFRE 311
             M     EL +FP +F +SL+ RIKPR++     GV   L ++L  S ++F +
Sbjct: 418 T-MDYPKSELVKFPQFFGYSLQERIKPRYELVQRSGVRLLLNQVLSLSGIEFEK 469

[Close]
BLAST of MELO3C024579.jh1 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 4.2e-21
Identity = 67/244 (27.46%), Postives = 123/244 (50.41%), Query Frame = 0 

Query: 79  QEKMLFLDSIGI---DFLSVIKDHPPVASASLP-DIRSAVDFMTSMNFTALEFRRIVGMC 138
           QE++ +L S+G+   D   ++   P +   ++  ++++ + F+  +     +  +IV   
Sbjct: 220 QERLDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAAT 279

Query: 139 PEVLT-SRASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFL-QSI 198
           P + + S  + L P   +L+ E  +  +D+ +V+   P++L   +         FL + +
Sbjct: 280 PSLFSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKEL 339

Query: 199 G------ISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKE 258
           G      +  V KH  LL  S+++  +PRI F  ++G C  D L +     Q+   S+++
Sbjct: 340 GAPRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLED 399

Query: 259 NLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVE-----KGVCFPLPELL 306
           NL+PK  Y V E+  E+  L ++P Y S SL+ RI+PRH+  VE     KG  FPL  L+
Sbjct: 400 NLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQRIRPRHRFLVELKKVRKGP-FPLSSLV 459

[Close]
BLAST of MELO3C024579.jh1 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.2e-15
Identity = 60/227 (26.43%), Postives = 109/227 (48.02%), Query Frame = 0 

Query: 94  SVIKDHPPVASASLPD-IRSAVDFMTSMNFTALEFRRIVGMCPEVLT-SRASDLIPIFTF 153
           S I   PP+ S S+ + +   + F  ++     +  +++   P +++ S  + L  I +F
Sbjct: 97  SAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSF 156

Query: 154 LLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQ-SIGISE------VHKHTSLL 213
           L          I +V+ + P L+  SV  +LRPT  FL+ S+G+SE      V     LL
Sbjct: 157 LASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLL 216

Query: 214 SCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELK 273
              V + L P  ++ +  GF       M   +PQ+   S+K +L+P++ + V  MGR + 
Sbjct: 217 CRDVNKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMD 276

Query: 274 ELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREK 312
           E+  +P +F   L+ +++ R +   +  +   L E+L  +  KF EK
Sbjct: 277 EVASYPEFFHHGLKKKVESRFKLVKKNNIDCSLREMLDCNTKKFHEK 323

[Close]
BLAST of MELO3C024579.jh1 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.0e-15
Identity = 55/167 (32.93%), Postives = 88/167 (52.69%), Query Frame = 0 

Query: 153 LREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQS-IGISE------VHKHTSLLS 212
           L+E  +    I  ++ + P LL  S+  ++RP + FL +  G+++      +    +LL 
Sbjct: 431 LQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLG 490

Query: 213 CSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKE 272
           CS+  KL P + ++ +LG        M   FP L  Y++ +NL PK  Y    M R L++
Sbjct: 491 CSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNV-DNLRPKYRYLRRTMIRPLQD 550

Query: 273 LKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKL 313
           L EFP +FS+SLE RI PRH   VE  V F L  +L  ++ +F  ++
Sbjct: 551 LIEFPRFFSYSLERRIIPRHTIMVENRVNFKLRYMLACTDEEFERRV 596

[Close]
BLAST of MELO3C024579.jh1 vs. ExPASy TrEMBL
Match: A0A1S4E3U8 (transcription termination factor MTEF1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC107991918 PE=3 SV=1)

HSP 1 Score: 641 bits (1654), Expect = 1.67e-231
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0 

Query: 1   MADSSLHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIFPSKLPPRVPTIPP 60
           MADSSLHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIFPSKLPPRVPTIPP
Sbjct: 57  MADSSLHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIFPSKLPPRVPTIPP 116

Query: 61  LSSPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           LSSPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM
Sbjct: 117 LSSPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 176

Query: 121 NFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180
           NFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD
Sbjct: 177 NFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 236

Query: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLF 240
           QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLF
Sbjct: 237 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLF 296

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Sbjct: 297 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 356

Query: 301 LKSSEMKFREKLEPWEWE 318
           LKSSEMKFREKLEPWEWE
Sbjct: 357 LKSSEMKFREKLEPWEWE 374

[Close]
BLAST of MELO3C024579.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SKM3 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001730 PE=3 SV=1)

HSP 1 Score: 627 bits (1617), Expect = 7.83e-226
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0 

Query: 1   MADSSLHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIFPSKLPPRVPTIPP 60
           MADSSLHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIFPSKLPPRVPTIPP
Sbjct: 45  MADSSLHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIFPSKLPPRVPTIPP 104

Query: 61  LSSPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           LSSPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM
Sbjct: 105 LSSPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 164

Query: 121 NFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180
           NFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD
Sbjct: 165 NFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 224

Query: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLF 240
           QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLF
Sbjct: 225 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLF 284

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Sbjct: 285 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 344

Query: 301 LKSSEMKFREKLE 313
           LKSSEMKFREKLE
Sbjct: 345 LKSSEMKFREKLE 357

[Close]
BLAST of MELO3C024579.jh1 vs. ExPASy TrEMBL
Match: A0A6J1IAF5 (transcription termination factor MTEF1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111471129 PE=3 SV=1)

HSP 1 Score: 555 bits (1431), Expect = 2.09e-198
Identity = 273/316 (86.39%), Postives = 294/316 (93.04%), Query Frame = 0 

Query: 1   MADSSLHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIFPSKLPPRVPTIPP 60
           M D++LHLLSNGGF+ HSSPS LFPSL R RTL FP++SN++T+FI PSKLP R P IPP
Sbjct: 4   MQDTALHLLSNGGFLHHSSPSSLFPSLSRSRTLQFPIISNAKTAFILPSKLPSRAPDIPP 63

Query: 61  LSSPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           LS PLPP P H+   S+FQEKMLFLDSIGIDFLSVIKDHPPVA+ASL DIRSAVDFMTSM
Sbjct: 64  LSPPLPPPPSHSGSRSEFQEKMLFLDSIGIDFLSVIKDHPPVATASLADIRSAVDFMTSM 123

Query: 121 NFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180
           NFTA+EFRRIVGMCPE+LTSR SD++P+FTFLLREARVDGSDIKRVINRRPRLLACSVK+
Sbjct: 124 NFTAVEFRRIVGMCPEILTSRVSDIVPVFTFLLREARVDGSDIKRVINRRPRLLACSVKN 183

Query: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLF 240
           +LRPT+YFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGF RRDA+IMFRRFPQLF
Sbjct: 184 RLRPTMYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLF 243

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           C SIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQ CVEKGVCFPLP L
Sbjct: 244 CCSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQICVEKGVCFPLPVL 303

Query: 301 LKSSEMKFREKLEPWE 316
           LK+SEMKFREKLEPWE
Sbjct: 304 LKTSEMKFREKLEPWE 319

[Close]
BLAST of MELO3C024579.jh1 vs. ExPASy TrEMBL
Match: A0A6J1HHJ6 (transcription termination factor MTEF1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111463541 PE=3 SV=1)

HSP 1 Score: 546 bits (1406), Expect = 1.30e-194
Identity = 271/316 (85.76%), Postives = 291/316 (92.09%), Query Frame = 0 

Query: 1   MADSSLHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIFPSKLPPRVPTIPP 60
           M D++LHLLSNGGF+ HSSPS LFPSL R RTL FP + N++ +FI PSKLP R P IPP
Sbjct: 4   MQDTALHLLSNGGFLHHSSPSSLFPSLSRSRTLQFPTI-NAKIAFILPSKLPSRAPDIPP 63

Query: 61  LSSPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           LS PLPP P H+   S+FQEKMLFLDSIGIDFLSVIKDHPPVA+ASL DIRSAVDFMTSM
Sbjct: 64  LSPPLPPPPSHSGSRSEFQEKMLFLDSIGIDFLSVIKDHPPVATASLADIRSAVDFMTSM 123

Query: 121 NFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180
           NFTA+EFRRIVGMCPE+LTSR SD++P+FTFLLREARVDGSDIKRVINRRPRLLACSVK+
Sbjct: 124 NFTAVEFRRIVGMCPEILTSRVSDIVPVFTFLLREARVDGSDIKRVINRRPRLLACSVKN 183

Query: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLF 240
           +LRPT+YFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGF RRDA+IMFRRFPQLF
Sbjct: 184 RLRPTMYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLF 243

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           C SIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQ CVEKGVCFPLP L
Sbjct: 244 CCSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQICVEKGVCFPLPVL 303

Query: 301 LKSSEMKFREKLEPWE 316
           LK+SEMKFREKLEPWE
Sbjct: 304 LKTSEMKFREKLEPWE 318

[Close]
BLAST of MELO3C024579.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KKL6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454440 PE=3 SV=1)

HSP 1 Score: 501 bits (1289), Expect = 4.14e-177
Identity = 262/313 (83.71%), Postives = 263/313 (84.03%), Query Frame = 0 

Query: 1   MADSSLHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIFPSKLPPRVPTIPP 60
           MADSSLHLLSNGGFI HSSPSPLFPSLPR RTLHFPVLSNSRTSFIFPSKLPPR P IPP
Sbjct: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP 60

Query: 61  LSSPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           LS PLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM
Sbjct: 61  LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120

Query: 121 NFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180
           NFT LE RRIVGMCPE+LTSRAS LIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD
Sbjct: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180

Query: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLF 240
           QLRPTLYFLQSIGISE                                          LF
Sbjct: 181 QLRPTLYFLQSIGISE------------------------------------------LF 240

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Sbjct: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 271

Query: 301 LKSSEMKFREKLE 313
           LKSSEMKFREKLE
Sbjct: 301 LKSSEMKFREKLE 271

[Close]
BLAST of MELO3C024579.jh1 vs. TAIR 10
Match: AT2G36000.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 317.0 bits (811), Expect = 1.7e-86
Identity = 174/311 (55.95%), Postives = 216/311 (69.45%), Query Frame = 0 

Query: 14  FIRHSSPS--PLFPSLPRFRTLHFPVLS-----NSRTSFIFPSKLPPRVPTIPPLSSPLP 73
           F+  S PS    FPSL R R  +FP LS     +S +S  F S      P IP LSS   
Sbjct: 8   FLSSSLPSLHHNFPSLSRLRFNNFPALSFKPNTSSSSSSFFKS------PDIPSLSSTTT 67

Query: 74  PSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTS--MNFTA 133
            +       S   EK+++LDS+GIDFL++I  HPP+ S +L  + S VD+MT+  +NFT 
Sbjct: 68  TTTTTETLESSIHEKLIYLDSLGIDFLTLINRHPPLLSTALSAVESVVDYMTTPPINFTL 127

Query: 134 LEFRRIVGMCPEVLTS-RASDLIPIFTFLLREARVDG-SDIKRVINRRPRLLACSVKDQL 193
            +FRR+V MCPE+LTS   S  IP+ TFLLRE  VD   D+++ + RRPRLLACSV  QL
Sbjct: 128 QDFRRLVSMCPELLTSPLTSHTIPVITFLLREVGVDSIFDLRQALRRRPRLLACSVDHQL 187

Query: 194 RPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCY 253
           RPTLYFLQ IGI + HKHT LLSCSV+ KL+PRI++FE LGF RR A  MF+RFPQLF Y
Sbjct: 188 RPTLYFLQRIGILDPHKHTYLLSCSVDNKLVPRIDYFEKLGFSRRSATAMFKRFPQLFNY 247

Query: 254 SIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLK 313
           SI EN EPKL Y +VEMGR+++E+ EFP YFSFSLENRIKPRH++C  KGV FPLP +LK
Sbjct: 248 SIAENYEPKLKYLMVEMGRDVREVLEFPQYFSFSLENRIKPRHEACAAKGVRFPLPVMLK 307

[Close]
BLAST of MELO3C024579.jh1 vs. TAIR 10
Match: AT2G36000.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 317.0 bits (811), Expect = 1.7e-86
Identity = 174/311 (55.95%), Postives = 216/311 (69.45%), Query Frame = 0 

Query: 14  FIRHSSPS--PLFPSLPRFRTLHFPVLS-----NSRTSFIFPSKLPPRVPTIPPLSSPLP 73
           F+  S PS    FPSL R R  +FP LS     +S +S  F S      P IP LSS   
Sbjct: 8   FLSSSLPSLHHNFPSLSRLRFNNFPALSFKPNTSSSSSSFFKS------PDIPSLSSTTT 67

Query: 74  PSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTS--MNFTA 133
            +       S   EK+++LDS+GIDFL++I  HPP+ S +L  + S VD+MT+  +NFT 
Sbjct: 68  TTTTTETLESSIHEKLIYLDSLGIDFLTLINRHPPLLSTALSAVESVVDYMTTPPINFTL 127

Query: 134 LEFRRIVGMCPEVLTS-RASDLIPIFTFLLREARVDG-SDIKRVINRRPRLLACSVKDQL 193
            +FRR+V MCPE+LTS   S  IP+ TFLLRE  VD   D+++ + RRPRLLACSV  QL
Sbjct: 128 QDFRRLVSMCPELLTSPLTSHTIPVITFLLREVGVDSIFDLRQALRRRPRLLACSVDHQL 187

Query: 194 RPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCY 253
           RPTLYFLQ IGI + HKHT LLSCSV+ KL+PRI++FE LGF RR A  MF+RFPQLF Y
Sbjct: 188 RPTLYFLQRIGILDPHKHTYLLSCSVDNKLVPRIDYFEKLGFSRRSATAMFKRFPQLFNY 247

Query: 254 SIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLK 313
           SI EN EPKL Y +VEMGR+++E+ EFP YFSFSLENRIKPRH++C  KGV FPLP +LK
Sbjct: 248 SIAENYEPKLKYLMVEMGRDVREVLEFPQYFSFSLENRIKPRHEACAAKGVRFPLPVMLK 307

[Close]
BLAST of MELO3C024579.jh1 vs. TAIR 10
Match: AT2G34620.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 193.7 bits (491), Expect = 2.2e-49
Identity = 102/239 (42.68%), Postives = 156/239 (65.27%), Query Frame = 0 

Query: 79  QEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEVL 138
           +EK+L L+ +GID    +  +P + SA L  I+S + F+ S      +  RI+GMCP++L
Sbjct: 56  KEKILCLELMGIDSGKALSLNPCLCSAPLDSIQSVLHFLQSKGIYPNDLPRILGMCPKIL 115

Query: 139 TSRA-SDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEV 198
           TS   ++L P+F FL  +  V  +  +RVI + PRLL  SV+DQL+P L++LQ +G+ ++
Sbjct: 116 TSDVRTELYPVFMFLSNDLHVPENAFRRVIKKCPRLLISSVEDQLKPALFYLQRLGLKDL 175

Query: 199 ----HKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLN 258
               ++   LL  SVE  LIP++ F E++GF R +A+ M  R P LF +SI+ N +PKL+
Sbjct: 176 EALAYQDPILLVSSVEHTLIPKLRFLESIGFSRPEAIGMILRCPALFTFSIENNFKPKLD 235

Query: 259 YFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKL 313
           YF+ E+  +L+ LKEFP YF+FSLE RIKPRH   +E+G+  PL  +LKS++ +F + L
Sbjct: 236 YFMSEIKGKLENLKEFPQYFAFSLEKRIKPRHLESMERGLELPLSLMLKSTDEEFEQLL 294

[Close]
BLAST of MELO3C024579.jh1 vs. TAIR 10
Match: AT2G03050.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 171.8 bits (434), Expect = 8.9e-43
Identity = 96/241 (39.83%), Postives = 143/241 (59.34%), Query Frame = 0 

Query: 78  FQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEV 137
           F+EK+++L  + +D    ++ +P + SA +  + S    ++S   +     RI+ M P++
Sbjct: 32  FREKLIYLQDLNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDL 91

Query: 138 LTS-RASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGI-- 197
           LTS   S+++P+  FL  E  +   DI + I+R PRLL  SV  QLRP L FL+++G   
Sbjct: 92  LTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVG 151

Query: 198 --SEVHKHTSLLSCSVEEKLIPRIEFF-ENLGFCRRDALIMFRRFPQLFCYSIKENLEPK 257
             +   ++T LL  +VE  LIP+IE+  E LGF R +   M  R P L  YS+  NL PK
Sbjct: 152 RDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPK 211

Query: 258 LNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREK 313
           + +F+ EM  ++KELK FP YFSFSLE +IKPRH+   E G+  PL E+LK S+ +F   
Sbjct: 212 VEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQFNHW 271

[Close]
BLAST of MELO3C024579.jh1 vs. TAIR 10
Match: AT3G18870.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 134.4 bits (337), Expect = 1.6e-31
Identity = 91/271 (33.58%), Postives = 146/271 (53.87%), Query Frame = 0 

Query: 58  IPPLSS-PLPPSPP-----HTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVA--SASLPD 117
           + PLSS   PPSP      +    +  +E +  L S+GI     +  +P +A  +  L  
Sbjct: 10  LQPLSSFSSPPSPSSSKPLYLKFQTSHRENLRHLSSLGI-----VPQNPRLAPPANDLSV 69

Query: 118 IRSAVDFMTSMNFTALEFRRIVGMCPEVL--TSRASDLIPIFTFLLREARVDGSDIKRVI 177
           I SAV+ + S   +  +F R+V +CP++   T   S L P+F FL  E      + + +I
Sbjct: 70  ILSAVNLLKSKGISDEDFPRLVFLCPQLFSPTFDISKLDPVFDFLTGELGASAEESRGLI 129

Query: 178 NRRPRLLACSVKDQLRPTLYFLQSIGISEVHK----HTSLLSCSVEEKLIPRIEFFENLG 237
              P +L   V+  LRPTL +L+ +G+  +++    +  +L+  V EKL  ++ F +++G
Sbjct: 130 VNCPNILFSDVEYCLRPTLVYLKELGVRNLNRASKTNAHVLNTRV-EKLRAKMRFLKSIG 189

Query: 238 FCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKP 297
           F   +A  +  R P +F YS+++NL PK  + V +M REL+ELK+FP YF+FSL  RI+P
Sbjct: 190 FEHEEAARVCGRIPAIFGYSVEDNLRPKFEFLVYDMERELEELKKFPQYFAFSLGKRIRP 249

Query: 298 RHQSCVEKGVCFPLPELLKSSEMKFREKLEP 315
           RH    +K V   L  +L   + KF  K +P
Sbjct: 250 RHWHLKKKNVRVSLSRMLMWGDQKFYSKWKP 274

The following BLAST results are available for this feature:
BLAST of MELO3C024579.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016902903.13.45e-231100.00PREDICTED: transcription termination factor MTEF1, chloroplastic [Cucumis melo][more]
KAA0025223.11.62e-225100.00transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK07443.1 tr... [more]
KAE8647430.19.95e-22296.54hypothetical protein Csa_003511 [Cucumis sativus][more]
XP_038883667.11.91e-21794.36transcription termination factor MTEF1, chloroplastic isoform X2 [Benincasa hisp... [more]
XP_038883666.11.04e-21194.27transcription termination factor MTEF1, chloroplastic isoform X1 [Benincasa hisp... [more]
BLAST of MELO3C024579.jh1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q84X531.3e-4139.83Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX... [more]
F4JVI31.2e-2329.91Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O... [more]
Q9FM804.2e-2127.46Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O... [more]
Q9SZL61.2e-1526.43Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop... [more]
F4IHL32.0e-1532.93Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O... [more]
BLAST of MELO3C024579.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S4E3U81.67e-231100.00transcription termination factor MTEF1, chloroplastic OS=Cucumis melo OX=3656 GN... [more]
A0A5A7SKM37.83e-226100.00Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A6J1IAF52.09e-19886.39transcription termination factor MTEF1, chloroplastic OS=Cucurbita maxima OX=366... [more]
A0A6J1HHJ61.30e-19485.76transcription termination factor MTEF1, chloroplastic OS=Cucurbita moschata OX=3... [more]
A0A0A0KKL64.14e-17783.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454440 PE=3 SV=1[more]
BLAST of MELO3C024579.jh1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G36000.11.7e-8655.95Mitochondrial transcription termination factor family protein [more]
AT2G36000.21.7e-8655.95Mitochondrial transcription termination factor family protein [more]
AT2G34620.12.2e-4942.68Mitochondrial transcription termination factor family protein [more]
AT2G03050.18.9e-4339.83Mitochondrial transcription termination factor family protein [more]
AT3G18870.11.6e-3133.58Mitochondrial transcription termination factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 230..262
e-value: 2.0E-5
score: 34.0
coord: 263..294
e-value: 0.0022
score: 27.2
coord: 196..225
e-value: 0.042
score: 23.0
coord: 93..123
e-value: 240.0
score: 8.7
coord: 128..159
e-value: 11.0
score: 15.0
coord: 164..195
e-value: 3.1E-5
score: 33.4
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 153..308
e-value: 7.2E-34
score: 117.1
IPR003690Transcription termination factor, mitochondrial/chloroplasticPANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 64..313
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10Transcription termination factor 3, mitochondrialcoord: 141..317
e-value: 2.5E-37
score: 130.5
NoneNo IPR availablePANTHERPTHR13068:SF46OS03G0360600 PROTEINcoord: 64..313

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C024579.jh1.t1MELO3C024579.jh1.t1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003690 double-stranded DNA binding