MELO3C024497.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C024497.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Threonine dehydratase
Location	chr08: 8735038 .. 8741020 (-)
RNA-Seq Expression	MELO3C024497.jh1
Synteny	MELO3C024497.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAATCTTCCCAAAGAAGCATTAGAAAGCGGAGTCATTTGTGCTTCAGCTGGAAATCATGCACAAGGAGTTGCATTAGCTGCTGGAAGATTAAGAACTGAGGCCGTCATCGTCATGCCTCGTTCCACTCCTCCAATTAAGGTCACACTCTTTTTTTTAATTACGACTTAAAAGTTACAAAATTATTTCACGAAGTTTGAAGCTGCAGCTGTCAGAGAAAAACAGACATTTGTTCCCTTACATTTTAAAACATTACAGATAGACGCAGTTCGGAGTTTAGGTGGAAATGTTGTTTTACACGGAGATACTTTTGATGACGCGCAAGAATATGCTCAACAACTGAGAAAAGTACGTAACCTTACAATCATCCCTCCTTTCGATAACGAAAATGTCATTATAGGTCAAGGAACAGTTGGAATGGAAATTGGACGTCAAATGAGAGGTCCATTACATGCAATTTTTGTCCCGGTCGGGGGTGGCGGTCTTCTAGCCGGTGTTGCTTCATTTTACTAGCTAGTTTTTCCTGAGGTAAAAGCTCAGTTGTTCCTGTCTGTATTAAACATTTAG

mRNA sequence

ATGGCCAATCTTCCCAAAGAAGCATTAGAAAGCGGAGTCATTTGTGCTTCAGCTGGAAATCATGCACAAGGAGTTGCATTAGCTGCTGGAAGATTAAGAACTGAGGCCGTCATCGTCATGCCTCGTTCCACTCCTCCAATTAAGATAGACGCAGTTCGGAGTTTAGGTGGAAATGTTGTTTTACACGGAGATACTTTTGATGACGCGCAAGAATATGCTCAACAACTGAGAAAAGTACGTAACCTTACAATCATCCCTCCTTTCGATAACGAAAATGTCATTATAGGTCAAGGAACAGTTGGAATGGAAATTGGACGTCAAATGAGAGGTCCATTACATGCAATTTTTGTCCCGGTCGGGGGTGGCGGTCTTCTAGCCGGTGTTGCTTCATTTTACTAGCTAGTTTTTCCTGAGGTAAAAGCTCAGTTGTTCCTGTCTGTATTAAACATTTAG

Coding sequence (CDS)

ATGGCCAATCTTCCCAAAGAAGCATTAGAAAGCGGAGTCATTTGTGCTTCAGCTGGAAATCATGCACAAGGAGTTGCATTAGCTGCTGGAAGATTAAGAACTGAGGCCGTCATCGTCATGCCTCGTTCCACTCCTCCAATTAAGATAGACGCAGTTCGGAGTTTAGGTGGAAATGTTGTTTTACACGGAGATACTTTTGATGACGCGCAAGAATATGCTCAACAACTGAGAAAAGTACGTAACCTTACAATCATCCCTCCTTTCGATAACGAAAATGTCATTATAGGTCAAGGAACAGTTGGAATGGAAATTGGACGTCAAATGAGAGGTCCATTACATGCAATTTTTGTCCCGGTCGGGGGTGGCGGTCTTCTAGCCGGTGTTGCTTCATTTTACTAG

Protein sequence

MANLPKEALESGVICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPIKIDAVRSLGGNVVLHGDTFDDAQEYAQQLRKVRNLTIIPPFDNENVIIGQGTVGMEIGRQMRGPLHAIFVPVGGGGLLAGVASFY

Homology

[Close]

BLAST of MELO3C024497.jh1 vs. NCBI nr
Match: XP_004143369.1 (threonine dehydratase biosynthetic, chloroplastic [Cucumis sativus] >KGN48214.1 hypothetical protein Csa_003609 [Cucumis sativus])

HSP 1 Score: 444 bits (1142), Expect = 1.09e-150
Identity = 223/239 (93.31%), Postives = 232/239 (97.07%), Query Frame = 0


Query: 24  NNNNTKTNAVVDGSIASVTGVPEVSWKDLQYPAGMLGAIPKRPEVIDERRQMKYLKNILS 83
           +NNNTKTNAVVDGSIA VTGVPEVSWKDLQYPAGMLGAIPKRPEVIDERRQM+YL NILS
Sbjct: 67  SNNNTKTNAVVDGSIAIVTGVPEVSWKDLQYPAGMLGAIPKRPEVIDERRQMEYLTNILS 126

Query: 84  SKVYDVAIESPLELTRKLSTQLGINLWLKRDDSQYVFSFKIRGAYNMMANLPKEALESGV 143
           SKVYDVAIESPLEL RKLSTQLGI LWLKRDDSQ+VFSFKIRGAYNMMANLPKEALE GV
Sbjct: 127 SKVYDVAIESPLELARKLSTQLGIQLWLKRDDSQFVFSFKIRGAYNMMANLPKEALERGV 186

Query: 144 ICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPIKIDAVRSLGGNVVLHGDTFDDAQEYA 203
           ICASAGNHAQGVALAAGRLRTEA+IVMPRSTPPIKI+AVRSLGGNV+LHGDTFDDAQE+A
Sbjct: 187 ICASAGNHAQGVALAAGRLRTEAIIVMPRSTPPIKIEAVRSLGGNVLLHGDTFDDAQEHA 246

Query: 204 QQLRKVRNLTIIPPFDNENVIIGQGTVGMEIGRQMRGPLHAIFVPVGGGGLLAGVASFY 262
           +QL K RNLTIIPPFDNE+VIIGQGTVGMEIGRQMRGPLHAIFVPVGGGGLLAGVASFY
Sbjct: 247 RQLSKERNLTIIPPFDNEDVIIGQGTVGMEIGRQMRGPLHAIFVPVGGGGLLAGVASFY 305

[Close]

BLAST of MELO3C024497.jh1 vs. NCBI nr
Match: KAA0025315.1 (threonine dehydratase biosynthetic [Cucumis melo var. makuwa])

HSP 1 Score: 428 bits (1100), Expect = 9.33e-148
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 24  NNNNTKTNAVVDGSIASVTGVPEVSWKDLQYPAGMLGAIPKRPEVIDERRQMKYLKNILS 83
           NNNNTKTNAVVDGSIASVTGVPEVSWKDLQYPAGMLGAIPKRPEVIDERRQMKYLKNILS
Sbjct: 46  NNNNTKTNAVVDGSIASVTGVPEVSWKDLQYPAGMLGAIPKRPEVIDERRQMKYLKNILS 105

Query: 84  SKVYDVAIESPLELTRKLSTQLGINLWLKRDDSQYVFSFKIRGAYNMMANLPKEALESGV 143
           SKVYDVAIESPLELTRKLSTQLGINLWLKRDDSQYVFSFKIRGAYNMMANLPKEALESGV
Sbjct: 106 SKVYDVAIESPLELTRKLSTQLGINLWLKRDDSQYVFSFKIRGAYNMMANLPKEALESGV 165

Query: 144 ICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPIKIDAVRSLGGNVVLHGDTFDDAQEYA 203
           ICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPIKIDAVRSLGGNVVLHGDTFDDAQEYA
Sbjct: 166 ICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPIKIDAVRSLGGNVVLHGDTFDDAQEYA 225

Query: 204 QQLRKVRNLTIIPPFDNENVIIGQGTVGMEIGRQMR 239
           QQLRKVRNLTIIPPFDNENVIIGQGTVGMEIGRQMR
Sbjct: 226 QQLRKVRNLTIIPPFDNENVIIGQGTVGMEIGRQMR 261

[Close]

BLAST of MELO3C024497.jh1 vs. NCBI nr
Match: TYK07356.1 (threonine dehydratase biosynthetic [Cucumis melo var. makuwa])

HSP 1 Score: 356 bits (914), Expect = 1.15e-120
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 58  MLGAIPKRPEVIDERRQMKYLKNILSSKVYDVAIESPLELTRKLSTQLGINLWLKRDDSQ 117
           MLGAIPKRPEVIDERRQMKYLKNILSSKVYDVAIESPLELTRKLSTQLGINLWLKRDDSQ
Sbjct: 1   MLGAIPKRPEVIDERRQMKYLKNILSSKVYDVAIESPLELTRKLSTQLGINLWLKRDDSQ 60

Query: 118 YVFSFKIRGAYNMMANLPKEALESGVICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPI 177
           YVFSFKIRGAYNMMANLPKEALESGVICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPI
Sbjct: 61  YVFSFKIRGAYNMMANLPKEALESGVICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPI 120

Query: 178 KIDAVRSLGGNVVLHGDTFDDAQEYAQQLRKVRNLTIIPPFDNENVIIGQGTVGMEIGRQ 237
           KIDAVRSLGGNVVLHGDTFDDAQEYAQQLRKVRNLTIIPPFDNENVIIGQGTVGMEIGRQ
Sbjct: 121 KIDAVRSLGGNVVLHGDTFDDAQEYAQQLRKVRNLTIIPPFDNENVIIGQGTVGMEIGRQ 180

Query: 238 MR 239
            R
Sbjct: 181 TR 182

[Close]

BLAST of MELO3C024497.jh1 vs. NCBI nr
Match: XP_008465584.1 (PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Cucumis melo])

HSP 1 Score: 332 bits (851), Expect = 2.90e-108
Identity = 161/219 (73.52%), Postives = 191/219 (87.21%), Query Frame = 0


Query: 44  VPEVSWKDLQYPAGMLGAIPKRPEVIDERRQMKYLKNILSSKVYDVAIESPLELTRKLST 103
           +P VSWK+LQYP+G LGA+PKRPEVIDE++QM+YLK ILSSKVYDV  ESPL     LS 
Sbjct: 34  IPAVSWKELQYPSGKLGAVPKRPEVIDEQKQMEYLKKILSSKVYDVTSESPLHFAPNLSK 93

Query: 104 QLGINLWLKRDDSQYVFSFKIRGAYNMMANLPKEALESGVICASAGNHAQGVALAAGRLR 163
            LG+N+WLKR+D+  V+SFK+RGAYNMM++LPKE LE GVI AS GNHAQGVA AA +L+
Sbjct: 94  GLGVNIWLKREDTHPVYSFKLRGAYNMMSSLPKEELEKGVISASTGNHAQGVAFAASKLK 153

Query: 164 TEAVIVMPRSTPPIKIDAVRSLGGNVVLHGDTFDDAQEYAQQLRKVRNLTIIPPFDNENV 223
           T+++IVMPRSTPP KI+AV++LGGNVVL GDTFDDA E+A+QL + RNL IIPPFD+E++
Sbjct: 154 TQSLIVMPRSTPPNKIEAVKNLGGNVVLFGDTFDDALEHAKQLSQERNLKIIPPFDDEDI 213

Query: 224 IIGQGTVGMEIGRQMRGPLHAIFVPVGGGGLLAGVASFY 262
           I+GQGTVGMEIGRQMR PL AIFVPVGGGGLLAGVASFY
Sbjct: 214 IVGQGTVGMEIGRQMREPLDAIFVPVGGGGLLAGVASFY 252

[Close]

BLAST of MELO3C024497.jh1 vs. NCBI nr
Match: KAA0025314.1 (threonine dehydratase biosynthetic [Cucumis melo var. makuwa])

HSP 1 Score: 332 bits (852), Expect = 3.54e-107
Identity = 160/219 (73.06%), Postives = 191/219 (87.21%), Query Frame = 0


Query: 44  VPEVSWKDLQYPAGMLGAIPKRPEVIDERRQMKYLKNILSSKVYDVAIESPLELTRKLST 103
           +P VSWK+LQYP+G LGA+PKRPEVIDE++QM+YLK ILSSKVYDV  ESPL     LS 
Sbjct: 74  IPVVSWKELQYPSGKLGAVPKRPEVIDEQKQMEYLKKILSSKVYDVTSESPLHFAPNLSK 133

Query: 104 QLGINLWLKRDDSQYVFSFKIRGAYNMMANLPKEALESGVICASAGNHAQGVALAAGRLR 163
            LG+N+WLKR+D+  V+SFK+RGAYNMM++LPKE LE GVICAS+GNHAQGVA AA +L+
Sbjct: 134 GLGVNIWLKREDTHPVYSFKLRGAYNMMSSLPKEELEKGVICASSGNHAQGVAFAASKLK 193

Query: 164 TEAVIVMPRSTPPIKIDAVRSLGGNVVLHGDTFDDAQEYAQQLRKVRNLTIIPPFDNENV 223
           T++++VMPRSTPP KI+AV++LGGNVVL GDTFDDA E+A+QL   RNL IIPPFD+E++
Sbjct: 194 TQSLVVMPRSTPPNKIEAVKNLGGNVVLFGDTFDDALEHAKQLSLERNLKIIPPFDDEDI 253

Query: 224 IIGQGTVGMEIGRQMRGPLHAIFVPVGGGGLLAGVASFY 262
           I+GQGTVGMEIG QMR PL AIFVPVGGGGLLAGVASFY
Sbjct: 254 IVGQGTVGMEIGHQMREPLDAIFVPVGGGGLLAGVASFY 292

[Close]

BLAST of MELO3C024497.jh1 vs. ExPASy Swiss-Prot
Match: Q9ZSS6 (Threonine dehydratase biosynthetic, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OMR1 PE=1 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 3.1e-70
Identity = 134/219 (61.19%), Postives = 167/219 (76.26%), Query Frame = 0


Query: 46  EVSWKDLQYPAGMLGAIPKRPEVIDE---RRQMKYLKNILSSKVYDVAIESPLELTRKLS 105
           +VS   LQYPAG LGA+P+R    +       M+YL NILS+KVYD+AIESPL+L +KLS
Sbjct: 61  KVSPNSLQYPAGYLGAVPERTNEAENGSIAEAMEYLTNILSTKVYDIAIESPLQLAKKLS 120

Query: 106 TQLGINLWLKRDDSQYVFSFKIRGAYNMMANLPKEALESGVICASAGNHAQGVALAAGRL 165
            +LG+ ++LKR+D Q VFSFK+RGAYNMM  LP + L  GVIC+SAGNHAQGVAL+A +L
Sbjct: 121 KRLGVRMYLKREDLQPVFSFKLRGAYNMMVKLPADQLAKGVICSSAGNHAQGVALSASKL 180

Query: 166 RTEAVIVMPRSTPPIKIDAVRSLGGNVVLHGDTFDDAQEYAQQLRKVRNLTIIPPFDNEN 225
              AVIVMP +TP IK  AV +LG  VVL GD++D AQ +A+   +   LT IPPFD+ +
Sbjct: 181 GCTAVIVMPVTTPEIKWQAVENLGATVVLFGDSYDQAQAHAKIRAEEEGLTFIPPFDHPD 240

Query: 226 VIIGQGTVGMEIGRQMRGPLHAIFVPVGGGGLLAGVASF 262
           VI GQGTVGMEI RQ +GPLHAIFVPVGGGGL+AG+A++
Sbjct: 241 VIAGQGTVGMEITRQAKGPLHAIFVPVGGGGLIAGIAAY 279

[Close]

BLAST of MELO3C024497.jh1 vs. ExPASy Swiss-Prot
Match: Q9AXU4 (Threonine dehydratase OS=Nicotiana attenuata OX=49451 GN=TD PE=1 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.0e-65
Identity = 138/269 (51.30%), Postives = 177/269 (65.80%), Query Frame = 0


Query: 5   IQDDASAKSPDFKMLIVVINNNNTKTNAVVDGSIASVTGVP------EVSWKDLQYPAGM 64
           I+  A + +  FK  ++    NN K    +  SI   + +P        S   +  PA +
Sbjct: 23  IRTRAISSNDTFK--VISSTGNNKKMKGAIRTSIPKPSALPLKVSQLSPSADSMPVPASL 82

Query: 65  LGA-----IPKRPEVIDERRQMKYLKNILSSKVYDVAIESPLELTRKLSTQLGINLWLKR 124
                   I   P   D     +YL  IL+S+VYDVAI+SPL+   KLS +LG+N W+KR
Sbjct: 83  QDVEAGKLIENNPSGGDTEELFQYLVEILASRVYDVAIDSPLQNAAKLSKKLGVNFWIKR 142

Query: 125 DDSQYVFSFKIRGAYNMMANLPKEALESGVICASAGNHAQGVALAAGRLRTEAVIVMPRS 184
           +D Q VFSFK+RGAYNMM  L KE LE GVI ASAGNHAQGVAL A RL+  A IVMP +
Sbjct: 143 EDMQSVFSFKLRGAYNMMTKLSKEQLERGVITASAGNHAQGVALGAQRLKCTATIVMPVT 202

Query: 185 TPPIKIDAVRSLGGNVVLHGDTFDDAQEYAQQLRKVRNLTIIPPFDNENVIIGQGTVGME 244
           TP IKI+AV++L G VVLHGDTFD AQE+A +L +   LT IPPFD+ +VIIGQGT+G E
Sbjct: 203 TPEIKIEAVKNLDGKVVLHGDTFDKAQEHALKLAEDEGLTFIPPFDHPDVIIGQGTIGTE 262

Query: 245 IGRQMRGPLHAIFVPVGGGGLLAGVASFY 263
           I RQ++  +HA+FVPVGGGGL+AGVA+++
Sbjct: 263 INRQLK-DIHAVFVPVGGGGLIAGVAAYF 288

[Close]

BLAST of MELO3C024497.jh1 vs. ExPASy Swiss-Prot
Match: A0FKE6 (Threonine dehydratase 1 biosynthetic, chloroplastic OS=Solanum lycopersicum OX=4081 GN=TD1 PE=1 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 2.3e-65
Identity = 123/186 (66.13%), Postives = 152/186 (81.72%), Query Frame = 0


Query: 76  KYLKNILSSKVYDVAIESPLELTRKLSTQLGINLWLKRDDSQYVFSFKIRGAYNMMANLP 135
           +YL NILSSKVYDVA E+PL+   KLS +LG+N+WLKR+D Q VFSFKIRGAYNMMA LP
Sbjct: 107 EYLTNILSSKVYDVAYETPLQKAPKLSERLGVNVWLKREDLQPVFSFKIRGAYNMMAKLP 166

Query: 136 KEALESGVICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPIKIDAVRSLGGNVVLHGDT 195
           KE LE GVIC+SAGNHAQGVAL+A RL  +AVIVMP +TP IK  +V+ LG  VVL GD+
Sbjct: 167 KEQLEKGVICSSAGNHAQGVALSAQRLGCDAVIVMPVTTPDIKWKSVKRLGATVVLVGDS 226

Query: 196 FDDAQEYAQQLRKVRNLTIIPPFDNENVIIGQGTVGMEIGRQMRGPLHAIFVPVGGGGLL 255
           +D+AQ YA++  +    T IPPFD+ +VI+GQGTVGMEI RQ++  +HAIFVPVGGGGL+
Sbjct: 227 YDEAQAYAKKRAESEGRTFIPPFDHPDVIVGQGTVGMEINRQLKDNIHAIFVPVGGGGLI 286

Query: 256 AGVASF 262
           AG+A++
Sbjct: 287 AGIAAY 292

[Close]

BLAST of MELO3C024497.jh1 vs. ExPASy Swiss-Prot
Match: P25306 (Threonine dehydratase 2 biosynthetic, chloroplastic OS=Solanum lycopersicum OX=4081 GN=TD2 PE=1 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.9e-64
Identity = 128/230 (55.65%), Postives = 167/230 (72.61%), Query Frame = 0


Query: 38  IASVTGVPEVSWKDLQYPAGMLGAIP-----KRPEVIDERRQMKYLKNILSSKVYDVAIE 97
           ++ +  VP+++      PA +   +P      +P   D     +YL +IL+S VYDVAIE
Sbjct: 53  MSPIVSVPDITAPVENVPAILPKVVPGELIVNKPTGGDSDELFQYLVDILASPVYDVAIE 112

Query: 98  SPLELTRKLSTQLGINLWLKRDDSQYVFSFKIRGAYNMMANLPKEALESGVICASAGNHA 157
           SPLEL  KLS +LG+N ++KR+D Q VFSFK+RGAYNMM+NL +E L+ GVI ASAGNHA
Sbjct: 113 SPLELAEKLSDRLGVNFYIKREDKQRVFSFKLRGAYNMMSNLSREELDKGVITASAGNHA 172

Query: 158 QGVALAAGRLRTEAVIVMPRSTPPIKIDAVRSLGGNVVLHGDTFDDAQEYAQQLRKVRNL 217
           QGVALA  RL   A IVMP +TP IKIDAVR+LGG+VVL+G TFD+AQ +A +L +   L
Sbjct: 173 QGVALAGQRLNCVAKIVMPTTTPQIKIDAVRALGGDVVLYGKTFDEAQTHALELSEKDGL 232

Query: 218 TIIPPFDNENVIIGQGTVGMEIGRQMRGPLHAIFVPVGGGGLLAGVASFY 263
             IPPFD+  VI GQGT+G EI RQ++  +HA+F+PVGGGGL+AGVA+F+
Sbjct: 233 KYIPPFDDPGVIKGQGTIGTEINRQLK-DIHAVFIPVGGGGLIAGVATFF 281

[Close]

BLAST of MELO3C024497.jh1 vs. ExPASy Swiss-Prot
Match: Q39469 (Threonine dehydratase biosynthetic, chloroplastic OS=Cicer arietinum OX=3827 PE=2 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.1e-54
Identity = 117/225 (52.00%), Postives = 157/225 (69.78%), Query Frame = 0


Query: 40  SVTGVPEVSWKDLQYPAGMLGAIPKRPEVIDERRQMKYLKNILSSKVYDVAIESPLELTR 99
           +V GVP V  K +  PA     I  +P   D     +YL+++L S VYDV +ESP+ELT 
Sbjct: 61  NVPGVPGVLRKVV--PA---APIKNKPTCADSDELPEYLRDVLRSPVYDVVVESPVELTE 120

Query: 100 KLSTQLGINLWLKRDDSQYVFSFKIRGAYNMMANLPKEALESGVICASAGNHAQGV--AL 159
           +LS +LG+N ++KR+D Q VFSFK+RG YNMM++L  E ++ GVI ASAGNHAQGV    
Sbjct: 121 RLSDRLGVNFYVKREDRQRVFSFKLRGPYNMMSSLSHEEIDKGVITASAGNHAQGVPFPF 180

Query: 160 AAGRLRTEAVIVMPRSTPPIKIDAVRSLGGNVVLHGDTFDDAQEYAQQLRKVRNLTIIPP 219
              RL+  A IVMP +TP IK+D VR+LG +VVL G TFD+A+ +A +L +   L  IPP
Sbjct: 181 PGRRLKCVAKIVMPTTTPNIKLDGVRALGADVVLWGHTFDEAKTHAVELCEKDGLRTIPP 240

Query: 220 FDNENVIIGQGTVGMEIGRQMRGPLHAIFVPVGGGGLLAGVASFY 263
           F++  VI GQGT+G EI RQ++  + A+FVPVGGGGL+AGVA+F+
Sbjct: 241 FEDPAVIKGQGTIGSEINRQIK-RIDAVFVPVGGGGLIAGVAAFF 279

[Close]

BLAST of MELO3C024497.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KHC3 (Threonine dehydratase OS=Cucumis sativus OX=3659 GN=Csa_6G448720 PE=3 SV=1)

HSP 1 Score: 444 bits (1142), Expect = 5.27e-151
Identity = 223/239 (93.31%), Postives = 232/239 (97.07%), Query Frame = 0


Query: 24  NNNNTKTNAVVDGSIASVTGVPEVSWKDLQYPAGMLGAIPKRPEVIDERRQMKYLKNILS 83
           +NNNTKTNAVVDGSIA VTGVPEVSWKDLQYPAGMLGAIPKRPEVIDERRQM+YL NILS
Sbjct: 67  SNNNTKTNAVVDGSIAIVTGVPEVSWKDLQYPAGMLGAIPKRPEVIDERRQMEYLTNILS 126

Query: 84  SKVYDVAIESPLELTRKLSTQLGINLWLKRDDSQYVFSFKIRGAYNMMANLPKEALESGV 143
           SKVYDVAIESPLEL RKLSTQLGI LWLKRDDSQ+VFSFKIRGAYNMMANLPKEALE GV
Sbjct: 127 SKVYDVAIESPLELARKLSTQLGIQLWLKRDDSQFVFSFKIRGAYNMMANLPKEALERGV 186

Query: 144 ICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPIKIDAVRSLGGNVVLHGDTFDDAQEYA 203
           ICASAGNHAQGVALAAGRLRTEA+IVMPRSTPPIKI+AVRSLGGNV+LHGDTFDDAQE+A
Sbjct: 187 ICASAGNHAQGVALAAGRLRTEAIIVMPRSTPPIKIEAVRSLGGNVLLHGDTFDDAQEHA 246

Query: 204 QQLRKVRNLTIIPPFDNENVIIGQGTVGMEIGRQMRGPLHAIFVPVGGGGLLAGVASFY 262
           +QL K RNLTIIPPFDNE+VIIGQGTVGMEIGRQMRGPLHAIFVPVGGGGLLAGVASFY
Sbjct: 247 RQLSKERNLTIIPPFDNEDVIIGQGTVGMEIGRQMRGPLHAIFVPVGGGGLLAGVASFY 305

[Close]

BLAST of MELO3C024497.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SLH6 (Threonine dehydratase biosynthetic OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G001700 PE=4 SV=1)

HSP 1 Score: 428 bits (1100), Expect = 4.52e-148
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 24  NNNNTKTNAVVDGSIASVTGVPEVSWKDLQYPAGMLGAIPKRPEVIDERRQMKYLKNILS 83
           NNNNTKTNAVVDGSIASVTGVPEVSWKDLQYPAGMLGAIPKRPEVIDERRQMKYLKNILS
Sbjct: 46  NNNNTKTNAVVDGSIASVTGVPEVSWKDLQYPAGMLGAIPKRPEVIDERRQMKYLKNILS 105

Query: 84  SKVYDVAIESPLELTRKLSTQLGINLWLKRDDSQYVFSFKIRGAYNMMANLPKEALESGV 143
           SKVYDVAIESPLELTRKLSTQLGINLWLKRDDSQYVFSFKIRGAYNMMANLPKEALESGV
Sbjct: 106 SKVYDVAIESPLELTRKLSTQLGINLWLKRDDSQYVFSFKIRGAYNMMANLPKEALESGV 165

Query: 144 ICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPIKIDAVRSLGGNVVLHGDTFDDAQEYA 203
           ICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPIKIDAVRSLGGNVVLHGDTFDDAQEYA
Sbjct: 166 ICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPIKIDAVRSLGGNVVLHGDTFDDAQEYA 225

Query: 204 QQLRKVRNLTIIPPFDNENVIIGQGTVGMEIGRQMR 239
           QQLRKVRNLTIIPPFDNENVIIGQGTVGMEIGRQMR
Sbjct: 226 QQLRKVRNLTIIPPFDNENVIIGQGTVGMEIGRQMR 261

[Close]

BLAST of MELO3C024497.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CAJ2 (Threonine dehydratase biosynthetic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00750 PE=4 SV=1)

HSP 1 Score: 356 bits (914), Expect = 5.59e-121
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 58  MLGAIPKRPEVIDERRQMKYLKNILSSKVYDVAIESPLELTRKLSTQLGINLWLKRDDSQ 117
           MLGAIPKRPEVIDERRQMKYLKNILSSKVYDVAIESPLELTRKLSTQLGINLWLKRDDSQ
Sbjct: 1   MLGAIPKRPEVIDERRQMKYLKNILSSKVYDVAIESPLELTRKLSTQLGINLWLKRDDSQ 60

Query: 118 YVFSFKIRGAYNMMANLPKEALESGVICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPI 177
           YVFSFKIRGAYNMMANLPKEALESGVICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPI
Sbjct: 61  YVFSFKIRGAYNMMANLPKEALESGVICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPI 120

Query: 178 KIDAVRSLGGNVVLHGDTFDDAQEYAQQLRKVRNLTIIPPFDNENVIIGQGTVGMEIGRQ 237
           KIDAVRSLGGNVVLHGDTFDDAQEYAQQLRKVRNLTIIPPFDNENVIIGQGTVGMEIGRQ
Sbjct: 121 KIDAVRSLGGNVVLHGDTFDDAQEYAQQLRKVRNLTIIPPFDNENVIIGQGTVGMEIGRQ 180

Query: 238 MR 239
            R
Sbjct: 181 TR 182

[Close]

BLAST of MELO3C024497.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CP75 (Threonine dehydratase OS=Cucumis melo OX=3656 GN=LOC103503221 PE=3 SV=1)

HSP 1 Score: 332 bits (851), Expect = 1.40e-108
Identity = 161/219 (73.52%), Postives = 191/219 (87.21%), Query Frame = 0


Query: 44  VPEVSWKDLQYPAGMLGAIPKRPEVIDERRQMKYLKNILSSKVYDVAIESPLELTRKLST 103
           +P VSWK+LQYP+G LGA+PKRPEVIDE++QM+YLK ILSSKVYDV  ESPL     LS 
Sbjct: 34  IPAVSWKELQYPSGKLGAVPKRPEVIDEQKQMEYLKKILSSKVYDVTSESPLHFAPNLSK 93

Query: 104 QLGINLWLKRDDSQYVFSFKIRGAYNMMANLPKEALESGVICASAGNHAQGVALAAGRLR 163
            LG+N+WLKR+D+  V+SFK+RGAYNMM++LPKE LE GVI AS GNHAQGVA AA +L+
Sbjct: 94  GLGVNIWLKREDTHPVYSFKLRGAYNMMSSLPKEELEKGVISASTGNHAQGVAFAASKLK 153

Query: 164 TEAVIVMPRSTPPIKIDAVRSLGGNVVLHGDTFDDAQEYAQQLRKVRNLTIIPPFDNENV 223
           T+++IVMPRSTPP KI+AV++LGGNVVL GDTFDDA E+A+QL + RNL IIPPFD+E++
Sbjct: 154 TQSLIVMPRSTPPNKIEAVKNLGGNVVLFGDTFDDALEHAKQLSQERNLKIIPPFDDEDI 213

Query: 224 IIGQGTVGMEIGRQMRGPLHAIFVPVGGGGLLAGVASFY 262
           I+GQGTVGMEIGRQMR PL AIFVPVGGGGLLAGVASFY
Sbjct: 214 IVGQGTVGMEIGRQMREPLDAIFVPVGGGGLLAGVASFY 252

[Close]

BLAST of MELO3C024497.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SI54 (Threonine dehydratase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G001690 PE=3 SV=1)

HSP 1 Score: 332 bits (852), Expect = 1.71e-107
Identity = 160/219 (73.06%), Postives = 191/219 (87.21%), Query Frame = 0


Query: 44  VPEVSWKDLQYPAGMLGAIPKRPEVIDERRQMKYLKNILSSKVYDVAIESPLELTRKLST 103
           +P VSWK+LQYP+G LGA+PKRPEVIDE++QM+YLK ILSSKVYDV  ESPL     LS 
Sbjct: 74  IPVVSWKELQYPSGKLGAVPKRPEVIDEQKQMEYLKKILSSKVYDVTSESPLHFAPNLSK 133

Query: 104 QLGINLWLKRDDSQYVFSFKIRGAYNMMANLPKEALESGVICASAGNHAQGVALAAGRLR 163
            LG+N+WLKR+D+  V+SFK+RGAYNMM++LPKE LE GVICAS+GNHAQGVA AA +L+
Sbjct: 134 GLGVNIWLKREDTHPVYSFKLRGAYNMMSSLPKEELEKGVICASSGNHAQGVAFAASKLK 193

Query: 164 TEAVIVMPRSTPPIKIDAVRSLGGNVVLHGDTFDDAQEYAQQLRKVRNLTIIPPFDNENV 223
           T++++VMPRSTPP KI+AV++LGGNVVL GDTFDDA E+A+QL   RNL IIPPFD+E++
Sbjct: 194 TQSLVVMPRSTPPNKIEAVKNLGGNVVLFGDTFDDALEHAKQLSLERNLKIIPPFDDEDI 253

Query: 224 IIGQGTVGMEIGRQMRGPLHAIFVPVGGGGLLAGVASFY 262
           I+GQGTVGMEIG QMR PL AIFVPVGGGGLLAGVASFY
Sbjct: 254 IVGQGTVGMEIGHQMREPLDAIFVPVGGGGLLAGVASFY 292

[Close]

BLAST of MELO3C024497.jh1 vs. TAIR 10
Match: AT3G10050.1 (L-O-methylthreonine resistant 1 )

HSP 1 Score: 266.5 bits (680), Expect = 2.2e-71
Identity = 134/219 (61.19%), Postives = 167/219 (76.26%), Query Frame = 0


Query: 46  EVSWKDLQYPAGMLGAIPKRPEVIDE---RRQMKYLKNILSSKVYDVAIESPLELTRKLS 105
           +VS   LQYPAG LGA+P+R    +       M+YL NILS+KVYD+AIESPL+L +KLS
Sbjct: 61  KVSPNSLQYPAGYLGAVPERTNEAENGSIAEAMEYLTNILSTKVYDIAIESPLQLAKKLS 120

Query: 106 TQLGINLWLKRDDSQYVFSFKIRGAYNMMANLPKEALESGVICASAGNHAQGVALAAGRL 165
            +LG+ ++LKR+D Q VFSFK+RGAYNMM  LP + L  GVIC+SAGNHAQGVAL+A +L
Sbjct: 121 KRLGVRMYLKREDLQPVFSFKLRGAYNMMVKLPADQLAKGVICSSAGNHAQGVALSASKL 180

Query: 166 RTEAVIVMPRSTPPIKIDAVRSLGGNVVLHGDTFDDAQEYAQQLRKVRNLTIIPPFDNEN 225
              AVIVMP +TP IK  AV +LG  VVL GD++D AQ +A+   +   LT IPPFD+ +
Sbjct: 181 GCTAVIVMPVTTPEIKWQAVENLGATVVLFGDSYDQAQAHAKIRAEEEGLTFIPPFDHPD 240

Query: 226 VIIGQGTVGMEIGRQMRGPLHAIFVPVGGGGLLAGVASF 262
           VI GQGTVGMEI RQ +GPLHAIFVPVGGGGL+AG+A++
Sbjct: 241 VIAGQGTVGMEITRQAKGPLHAIFVPVGGGGLIAGIAAY 279

[Close]

BLAST of MELO3C024497.jh1 vs. TAIR 10
Match: AT4G11640.1 (serine racemase )

HSP 1 Score: 106.7 bits (265), Expect = 2.9e-23
Identity = 66/194 (34.02%), Postives = 106/194 (54.64%), Query Frame = 0


Query: 71  ERRQMKYLKNILSSKVYDVAIE-----SPLELTRKLSTQLGINLWLKRDDSQYVFSFKIR 130
           E  + KY  +ILS K     I+     +P+  +  L++  G +L+ K +  Q   +FK R
Sbjct: 2   EANREKYAADILSIKEAHDRIKPYIHRTPVLTSESLNSISGRSLFFKCECLQKGGAFKFR 61

Query: 131 GAYNMMANLPKEALESGVICASAGNHAQGVALAAGRLRTEAVIVMPRSTPPIKIDAVRSL 190
           GA N + +L  E    GV+  S+GNHA  ++LAA      A IV+P+  P  K+D V   
Sbjct: 62  GACNAVLSLDAEQAAKGVVTHSSGNHAAALSLAAKIQGIPAYIVVPKGAPKCKVDNVIRY 121

Query: 191 GGNVVLHGDTFDDAQEYAQQLRKVRNLTIIPPFDNENVIIGQGTVGMEIGRQMRGPLHAI 250
           GG V+    T    +E A ++ +     +I P+++  +I GQGT+ +E+  Q++  + AI
Sbjct: 122 GGKVIWSEATMSSREEIASKVLQETGSVLIHPYNDGRIISGQGTIALELLEQIQ-EIDAI 181

Query: 251 FVPVGGGGLLAGVA 260
            VP+ GGGL++GVA
Sbjct: 182 VVPISGGGLISGVA 194

The following BLAST results are available for this feature:

BLAST of MELO3C024497.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143369.1	1.09e-150	93.31	threonine dehydratase biosynthetic, chloroplastic [Cucumis sativus] >KGN48214.1 ...	[more]
KAA0025315.1	9.33e-148	100.00	threonine dehydratase biosynthetic [Cucumis melo var. makuwa]	[more]
TYK07356.1	1.15e-120	99.45	threonine dehydratase biosynthetic [Cucumis melo var. makuwa]	[more]
XP_008465584.1	2.90e-108	73.52	PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Cucumis melo]	[more]
KAA0025314.1	3.54e-107	73.06	threonine dehydratase biosynthetic [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C024497.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZSS6	3.1e-70	61.19	Threonine dehydratase biosynthetic, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]
Q9AXU4	1.0e-65	51.30	Threonine dehydratase OS=Nicotiana attenuata OX=49451 GN=TD PE=1 SV=1	[more]
A0FKE6	2.3e-65	66.13	Threonine dehydratase 1 biosynthetic, chloroplastic OS=Solanum lycopersicum OX=4...	[more]
P25306	1.9e-64	55.65	Threonine dehydratase 2 biosynthetic, chloroplastic OS=Solanum lycopersicum OX=4...	[more]
Q39469	1.1e-54	52.00	Threonine dehydratase biosynthetic, chloroplastic OS=Cicer arietinum OX=3827 PE=...	[more]

BLAST of MELO3C024497.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHC3	5.27e-151	93.31	Threonine dehydratase OS=Cucumis sativus OX=3659 GN=Csa_6G448720 PE=3 SV=1	[more]
A0A5A7SLH6	4.52e-148	100.00	Threonine dehydratase biosynthetic OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A5D3CAJ2	5.59e-121	99.45	Threonine dehydratase biosynthetic OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3CP75	1.40e-108	73.52	Threonine dehydratase OS=Cucumis melo OX=3656 GN=LOC103503221 PE=3 SV=1	[more]
A0A5A7SI54	1.71e-107	73.06	Threonine dehydratase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold54...	[more]

BLAST of MELO3C024497.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10050.1	2.2e-71	61.19	L-O-methylthreonine resistant 1	[more]
AT4G11640.1	2.9e-23	34.02	serine racemase	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001926	Pyridoxal-phosphate dependent enzyme	PFAM	PF00291	PALP	coord: 11..131 e-value: 8.2E-36 score: 123.9
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	GENE3D	3.40.50.1100		coord: 3..88 e-value: 1.0E-48 score: 168.0
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	GENE3D	3.40.50.1100		coord: 89..130 e-value: 1.0E-48 score: 168.0
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	SUPERFAMILY	53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes	coord: 4..131
None	No IPR available	PANTHER	PTHR48078	THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED	coord: 1..131
None	No IPR available	PANTHER	PTHR48078:SF11	THREONINE DEHYDRATASE, MITOCHONDRIAL	coord: 1..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C024497.jh1.t2	MELO3C024497.jh1.t2	mRNA
MELO3C024497.jh1.t1	MELO3C024497.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006520	cellular amino acid metabolic process
molecular_function	GO:0030170	pyridoxal phosphate binding