MELO3C024347 (gene) Melon (DHL92) v4

Overview
NameMELO3C024347
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr01: 35049669 .. 35050176 (+)
RNA-Seq ExpressionMELO3C024347
SyntenyMELO3C024347
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAGACACACACACTTTCCAAATGCGTGAGTCTTACAAATTAGAGGCGCAAGATGAGGCCAAATCCCTCCTCCGCTCCGGCTACCGTCGTCCCTCACGGCGGTGGATCCTTCTACGGCGGAAGAAGCTTCCTACGGCCCGTCTCGGCGGAAGAAGGCCACCAAGAACGGTGGCGATATGGAGGTCAATTAAAGAAATTAAAATGAGAAAGTGGGCGGCGATGATGACGATGAAGGTACGATGCAAAGACATTGCCGGCTTCAATGCTTTTCTAAAAAAGATTCTATTGGAGATTTCTTTAGCTATTCCACTTCTTGGCGTTTCCCTCTCTATTTAACTATATACTCTTATTATGTACAGTACTCTCCATCCATCCATCCAAAACTTGGAAGTGTTTGAATCTTTCTTATTATAGCTTTTAAGTACAAAGAAATTCTGAGTTTAAATTTGCTTATAGACTTTCTTCAAAGTTACTTCAACACTGTTACCCATTTGCTATCACTATATCT

mRNA sequence

ACAGACACACACACTTTCCAAATGCGTGAGTCTTACAAATTAGAGGCGCAAGATGAGGCCAAATCCCTCCTCCGCTCCGGCTACCGTCGTCCCTCACGGCGGTGGATCCTTCTACGGCGGAAGAAGCTTCCTACGGCCCGTCTCGGCGGAAGAAGGCCACCAAGAACGGTGGCGATATGGAGGTCAATTAAAGAAATTAAAATGAGAAAGTGGGCGGCGATGATGACGATGAAGGTACGATGCAAAGACATTGCCGGCTTCAATGCTTTTCTAAAAAAGATTCTATTGGAGATTTCTTTAGCTATTCCACTTCTTGGCGTTTCCCTCTCTATTTAACTATATACTCTTATTATGTACAGTACTCTCCATCCATCCATCCAAAACTTGGAAGTGTTTGAATCTTTCTTATTATAGCTTTTAAGTACAAAGAAATTCTGAGTTTAAATTTGCTTATAGACTTTCTTCAAAGTTACTTCAACACTGTTACCCATTTGCTATCACTATATCT

Coding sequence (CDS)

ATGCGTGAGTCTTACAAATTAGAGGCGCAAGATGAGGCCAAATCCCTCCTCCGCTCCGGCTACCGTCGTCCCTCACGGCGGTGGATCCTTCTACGGCGGAAGAAGCTTCCTACGGCCCGTCTCGGCGGAAGAAGGCCACCAAGAACGGTGGCGATATGGAGGTCAATTAAAGAAATTAAAATGAGAAAGTGGGCGGCGATGATGACGATGAAGGTACGATGCAAAGACATTGCCGGCTTCAATGCTTTTCTAAAAAAGATTCTATTGGAGATTTCTTTAGCTATTCCACTTCTTGGCGTTTCCCTCTCTATTTAA

Protein sequence

MRESYKLEAQDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTVAIWRSIKEIKMRKWAAMMTMKVRCKDIAGFNAFLKKILLEISLAIPLLGVSLSI
Homology
BLAST of MELO3C024347 vs. NCBI nr
Match: KAA0059393.1 (hypothetical protein E6C27_scaffold242G001190 [Cucumis melo var. makuwa] >TYK03934.1 hypothetical protein E5676_scaffold347G001310 [Cucumis melo var. makuwa])

HSP 1 Score: 198.7 bits (504), Expect = 2.4e-47
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0

Query: 1   MRESYKLEAQDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTVAIWRSIKEIK 60
           MRESYKLEAQDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTVAIWRSIKEIK
Sbjct: 1   MRESYKLEAQDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTVAIWRSIKEIK 60

Query: 61  MRKWAAMMTMKVRCKDIAGFNAFLKKILLEISLAIPLLGVSLSI 105
           MRKWAAMMTMKVRCKDIAGFNAFLKKILLEISLAIPLLGVSLSI
Sbjct: 61  MRKWAAMMTMKVRCKDIAGFNAFLKKILLEISLAIPLLGVSLSI 104

BLAST of MELO3C024347 vs. NCBI nr
Match: KAE8646502.1 (hypothetical protein Csa_015773 [Cucumis sativus])

HSP 1 Score: 172.6 bits (436), Expect = 1.8e-39
Identity = 89/101 (88.12%), Postives = 93/101 (92.08%), Query Frame = 0

Query: 4   SYKLEAQDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTVAIWRSIKEIKMRK 63
           SY+LEA+DEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRT AIWRSIKEIKMRK
Sbjct: 5   SYELEAEDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEIKMRK 64

Query: 64  WAAMMTMKVRCKDIAGFNAFLKKILLEISLAIPLLGVSLSI 105
           WA  MT KVRCKDIA FNAFL+KILLEISLAIPLLG  L +
Sbjct: 65  WAMTMTNKVRCKDIASFNAFLRKILLEISLAIPLLGDGLEV 105

BLAST of MELO3C024347 vs. NCBI nr
Match: KAG7013982.1 (hypothetical protein SDJN02_24152, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 122.5 bits (306), Expect = 2.2e-24
Identity = 67/113 (59.29%), Postives = 80/113 (70.80%), Query Frame = 0

Query: 1   MRESYKLEAQDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTVAIWRSIKEIK 60
           M +SY+ + QDEA+ LL SG+RRP RRWI LRRKKL TARLGGRRPPR   IWRSI++++
Sbjct: 1   MAQSYESQLQDEAQPLLLSGHRRPLRRWIHLRRKKLSTARLGGRRPPRAAVIWRSIRKVR 60

Query: 61  MRKWAAMMTMKVRC------------KDIAGFNAFLKKILLEISLAIPLLGVS 102
           MRKW     MKVRC            KD  GFN FLK+IL+EIS A+P+LG S
Sbjct: 61  MRKW----LMKVRCDCKVKKINELFDKDNGGFNGFLKRILMEISSAVPVLGAS 109

BLAST of MELO3C024347 vs. NCBI nr
Match: KAG6575440.1 (hypothetical protein SDJN03_26079, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 122.5 bits (306), Expect = 2.2e-24
Identity = 67/113 (59.29%), Postives = 80/113 (70.80%), Query Frame = 0

Query: 1   MRESYKLEAQDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTVAIWRSIKEIK 60
           M +SY+ + QDEA+ LL SG+RRP RRWI LRRKKL TARLGGRRPPR   IWRSI++++
Sbjct: 1   MAQSYESQLQDEAQPLLLSGHRRPLRRWIHLRRKKLSTARLGGRRPPRAAVIWRSIRKVR 60

Query: 61  MRKWAAMMTMKVRC------------KDIAGFNAFLKKILLEISLAIPLLGVS 102
           MRKW     MKVRC            KD  GFN FLK+IL+EIS A+P+LG S
Sbjct: 61  MRKW----LMKVRCDCKVKKMNELFDKDNGGFNGFLKRILMEISSAVPVLGAS 109

BLAST of MELO3C024347 vs. NCBI nr
Match: KAG6593556.1 (hypothetical protein SDJN03_13032, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 101.7 bits (252), Expect = 4.0e-18
Identity = 60/122 (49.18%), Postives = 77/122 (63.11%), Query Frame = 0

Query: 1   MRESYKLEAQDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTVAIWRSIKEIK 60
           M +S++ + +DEA+SLL S +RRP RRWI LRRK+LP  RLGG RPPR  A WRS   I+
Sbjct: 1   MAQSHESQPKDEAQSLLHSSHRRPHRRWIHLRRKRLPIVRLGGERPPRAAAHWRS---IR 60

Query: 61  MRKWAAMMTMKVRCKDI-------------------AGFNAFLKKILLEISLAIPLLGVS 104
            RKW     MK+RC  +                    GF+AFLK+IL+EISLA+P+LG S
Sbjct: 61  FRKW----LMKIRCDCLVKKLKQLFGKGTGSGGDGGGGFDAFLKRILMEISLAVPVLGAS 115

BLAST of MELO3C024347 vs. ExPASy TrEMBL
Match: A0A5A7UTZ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001310 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.2e-47
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0

Query: 1   MRESYKLEAQDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTVAIWRSIKEIK 60
           MRESYKLEAQDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTVAIWRSIKEIK
Sbjct: 1   MRESYKLEAQDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTVAIWRSIKEIK 60

Query: 61  MRKWAAMMTMKVRCKDIAGFNAFLKKILLEISLAIPLLGVSLSI 105
           MRKWAAMMTMKVRCKDIAGFNAFLKKILLEISLAIPLLGVSLSI
Sbjct: 61  MRKWAAMMTMKVRCKDIAGFNAFLKKILLEISLAIPLLGVSLSI 104

BLAST of MELO3C024347 vs. ExPASy TrEMBL
Match: A0A0A0KCH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448920 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.2e-41
Identity = 93/101 (92.08%), Postives = 96/101 (95.05%), Query Frame = 0

Query: 4   SYKLEAQDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTVAIWRSIKEIKMRK 63
           SY+LEA+DEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRT AIWRSIKEIKMRK
Sbjct: 5   SYELEAEDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEIKMRK 64

Query: 64  WAAMMTMKVRCKDIAGFNAFLKKILLEISLAIPLLGVSLSI 105
           WA  MT KVRCKDIA FNAFL+KILLEISLAIPLLGVSLSI
Sbjct: 65  WAMTMTNKVRCKDIASFNAFLRKILLEISLAIPLLGVSLSI 105

BLAST of MELO3C024347 vs. ExPASy TrEMBL
Match: A0A6J1GVZ8 (uncharacterized protein LOC111458050 OS=Cucurbita moschata OX=3662 GN=LOC111458050 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.2e-05
Identity = 42/101 (41.58%), Postives = 61/101 (60.40%), Query Frame = 0

Query: 17  LRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTVAIWRSIKEIKMRKWAAM----MTMKV 76
           LR G RR +RR +  RR+++P ARLGG+R  R VA  R +++I++R W  +    M  K+
Sbjct: 16  LRRGTRRGTRRGMRFRRRRMPVARLGGKRSGRLVAWGRMLRKIRLR-WVKLKCIAMVKKM 75

Query: 77  R------CKDIAGFNAFLK----KILLEISLAIPLLGVSLS 104
           +       KDI    A+ +    ++LLE S AIP+LGVSLS
Sbjct: 76  KEYYTRLMKDIIEAGAYARSYQHRLLLETSFAIPILGVSLS 115

BLAST of MELO3C024347 vs. ExPASy TrEMBL
Match: A0A2P5EDF5 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_206290 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.2e-04
Identity = 37/96 (38.54%), Postives = 58/96 (60.42%), Query Frame = 0

Query: 22  RRPSRRWILLRRKKLPTARLGGRRPPRTVAIWRSIKEIKMRKWAAM----MTMKVR---- 81
           RR +R+ I LRR+KLP  RLGG+RP R V + R ++ I++R+W  +    M  K++    
Sbjct: 19  RRVARQGIPLRRRKLPMVRLGGKRPRRAVVLIRWLRRIRLRRWLKLHYLRMLKKLKETYR 78

Query: 82  --CKDIAGFNAFLK----KILLEISLAIPLLGVSLS 104
              KD+A   A L+    ++ LE S A+P++GVS +
Sbjct: 79  NLVKDMAAAGASLETFHHRVFLESSFALPVMGVSFT 114

BLAST of MELO3C024347 vs. ExPASy TrEMBL
Match: A0A2P6RYU2 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0146001 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.6e-04
Identity = 41/94 (43.62%), Postives = 57/94 (60.64%), Query Frame = 0

Query: 23  RPSRRWILLRRKKLPTARLGGRRPPRTVAIWRSIKEIKMR----KWAAMM-----TMKVR 82
           R SR  I LRR+KLP ARLGG++PPR V + R  ++I++R    K+  M+     + K  
Sbjct: 52  RMSRYRISLRRRKLPMARLGGKKPPRGVMLVRMFRKIRLRWLKLKYFCMLKKLKESYKNM 111

Query: 83  CKDI----AGFNAFLKKILLEISLAIPLLGVSLS 104
            KD+    A F  F +KI +E + AIP +GVSLS
Sbjct: 112 VKDLMEAGASFETFQQKIFMEATFAIP-MGVSLS 144

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0059393.12.4e-47100.00hypothetical protein E6C27_scaffold242G001190 [Cucumis melo var. makuwa] >TYK039... [more]
KAE8646502.11.8e-3988.12hypothetical protein Csa_015773 [Cucumis sativus][more]
KAG7013982.12.2e-2459.29hypothetical protein SDJN02_24152, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6575440.12.2e-2459.29hypothetical protein SDJN03_26079, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6593556.14.0e-1849.18hypothetical protein SDJN03_13032, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UTZ41.2e-47100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KCH41.2e-4192.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448920 PE=4 SV=1[more]
A0A6J1GVZ83.2e-0541.58uncharacterized protein LOC111458050 OS=Cucurbita moschata OX=3662 GN=LOC1114580... [more]
A0A2P5EDF51.2e-0438.54Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_206290 PE=4 SV... [more]
A0A2P6RYU21.6e-0443.62Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0146001 PE=4... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C024347.1MELO3C024347.1mRNA