MELO3C024506 (gene) Melon (DHL92) v4

Overview


Name	MELO3C024506
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	60S ribosomal protein L24
Location	chr08: 8836752 .. 8838479 (-)
RNA-Seq Expression	MELO3C024506
Synteny	MELO3C024506

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCTCGATAGATTTAGTTTCTAGGGTTTCGGCGACCACGAAGAAACGGAGGAGTAAGAACTGCAGCCGCCACCATGGTGTTGAAGTTAGTCTCTATTACAGCTCTTTCTGATTCATAGTTGTATTGATTTCATTTAGTTTTTCGCATTCCTTTTAAGTTTCTTTCGTAATCGATGATTGCATCCATTATGGCGAGATAGAGCTGGATCGATGATACTATAGGTTTTTTTCCTAGGTGAATTTGATATGTAGGTCAGTAGGCTCTTTACGATTGATGGGTTTGAAGAAGTAGTGGCTTATACTGTGAGAATGTGATGACCTGTGGTGGTAGATATGCGTATTTCGTTATTGATTGATTCTGAAATGTAATCTGCCTTGGTAGGACCGAGCTTTGTCGATTCAGTGGTGCGAAGATATATCCCGGTAAAGGAATCAGATTTGTCCGGGCTGATTCACAGGTAATTAATCTGCACAGCCACTGATTGAGTTGGAGTTATAACTGGATAATTTTATTTCTTTCTTTTCTTTTGGTATGATTTATTTAAATTGTAATCTTGTTTGGATTCACTAGGTTTTCCTGTTTGCTAACTCCAAATGCAAGAGGTACTTCCATAACAGACTGAAGCCTTCTAAGCTCACCTGGACAGCAATGTACAGGAAGCAACATAAGAAGGTAAAAAAGAAATTTTAGTTCTGGGATTTTTATTTTTTATGTGTATATTTATAATATTCTGTCATATCGTGTTCTGTTTGCAAGCTTTGATTTTTGACGGGTAATTTTGAAACAGAGTGATTTGTACATTAAGATCATCATTTCTATCATATCGTATTCTGTTTGATAGCTTAGGTTTTGGATGGGTAATTTTAAAACAAAAAGATAGGTCTGTGTTACTTATAGATCATGATTTTTATCAATATAGAGGTTTTCTGTTTTGTGGAAACACAGGCCTAATTATTTGGGGAAATATTTAATGTTTTTTTATTCGTGTAGGACATTGCTCAAGAGGCTGTAAAGAAGAGGAGACGTGCCACCAAAAAACCCTACTCAAGGTCCATTGTTGGTGCTACATTGGAGGTGATCCAAAAGAAGAGATCTGAGAAGCCTGAGGTTCGCGATGCTGCAAGGGAAGCAGCCCTCCGGTACGTGATTGTTCTAAGTGTGAAATATCATCTATCATTTGTATCCTACGTTTCTAACAACCACTAAATAATATATTTATCAATCACATATCTTGTGTTTTTTCTTGGGTGCAGTGAAATTAAGGAGAGAATTAAGAAAACAAAGGATGAAAAGAAGGCAAAGAAAGCAGAAGTGATGGCCAAAACACAGAAGACACAGGGGAAGGGTAACGTTGGTAGGGGAGCTGCACCGAAAGGACCAAAGCTTGGTGGCGGCGGTGGCAAACGTTGAACTCTCTATGCTGTAAGCTAAGAAGAGTAGTAAGCTTTTGATCGTCTTTCAAATAGCAAGCCTGAGTAAAAGATAATGTTTGTTTATTTCCAAAATTTTGAATGGATCAATTATTGCACTTATGTTACAAATATCAGAGTTCTGCATTTTGTTTTCCTGTTAATTTGCATGATTATGAATGATAACTTGACTATGTTCATTAGGGGCATGGTTCTTTTTTAGGAATTTCCATTAAAATTTTATTTGCTTACCTTTTGGATCCGTGAAGTATGGATAAATTATTTGGGCAACACGGATTGTTGTTGAGCACTCTCGCA

mRNA sequence

TCCCTCGATAGATTTAGTTTCTAGGGTTTCGGCGACCACGAAGAAACGGAGGAGTAAGAACTGCAGCCGCCACCATGGTGTTGAAGACCGAGCTTTGTCGATTCAGTGGTGCGAAGATATATCCCGGTAAAGGAATCAGATTTGTCCGGGCTGATTCACAGGTTTTCCTGTTTGCTAACTCCAAATGCAAGAGGTACTTCCATAACAGACTGAAGCCTTCTAAGCTCACCTGGACAGCAATGTACAGGAAGCAACATAAGAAGGACATTGCTCAAGAGGCTGTAAAGAAGAGGAGACGTGCCACCAAAAAACCCTACTCAAGGTCCATTGTTGGTGCTACATTGGAGGTGATCCAAAAGAAGAGATCTGAGAAGCCTGAGGTTCGCGATGCTGCAAGGGAAGCAGCCCTCCGGTACGTGATTGTTCTAAGTGTGAAATATCATCTATCATTTGTATCCTACGTTTCTAACAACCACTAAATAATATATTTATCAATCACATATCTTGTGTTTTTTCTTGGGTGCAGTGAAATTAAGGAGAGAATTAAGAAAACAAAGGATGAAAAGAAGGCAAAGAAAGCAGAAGTGATGGCCAAAACACAGAAGACACAGGGGAAGGGTAACGTTGGTAGGGGAGCTGCACCGAAAGGACCAAAGCTTGGTGGCGGCGGTGGCAAACGTTGAACTCTCTATGCTGTAAGCTAAGAAGAGTAGTAAGCTTTTGATCGTCTTTCAAATAGCAAGCCTGAGTAAAAGATAATGTTTGTTTATTTCCAAAATTTTGAATGGATCAATTATTGCACTTATGTTACAAATATCAGAGTTCTGCATTTTGTTTTCCTGTTAATTTGCATGATTATGAATGATAACTTGACTATGTTCATTAGGGGCATGGTTCTTTTTTAGGAATTTCCATTAAAATTTTATTTGCTTACCTTTTGGATCCGTGAAGTATGGATAAATTATTTGGGCAACACGGATTGTTGTTGAGCACTCTCGCA

Coding sequence (CDS)

ATGGTGTTGAAGACCGAGCTTTGTCGATTCAGTGGTGCGAAGATATATCCCGGTAAAGGAATCAGATTTGTCCGGGCTGATTCACAGGTTTTCCTGTTTGCTAACTCCAAATGCAAGAGGTACTTCCATAACAGACTGAAGCCTTCTAAGCTCACCTGGACAGCAATGTACAGGAAGCAACATAAGAAGGACATTGCTCAAGAGGCTGTAAAGAAGAGGAGACGTGCCACCAAAAAACCCTACTCAAGGTCCATTGTTGGTGCTACATTGGAGGTGATCCAAAAGAAGAGATCTGAGAAGCCTGAGGTTCGCGATGCTGCAAGGGAAGCAGCCCTCCGGTACGTGATTGTTCTAAGTGTGAAATATCATCTATCATTTGTATCCTACGTTTCTAACAACCACTAA

Protein sequence

MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALRYVIVLSVKYHLSFVSYVSNNH

Homology

[Close]

BLAST of MELO3C024506 vs. NCBI nr
Match: XP_008462521.1 (PREDICTED: 60S ribosomal protein L24 [Cucumis melo] >XP_038881281.1 60S ribosomal protein L24 [Benincasa hispida] >KAA0025300.1 60S ribosomal protein L24 [Cucumis melo var. makuwa] >TYK07368.1 60S ribosomal protein L24 [Cucumis melo var. makuwa])

HSP 1 Score: 223.4 bits (568), Expect = 1.2e-54
Identity = 113/115 (98.26%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 1   MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60
           MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60

Query: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALRYV 116
           HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALR +
Sbjct: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREI 115

[Close]

BLAST of MELO3C024506 vs. NCBI nr
Match: XP_004143295.1 (60S ribosomal protein L24 [Cucumis sativus] >KGN48224.1 hypothetical protein Csa_003063 [Cucumis sativus])

HSP 1 Score: 222.2 bits (565), Expect = 2.6e-54
Identity = 112/115 (97.39%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 1   MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60
           MVLKTELCRFSGAKIYPG+GIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGRGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60

Query: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALRYV 116
           HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALR +
Sbjct: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREI 115

[Close]

BLAST of MELO3C024506 vs. NCBI nr
Match: XP_004137862.1 (60S ribosomal protein L24 [Cucumis sativus] >KGN59041.1 hypothetical protein Csa_002195 [Cucumis sativus])

HSP 1 Score: 222.2 bits (565), Expect = 2.6e-54
Identity = 112/115 (97.39%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 1   MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60
           MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60

Query: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALRYV 116
           HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKR+EKPEVRDAAREAALR +
Sbjct: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREI 115

[Close]

BLAST of MELO3C024506 vs. NCBI nr
Match: TYJ12607.1 (hypothetical protein E1A91_A11G363400v1 [Gossypium mustelinum])

HSP 1 Score: 221.9 bits (564), Expect = 3.4e-54
Identity = 111/115 (96.52%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 1   MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60
           MVLKTELCRFSGAKIYPGKGIRF+R+DSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60

Query: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALRYV 116
           HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALR +
Sbjct: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREI 115

[Close]

BLAST of MELO3C024506 vs. NCBI nr
Match: XP_022743685.1 (60S ribosomal protein L24 isoform X2 [Durio zibethinus])

HSP 1 Score: 221.9 bits (564), Expect = 3.4e-54
Identity = 111/118 (94.07%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 1   MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60
           MVLKTELCRFSGAKIYPGKGIRFVR+DSQVFLF+NSKCKRYFHNRLKPSKLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGKGIRFVRSDSQVFLFSNSKCKRYFHNRLKPSKLTWTAMYRKQ 60

Query: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALRYVIVL 119
           HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALR ++ +
Sbjct: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALRNILFI 118

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BLAST of MELO3C024506 vs. ExPASy Swiss-Prot
Match: Q9FUL4 (60S ribosomal protein L24 OS=Prunus avium OX=42229 GN=RPL24 PE=2 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 6.4e-56
Identity = 108/115 (93.91%), Postives = 113/115 (98.26%), Query Frame = 0


Query: 1   MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60
           MVLKTELCRFSGAKIYPGKGIRF+R+DSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60

Query: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALRYV 116
           HKKDIAQEAVKKRRR TKKPYSRSIVGATLEVIQK+R+EKPEVRDAAREAALR +
Sbjct: 61  HKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREI 115

[Close]

BLAST of MELO3C024506 vs. ExPASy Swiss-Prot
Match: O65743 (60S ribosomal protein L24 OS=Cicer arietinum OX=3827 GN=RPL24 PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 9.3e-55
Identity = 106/115 (92.17%), Postives = 111/115 (96.52%), Query Frame = 0


Query: 1   MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60
           MVLKTELCRFSGAKIYPG+GIRF+R DSQVFLF NSKCKRYFHNRLKPSKLTWTAM+RKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQ 60

Query: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALRYV 116
           HKKD AQEAVKKRRRATKKPYSRSIVGATLEVIQKKR+EKPEVRDAAREAALR +
Sbjct: 61  HKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREI 115

[Close]

BLAST of MELO3C024506 vs. ExPASy Swiss-Prot
Match: P38666 (60S ribosomal protein L24-2 OS=Arabidopsis thaliana OX=3702 GN=RPL24B PE=1 SV=2)

HSP 1 Score: 209.5 bits (532), Expect = 2.3e-53
Identity = 103/115 (89.57%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60
           MVLKTELCRFSG KIYPG+GIRF+R+DSQVFLF NSKCKRYFHN+LKPSKL WTAMYRKQ
Sbjct: 1   MVLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLAWTAMYRKQ 60

Query: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALRYV 116
           HKKD AQEAVK+RRRATKKPYSRSIVGATLEVIQKKR+EKPEVRDAAREAALR +
Sbjct: 61  HKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREI 115

[Close]

BLAST of MELO3C024506 vs. ExPASy Swiss-Prot
Match: Q42347 (60S ribosomal protein L24-1 OS=Arabidopsis thaliana OX=3702 GN=RPL24A PE=1 SV=2)

HSP 1 Score: 209.1 bits (531), Expect = 3.0e-53
Identity = 103/115 (89.57%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60
           MVLKTELCRFSG KIYPG+GIRF+R+DSQVFLF NSKCKRYFHN+LKPSKL WTAMYRKQ
Sbjct: 1   MVLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLCWTAMYRKQ 60

Query: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALRYV 116
           HKKD AQEAVK+RRRATKKPYSRSIVGATLEVIQKKR+EKPEVRDAAREAALR +
Sbjct: 61  HKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREI 115

[Close]

BLAST of MELO3C024506 vs. ExPASy Swiss-Prot
Match: P50888 (60S ribosomal protein L24 OS=Hordeum vulgare OX=4513 GN=RPL24 PE=2 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 8.7e-53
Identity = 103/115 (89.57%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 1   MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60
           MVLKTELCRFSG KIYPGKGIRF+R+DSQVFLFANSKCKRYFHNRLKP+KL WTAMYRKQ
Sbjct: 1   MVLKTELCRFSGQKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPAKLCWTAMYRKQ 60

Query: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALRYV 116
           HKKDI  EA KKRRR TKKPYSRSIVGATLEVIQKKR+EKPEVRDAAREAALR +
Sbjct: 61  HKKDIHAEAAKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREI 115

[Close]

BLAST of MELO3C024506 vs. ExPASy TrEMBL
Match: A0A5D3C883 (60S ribosomal protein L24 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00880 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 5.7e-55
Identity = 113/115 (98.26%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 1   MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60
           MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60

Query: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALRYV 116
           HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALR +
Sbjct: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREI 115

[Close]

BLAST of MELO3C024506 vs. ExPASy TrEMBL
Match: A0A1S3CH43 (60S ribosomal protein L24 OS=Cucumis melo OX=3656 GN=LOC103500860 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 5.7e-55
Identity = 113/115 (98.26%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 1   MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60
           MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60

Query: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALRYV 116
           HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALR +
Sbjct: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREI 115

[Close]

BLAST of MELO3C024506 vs. ExPASy TrEMBL
Match: A0A0A0KHD4 (TRASH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G449310 PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.3e-54
Identity = 112/115 (97.39%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 1   MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60
           MVLKTELCRFSGAKIYPG+GIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGRGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60

Query: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALRYV 116
           HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALR +
Sbjct: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREI 115

[Close]

BLAST of MELO3C024506 vs. ExPASy TrEMBL
Match: A0A0A0LGG6 (TRASH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G748210 PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.3e-54
Identity = 112/115 (97.39%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 1   MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60
           MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60

Query: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALRYV 116
           HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKR+EKPEVRDAAREAALR +
Sbjct: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREI 115

[Close]

BLAST of MELO3C024506 vs. ExPASy TrEMBL
Match: A0A5D2XF08 (TRASH domain-containing protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A11G363400v1 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.6e-54
Identity = 111/115 (96.52%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 1   MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60
           MVLKTELCRFSGAKIYPGKGIRF+R+DSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60

Query: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALRYV 116
           HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALR +
Sbjct: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREI 115

[Close]

BLAST of MELO3C024506 vs. TAIR 10
Match: AT3G53020.1 (Ribosomal protein L24e family protein )

HSP 1 Score: 209.5 bits (532), Expect = 1.6e-54
Identity = 103/115 (89.57%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60
           MVLKTELCRFSG KIYPG+GIRF+R+DSQVFLF NSKCKRYFHN+LKPSKL WTAMYRKQ
Sbjct: 1   MVLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLAWTAMYRKQ 60

Query: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALRYV 116
           HKKD AQEAVK+RRRATKKPYSRSIVGATLEVIQKKR+EKPEVRDAAREAALR +
Sbjct: 61  HKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREI 115

[Close]

BLAST of MELO3C024506 vs. TAIR 10
Match: AT2G36620.1 (ribosomal protein L24 )

HSP 1 Score: 209.1 bits (531), Expect = 2.1e-54
Identity = 103/115 (89.57%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60
           MVLKTELCRFSG KIYPG+GIRF+R+DSQVFLF NSKCKRYFHN+LKPSKL WTAMYRKQ
Sbjct: 1   MVLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLCWTAMYRKQ 60

Query: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALRYV 116
           HKKD AQEAVK+RRRATKKPYSRSIVGATLEVIQKKR+EKPEVRDAAREAALR +
Sbjct: 61  HKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREI 115

[Close]

BLAST of MELO3C024506 vs. TAIR 10
Match: AT2G44860.1 (Ribosomal protein L24e family protein )

HSP 1 Score: 70.9 bits (172), Expect = 9.0e-13
Identity = 37/97 (38.14%), Postives = 55/97 (56.70%), Query Frame = 0


Query: 3  LKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHK 62
          ++ E C F  + IYPG GI+FVR D+++F F  SKC + F  +  P K+ WT  +R  H 
Sbjct: 1  MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAFRAAHG 60

Query: 63 KDIAQEAV----KKRRRATKKPYSRSIVGATLEVIQK 96
          KD+ ++      KKR R  +  Y R++   TL  I+K
Sbjct: 61 KDMTKDTTFEFEKKRNRPER--YDRNVTENTLMAIKK 95

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BLAST of MELO3C024506 vs. TAIR 10
Match: AT2G44860.2 (Ribosomal protein L24e family protein )

HSP 1 Score: 70.9 bits (172), Expect = 9.0e-13
Identity = 37/97 (38.14%), Postives = 55/97 (56.70%), Query Frame = 0


Query: 3  LKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHK 62
          ++ E C F  + IYPG GI+FVR D+++F F  SKC + F  +  P K+ WT  +R  H 
Sbjct: 1  MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAFRAAHG 60

Query: 63 KDIAQEAV----KKRRRATKKPYSRSIVGATLEVIQK 96
          KD+ ++      KKR R  +  Y R++   TL  I+K
Sbjct: 61 KDMTKDTTFEFEKKRNRPER--YDRNVTENTLMAIKK 95

The following BLAST results are available for this feature:

BLAST of MELO3C024506 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462521.1	1.2e-54	98.26	PREDICTED: 60S ribosomal protein L24 [Cucumis melo] >XP_038881281.1 60S ribosoma...	[more]
XP_004143295.1	2.6e-54	97.39	60S ribosomal protein L24 [Cucumis sativus] >KGN48224.1 hypothetical protein Csa...	[more]
XP_004137862.1	2.6e-54	97.39	60S ribosomal protein L24 [Cucumis sativus] >KGN59041.1 hypothetical protein Csa...	[more]
TYJ12607.1	3.4e-54	96.52	hypothetical protein E1A91_A11G363400v1 [Gossypium mustelinum]	[more]
XP_022743685.1	3.4e-54	94.07	60S ribosomal protein L24 isoform X2 [Durio zibethinus]	[more]

BLAST of MELO3C024506 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FUL4	6.4e-56	93.91	60S ribosomal protein L24 OS=Prunus avium OX=42229 GN=RPL24 PE=2 SV=1	[more]
O65743	9.3e-55	92.17	60S ribosomal protein L24 OS=Cicer arietinum OX=3827 GN=RPL24 PE=2 SV=1	[more]
P38666	2.3e-53	89.57	60S ribosomal protein L24-2 OS=Arabidopsis thaliana OX=3702 GN=RPL24B PE=1 SV=2	[more]
Q42347	3.0e-53	89.57	60S ribosomal protein L24-1 OS=Arabidopsis thaliana OX=3702 GN=RPL24A PE=1 SV=2	[more]
P50888	8.7e-53	89.57	60S ribosomal protein L24 OS=Hordeum vulgare OX=4513 GN=RPL24 PE=2 SV=1	[more]

BLAST of MELO3C024506 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C883	5.7e-55	98.26	60S ribosomal protein L24 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3CH43	5.7e-55	98.26	60S ribosomal protein L24 OS=Cucumis melo OX=3656 GN=LOC103500860 PE=3 SV=1	[more]
A0A0A0KHD4	1.3e-54	97.39	TRASH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G449310 PE=3 ...	[more]
A0A0A0LGG6	1.3e-54	97.39	TRASH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G748210 PE=3 ...	[more]
A0A5D2XF08	1.6e-54	96.52	TRASH domain-containing protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A11G36...	[more]

BLAST of MELO3C024506 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53020.1	1.6e-54	89.57	Ribosomal protein L24e family protein	[more]
AT2G36620.1	2.1e-54	89.57	ribosomal protein L24	[more]
AT2G44860.1	9.0e-13	38.14	Ribosomal protein L24e family protein	[more]
AT2G44860.2	9.0e-13	38.14	Ribosomal protein L24e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011017	TRASH domain	SMART	SM00746	4TRASH	coord: 8..46 e-value: 4.1E-4 score: 29.7
IPR038630	Ribosomal protein L24e/L24 superfamily	GENE3D	2.30.170.20	Ribosomal protein L24e	coord: 3..64 e-value: 5.9E-34 score: 118.1
None	No IPR available	GENE3D	6.10.250.1270		coord: 69..115 e-value: 9.5E-17 score: 62.9
None	No IPR available	PANTHER	PTHR10792:SF35	OS05G0486700 PROTEIN	coord: 1..115
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 6..58
IPR000988	Ribosomal protein L24e-related	PFAM	PF01246	Ribosomal_L24e	coord: 3..67 e-value: 5.0E-29 score: 100.4
IPR000988	Ribosomal protein L24e-related	PANTHER	PTHR10792	60S RIBOSOMAL PROTEIN L24	coord: 1..115
IPR000988	Ribosomal protein L24e-related	CDD	cd00472	Ribosomal_L24e_L24	coord: 3..56 e-value: 8.11763E-21 score: 77.6126
IPR023442	Ribosomal protein L24e, conserved site	PROSITE	PS01073	RIBOSOMAL_L24E	coord: 10..27

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C024506.1	MELO3C024506.1	mRNA