MELO3C024564.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C024564.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionCasparian strip membrane protein 1
Locationchr08: 8138043 .. 8148662 (-)
RNA-Seq ExpressionMELO3C024564.jh1
SyntenyMELO3C024564.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTTCAATCAATCCTCAACACATTTCTCTCAATCCCCATTACGCTTCCTCACCTTCTTAATTCTCTCTCAACATTCCAAAAATGAAGACCGGCGAATCCACCGCCATTGACATTGCCCCCGAGACCAACAACAGTGGCCCAATTGGGAAGAAGAAGAGCACGACCCCGTTGCTGGCCGCCCCGGTGCCGGACAGGGGAACCCACCGGATGAAACGTGGGCTTGCGATATTTGACTTCGTTCTGAGAATCGGCGTTCTTGCGTCGGCGTTGGCGGCCGCCGCCGCTATGGGTACTAGTGAACAAACGTTGCCGTTTTTTACTCAATTCTTCCAGTTCGAGGCCAGCTACGATGATTTGCCTACTTTCCAGTTCGGTTATCTCCTTTTTCTTTTAAGCATATGATATAAAATTCTCCATTCTTATTTTAAAAAATAAAATAGCTCGATGAAATTTTACTTATAACGGCTACATACATGGATAGATTACTATCATTTATTAGTTAGTGTAATAAACTATAGTAATTTATGAGTGTCTAGTACAGTTAGATAAATGTGTTTTTCATTCGATACTATTGTCCTAATTGAATTGAAATTTTCAGGTTTTTTGTGGTGGCAATGGCCGTAGTTGCGGGATATGTGGTTTTGTCAATTCCATTCTCAATTGTTTGTATTATTCGTCCCCATGCTGCTGGGCCTCGCGTTCTTTTGTTGATTCTAGACTCGGTATGTAATGGTTTAATTTTTATCATAGATTTTAAATAGATATTTTTAAATTTATAATAATTTCTCAATTTTAAAACTAAAGTCATTGGTTTAACTTTAAACTTTTATTAATTCATGTGTCGGTGAAAATAAAATTGGTTTAAAACTTGATCTACATCAAGTTTTTAGATTTTGCAAAACTATCTAATCAGAATTTGTCTCTTCCTACATCTTTTGTAAATATTTTACAGATGATATGCATAAAGATAAGTGTTCACACGAGATTTCAGGAGAAATTTAATTCGTGGAATCGAACTTTGTATTGATTTATGTATTGCGGATACAATCTCTAATATTTACTCCTTTGATTCTTTCTCTCGGATACAAAAAGTAAAATTTAAAACTTCGTGATCTTCAATCTTCAAGAAGTTGTAACTACAAGTCAATTCAAGCTTCAATCTTCTGGAATTCAAGGAAAGTTTGATCTTCCAAGTCTTCGATCTTTCAGAAGGTTGATTTTGAGGTTGATGATAACTTGCACGTCTTGAGAGTCTTCAGAAGTTTTTGTCTTCAATTCTTCAGAGCTTCGATTCTTCTCTTCCATCCAAGGTCCTCCCAAGATGAATGAGAAGGTCTCTATTTATAGAGAATCTCGATGGGCTTTAGGTGGGCTTGGGCCCATTTGCTTGTTGGGCGGGCTTAGGCCTGGGCCCATCTGCTTGTTGGGTTTGGGCTTGGACCCATCTGCTTGTTGGGCTTGAGCTTGGACCTGTTTTCTTGACAGGCTTAGGCTCGGACCCATTTGCTCGATCGGTTTGGGCTTGGATCCATTTGCTTGGTGGGCTCGAACTCGACCCACTTATTTGCGCAAGCTCGGGTCCATTATTTCTTTGGCCCAATTTTTTTTAAGGCCTTGAACTAGGTTGAGTATGAGAAAACTTGACTACCTAAATCCAATCAAATTATAATTATCTCAATTTTGCTGTGATGACGTGGCGTGATTTAATTGGTCAAAATTTCCTGTTCAACAAATGCCCCCTTTTCGAGATTTGTACACGTGTATGGGTGGATGAATCTCGAAAATGATAAGCTGAAACAAAAAATACAAGTGATCTTGTTCTTGACTTTTGCTCCAGTTAATATGTCGAATTAATCAAACTATGCGTTTGGACATAAGTTTGATTAAAAATGAAGTTTTGATACAGCCCAATATCAAATTTGTAGTGAATTTTGATTTTAATTCACAATTTATTTATTTATTTTGGAATATAGCCAAAACTTGAATGAAATTGAACTTTTTCTTTTTTACCAATGAATTTAATGGAAGAATTGAGACTTAACATTTATAAAATTGGAATATTGCCAATTCATCAAAATATGAATTTAAGTCAAAGTTTTTTTTTTTTTTTTTTTTGCATATTCTCTTAATTTGAATTTTTAGCGAATTGGGATAAAATTTGGAAAGTTTGCCATTTTTTTTTTTTACTTCATTTCAAATCCATTTATGATTTGGGATAAAATTTAAACATTTTTTTTTAATAGATGAGAAAAGAAAATCGGGGGATTTTTTTTCTCCAAGATTTGAGGTTTTTTTTTTTTAAGGTTTAATTATGAAGAGGATATGGGAGGGATAAGACTTGAAATTTTTTTAATGCTTTTAAAAAATAGAACGTCATTTTCTTTTCTTAATTAATCTTAAAAAAAAAACAATAGAGGAGATTTTTTTTTTTATTATTTAATAAAGGAAAAGAATAGAGGAGGTTAGGAATTCTCTCCTATAATCTCACCTAATCTAACTATTTGTTAAGAAGATTTTTATTTAGTTTGTTGAGAAAAGATTTGATTTGCTACCTTCCATCCTTTATAAATAGGGAACAAGCTTGCAAACAAAATTCACACCAATTCATCTTCTCTAACTTTTTTTTCATTGCATATGTGTTTGATCCTCCAATTCTTTTTCTTTATTTGGGAGAGAAAAAAAAATCCGATGTGCTTCTTTTTTTTTCATGATTTGGAAGAAGAGGTGATAGATGAAAAAAAAAACAGATTTTTTTTTTTCATTCAATTGGTAAGGAAGAGCACAGATGAAGAAGAAAAAGGAGACAGAGAAGAGAGAAAAAAAACCCTTTTTTTTTTTTAAATTTTGGAGAGATTTCTTTTCTTTTCCTTTTCTTTTTTTTTTCCTTTTCTTATTTCCTTTTTTTTTTCTTCTATTTCTTTTCTTTTCTTTTCTATATATATATATATATTCTTTTTCATTTTTGTTTTTTTCTTACTTTTTTTTTTCAATTACTTTTTCCCTCTTTTTTTTCACGTTTTCATCTTTTTTTTTTCAATTTTTTCAATTTTTTTCTTTTTTATTATCTTTTCTTTCTTTCTTTTTTTTTCTACAATTTTGTTAAAAAGAAAATTCAACCATTTTGTCCCCATTTTTTTTCCAAACTTTTTCTTTTGCAATTTTTTTTTTACCCCAATGTTTTTTAACAATTTTTTTTTTACTTACTTACCCTTCTTTTTCATAGGAGTGAAGCTAAACCTTTTTTTTTTTCCACAAATTCTTTTTTTTCATACGAGTGAAGTGTGTAGATGATGCGCTTGAACAAATTTGAGGATCGAGATGCCGTTTGAACAAATTTGAGGATGGATTGCCGCTTGAACAAATACGACGATGATTGTTCTATCGACTACACCGCATGGAGACGACGACGATTGTTCTATCGACTACACCGCATGGAGACGACGACGATTGTTCTATCGACTACACCGCATGGAGACGGCGATGATTGTTCTATAGACTACACCGCATGGAGACGACGATGATTGTTCTATAGACGATGATGATTTATCGAGTGTGCCGCATTGAAGATGGAGTTGATGATGATTTCGCTGCGCTGCCTTGAAGATGAAGATGATGATGGTTTCGCTGCACTGCTTTGAAGATGAAGATGATGATGAAGATCCTCTCGGCAACATATGTGAGATGAAGATGATGATGAAGATCCTCTCGGCTACAACATATGTGAGATGAAGATGATGATGAAGATCCTCTCGACTGCAACATTTGTGAGATGAAGATGATGATGAAGATCCTCTCGGCTGCAACATATGTGAGATGAAGATGATGATGAAGATCCTCTCGGCTGCAACATATGTGAGATGAAGATGATGATGAAGATCCTCTCGGCTGCAACATATGTGAGATGAAGATGATGATGAAGATCCTCTCGACTGCAACATATGTGAGATGAAGATGATGATGAAGATCCTCTCGGCTGCAACATATGTGAGATGAAGATGATGATGAAGATCCTCTCGACTGCAACATATGTGAGATGAAGATGATGATGAAGATCCTCTCGGCTGCAACATTTGTGAGATGAAGATGATGATGAAGATCCTCTCGGCTGCAACATATGTGAGATGAAGATGATGATGAAGATCCTCTCGGCTGCAACATATGTGAGATGAAGATGATGATGAAGATCCTCTACGCAACATATGTGAGATGAAGATGATGATGAAGATCCTCTCGGCTGCAACATTTGTGAGATGAAGATGATGATGAAGATCCTCTCAGCTGCAACATATGTGAGAAGATGAACATGCTGATGAAGATCCTCTCGACTGCAACATATGTGAGAAGATGAAAATGATGGTGAAGATCCTCTCGGCTACAACATATGTGAGAAGATGAAAATGAGATGATGATCCTCTCGACTGCAACATATGTGAGAAGATGAAAATGATGATGATGATCCTCTCGGCTGCAACATATATGAGAAGATGAAGATGATGATCCTCTCGGCTGCAACATATGTGAGAAGATGAAGATGATGATCCTCTCGGCTGCAACATATGTGAGAAGATGAAGATGATGATTTTCTCGGCTGCAACATTTGTGAGAAGATGAAGTTGATGATTTCCTCCGCTACAACACATTGAAGATGAAGATGATGATCCTCTCTGTTGCAACACATTGAAGATGATGATGATGGTGAAGATCCTCCCAGCTGCAACATATTTGAAGGGACGACCTTCTCGACAACAACATATTTGAGACGACGACATCCTCGGCTGCAATATATATGAGACGACGACTTTCTCGCCTACAATATACTTGAGACAAAAATCTTTTTGGCTGCAACATATTTGAGACGACGATCTTCTCGGTTGTAACATATTTGAGACGATGATCTTCTCTGCTTCAACATATTTAAGAACGGCAATCTTCTGAGCTGCAACATATTTTAGGGGACGACCTTCTCGACGATAATATATTTGAGACGACGACATCCTCGACTGCAACATATATGAGACGACGACCTTTTTGGCTGCAACGTATTTGAGACGACGATCTTCTCGGTTGTAACATATTTGAGACGATGATCTTCTCTGCTTCAACATATTTAAGAACGGCAATCTTCTGAGCTGCAACATATTTTAGGGGACGACCTTCTCGACGATAATATATTTGAGACGACGACATCCTCGGCTGCAACATATATGAGACGACGACCTTTTTGGCTGCAACATATTTGAGACGACGATCTTCTCGGTTGTAATATATTTGAGAAGATGATCTTCTCTGCTACAACATATTTAAGAACGATAATCTTCTCAGCTGCAACATATTTGAGACGATGATCTTCTTGGTTGTAACATATTTGAGACGACGATCTTCTCAGCTGCAACATATTTAAGAACGACAATCTTCTTAGCTGCAACATATTTGAGGGGACAACCTCCTCGGCGACAACATATTTGAGACAACGACATCCTCGGCTGCAATATATATGAGATGACGACTTTCTGGGTTGCACGAGACAACGAAATTCTCAGCTACAATATACTTGAGATAAAAATCTTTTTGGCTGCAACATATTTGAGATGATGAAGATGAAGATCCTCTCGGCTGCAACACATGGGAGAAGATGAAGATGAAGATCCTCTTGGGCACAACACATGGAAAGATCCTTGTCTGCAACATATCAAAGAGGAGTAGAGTTCGCTGGTCAACATTTTGGAGAAGAGGCGAAACCGCACCTTACGAAGGTAAACAATTAAACATCTCTGTTGTCACAAAAGAGGCCACAGAGGCGCTAGCTACGGTTCAAAAGAGCCTGAACGCTACACGCGAAGAATTTAAGAACTTCAAGTGGAGGCTTTAACTTTGCCCCCTTTGCCCCCATTCTTTTTTTTCTTTAGTTGTATTCTTGTAAATACAAGAATTTGTTGAATGGTGATGAGAATGTTCTTATTCTGGTGTGACTGCTCCTAAATTTCATTTTATACTGTTTACGCATCATTTACTATGCGCTTACATCATCACAATGAAGAATAATATTTTTTTTTTACGTGCGACTGAACTTAAAGTGAATTTTAAGCTGCCTACGTACCCTTTTTATAACATAGGGATCAAGTCATAACGTAGTTCAATTTTTTTTTTCTCCGCCATTCACCTTTTAAGCTATTGTGGGCTAGAAGCACCATGCAGTTTAAGCTCTTGCGATAAGGAGCTTTGCATATTTAACAGCTTTTATTTTCAACAAGAATTTGTTCATCTCCTTCGTTTGTAGGATTGGTGAAGATAATAAATCTTGGTTTCACAGTCAAGGAACATTCTGTATTTATGTCAACAAACAACTTCCTCTTCATGCGTGACGGGGCACAACTGTGAATCTTATCGTCGTCATTTTCTTCACGAAATGGTTTTGCCTTCGAAGATTTCATCTCTCTTTGTTGTTGATCATTTGTCATCTTTAGACGATCAAAAGCAGATGTTGAAGGTCGATCTTTCTTCAATGTGGAGATACTCAGCCTTTTGAAAGTTGAAGTTCGAGTGTAAATAAATGTTGGACATTGGTTTTCCTCTTCTTTCGTGGCCATACTTAATCTTTGAAAGACTGAAGATCGAGTAGTTGAAGGCTTGATACGATCAAAGACAGAGGTCCTTTGATTAATTTCATTTGAATTGTTGACTTCTTTAGAAGATTCATAATTGTTGTCGACTTCTACTATGCTGGCAGCATGACATGCAGTGACTTCAAGTATTTCTTCTGGATGATCCTCAAGGAAACTTCTTGGGAGGAATTCTGCCAAAGTTATCGATCGTCGAAGTTGGAGGAAATCCTCATCTTTTCCTTTTATGGGCTTAGGATTCCACATCTTCTTGTTCCTTCTTCCTTTCTTTTTATAAGAGATGCTTCCTTTTGCATACTTTTGATGGAATCGCGACTCCTTTTGAATGGAATTTGGTTGTCTCCCTTTTTGACGAGTGACTGTTATCCATCCTTCGCCATCATCTTTACCATGCGCTTCTTTATTTTGGGAGTTTATCGCCACGATCCTTTGTTGGAATAGAACAAGTATAGGTGCAGAAGTCCCAAATTAAATCAAGCTTTTTCTTTGATCATCAAGTTGTGTTAATGGCGGAACATTTGAAGTCATCTCGATCGCAACATGATTCGTCTGAGCTACTTCATCAATATCTAGCTCGATCTTCTTTTCACGAGCCAACTTTAGAATTAGCTCTTTCAACACGAAACACTTTTCAACAGGGTGACTAATGACCCGATGATACTTGCAGTAGTTAGGATCATCTACTTTTCCTGCTTGTTCTGGTCGTTTGCATTCTGGCAGTTGAATAAGTTGGTTCTCTAGCAACTGCTCTAACATGTCTGCAACATCAGAGTCAGGAAATGGATAAACTTTTTCCTGTCTTTCTTTAAGAGTTGACTGTCGCTTTTCATCGCCATCATGCTTTCTTTCAATTTTTGTTTCTTTTCTTTTAGAGAAAGATTTCAAAGGAGTTGCATGAACAACCATTGACTCTTTTATGACACTATTTGCAATCTTTTTAGTGTCATCAAGTTCATTCTTGTCACTCCTCGATTTTGGAATCAAGAAATCTTTTGTTCCTCTATTGGCGATACTCAATTCCATATCATGGGCACGAGTCGCCAACTCTTCAAACGTGCGAGGTTTTATTCCCTGTAAAATATAAAGAAGTCCCCAATGCATGCCTTGGGTGCACATCTCCACTGCAGACAGTTCGGTGAGTCGATCCTTACAGTCAAGACTCAGAGCTCTCCATCGGTTGATGTAGTCGATGACTAGTTCTCCCTTTTGTTGTCTTGTGTTTGTCAACTCCATCATGCTGACGATACGTCGGGTGCTATAGAAACGGTTGAGAAAGTCCCTCTCAAGTTGCTCCCAATTATCAATGGATTCAGGTTCCAGATCGATGTACCAGTCGAAGGCATTTCCTTTGAGAGTTCGAACGAACTGTTTGACCAATAAATCTCCTCGCGTACCAGCAGTTTCACATGTTTCGATGAAGTGAGCAACATGTTGTTTTGGGTTGCCTTTTCCATCAAACTGTTGGAACTTGGGAGGTTGGTATCCATTCGGCATTCTGAGATTGTCGATCCTCTTCGTATATGGTTTGGAGTACAAGGAGAAAGTTTGAGCAGGTCCACCATATTGCGTTTTGATGGAGCTTGCAATCATCTCCTGTAATTGTTGAACAGACAACGATGCAATTGAGATCGAATTTTGTGGTTGACTTTCTTGCATAACTGCCTTCCCTTTGTCAGTATTCTTGACAGTATGTTTATGACTTGATTCAGCAGCATCACAACTTTCAATGTGATTCTTTAGAAATGCAATCTCATAATCCCTTTCTTCCACCACCTTCATGAGCATGTTCACCTTCTTTTCAAGCTCTGCCATTCTATTTTCACTTGTATCCACGTTAGTTACCATAACTGACATTATATTTGGCTGTGGAACCTCCTCGTTTGCGCACTCAGACAACGAGTTGTGTTCATCAACCGCAGGATTCTCTTTGATTACAATTCCACCTTTTGGTGGCTTAGAGATTTGCTCCCAAATATTCTTTGCAACTTCAAAAGGAGGCATATCTTCAGATGACTGAATCTCCCTTGAGCGGCTACGGGTGTTTGGCCGTTTGCCGATGTCACTGAGAGCTTTGGAAGTGTTGCCTTGAGATGTCATGATTTTCTTTGGATGTTCTTCGAAAAGAGAAAGAGATGAAAGGTAGAGATGGTCCCACCGGGCGTGCCAAATTGTTCACACGAGATTTCAAGAGAAATTTAATTCGTGGAATCGAACTTTGTATTGATTTATGTATTGCGGATACAATCTCTAATATTTACTCCTTTGATTCTTTCTCTCGGATACAAAAAGTAAAATTTAAAACTTCGTGATCTTCAATCTTCAAGAAGTTGTAACTACAAGTCAATTCAAGCTTCAATCTTCTGGAATTCAAGGAAAGTTTGATCTTCCAAGTCTTCGATCTTTCAGAAGGTTGATTTTGAGGTTGATGATAACTTGCACGTCTTGAGAGTCTTCAGAAGTTTTTGTCTTCAATTCTTCAGAGCTTCGATTCTTCTCTTCCATCCAAGGTCCTCCCAAGATGAATGAGAAGGTCTCTATTTATAGAGAATCTCGATGGGCTTTAGGTGGGCTTGGGCCCATTTGCTTGTTGGGCGGGCTTAGGCCTGGGCCCATCTGCTTGTTGGGTTTGGGCTTGGACCCATCTGCTTGTTGGGCTTGAGCTTGGACCTGTTTTCTTGACAGGCTTAGGCTCGGACCCATTTGCTCGATCGGTTTGGGCTTGGATCCATTTGCTTGGTGGGCTCGAACTCGACCCACTTATTTGCGCAAGCTCGGGTCCATTATTTCTTTGGCCCAATTTTTTTTAAGGCCTTGAACTAGGTTGAGTATGAGAAAACTTGACTACCTAAATCCAATCAAATTATAATTATCTCAATTTTGCTGTGATGACGTGGCGTGATTTAATTGGTCAAAATTTCCTGTTCAACAATAAGTACACATCAAGATGCATCTAAAATATTAGTTTTATTAAAATTTAGTGATTTTTTGAAGATTTGTTAAGTTAGAGGTGAATTAACGAAACATAATAATCATATAGAAATTGTTACATTTATCTACATCTAAAGTATAATCGTTAAGATGAGAACAAATTTATTCATGTTGTTTCACATTAGCCTCCTTTTATACGATTGCTTTTTGATATGGAGATATGTCTTTTACCATAACAACATCCTTCTCCCAAGAGGCGAGGAGGCAGTTTAGCTCCGTTTCTTTATTTGCCTTAAAAAAACCTACAATTCAATCAAATTAAGAGTTCAGGGTCAAATTTAACAAAAAAAAAAATTGTTTCTAAAAAATAATACTTATAAACAGGAGTGAAATAAAGAGTTATAAATGCTCTTTCTTTTGATTAAACAGGCAACAATTACCCCAAAATACATCAAAGAAAAAACATTTTTGTTTAGAATCAAAACCCAAAGTAGATATTGAAGAAAAAAGAGTCGGTATTATTTTGTAGGTGGCTTTGACTTTGAACACAGCAGCAGCAGGGGCAGCAGCAGCAGTGGTATCTCTAGCACACAGTGGGAATTCAAGCACAAATTGGTTAGCAATATGCAACCAGTTTGGTGATTTTTGTCAACAAGCGAGTGGCGCTGTGGTTGGCTCTTTTGCTGCTGTCTTGCTCTTTCTTTTACTCATCTTGTTCTCTGCTTTGTCTCTCAAAAATAGCCATTGATATCATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGCAGAAGCTTTTCAAAAAGTTTAAGCTTTTGTACACTTTTTCCATTTGCTTTGCTTTGTGTTTATTCCCATTTTATGCATCCATCCATTTGGGTTGTGTTTTTTTTTTTTTTCTTTTTCTTGTTTTGTTGGGAAAAGGGTTAAGGAAATCATTCTTATGTAACTTTTTTTTTTTTAAAAGGTTGTTGTTGGGTTTTACTTGCCTAAGATGATGAATTGAAAAGTTGTGTTATTATACATTGTATACTTGTTCGTATATAAATATATATATGTTTACAAGGTTGTGAT

mRNA sequence

CCTTCAATCAATCCTCAACACATTTCTCTCAATCCCCATTACGCTTCCTCACCTTCTTAATTCTCTCTCAACATTCCAAAAATGAAGACCGGCGAATCCACCGCCATTGACATTGCCCCCGAGACCAACAACAGTGGCCCAATTGGGAAGAAGAAGAGCACGACCCCGTTGCTGGCCGCCCCGGTGCCGGACAGGGGAACCCACCGGATGAAACGTGGGCTTGCGATATTTGACTTCGTTCTGAGAATCGGCGTTCTTGCGTCGGCGTTGGCGGCCGCCGCCGCTATGGGTACTAGTGAACAAACGTTGCCGTTTTTTACTCAATTCTTCCAGTTCGAGGCCAGCTACGATGATTTGCCTACTTTCCAGTTTTTTGTGGTGGCAATGGCCGTAGTTGCGGGATATGTGGTTTTGTCAATTCCATTCTCAATTGTTTGTATTATTCGTCCCCATGCTGCTGGGCCTCGCGTTCTTTTGTTGATTCTAGACTCGGTGGCTTTGACTTTGAACACAGCAGCAGCAGGGGCAGCAGCAGCAGTGGTATCTCTAGCACACAGTGGGAATTCAAGCACAAATTGGTTAGCAATATGCAACCAGTTTGGTGATTTTTGTCAACAAGCGAGTGGCGCTGTGGTTGGCTCTTTTGCTGCTGTCTTGCTCTTTCTTTTACTCATCTTGTTCTCTGCTTTGTCTCTCAAAAATAGCCATTGATATCATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGCAGAAGCTTTTCAAAAAGTTTAAGCTTTTGTACACTTTTTCCATTTGCTTTGCTTTGTGTTTATTCCCATTTTATGCATCCATCCATTTGGGTTGTGTTTTTTTTTTTTTTCTTTTTCTTGTTTTGTTGGGAAAAGGGTTAAGGAAATCATTCTTATGTAACTTTTTTTTTTTTAAAAGGTTGTTGTTGGGTTTTACTTGCCTAAGATGATGAATTGAAAAGTTGTGTTATTATACATTGTATACTTGTTCGTATATAAATATATATATGTTTACAAGGTTGTGAT

Coding sequence (CDS)

ATGAAGACCGGCGAATCCACCGCCATTGACATTGCCCCCGAGACCAACAACAGTGGCCCAATTGGGAAGAAGAAGAGCACGACCCCGTTGCTGGCCGCCCCGGTGCCGGACAGGGGAACCCACCGGATGAAACGTGGGCTTGCGATATTTGACTTCGTTCTGAGAATCGGCGTTCTTGCGTCGGCGTTGGCGGCCGCCGCCGCTATGGGTACTAGTGAACAAACGTTGCCGTTTTTTACTCAATTCTTCCAGTTCGAGGCCAGCTACGATGATTTGCCTACTTTCCAGTTTTTTGTGGTGGCAATGGCCGTAGTTGCGGGATATGTGGTTTTGTCAATTCCATTCTCAATTGTTTGTATTATTCGTCCCCATGCTGCTGGGCCTCGCGTTCTTTTGTTGATTCTAGACTCGGTGGCTTTGACTTTGAACACAGCAGCAGCAGGGGCAGCAGCAGCAGTGGTATCTCTAGCACACAGTGGGAATTCAAGCACAAATTGGTTAGCAATATGCAACCAGTTTGGTGATTTTTGTCAACAAGCGAGTGGCGCTGTGGTTGGCTCTTTTGCTGCTGTCTTGCTCTTTCTTTTACTCATCTTGTTCTCTGCTTTGTCTCTCAAAAATAGCCATTGA

Protein sequence

MKTGESTAIDIAPETNNSGPIGKKKSTTPLLAAPVPDRGTHRMKRGLAIFDFVLRIGVLASALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIVCIIRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQQASGAVVGSFAAVLLFLLLILFSALSLKNSH
Homology
[Close]
BLAST of MELO3C024564.jh1 vs. NCBI nr
Match: XP_008462597.1 (PREDICTED: casparian strip membrane protein 1 [Cucumis melo] >P0DI61.1 RecName: Full=Casparian strip membrane protein 1; Short=CmCASP1 [Cucumis melo] >KAA0025237.1 casparian strip membrane protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 388 bits (996), Expect = 1.95e-135
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0 

Query: 1   MKTGESTAIDIAPETNNSGPIGKKKSTTPLLAAPVPDRGTHRMKRGLAIFDFVLRIGVLA 60
           MKTGESTAIDIAPETNNSGPIGKKKSTTPLLAAPVPDRGTHRMKRGLAIFDFVLRIGVLA
Sbjct: 1   MKTGESTAIDIAPETNNSGPIGKKKSTTPLLAAPVPDRGTHRMKRGLAIFDFVLRIGVLA 60

Query: 61  SALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIVCI 120
           SALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIVCI
Sbjct: 61  SALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIVCI 120

Query: 121 IRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQQA 180
           IRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQQA
Sbjct: 121 IRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQQA 180

Query: 181 SGAVVGSFAAVLLFLLLILFSALSLKNSH 209
           SGAVVGSFAAVLLFLLLILFSALSLKNSH
Sbjct: 181 SGAVVGSFAAVLLFLLLILFSALSLKNSH 209

[Close]
BLAST of MELO3C024564.jh1 vs. NCBI nr
Match: XP_004143331.1 (casparian strip membrane protein 1 [Cucumis sativus] >KGN48281.1 hypothetical protein Csa_003708 [Cucumis sativus])

HSP 1 Score: 377 bits (969), Expect = 2.73e-131
Identity = 204/211 (96.68%), Postives = 208/211 (98.58%), Query Frame = 0 

Query: 1   MKTGESTAIDIAPETNNSGPIGKKKSTTPLLAAPVP--DRGTHRMKRGLAIFDFVLRIGV 60
           MKTGEST+IDIAPETNNSGPIGKKKSTTPLLAAPVP  DRGTHRMKRGL+IFDFVLRIGV
Sbjct: 1   MKTGESTSIDIAPETNNSGPIGKKKSTTPLLAAPVPVTDRGTHRMKRGLSIFDFVLRIGV 60

Query: 61  LASALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIV 120
           LASALAAAA MGTS+QTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIV
Sbjct: 61  LASALAAAATMGTSDQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIV 120

Query: 121 CIIRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQ 180
           CIIRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLA+CNQFGDFCQ
Sbjct: 121 CIIRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAVCNQFGDFCQ 180

Query: 181 QASGAVVGSFAAVLLFLLLILFSALSLKNSH 209
           QASGAVVGSFAAVLLFLLLILFSALSLKNSH
Sbjct: 181 QASGAVVGSFAAVLLFLLLILFSALSLKNSH 211

[Close]
BLAST of MELO3C024564.jh1 vs. NCBI nr
Match: XP_038883194.1 (casparian strip membrane protein 1 [Benincasa hispida])

HSP 1 Score: 366 bits (939), Expect = 1.02e-126
Identity = 196/211 (92.89%), Postives = 204/211 (96.68%), Query Frame = 0 

Query: 1   MKTGESTAIDIAPETNNSGPIGKKKSTTPLLAAPVP--DRGTHRMKRGLAIFDFVLRIGV 60
           M+ GESTAID+APETNNSGPIGKKKSTTPLLA PVP  DRGTHRMKRGLAIFDFVLRIG 
Sbjct: 1   MRNGESTAIDVAPETNNSGPIGKKKSTTPLLATPVPVPDRGTHRMKRGLAIFDFVLRIGA 60

Query: 61  LASALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIV 120
           LASALAAAAAMGTS QTLPFFTQFFQFEASYDDLPTFQFFVVAM +VAGYVVLSIPFSIV
Sbjct: 61  LASALAAAAAMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVVAMGIVAGYVVLSIPFSIV 120

Query: 121 CIIRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQ 180
           CI+RPHAAGPR+LLLILD+VALTLNTAAAGAAAAVVSLAHSGNSSTNWL+ICNQFGDFCQ
Sbjct: 121 CIVRPHAAGPRLLLLILDAVALTLNTAAAGAAAAVVSLAHSGNSSTNWLSICNQFGDFCQ 180

Query: 181 QASGAVVGSFAAVLLFLLLILFSALSLKNSH 209
           QASGAVVGSFAAVLLFLLLILFSALSLK+SH
Sbjct: 181 QASGAVVGSFAAVLLFLLLILFSALSLKSSH 211

[Close]
BLAST of MELO3C024564.jh1 vs. NCBI nr
Match: XP_022133169.1 (casparian strip membrane protein 1 [Momordica charantia])

HSP 1 Score: 349 bits (895), Expect = 5.35e-120
Identity = 187/209 (89.47%), Postives = 197/209 (94.26%), Query Frame = 0 

Query: 2   KTGESTAIDIAPETNNSGPIGKKKSTTPLLAAPVP---DRGTHRMKRGLAIFDFVLRIGV 61
           K  ESTAID+APE  NSGPIGKKKSTTPLLAAPVP   DRGTHRMKRGLAIFDFVLRIG 
Sbjct: 3   KNSESTAIDVAPENPNSGPIGKKKSTTPLLAAPVPVRQDRGTHRMKRGLAIFDFVLRIGA 62

Query: 62  LASALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIV 121
           LA+ALAAAAAMGTS++TLPFFTQFFQFEASYDDLPTFQFFV+AM +VAGYVVLSIPFSIV
Sbjct: 63  LAAALAAAAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFVIAMGIVAGYVVLSIPFSIV 122

Query: 122 CIIRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQ 181
           CI+RPHA GPR+LLLILDSVALTL T AAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQ
Sbjct: 123 CIVRPHAVGPRLLLLILDSVALTLTTVAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQ 182

Query: 182 QASGAVVGSFAAVLLFLLLILFSALSLKN 207
           QASGAV+GSFAAVLLFLLLILFSALSLK+
Sbjct: 183 QASGAVIGSFAAVLLFLLLILFSALSLKH 211

[Close]
BLAST of MELO3C024564.jh1 vs. NCBI nr
Match: XP_022977901.1 (casparian strip membrane protein 1 [Cucurbita maxima])

HSP 1 Score: 345 bits (885), Expect = 1.79e-118
Identity = 186/212 (87.74%), Postives = 197/212 (92.92%), Query Frame = 0 

Query: 1   MKTGESTAIDIAPETNNSGPIGKKKSTTPLLAAPVP---DRGTHRMKRGLAIFDFVLRIG 60
           MK  ES+AI++A ET NSGPIGKKKSTTPLLAA VP   DRGTHRMKRGLAIFD VLRIG
Sbjct: 1   MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60

Query: 61  VLASALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSI 120
            L+SALAAAA MGTS QTLPFFTQFFQFEASYDDLPTFQFFV+ M +VAGYVVLSIPFSI
Sbjct: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLSIPFSI 120

Query: 121 VCIIRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFC 180
           VCIIRPHAAGPR+LLLILDSVAL L+TAAAGAAAAVV+LAHSGNSSTNWLA+CNQFGDFC
Sbjct: 121 VCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180

Query: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNSH 209
           QQASGAVVGSFAAVLLFLLLILFSALSLKN+H
Sbjct: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNAH 212

[Close]
BLAST of MELO3C024564.jh1 vs. ExPASy Swiss-Prot
Match: P0DI61 (Casparian strip membrane protein 1 OS=Cucumis melo OX=3656 PE=2 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 1.3e-106
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0 

Query: 1   MKTGESTAIDIAPETNNSGPIGKKKSTTPLLAAPVPDRGTHRMKRGLAIFDFVLRIGVLA 60
           MKTGESTAIDIAPETNNSGPIGKKKSTTPLLAAPVPDRGTHRMKRGLAIFDFVLRIGVLA
Sbjct: 1   MKTGESTAIDIAPETNNSGPIGKKKSTTPLLAAPVPDRGTHRMKRGLAIFDFVLRIGVLA 60

Query: 61  SALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIVCI 120
           SALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIVCI
Sbjct: 61  SALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIVCI 120

Query: 121 IRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQQA 180
           IRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQQA
Sbjct: 121 IRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQQA 180

Query: 181 SGAVVGSFAAVLLFLLLILFSALSLKNSH 210
           SGAVVGSFAAVLLFLLLILFSALSLKNSH
Sbjct: 181 SGAVVGSFAAVLLFLLLILFSALSLKNSH 209

[Close]
BLAST of MELO3C024564.jh1 vs. ExPASy Swiss-Prot
Match: B9IIR5 (Casparian strip membrane protein 2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_576556 PE=2 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 2.2e-66
Identity = 135/201 (67.16%), Postives = 172/201 (85.57%), Query Frame = 0 

Query: 6   STAIDIAPETNNSGPIGKKKSTTPLLAAPVPDRGTHRMKRGLAIFDFVLRIGVLASALAA 65
           ST ID+ PE+++       K T PL+AAP+ ++G +  K+G+AIFDF+LR+  +A+ALAA
Sbjct: 5   STEIDM-PESSS-----VSKGTAPLIAAPMKEKGGY--KKGIAIFDFILRLAAIATALAA 64

Query: 66  AAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIVCIIRPHA 125
           AA+MGTS++TLPFFTQFFQF+ASYDDLPTFQFFV+AMA+VAGY+VLS+PFSIV I+RPHA
Sbjct: 65  AASMGTSDETLPFFTQFFQFQASYDDLPTFQFFVIAMAIVAGYLVLSLPFSIVAIVRPHA 124

Query: 126 AGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQQASGAVV 185
           AGPR+LL+ILD+VALTLNTAA  AAAA+V LAH+GNSSTNWLAIC QFGDFCQ+ SGAVV
Sbjct: 125 AGPRLLLIILDTVALTLNTAAGAAAAAIVYLAHNGNSSTNWLAICQQFGDFCQKNSGAVV 184

Query: 186 GSFAAVLLFLLLILFSALSLK 207
            SF  V++F+ L++ SA +L+
Sbjct: 185 ASFITVVIFVFLLVLSAFALR 197

[Close]
BLAST of MELO3C024564.jh1 vs. ExPASy Swiss-Prot
Match: B9HBX2 (Casparian strip membrane protein 1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_763057 PE=2 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 2.9e-63
Identity = 131/202 (64.85%), Postives = 167/202 (82.67%), Query Frame = 0 

Query: 5   ESTAIDIAPETNNSGPIGKKKSTTPLLAAPVPDRGTHRMKRGLAIFDFVLRIGVLASALA 64
           ES AIDI PE+++       K   PL+A    ++G +R  +G+AIFDF+LR+  +A+ALA
Sbjct: 4   ESAAIDI-PESSSVA-----KGKAPLIAVSRNEKGGYR--KGIAIFDFILRLAAIATALA 63

Query: 65  AAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIVCIIRPH 124
           AAAAMGTS++TLPFFTQFFQF+ASYDDLPTFQFFV+A+A+V GY+VLS+PFSIV I+RPH
Sbjct: 64  AAAAMGTSDETLPFFTQFFQFQASYDDLPTFQFFVIAIAIVGGYLVLSLPFSIVAIVRPH 123

Query: 125 AAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQQASGAV 184
           A GPR+LL+ILD+VALTLNTAA  AAAA+V LAH+GNS+TNWLAIC Q+GDFCQ+ SGAV
Sbjct: 124 AVGPRLLLIILDAVALTLNTAAGAAAAAIVYLAHNGNSNTNWLAICQQYGDFCQKVSGAV 183

Query: 185 VGSFAAVLLFLLLILFSALSLK 207
           V SF  V++F+ LI+ SA +L+
Sbjct: 184 VASFITVVIFVFLIVLSAFALR 197

[Close]
BLAST of MELO3C024564.jh1 vs. ExPASy Swiss-Prot
Match: B9IIR4 (Casparian strip membrane protein 3 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_907513 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 3.2e-62
Identity = 132/201 (65.67%), Postives = 161/201 (80.10%), Query Frame = 0 

Query: 6   STAIDIAPETNNSGPIGKKKSTTPLLAAPVPDRGTHRMKRGLAIFDFVLRIGVLASALAA 65
           S  +DI  +T+ +      K T PL+AA    +G +  K+GLAIFD VLR+G + +ALAA
Sbjct: 2   SARVDIPADTSAAA-----KGTAPLIAASTHVKGGY--KKGLAIFDLVLRLGAVVTALAA 61

Query: 66  AAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIVCIIRPHA 125
           AA MGT++QTLPFFTQFFQF+ASYDDLPTFQFFV+AMA+V+GY+VLS+PFSIV IIRPHA
Sbjct: 62  AATMGTTDQTLPFFTQFFQFQASYDDLPTFQFFVIAMAIVSGYLVLSLPFSIVAIIRPHA 121

Query: 126 AGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQQASGAVV 185
            GPR+LL+ILD+VALTLNTAAA AA A+V LA +GNSS NWL IC QFGDFCQ+ASGAVV
Sbjct: 122 TGPRLLLIILDTVALTLNTAAAAAAVAIVDLAQNGNSSANWLGICQQFGDFCQKASGAVV 181

Query: 186 GSFAAVLLFLLLILFSALSLK 207
            SF A  + L LI+ SAL+L+
Sbjct: 182 ASFIAAGVLLFLIVISALALR 195

[Close]
BLAST of MELO3C024564.jh1 vs. ExPASy Swiss-Prot
Match: P0DI43 (Casparian strip membrane protein 1 OS=Theobroma cacao OX=3641 PE=2 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.0e-60
Identity = 129/206 (62.62%), Postives = 160/206 (77.67%), Query Frame = 0 

Query: 1   MKTGESTAIDIAPETNNSGPIGKKKSTTPLLAAPVPDRGTHRMKRGLAIFDFVLRIGVLA 60
           MK+G+  AID+ PE   S  + K K+  PL+A P   +     K+GL IFDF+LR+G + 
Sbjct: 1   MKSGDHAAIDV-PE---SSAVAKGKA--PLIATPREQKS--GFKKGLGIFDFLLRLGAII 60

Query: 61  SALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIVCI 120
           +ALAAAA MGTS++TLPFFTQFFQFEASYDDLPTF FFV+AMA++ GY+VLS+PFSIV I
Sbjct: 61  AALAAAATMGTSDETLPFFTQFFQFEASYDDLPTFMFFVIAMALIGGYLVLSLPFSIVTI 120

Query: 121 IRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQQA 180
           +RPHA  PR+LL ILD VALTL TAA  AAAA+V LAH+GN +TNWLAIC QFGDFCQ+ 
Sbjct: 121 VRPHAVAPRLLLFILDIVALTLTTAAGAAAAAIVYLAHNGNPNTNWLAICQQFGDFCQEV 180

Query: 181 SGAVVGSFAAVLLFLLLILFSALSLK 207
           SGAVV SF  V++ + L+L S ++LK
Sbjct: 181 SGAVVASFVTVVVLMSLVLLSGVALK 198

[Close]
BLAST of MELO3C024564.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SKE2 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G00860 PE=3 SV=1)

HSP 1 Score: 388 bits (996), Expect = 9.42e-136
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0 

Query: 1   MKTGESTAIDIAPETNNSGPIGKKKSTTPLLAAPVPDRGTHRMKRGLAIFDFVLRIGVLA 60
           MKTGESTAIDIAPETNNSGPIGKKKSTTPLLAAPVPDRGTHRMKRGLAIFDFVLRIGVLA
Sbjct: 1   MKTGESTAIDIAPETNNSGPIGKKKSTTPLLAAPVPDRGTHRMKRGLAIFDFVLRIGVLA 60

Query: 61  SALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIVCI 120
           SALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIVCI
Sbjct: 61  SALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIVCI 120

Query: 121 IRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQQA 180
           IRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQQA
Sbjct: 121 IRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQQA 180

Query: 181 SGAVVGSFAAVLLFLLLILFSALSLKNSH 209
           SGAVVGSFAAVLLFLLLILFSALSLKNSH
Sbjct: 181 SGAVVGSFAAVLLFLLLILFSALSLKNSH 209

[Close]
BLAST of MELO3C024564.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CHB9 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103500916 PE=3 SV=1)

HSP 1 Score: 388 bits (996), Expect = 9.42e-136
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0 

Query: 1   MKTGESTAIDIAPETNNSGPIGKKKSTTPLLAAPVPDRGTHRMKRGLAIFDFVLRIGVLA 60
           MKTGESTAIDIAPETNNSGPIGKKKSTTPLLAAPVPDRGTHRMKRGLAIFDFVLRIGVLA
Sbjct: 1   MKTGESTAIDIAPETNNSGPIGKKKSTTPLLAAPVPDRGTHRMKRGLAIFDFVLRIGVLA 60

Query: 61  SALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIVCI 120
           SALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIVCI
Sbjct: 61  SALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIVCI 120

Query: 121 IRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQQA 180
           IRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQQA
Sbjct: 121 IRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQQA 180

Query: 181 SGAVVGSFAAVLLFLLLILFSALSLKNSH 209
           SGAVVGSFAAVLLFLLLILFSALSLKNSH
Sbjct: 181 SGAVVGSFAAVLLFLLLILFSALSLKNSH 209

[Close]
BLAST of MELO3C024564.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KKJ8 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G453800 PE=3 SV=1)

HSP 1 Score: 377 bits (969), Expect = 1.32e-131
Identity = 204/211 (96.68%), Postives = 208/211 (98.58%), Query Frame = 0 

Query: 1   MKTGESTAIDIAPETNNSGPIGKKKSTTPLLAAPVP--DRGTHRMKRGLAIFDFVLRIGV 60
           MKTGEST+IDIAPETNNSGPIGKKKSTTPLLAAPVP  DRGTHRMKRGL+IFDFVLRIGV
Sbjct: 1   MKTGESTSIDIAPETNNSGPIGKKKSTTPLLAAPVPVTDRGTHRMKRGLSIFDFVLRIGV 60

Query: 61  LASALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIV 120
           LASALAAAA MGTS+QTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIV
Sbjct: 61  LASALAAAATMGTSDQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIV 120

Query: 121 CIIRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQ 180
           CIIRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLA+CNQFGDFCQ
Sbjct: 121 CIIRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAVCNQFGDFCQ 180

Query: 181 QASGAVVGSFAAVLLFLLLILFSALSLKNSH 209
           QASGAVVGSFAAVLLFLLLILFSALSLKNSH
Sbjct: 181 QASGAVVGSFAAVLLFLLLILFSALSLKNSH 211

[Close]
BLAST of MELO3C024564.jh1 vs. ExPASy TrEMBL
Match: A0A6J1BV79 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111005840 PE=3 SV=1)

HSP 1 Score: 349 bits (895), Expect = 2.59e-120
Identity = 187/209 (89.47%), Postives = 197/209 (94.26%), Query Frame = 0 

Query: 2   KTGESTAIDIAPETNNSGPIGKKKSTTPLLAAPVP---DRGTHRMKRGLAIFDFVLRIGV 61
           K  ESTAID+APE  NSGPIGKKKSTTPLLAAPVP   DRGTHRMKRGLAIFDFVLRIG 
Sbjct: 3   KNSESTAIDVAPENPNSGPIGKKKSTTPLLAAPVPVRQDRGTHRMKRGLAIFDFVLRIGA 62

Query: 62  LASALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIV 121
           LA+ALAAAAAMGTS++TLPFFTQFFQFEASYDDLPTFQFFV+AM +VAGYVVLSIPFSIV
Sbjct: 63  LAAALAAAAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFVIAMGIVAGYVVLSIPFSIV 122

Query: 122 CIIRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQ 181
           CI+RPHA GPR+LLLILDSVALTL T AAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQ
Sbjct: 123 CIVRPHAVGPRLLLLILDSVALTLTTVAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQ 182

Query: 182 QASGAVVGSFAAVLLFLLLILFSALSLKN 207
           QASGAV+GSFAAVLLFLLLILFSALSLK+
Sbjct: 183 QASGAVIGSFAAVLLFLLLILFSALSLKH 211

[Close]
BLAST of MELO3C024564.jh1 vs. ExPASy TrEMBL
Match: A0A6J1IL91 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111478054 PE=3 SV=1)

HSP 1 Score: 345 bits (885), Expect = 8.65e-119
Identity = 186/212 (87.74%), Postives = 197/212 (92.92%), Query Frame = 0 

Query: 1   MKTGESTAIDIAPETNNSGPIGKKKSTTPLLAAPVP---DRGTHRMKRGLAIFDFVLRIG 60
           MK  ES+AI++A ET NSGPIGKKKSTTPLLAA VP   DRGTHRMKRGLAIFD VLRIG
Sbjct: 1   MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60

Query: 61  VLASALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSI 120
            L+SALAAAA MGTS QTLPFFTQFFQFEASYDDLPTFQFFV+ M +VAGYVVLSIPFSI
Sbjct: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVLSIPFSI 120

Query: 121 VCIIRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFC 180
           VCIIRPHAAGPR+LLLILDSVAL L+TAAAGAAAAVV+LAHSGNSSTNWLA+CNQFGDFC
Sbjct: 121 VCIIRPHAAGPRLLLLILDSVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180

Query: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNSH 209
           QQASGAVVGSFAAVLLFLLLILFSALSLKN+H
Sbjct: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNAH 212

[Close]
BLAST of MELO3C024564.jh1 vs. TAIR 10
Match: AT5G06200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 224.2 bits (570), Expect = 1.0e-58
Identity = 121/202 (59.90%), Postives = 156/202 (77.23%), Query Frame = 0 

Query: 5   ESTAIDIAPETNNSGPIGKKKSTTPLLAAPVPDRGTHRMKRGLAIFDFVLRIGVLASALA 64
           +S A+D+  E+++       K   PLL       G+   KRGL+IFDF+LR+  + +ALA
Sbjct: 4   DSIAVDVPAESSS-----VIKGKAPLLGLARDHTGSGGYKRGLSIFDFLLRLAAIVAALA 63

Query: 65  AAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIVCIIRPH 124
           AAA MGTS++TLPFFTQF QFEASYDDLPTFQFFVVA+A+VAGY+VLS+PFS+V I+RP 
Sbjct: 64  AAATMGTSDETLPFFTQFLQFEASYDDLPTFQFFVVAIAIVAGYLVLSLPFSVVTIVRPL 123

Query: 125 AAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQQASGAV 184
           A  PR+LLL+LD+ AL L+TAAA AAAA+V LAH+GN++TNWL IC QFGDFCQ+ SGAV
Sbjct: 124 AVAPRLLLLVLDTAALALDTAAASAAAAIVYLAHNGNTNTNWLPICQQFGDFCQKTSGAV 183

Query: 185 VGSFAAVLLFLLLILFSALSLK 207
           V +FA+V    +L++ S +SLK
Sbjct: 184 VSAFASVTFLAILVVISGVSLK 200

[Close]
BLAST of MELO3C024564.jh1 vs. TAIR 10
Match: AT3G11550.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 216.1 bits (549), Expect = 2.7e-56
Identity = 119/204 (58.33%), Postives = 154/204 (75.49%), Query Frame = 0 

Query: 5   ESTAIDIAPETNNSGPIGKKKSTTPLL--AAPVPDRGTHRMKRGLAIFDFVLRIGVLASA 64
           EST ID+  E++++      K   PL+  A      G+    RGLAIFDF+LR+  + +A
Sbjct: 4   ESTFIDVPAESSSA-----MKGKAPLIGVARDHTTSGSGGYNRGLAIFDFLLRLAAIVAA 63

Query: 65  LAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIVCIIR 124
           LAAAA MGTS++TLPFFTQF QFEASYDDLPTFQFFV+AMA+V GY+VLS+P S+V I+R
Sbjct: 64  LAAAATMGTSDETLPFFTQFLQFEASYDDLPTFQFFVIAMALVGGYLVLSLPISVVTILR 123

Query: 125 PHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQQASG 184
           P A  PR+LLL+LD+  L LNTAAA +AAA+  LAHSGN +TNWL IC QFGDFCQ++SG
Sbjct: 124 PLATAPRLLLLVLDTGVLALNTAAASSAAAISYLAHSGNQNTNWLPICQQFGDFCQKSSG 183

Query: 185 AVVGSFAAVLLFLLLILFSALSLK 207
           AVV +F +V+ F +L++ S ++LK
Sbjct: 184 AVVSAFVSVVFFTILVVISGVALK 202

[Close]
BLAST of MELO3C024564.jh1 vs. TAIR 10
Match: AT2G36100.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 203.4 bits (516), Expect = 1.8e-52
Identity = 115/205 (56.10%), Postives = 149/205 (72.68%), Query Frame = 0 

Query: 5   ESTAIDI---APETNNSGPIGKKKSTTPLLAAPVPDRGTHRMKRGLAIFDFVLRIGVLAS 64
           EST ID+   +  T +S  + K       +A  V  RG    KRGLAIFDF+LR+  +A 
Sbjct: 4   ESTTIDVGEPSTVTKSSSHVVKDAKKKGFVA--VASRG--GAKRGLAIFDFLLRLAAIAV 63

Query: 65  ALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIVCII 124
            + AA+ M T+E+TLPFFTQF QF+A YDDLP FQ+FV+A+AVVA Y+VLS+PFSIV I+
Sbjct: 64  TIGAASVMYTAEETLPFFTQFLQFQAGYDDLPAFQYFVIAVAVVASYLVLSLPFSIVSIV 123

Query: 125 RPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQQAS 184
           RPHA  PR++LLI D++ +TLNT+AA AAA++  LAH+GN STNWL IC QFGDFCQ  S
Sbjct: 124 RPHAVAPRLILLICDTLVVTLNTSAAAAAASITYLAHNGNQSTNWLPICQQFGDFCQNVS 183

Query: 185 GAVVGSFAAVLLFLLLILFSALSLK 207
            AVV    A+L F++LI+ SA++LK
Sbjct: 184 TAVVADSIAILFFIVLIIISAIALK 204

[Close]
BLAST of MELO3C024564.jh1 vs. TAIR 10
Match: AT2G27370.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 183.7 bits (465), Expect = 1.5e-46
Identity = 96/165 (58.18%), Postives = 124/165 (75.15%), Query Frame = 0 

Query: 44  KRGLAIFDFVLRIGVLASALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMA 103
           KRG+AIFDFVLR+    +A+AAAA M T+E+TLPFFTQF QF+A Y DLPT   FV+  +
Sbjct: 56  KRGVAIFDFVLRLIAAITAMAAAAKMATTEETLPFFTQFLQFQADYTDLPTMSSFVIVNS 115

Query: 104 VVAGYVVLSIPFSIVCIIRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSS 163
           +V GY+ LS+PFSIVCI+RP A  PR+ L++ D+V + L   AA A+AA+V LAH+GNSS
Sbjct: 116 IVGGYLTLSLPFSIVCILRPLAVPPRLFLILCDTVMMGLTLMAASASAAIVYLAHNGNSS 175

Query: 164 TNWLAICNQFGDFCQQASGAVVGSFAAVLLFLLLILFSALSLKNS 209
           +NWL +C QFGDFCQ  SGAVV SF A  L + L++ SA +LK +
Sbjct: 176 SNWLPVCQQFGDFCQGTSGAVVASFIAATLLMFLVILSAFALKRT 220

[Close]
BLAST of MELO3C024564.jh1 vs. TAIR 10
Match: AT5G15290.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 160.6 bits (405), Expect = 1.4e-39
Identity = 84/167 (50.30%), Postives = 119/167 (71.26%), Query Frame = 0 

Query: 43  MKRGLAIFDFVLRIGVLASALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAM 102
           M R +AI +F+LRI    + + +A  MGT+ +TLPFFTQF +F+A Y+DLP   FFVVA 
Sbjct: 21  MSRRIAILEFILRIVAFFNTIGSAILMGTTHETLPFFTQFIRFQAEYNDLPALTFFVVAN 80

Query: 103 AVVAGYVVLSIPFSIVCIIRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNS 162
           AVV+GY++LS+  + V I++      R+LL+ILD   L L T+ A +AAA+V LAH+GN+
Sbjct: 81  AVVSGYLILSLTLAFVHIVKRKTQNTRILLIILDVAMLGLLTSGASSAAAIVYLAHNGNN 140

Query: 163 STNWLAICNQFGDFCQQASGAVVGSFAAVLLFLLLILFSALSLKNSH 210
            TNW AIC QF  FC++ SG+++GSF A++L +LLIL SA++L   H
Sbjct: 141 KTNWFAICQQFNSFCERISGSLIGSFIAIVLLILLILLSAIALSRRH 187

The following BLAST results are available for this feature:
BLAST of MELO3C024564.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008462597.11.95e-135100.00PREDICTED: casparian strip membrane protein 1 [Cucumis melo] >P0DI61.1 RecName: ... [more]
XP_004143331.12.73e-13196.68casparian strip membrane protein 1 [Cucumis sativus] >KGN48281.1 hypothetical pr... [more]
XP_038883194.11.02e-12692.89casparian strip membrane protein 1 [Benincasa hispida][more]
XP_022133169.15.35e-12089.47casparian strip membrane protein 1 [Momordica charantia][more]
XP_022977901.11.79e-11887.74casparian strip membrane protein 1 [Cucurbita maxima][more]
BLAST of MELO3C024564.jh1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P0DI611.3e-106100.00Casparian strip membrane protein 1 OS=Cucumis melo OX=3656 PE=2 SV=1[more]
B9IIR52.2e-6667.16Casparian strip membrane protein 2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_... [more]
B9HBX22.9e-6364.85Casparian strip membrane protein 1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_... [more]
B9IIR43.2e-6265.67Casparian strip membrane protein 3 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_... [more]
P0DI433.0e-6062.62Casparian strip membrane protein 1 OS=Theobroma cacao OX=3641 PE=2 SV=1[more]
BLAST of MELO3C024564.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SKE29.42e-136100.00CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G00... [more]
A0A1S3CHB99.42e-136100.00CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103500916 PE=3 SV=1[more]
A0A0A0KKJ81.32e-13196.68CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G453800 PE=3 SV=1[more]
A0A6J1BV792.59e-12089.47CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111005840 PE=3 SV=1[more]
A0A6J1IL918.65e-11987.74CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111478054 PE=3 SV=1[more]
BLAST of MELO3C024564.jh1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G06200.11.0e-5859.90Uncharacterised protein family (UPF0497) [more]
AT3G11550.12.7e-5658.33Uncharacterised protein family (UPF0497) [more]
AT2G36100.11.8e-5256.10Uncharacterised protein family (UPF0497) [more]
AT2G27370.11.5e-4658.18Uncharacterised protein family (UPF0497) [more]
AT5G15290.11.4e-3950.30Uncharacterised protein family (UPF0497) [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006702Casparian strip membrane protein domainPFAMPF04535DUF588coord: 45..193
e-value: 3.0E-45
score: 153.7
IPR006459Casparian strip membrane proteinTIGRFAMTIGR01569TIGR01569coord: 52..204
e-value: 4.1E-41
score: 138.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35
NoneNo IPR availablePANTHERPTHR11615:SF281CASPARIAN STRIP MEMBRANE PROTEIN 3coord: 19..208
NoneNo IPR availablePANTHERPTHR11615NITRATE, FORMATE, IRON DEHYDROGENASEcoord: 19..208

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C024564.jh1.t1MELO3C024564.jh1.t1mRNA