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MELO3C024535.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonstart_codonCDSpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATAGAAGTGTTATATATACAATGGGGAAGAGATCACCATCACCACCACCACCACCACCACCATCCTCATCAAAGGCAAAGGTGGTTAGTTTGGTAATTTTGGTATTGAGTTGCTTAATATGGTGTTGCAAGAGCAGTGAATTATTAGAGTACAATTGTGAAGAGATATATGTTGTTCATGAAGGAGAAACTTTGCAAAGCATTAGTGAAAAATGTGGAGATCCATTCATTGTTGAAGAAAATCCTCACATTAATGATCCAGATGATGTTTTTCCTGGTTTGGTTATCAAGATCACTCCTTTTCACCATTTTATCAAATATCCCACCTTTCTCACACCTTAATTATTATTCATCTAATTCAATTATATTTTTCTTGGGTTATTATATCATTATATATATTGCTTCTTCTTTTGTTTCCGATAAGTTTTTGTAATGGATAATCTATGAACATGCGTATGTGTATCTTTTTAGTTAACAATTGTAATGGTGTGGAAAATTGAACCGTCCGTCCTTGAAACGATAATTTTATTTTTCTTTTTGACAATATAGGTGTAAAGAAGAATCAAACTTTTTAACTTTTTCGAGATTTATTCTATTTGCTTTATAATAATACTTATGCTTATCATGATTTA ATAGAAGTGTTATATATACAATGGGGAAGAGATCACCATCACCACCACCACCACCACCACCATCCTCATCAAAGGCAAAGGTGGTTAGTTTGGTAATTTTGGTATTGAGTTGCTTAATATGGTGTTGCAAGAGCAGTGAATTATTAGAGTACAATTGTGAAGAGATATATGTTGTTCATGAAGGAGAAACTTTGCAAAGCATTAGTGAAAAATGTGGAGATCCATTCATTGTTGAAGAAAATCCTCACATTAATGATCCAGATGATGTTTTTCCTGGTTTGGTTATCAAGATCACTCCTTTTCACCATTTTATCAAATATCCCACCTTTCTCACACCTTAATTATTATTCATCTAATTCAATTATATTTTTCTTGGGTTATTATATCATTATATATATTGCTTCTTCTTTTGTTTCCGATAAGTTTTTGTAATGGATAATCTATGAACATGCGTATGTGTATCTTTTTAGTTAACAATTGTAATGGTGTGGAAAATTGAACCGTCCGTCCTTGAAACGATAATTTTATTTTTCTTTTTGACAATATAGGTGTAAAGAAGAATCAAACTTTTTAACTTTTTCGAGATTTATTCTATTTGCTTTATAATAATACTTATGCTTATCATGATTTA ATGGGGAAGAGATCACCATCACCACCACCACCACCACCACCATCCTCATCAAAGGCAAAGGTGGTTAGTTTGGTAATTTTGGTATTGAGTTGCTTAATATGGTGTTGCAAGAGCAGTGAATTATTAGAGTACAATTGTGAAGAGATATATGTTGTTCATGAAGGAGAAACTTTGCAAAGCATTAGTGAAAAATGTGGAGATCCATTCATTGTTGAAGAAAATCCTCACATTAATGATCCAGATGATGTTTTTCCTGGTTTGGTTATCAAGATCACTCCTTTTCACCATTTTATCAAATATCCCACCTTTCTCACACCTTAA MGKRSPSPPPPPPPSSSKAKVVSLVILVLSCLIWCCKSSELLEYNCEEIYVVHEGETLQSISEKCGDPFIVEENPHINDPDDVFPGLVIKITPFHHFIKYPTFLTP Homology
BLAST of MELO3C024535.jh1 vs. NCBI nr
Match: KAE8647420.1 (hypothetical protein Csa_003059 [Cucumis sativus]) HSP 1 Score: 186 bits (473), Expect = 4.43e-59 Identity = 95/106 (89.62%), Postives = 95/106 (89.62%), Query Frame = 0
BLAST of MELO3C024535.jh1 vs. NCBI nr
Match: KAG6595189.1 (hypothetical protein SDJN03_11742, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027207.1 hypothetical protein SDJN02_11218, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 114 bits (284), Expect = 2.15e-30 Identity = 56/82 (68.29%), Postives = 65/82 (79.27%), Query Frame = 0
BLAST of MELO3C024535.jh1 vs. NCBI nr
Match: XP_022744694.1 (uncharacterized protein LOC111295462 [Durio zibethinus]) HSP 1 Score: 105 bits (262), Expect = 6.75e-27 Identity = 54/85 (63.53%), Postives = 63/85 (74.12%), Query Frame = 0
BLAST of MELO3C024535.jh1 vs. NCBI nr
Match: XP_019179717.1 (PREDICTED: uncharacterized protein LOC109174930 [Ipomoea nil]) HSP 1 Score: 104 bits (259), Expect = 1.72e-26 Identity = 48/52 (92.31%), Postives = 49/52 (94.23%), Query Frame = 0
BLAST of MELO3C024535.jh1 vs. NCBI nr
Match: XP_010271716.1 (PREDICTED: uncharacterized protein LOC104607716 [Nelumbo nucifera]) HSP 1 Score: 104 bits (259), Expect = 2.04e-26 Identity = 55/82 (67.07%), Postives = 63/82 (76.83%), Query Frame = 0
BLAST of MELO3C024535.jh1 vs. ExPASy TrEMBL
Match: A0A6P5YVX7 (uncharacterized protein LOC111295462 OS=Durio zibethinus OX=66656 GN=LOC111295462 PE=4 SV=1) HSP 1 Score: 105 bits (262), Expect = 3.27e-27 Identity = 54/85 (63.53%), Postives = 63/85 (74.12%), Query Frame = 0
BLAST of MELO3C024535.jh1 vs. ExPASy TrEMBL
Match: A0A1U8AYB4 (uncharacterized protein LOC104607716 OS=Nelumbo nucifera OX=4432 GN=LOC104607716 PE=4 SV=1) HSP 1 Score: 104 bits (259), Expect = 9.88e-27 Identity = 55/82 (67.07%), Postives = 63/82 (76.83%), Query Frame = 0
BLAST of MELO3C024535.jh1 vs. ExPASy TrEMBL
Match: A0A1R3IHT9 (LysM domain-containing protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_12057 PE=4 SV=1) HSP 1 Score: 104 bits (259), Expect = 1.05e-26 Identity = 55/90 (61.11%), Postives = 64/90 (71.11%), Query Frame = 0
BLAST of MELO3C024535.jh1 vs. ExPASy TrEMBL
Match: A0A1R3HD93 (LysM domain-containing protein OS=Corchorus olitorius OX=93759 GN=COLO4_29778 PE=4 SV=1) HSP 1 Score: 104 bits (259), Expect = 1.05e-26 Identity = 55/90 (61.11%), Postives = 64/90 (71.11%), Query Frame = 0
BLAST of MELO3C024535.jh1 vs. ExPASy TrEMBL
Match: A0A6P6SRT1 (uncharacterized protein LOC113694046 OS=Coffea arabica OX=13443 GN=LOC113694046 PE=4 SV=1) HSP 1 Score: 103 bits (257), Expect = 2.05e-26 Identity = 56/100 (56.00%), Postives = 69/100 (69.00%), Query Frame = 0
BLAST of MELO3C024535.jh1 vs. TAIR 10
Match: AT4G25433.1 (peptidoglycan-binding LysM domain-containing protein ) HSP 1 Score: 93.6 bits (231), Expect = 1.0e-19 Identity = 41/62 (66.13%), Postives = 52/62 (83.87%), Query Frame = 0
BLAST of MELO3C024535.jh1 vs. TAIR 10
Match: AT5G62150.1 (peptidoglycan-binding LysM domain-containing protein ) HSP 1 Score: 92.4 bits (228), Expect = 2.3e-19 Identity = 40/59 (67.80%), Postives = 48/59 (81.36%), Query Frame = 0
BLAST of MELO3C024535.jh1 vs. TAIR 10
Match: AT3G52790.1 (peptidoglycan-binding LysM domain-containing protein ) HSP 1 Score: 84.3 bits (207), Expect = 6.3e-17 Identity = 37/48 (77.08%), Postives = 44/48 (91.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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