MELO3C024405 (gene) Melon (DHL92) v4

Overview
NameMELO3C024405
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr01: 35454673 .. 35456390 (+)
RNA-Seq ExpressionMELO3C024405
SyntenyMELO3C024405
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTTACAACAATTGATGATTTTTTACTTGAGTACACGAGTTCGAGCATCATACATTCATTTATTTATTTATTTTTGTAAAGATGATTATTGGAATTATCTGGTGTTTGAAAAAAGAATAGAAAAGAATAACTTAATCTAAAACTCATTATAATTTGAGAAAGTAAGCTATGGTTTTTTAAACCTTAAGAGCCAGCTAATTCTATGACTAACAACTGCCTTCCCTTCTATTCCCTTGAAAACGGATGTTTTGCATTGGCCCCAGAGGTACACCAATAGCTCTGTAATAAACAACGACTTCGCTTATTTAAATCTGCACATCTAATCTCAAACCTTGATTACTTTAAATTAATCACCTTTCCTATAGAAATGGTCAAAGTTGAATTCCAAGCTTCCAAGTTCACCTGGTTGCAGCTAGAAAGATAAGGCAACAATCATTTTGGTAAAGATAAGAGTAAACTTCTCACATCATTTCGCCAGACAATGGTGAAACTGAGATGAGATCATTAGAACAAACCAATGAGCTTAGCAAACCCAAGGCTTCTTTACAAAAAAACAGTATATTTTGAATGTTCAAAGTCAAAGGAAGAGCTTATACAACACGTATTTGTGCAACATCTGTTACTTGTCCTAGTTGCCATCTCTGCCATATAAATATGACCCAATACCGGACTGTTTCTCTCCGGTTGTGCCAAATCCTTGCCTGCTAGACGAGCAGCCAAGAAAAAGAAAAGATAATGTCTGTGAAGAAGTCTCTCTCTCTAACAAAGGCCGAGGAGGCCAAGCGCCTCACAAGGCACGAAGCTGCCAGAAAGCGCAGGAGATCTTTTGATTTCTGTTTTTCATACCCAGAGCTACCAATGGAACGCGGAAAGTCTTTGAAAGAGATGAATTCAGAGAAGTTGAAGACTGGAATCAAGAAATGGGCTAAAGCTGTGGTGGCTTATGCTCGCACAGTAAGCGATCGCTTTGGAAGCCGGCGTCGCTAATTGAACCAGATGAAATTTCCATGGAACTTGATGAATTTGACTGAATTAGAATGACTCAATTTCTCTCTTCAACATGAGGTTTGTTTTTGTGTAAGGAAGACCTTTGAAAGCAAAGTAGTCTCAATGATGATGGGCGCACGTCTTTTGAGTCATTGGTTGGGGGCTTATGGCTTGCATGAAGAAAAAGGATCAGAATGAAACTCATTTGTATTGTGTCATGAAAGCTGAAGATCAAAAACAATGTACATAGTCTACTTTCTTGTTCCTTCTTCGTCTGAAATAAAATGCACCTTCAACTTTTTCTTGAGGCGTCTGAAATAAAATGCACCTTCAGCTTTTTCTCGAGGAATAAAGTGAGATTCTCTTTGATAAATGAACGATCACGGAAGCAAAACAGTACTAAGATTCCCTGTGTGCAATGAATGATCTATCTCTCTATTCTTTTCCTCCCTTCATTCATTGAAAGAGGAATGGTCAAATGGGTTTAGAAAATCAAACCCACAAAAACTATCCACCAGTACGTGTGAATGAAGAAAAACACCAAAAAATAATGATAATAACAACAAAGAAAAAAAGAAAAACACAAGATGGTGGAGAAAATACATCTATAACACCCCCCCCCCCCCAAAAAAAAAAAAAAAAGAAAGAAAACACCTCGTGTAAATTCAGACTTCTATGATATTCATCTATAATTCTATATGCTCTATACCAAAGAACGGAAGTGGGAAAGA

mRNA sequence

AGTTACAACAATTGATGATTTTTTACTTGAGTACACGAGTTCGAGCATCATACATTCATTTATTTATTTATTTTTGTAAAGATGATTATTGGAATTATCTGGTGTTTGAAAAAAGAATAGAAAAGAATAACTTAATCTAAAACTCATTATAATTTGAGAAAGTAAGCTATGGTTTTTTAAACCTTAAGAGCCAGCTAATTCTATGACTAACAACTGCCTTCCCTTCTATTCCCTTGAAAACGGATGTTTTGCATTGGCCCCAGAGGTACACCAATAGCTCTGTAATAAACAACGACTTCGCTTATTTAAATCTGCACATCTAATCTCAAACCTTGATTACTTTAAATTAATCACCTTTCCTATAGAAATGGTCAAAGTTGAATTCCAAGCTTCCAAGTTCACCTGGTTGCAGCTAGAAAGATAAGGCAACAATCATTTTGGTAAAGATAAGAGTAAACTTCTCACATCATTTCGCCAGACAATGGTGAAACTGAGATGAGATCATTAGAACAAACCAATGAGCTTAGCAAACCCAAGGCTTCTTTACAAAAAAACAGTATATTTTGAATGTTCAAAGTCAAAGGAAGAGCTTATACAACACGTATTTGTGCAACATCTGTTACTTGTCCTAGTTGCCATCTCTGCCATATAAATATGACCCAATACCGGACTGTTTCTCTCCGGTTGTGCCAAATCCTTGCCTGCTAGACGAGCAGCCAAGAAAAAGAAAAGATAATGTCTGTGAAGAAGTCTCTCTCTCTAACAAAGGCCGAGGAGGCCAAGCGCCTCACAAGGCACGAAGCTGCCAGAAAGCGCAGGAGATCTTTTGATTTCTGTTTTTCATACCCAGAGCTACCAATGGAACGCGGAAAGTCTTTGAAAGAGATGAATTCAGAGAAGTTGAAGACTGGAATCAAGAAATGGGCTAAAGCTGTGGTGGCTTATGCTCGCACAGTAAGCGATCGCTTTGGAAGCCGGCGTCGCTAATTGAACCAGATGAAATTTCCATGGAACTTGATGAATTTGACTGAATTAGAATGACTCAATTTCTCTCTTCAACATGAGGTTTGTTTTTGTGTAAGGAAGACCTTTGAAAGCAAAGTAGTCTCAATGATGATGGGCGCACGTCTTTTGAGTCATTGGTTGGGGGCTTATGGCTTGCATGAAGAAAAAGGATCAGAATGAAACTCATTTGTATTGTGTCATGAAAGCTGAAGATCAAAAACAATGTACATAGTCTACTTTCTTGTTCCTTCTTCGTCTGAAATAAAATGCACCTTCAACTTTTTCTTGAGGCGTCTGAAATAAAATGCACCTTCAGCTTTTTCTCGAGGAATAAAGTGAGATTCTCTTTGATAAATGAACGATCACGGAAGCAAAACAGTACTAAGATTCCCTGTGTGCAATGAATGATCTATCTCTCTATTCTTTTCCTCCCTTCATTCATTGAAAGAGGAATGGTCAAATGGGTTTAGAAAATCAAACCCACAAAAACTATCCACCAGTACGTGTGAATGAAGAAAAACACCAAAAAATAATGATAATAACAACAAAGAAAAAAAGAAAAACACAAGATGGTGGAGAAAATACATCTATAACACCCCCCCCCCCCCAAAAAAAAAAAAAAAAGAAAGAAAACACCTCGTGTAAATTCAGACTTCTATGATATTCATCTATAATTCTATATGCTCTATACCAAAGAACGGAAGTGGGAAAGA

Coding sequence (CDS)

ATGTCTGTGAAGAAGTCTCTCTCTCTAACAAAGGCCGAGGAGGCCAAGCGCCTCACAAGGCACGAAGCTGCCAGAAAGCGCAGGAGATCTTTTGATTTCTGTTTTTCATACCCAGAGCTACCAATGGAACGCGGAAAGTCTTTGAAAGAGATGAATTCAGAGAAGTTGAAGACTGGAATCAAGAAATGGGCTAAAGCTGTGGTGGCTTATGCTCGCACAGTAAGCGATCGCTTTGGAAGCCGGCGTCGCTAA

Protein sequence

MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDFCFSYPELPMERGKSLKEMNSEKLKTGIKKWAKAVVAYARTVSDRFGSRRR
Homology
BLAST of MELO3C024405 vs. NCBI nr
Match: KAA0059447.1 (hypothetical protein E6C27_scaffold242G001750 [Cucumis melo var. makuwa] >TYK03877.1 hypothetical protein E5676_scaffold347G00720 [Cucumis melo var. makuwa])

HSP 1 Score: 157.9 bits (398), Expect = 3.7e-35
Identity = 82/83 (98.80%), Postives = 82/83 (98.80%), Query Frame = 0

Query: 1  MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDFCFSYPELPMERGKSLKEMNSEKLKTGI 60
          MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFD CFSYPELPMERGKSLKEMNSEKLKTGI
Sbjct: 1  MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPELPMERGKSLKEMNSEKLKTGI 60

Query: 61 KKWAKAVVAYARTVSDRFGSRRR 84
          KKWAKAVVAYARTVSDRFGSRRR
Sbjct: 61 KKWAKAVVAYARTVSDRFGSRRR 83

BLAST of MELO3C024405 vs. NCBI nr
Match: KGN45542.1 (hypothetical protein Csa_016865 [Cucumis sativus])

HSP 1 Score: 157.1 bits (396), Expect = 6.4e-35
Identity = 81/83 (97.59%), Postives = 82/83 (98.80%), Query Frame = 0

Query: 1  MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDFCFSYPELPMERGKSLKEMNSEKLKTGI 60
          MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFD CFSYPE+PMERGKSLKEMNSEKLKTGI
Sbjct: 1  MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGI 60

Query: 61 KKWAKAVVAYARTVSDRFGSRRR 84
          KKWAKAVVAYARTVSDRFGSRRR
Sbjct: 61 KKWAKAVVAYARTVSDRFGSRRR 83

BLAST of MELO3C024405 vs. NCBI nr
Match: KAG6593505.1 (hypothetical protein SDJN03_12981, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 133.3 bits (334), Expect = 9.9e-28
Identity = 70/83 (84.34%), Postives = 76/83 (91.57%), Query Frame = 0

Query: 1  MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDFCFSYPELPMERGKSLKEMNSEKLKTGI 60
          MSVKKSLSLTKAEEAKR  RH+AARKRRRSFD CFS P+L MERGKSLKEM+SEKLK+GI
Sbjct: 1  MSVKKSLSLTKAEEAKRSARHDAARKRRRSFDLCFSSPKLQMERGKSLKEMDSEKLKSGI 60

Query: 61 KKWAKAVVAYARTVSDRFGSRRR 84
          +KWAK+VVAYAR VSDRFGS RR
Sbjct: 61 RKWAKSVVAYARQVSDRFGSWRR 83

BLAST of MELO3C024405 vs. NCBI nr
Match: KAG6575488.1 (hypothetical protein SDJN03_26127, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 132.1 bits (331), Expect = 2.2e-27
Identity = 70/82 (85.37%), Postives = 74/82 (90.24%), Query Frame = 0

Query: 1  MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDFCFSYPELPMERGKSLKEMNSEKLKTGI 60
          MSVKKS SLTKAEEAKR  RH+AARKRRRSFD CFS PELPME GKSLKEM+SEKLK  I
Sbjct: 1  MSVKKSFSLTKAEEAKRPGRHDAARKRRRSFDLCFSSPELPMEYGKSLKEMDSEKLKDAI 60

Query: 61 KKWAKAVVAYARTVSDRFGSRR 83
          +KWAKAVVAYARTVS+RFGSRR
Sbjct: 61 RKWAKAVVAYARTVSNRFGSRR 82

BLAST of MELO3C024405 vs. NCBI nr
Match: PON96105.1 (hypothetical protein TorRG33x02_080350 [Trema orientale])

HSP 1 Score: 86.7 bits (213), Expect = 1.1e-13
Identity = 51/82 (62.20%), Postives = 60/82 (73.17%), Query Frame = 0

Query: 1  MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDFCFSYPELPMERGKSLKEMNSEKLKTGI 60
          MSVKK+LSL + E AK    H+ +  RR  +  CFS+ ELPMERGK+LKEM+S KLK  I
Sbjct: 1  MSVKKTLSLNRGEAAK---GHQIS-VRRGKYGRCFSFVELPMERGKTLKEMDSNKLKFEI 60

Query: 61 KKWAKAVVAYARTVSDRFGSRR 83
          K+WAKAVVAYAR VS RFG  R
Sbjct: 61 KRWAKAVVAYARQVSGRFGGTR 78

BLAST of MELO3C024405 vs. ExPASy TrEMBL
Match: A0A5A7UXU0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00720 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.8e-35
Identity = 82/83 (98.80%), Postives = 82/83 (98.80%), Query Frame = 0

Query: 1  MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDFCFSYPELPMERGKSLKEMNSEKLKTGI 60
          MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFD CFSYPELPMERGKSLKEMNSEKLKTGI
Sbjct: 1  MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPELPMERGKSLKEMNSEKLKTGI 60

Query: 61 KKWAKAVVAYARTVSDRFGSRRR 84
          KKWAKAVVAYARTVSDRFGSRRR
Sbjct: 61 KKWAKAVVAYARTVSDRFGSRRR 83

BLAST of MELO3C024405 vs. ExPASy TrEMBL
Match: A0A0A0KB03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G451980 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.1e-35
Identity = 81/83 (97.59%), Postives = 82/83 (98.80%), Query Frame = 0

Query: 1  MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDFCFSYPELPMERGKSLKEMNSEKLKTGI 60
          MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFD CFSYPE+PMERGKSLKEMNSEKLKTGI
Sbjct: 1  MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGI 60

Query: 61 KKWAKAVVAYARTVSDRFGSRRR 84
          KKWAKAVVAYARTVSDRFGSRRR
Sbjct: 61 KKWAKAVVAYARTVSDRFGSRRR 83

BLAST of MELO3C024405 vs. ExPASy TrEMBL
Match: A0A2P5FE88 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_080350 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.1e-14
Identity = 51/82 (62.20%), Postives = 60/82 (73.17%), Query Frame = 0

Query: 1  MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDFCFSYPELPMERGKSLKEMNSEKLKTGI 60
          MSVKK+LSL + E AK    H+ +  RR  +  CFS+ ELPMERGK+LKEM+S KLK  I
Sbjct: 1  MSVKKTLSLNRGEAAK---GHQIS-VRRGKYGRCFSFVELPMERGKTLKEMDSNKLKFEI 60

Query: 61 KKWAKAVVAYARTVSDRFGSRR 83
          K+WAKAVVAYAR VS RFG  R
Sbjct: 61 KRWAKAVVAYARQVSGRFGGTR 78

BLAST of MELO3C024405 vs. ExPASy TrEMBL
Match: A0A498IZM5 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_000327 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.5e-13
Identity = 49/79 (62.03%), Postives = 58/79 (73.42%), Query Frame = 0

Query: 4   KKSLSLTKAEEAKRLTRHEAARKRRRSFDFCFSYPELPMERGKSLKEMNSEKLKTGIKKW 63
           +K+LSL   E  K      AA++ R  FD CFS+ E+  E GKSLKEM+SEKLK+GIK+W
Sbjct: 25  RKTLSLNNGEAGKSSGDVVAAKRTR--FDRCFSFMEVSTEPGKSLKEMDSEKLKSGIKRW 84

Query: 64  AKAVVAYARTVSDRFGSRR 83
           AKAVVAYAR VSDRFGS R
Sbjct: 85  AKAVVAYARQVSDRFGSSR 101

BLAST of MELO3C024405 vs. ExPASy TrEMBL
Match: A0A540KWP0 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_036021 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.5e-13
Identity = 49/79 (62.03%), Postives = 58/79 (73.42%), Query Frame = 0

Query: 4   KKSLSLTKAEEAKRLTRHEAARKRRRSFDFCFSYPELPMERGKSLKEMNSEKLKTGIKKW 63
           +K+LSL   E  K      AA++ R  FD CFS+ E+  E GKSLKEM+SEKLK+GIK+W
Sbjct: 25  RKTLSLNNGEAGKSSGDVVAAKRTR--FDRCFSFMEVSTEPGKSLKEMDSEKLKSGIKRW 84

Query: 64  AKAVVAYARTVSDRFGSRR 83
           AKAVVAYAR VSDRFGS R
Sbjct: 85  AKAVVAYARQVSDRFGSSR 101

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0059447.13.7e-3598.80hypothetical protein E6C27_scaffold242G001750 [Cucumis melo var. makuwa] >TYK038... [more]
KGN45542.16.4e-3597.59hypothetical protein Csa_016865 [Cucumis sativus][more]
KAG6593505.19.9e-2884.34hypothetical protein SDJN03_12981, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6575488.12.2e-2785.37hypothetical protein SDJN03_26127, partial [Cucurbita argyrosperma subsp. sorori... [more]
PON96105.11.1e-1362.20hypothetical protein TorRG33x02_080350 [Trema orientale][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UXU01.8e-3598.80Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KB033.1e-3597.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G451980 PE=4 SV=1[more]
A0A2P5FE885.1e-1462.20Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_080350 PE=4 SV... [more]
A0A498IZM51.5e-1362.03Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_000327 PE=4 SV=1[more]
A0A540KWP01.5e-1362.03Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_036021 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availablePANTHERPTHR36484:SF2OS01G0558700 PROTEINcoord: 1..83
NoneNo IPR availablePANTHERPTHR36484OS01G0558700 PROTEINcoord: 1..83

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C024405.1MELO3C024405.1mRNA