MELO3C024227 (gene) Melon (DHL92) v4

Overview


Name	MELO3C024227
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Protein SYS1 homolog
Location	chr01: 34206328 .. 34209258 (-)
RNA-Seq Expression	MELO3C024227
Synteny	MELO3C024227

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAAGCTTCGATTTTACATTACAACTGTAGCGCATCTCTACCAAAGAAAATTTCCTCACGGGAGGCACCGGCCCGGACACGACCTACAAAATCTGAAGAAAAAGGGGAAGGAATTCTTCCCGGAAACCTGAATTTTGCCGCCGGCTGCTTCTATTTCTCTCTTCTCGATCTCAAGATTCACGCTTTTATATGTTCCAGTCTTGATCTAATTCTTATTTTCTGGTTAGACGCCATTGCGATACGTTCGTTGTATTAGCGAATTGGGATTTAATCGATTTCTAGGGTTGGATTCTTCAATTGGGATTTTTTTTTTCTTCTCTTTGATTTGAATGTTTCTTTAGTTAGTTATATATTGTTCTGATTTTAGTATGGGTGGATATGGATTTGCTTGATTCAGATCCAATGAAACAAGATTGGTAAATTCTTGTGCCAGAGCCAGCGAGAGGATTTTTCAAGAGAAATGAGCATCTCTTGAATTTCATTGTCAATTTGAGGGGTTGTAATTCGTATTTCAATTATTCTGGAAGAAGTTGGGTTCTGTTGAGTTTAGGTTTGAGTATCGTAATTGAGAAGCTAGAACCGACTGACTACTGGAGTCATGTTCTATGGTGCAGGGGTATGGGACCCTTGGCTCATTGTTGCCCAAATTGTTTGCCTTCAATGTTTCTATTACCTCACTCTTGGTATATTCCTTGCAACTTTAGTCGGCACTCGCGTTTCTCGGATCAGCCTTGTTTACTTCTTTGATTATGCTACAATAACTGTTTCTACTGCCACTGGTTGGTGTGTGATTGCTTCGTTCCTGTTAAGTGCAATTGCTGGGTAAGAATTTTGTTTTAGGTTCCCCCCCCCCCCCCCCCCCCCCCTATTTGGGATAATATTTGCAATGCATGGTTAGGAATAATTGACAAATCTCAACCATGTTTGTCTGCCCTGTTTTTATATATTAAAAGTTAGAAAGTTAGAACTACTTTAGCCGCATGTTAATACACGATACTTGGTTTAGACAAGTTGTATTTGATGCAGCCTTTGTTACATTATTTGGAATGATTTAGATTAAACACCCTCGATAAAATTTTTTTGATTGTTAACCATGAAAATGGTTTGCTTTGAATGTCATATTAATGTTTGTGTTTTTATCTCTGTATTATGTAATGAGGCCATTTTTTTGTAAACTACAATTGCACCCATCTCTTTGGTGTTTGAAGCTTATTTCTTAATGGTTCATAGTATCCTGTATGTTGTTCCTTCAGGAAGTGATGTGAATTTCAATTAAGCTCCATGTTCATGTACTAGCTGGTTAGCTACTTTTGTTAGAACCTTTTTTTTTCCCTCGACTTCCTATCTTCTGAATCCCTTTTAGTCTGTTTTGACTTTGAAGAAATATATTGTTTTTGCCTTTTTAGATGTTGTCCATTACTATCACAGAAATTCACATGTTTAATAGTTTGATGTTTGGGTTTGTTAGCTCTACTTATCATAAAACTACATTCCAAATTGCCAATATAAACATAAATGTTGAAACTCTACGGAATGAGAAAGCAAGTCATTTAGAATATGCCGTTATTGGTTTGTTGTCGTGCTTTTTATTTCAATTTTTGGGCTGATACTGGCAGCTTTCCTCCCTTGAATATTTTGTTTGGAATATGTGGGCGATGGATTGGGGACTGGGGTGGTTGAAGGATGGCAACATAGTTTTGGAGTAATAGGGACAGTAGATATTGTTTCTGTTAAATGTTATCCTGAAAGTTACTTTCTAGCATTGTACCCTCTTTTCTTATGTTTAATACACTTGCTGGTAACTAGTTGCAAAGTAATCAATTCTGAATTAATTTTTTTTCTCATATTGTTTAATATGTTTTATATAAAACTAGTGTCAGCTTCTCTTACCATTACGTCTTTCTTGTCATACAGAGCAGGTTATCTGGTTTATTTGATTGAAAGAGCAAAGAAGTGCTTAGATTTTGCAGCCACACTCTATATATTCCACCTTTTCATTTGTATCGTTTATGGAGGGTGGCCTTCCTCAATGACGTGGTGGGTTGTGAACGGAACTGGGCTTGTAGTCATGTCTTTACTGGGTGAATACCTGTGCATCAAGCGGGAGCTTCGAGAAATTCCTATAACACGATTGCGTTCAAGTAAGGCTTCTTTCCTCAAGGAAATCAATAATTAACCTTCTTTGACATTCAAATTGTTTAAAATTCACTATTCACAATACTACTGCTAACTAACATGGTTGACTGGAAAACAAAACATGCTAGTACAAAAATTTTAATTCGTGTTAGCCTAATATTTTACTCCATTCCATGCTCGACTTTGCAGTTGAGTTGACATGTCCCAAGTTGTTTATTTTTGAGAAAAAACTTGTTCTCATGTTTAAGATCACTCAGAAGTAGTGTAGTTGAACCATAATGAAAACATATTTTGGTGCAGATGTCTGAGCTCAAAATTCAAATTGCAAGAACCACCTCTTCATGCATGATTTTTTGGTGGCCTATCTTATTAAATTTGTTTAGCTAGTGGATAAAGCTGATGAAAAGCCAGATCAAATGAGAATCAAGGAAGAGGAACTAGTTATGATGATTGACCGTAAATATCGAAAATAACCTAGATCAGTGCGCTGGACTATGATCTAGTGTTTCGAAGCTTTACACAAGTACAGGAAGTTTTTGTAACTTTTTGAGGAATGGGTCACTTCCAATGGTGAAAACAGGCGATGACTGATGGCTATAAAGCTTTGTTTGTTCCTTTTCTTGTTTTAATGGTTAAAGGATATATATTGTTAGTTGCTTTTATTCATTTAATTCCTTCATACAGATGAGTTTACAGCTTAGTTTGGAATGAGACTTCTTTTACTCCTCATTTTGCAATGCGAAGTTTCAATGATAGTGAATAGCCATGAATATAATGAAAATTTAGCATAACT

mRNA sequence

GAAAAAGCTTCGATTTTACATTACAACTGTAGCGCATCTCTACCAAAGAAAATTTCCTCACGGGAGGCACCGGCCCGGACACGACCTACAAAATCTGAAGAAAAAGGGGAAGGAATTCTTCCCGGAAACCTGAATTTTGCCGCCGGCTGCTTCTATTTCTCTCTTCTCGATCTCAAGATTCACGCTTTTATATGTTCCAGTCTTGATCTAATTCTTATTTTCTGGTTAGACGCCATTGCGATACGTTCGTTGTATTAGCGAATTGGGATTTAATCGATTTCTAGGGTTGGATTCTTCAATTGGGATTTTTTTTTTCTTCTCTTTGATTTGAATGTTTCTTTAGTTAGTTATATATTGTTCTGATTTTAGTATGGGTGGATATGGATTTGCTTGATTCAGATCCAATGAAACAAGATTGGTAAATTCTTGTGCCAGAGCCAGCGAGAGGATTTTTCAAGAGAAATGAGCATCTCTTGAATTTCATTGTCAATTTGAGGGGTTGTAATTCGTATTTCAATTATTCTGGAAGAAGTTGGGTTCTGTTGAGTTTAGGTTTGAGTATCGTAATTGAGAAGCTAGAACCGACTGACTACTGGAGTCATGTTCTATGGTGCAGGGGTATGGGACCCTTGGCTCATTGTTGCCCAAATTGTTTGCCTTCAATGTTTCTATTACCTCACTCTTGGTATATTCCTTGCAACTTTAGTCGGCACTCGCGTTTCTCGGATCAGCCTTGTTTACTTCTTTGATTATGCTACAATAACTGTTTCTACTGCCACTGGTTGGTGTGTGATTGCTTCGTTCCTGTTAAGTGCAATTGCTGGAGCAGGTTATCTGGTTTATTTGATTGAAAGAGCAAAGAAGTGCTTAGATTTTGCAGCCACACTCTATATATTCCACCTTTTCATTTGTATCGTTTATGGAGGGTGGCCTTCCTCAATGACGTGGTGGGTTGTGAACGGAACTGGGCTTGTAGTCATGTCTTTACTGGGTGAATACCTGTGCATCAAGCGGGAGCTTCGAGAAATTCCTATAACACGATTGCGTTCAAATGTCTGAGCTCAAAATTCAAATTGCAAGAACCACCTCTTCATGCATGATTTTTTGGTGGCCTATCTTATTAAATTTGTTTAGCTAGTGGATAAAGCTGATGAAAAGCCAGATCAAATGAGAATCAAGGAAGAGGAACTAGTTATGATGATTGACCGTAAATATCGAAAATAACCTAGATCAGTGCGCTGGACTATGATCTAGTGTTTCGAAGCTTTACACAAGTACAGGAAGTTTTTGTAACTTTTTGAGGAATGGGTCACTTCCAATGGTGAAAACAGGCGATGACTGATGGCTATAAAGCTTTGTTTGTTCCTTTTCTTGTTTTAATGGTTAAAGGATATATATTGTTAGTTGCTTTTATTCATTTAATTCCTTCATACAGATGAGTTTACAGCTTAGTTTGGAATGAGACTTCTTTTACTCCTCATTTTGCAATGCGAAGTTTCAATGATAGTGAATAGCCATGAATATAATGAAAATTTAGCATAACT

Coding sequence (CDS)

ATGTTCTATGGTGCAGGGGTATGGGACCCTTGGCTCATTGTTGCCCAAATTGTTTGCCTTCAATGTTTCTATTACCTCACTCTTGGTATATTCCTTGCAACTTTAGTCGGCACTCGCGTTTCTCGGATCAGCCTTGTTTACTTCTTTGATTATGCTACAATAACTGTTTCTACTGCCACTGGTTGGTGTGTGATTGCTTCGTTCCTGTTAAGTGCAATTGCTGGAGCAGGTTATCTGGTTTATTTGATTGAAAGAGCAAAGAAGTGCTTAGATTTTGCAGCCACACTCTATATATTCCACCTTTTCATTTGTATCGTTTATGGAGGGTGGCCTTCCTCAATGACGTGGTGGGTTGTGAACGGAACTGGGCTTGTAGTCATGTCTTTACTGGGTGAATACCTGTGCATCAAGCGGGAGCTTCGAGAAATTCCTATAACACGATTGCGTTCAAATGTCTGA

Protein sequence

MFYGAGVWDPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV

Homology

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BLAST of MELO3C024227 vs. NCBI nr
Match: XP_008462142.1 (PREDICTED: protein SYS1 homolog [Cucumis melo])

HSP 1 Score: 304.7 bits (779), Expect = 4.5e-79
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MFYGAGVWDPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYGAGVWDPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTAT
Sbjct: 1   MFYGAGVWDPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTAT 60

Query: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVYGGWPSSMTWWVVN 120
           GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVYGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 153
           GTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

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BLAST of MELO3C024227 vs. NCBI nr
Match: XP_011659561.1 (protein SYS1 homolog [Cucumis sativus] >KGN45351.1 hypothetical protein Csa_016132 [Cucumis sativus])

HSP 1 Score: 297.0 bits (759), Expect = 9.4e-77
Identity = 148/152 (97.37%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MFYGAGVWDPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYGA VWDPWLIVAQIVCLQCFYYLTLGI LATLVGTRVSRISLVYFFDYATI+VSTAT
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTAT 60

Query: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVYGGWPSSMTWWVVN 120
           GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICI+YGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 153
           GTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

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BLAST of MELO3C024227 vs. NCBI nr
Match: XP_038898906.1 (protein SYS1 homolog [Benincasa hispida])

HSP 1 Score: 296.2 bits (757), Expect = 1.6e-76
Identity = 148/152 (97.37%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MFYGAGVWDPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYGA VWDPWLIVAQIVCLQC YYLTLGI LATLVGTRVSRISLVYFFDYATITVSTAT
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILLATLVGTRVSRISLVYFFDYATITVSTAT 60

Query: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVYGGWPSSMTWWVVN 120
           GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICI+YGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 153
           GTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

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BLAST of MELO3C024227 vs. NCBI nr
Match: XP_022953394.1 (protein SYS1 homolog [Cucurbita moschata] >KAG7014094.1 Protein SYS1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 289.3 bits (739), Expect = 2.0e-74
Identity = 145/152 (95.39%), Postives = 147/152 (96.71%), Query Frame = 0


Query: 1   MFYGAGVWDPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYGA VWDPWLIVAQIVCLQC YYLTLGI +ATLVGTRVSRISLVYFFDYATITVSTAT
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60

Query: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVYGGWPSSMTWWVVN 120
           GWCVIASFLLSA+AGA YLVYLIERAKKCLDFAATLYI HLFICIVYGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 153
           GTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

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BLAST of MELO3C024227 vs. NCBI nr
Match: XP_023547444.1 (protein SYS1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 288.9 bits (738), Expect = 2.6e-74
Identity = 144/152 (94.74%), Postives = 147/152 (96.71%), Query Frame = 0


Query: 1   MFYGAGVWDPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYGA VWDPWLIVAQIVCLQC YYLTLGI +ATLVGTRVSRISLVYFFDYATITVSTAT
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60

Query: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVYGGWPSSMTWWVVN 120
           GWCVIASFLLSA+AGA YL+YLIERAKKCLDFAATLYI HLFICIVYGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSALAGAVYLIYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 153
           GTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

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BLAST of MELO3C024227 vs. ExPASy Swiss-Prot
Match: Q55E69 (Protein SYS1 homolog OS=Dictyostelium discoideum OX=44689 GN=sys1 PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 5.5e-27
Identity = 58/147 (39.46%), Postives = 94/147 (63.95%), Query Frame = 0


Query: 1   MFYGAGVWDPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFY    WDP LI+ QI+ +QC YY+ L   L  L     S +SL   F+Y +I   + +
Sbjct: 1   MFYKYNAWDPKLIIGQILSIQCLYYILLAGILYLLDSMFSSSLSLEQMFEYQSINTHSQS 60

Query: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVYGGWPSSMTWWVVN 120
           G  V+ +FL++++ G+  L Y++ER+KKCLD +AT+   H  I  +  G+P ++ WW + 
Sbjct: 61  GRVVMTAFLINSLFGSFCLKYIVERSKKCLDHSATVTFIHFIIVWIVSGFPKTVVWWAIQ 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITR 148
             G+V+M+++GEYLC+++EL +IP+ R
Sbjct: 121 LIGMVIMAMIGEYLCMRKELMDIPLQR 147

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BLAST of MELO3C024227 vs. ExPASy Swiss-Prot
Match: A7S6Y0 (Protein SYS1 homolog OS=Nematostella vectensis OX=45351 GN=sys1 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.0e-25
Identity = 55/144 (38.19%), Postives = 96/144 (66.67%), Query Frame = 0


Query: 3   YGAGVWDPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTATGW 62
           +   VWDP LI++QI+ +QC +Y++LG+++  +     S  SL  FF Y  + +S+  G 
Sbjct: 5   FRTNVWDPVLIISQIIAIQCTFYISLGVWVLIVDYWSGSIHSLDQFFAYKELDISSLKGK 64

Query: 63  CVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVYGGWPSSMTWWVVNGT 122
            ++ +F L+++ GA  L ++++RAK+CLDF  T +I HL  C +Y G+P S TWW++N  
Sbjct: 65  LLMIAFCLNSLTGAMALWFIVKRAKQCLDFTTTAHIVHLVFCCIYAGFPFSWTWWLLNII 124

Query: 123 GLVVMSLLGEYLCIKRELREIPIT 147
            L +M+++GE++C+K EL+ I ++
Sbjct: 125 CLALMAVIGEFVCMKTELKAIKVS 148

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BLAST of MELO3C024227 vs. ExPASy Swiss-Prot
Match: Q8N2H4 (Protein SYS1 homolog OS=Homo sapiens OX=9606 GN=SYS1 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.9e-24
Identity = 65/148 (43.92%), Postives = 95/148 (64.19%), Query Frame = 0


Query: 7   VWDPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTATGWCVIA 66
           VWDP LI++QIV +Q  YY +LG++LA + G   S  SL   FD   +  ST  G   + 
Sbjct: 9   VWDPLLILSQIVLMQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTPPGRLSMM 68

Query: 67  SFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVYGG-WPSSMTWWVVNGTGLV 126
           SF+L+A+  A  L+Y I R K+CLDF  T++ FHL  C  Y   +PS++TWW+V    + 
Sbjct: 69  SFILNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALTWWLVQAVCIA 128

Query: 127 VMSLLGEYLCIKRELREIPITRL-RSNV 153
           +M+++GEYLC++ EL+EIP+    +SNV
Sbjct: 129 LMAVIGEYLCMRTELKEIPLNSAPKSNV 156

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BLAST of MELO3C024227 vs. ExPASy Swiss-Prot
Match: A4K2N5 (Protein SYS1 homolog OS=Papio anubis OX=9555 GN=SYS1 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.9e-24
Identity = 65/148 (43.92%), Postives = 95/148 (64.19%), Query Frame = 0


Query: 7   VWDPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTATGWCVIA 66
           VWDP LI++QIV +Q  YY +LG++LA + G   S  SL   FD   +  ST  G   + 
Sbjct: 9   VWDPLLILSQIVLMQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTPPGRLSMM 68

Query: 67  SFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVYGG-WPSSMTWWVVNGTGLV 126
           SF+L+A+  A  L+Y I R K+CLDF  T++ FHL  C  Y   +PS++TWW+V    + 
Sbjct: 69  SFILNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALTWWLVQAVCIA 128

Query: 127 VMSLLGEYLCIKRELREIPITRL-RSNV 153
           +M+++GEYLC++ EL+EIP+    +SNV
Sbjct: 129 LMAVIGEYLCMRTELKEIPLNSAPKSNV 156

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BLAST of MELO3C024227 vs. ExPASy Swiss-Prot
Match: A4K2W1 (Protein SYS1 homolog OS=Pongo abelii OX=9601 GN=SYS1 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.9e-24
Identity = 65/148 (43.92%), Postives = 95/148 (64.19%), Query Frame = 0


Query: 7   VWDPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTATGWCVIA 66
           VWDP LI++QIV +Q  YY +LG++LA + G   S  SL   FD   +  ST  G   + 
Sbjct: 9   VWDPLLILSQIVLMQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTPPGRLSMM 68

Query: 67  SFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVYGG-WPSSMTWWVVNGTGLV 126
           SF+L+A+  A  L+Y I R K+CLDF  T++ FHL  C  Y   +PS++TWW+V    + 
Sbjct: 69  SFILNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALTWWLVQAVCIA 128

Query: 127 VMSLLGEYLCIKRELREIPITRL-RSNV 153
           +M+++GEYLC++ EL+EIP+    +SNV
Sbjct: 129 LMAVIGEYLCMRTELKEIPLNSAPKSNV 156

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BLAST of MELO3C024227 vs. ExPASy TrEMBL
Match: A0A1S3CGS5 (Protein SYS1 homolog OS=Cucumis melo OX=3656 GN=LOC103500569 PE=3 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.2e-79
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MFYGAGVWDPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYGAGVWDPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTAT
Sbjct: 1   MFYGAGVWDPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTAT 60

Query: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVYGGWPSSMTWWVVN 120
           GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVYGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 153
           GTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

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BLAST of MELO3C024227 vs. ExPASy TrEMBL
Match: A0A0A0KC23 (Protein SYS1 homolog OS=Cucumis sativus OX=3659 GN=Csa_7G446680 PE=3 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 4.6e-77
Identity = 148/152 (97.37%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MFYGAGVWDPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYGA VWDPWLIVAQIVCLQCFYYLTLGI LATLVGTRVSRISLVYFFDYATI+VSTAT
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTAT 60

Query: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVYGGWPSSMTWWVVN 120
           GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICI+YGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 153
           GTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of MELO3C024227 vs. ExPASy TrEMBL
Match: A0A6J1GPI7 (Protein SYS1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111455962 PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 9.5e-75
Identity = 145/152 (95.39%), Postives = 147/152 (96.71%), Query Frame = 0


Query: 1   MFYGAGVWDPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYGA VWDPWLIVAQIVCLQC YYLTLGI +ATLVGTRVSRISLVYFFDYATITVSTAT
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60

Query: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVYGGWPSSMTWWVVN 120
           GWCVIASFLLSA+AGA YLVYLIERAKKCLDFAATLYI HLFICIVYGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 153
           GTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of MELO3C024227 vs. ExPASy TrEMBL
Match: A0A6J1CPG7 (Protein SYS1 homolog OS=Momordica charantia OX=3673 GN=LOC111013526 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.2e-74
Identity = 142/152 (93.42%), Postives = 147/152 (96.71%), Query Frame = 0


Query: 1   MFYGAGVWDPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYG  VWDPWLIVAQIVC+QC YY+TLGI LATLVGTRVSRISLVYFFDYATITVSTAT
Sbjct: 1   MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTAT 60

Query: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVYGGWPSSMTWWVVN 120
           GWCVIASFLLSA+AGAGYLVYLIERAKKCLDF+ATLYI HLFICI+YGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIHLFICIIYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 153
           GTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of MELO3C024227 vs. ExPASy TrEMBL
Match: A0A6J1JZ66 (Protein SYS1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488736 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.6e-74
Identity = 144/152 (94.74%), Postives = 147/152 (96.71%), Query Frame = 0


Query: 1   MFYGAGVWDPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYGA VWDPWLIVAQIVCLQC YYLTLGI +ATLVGTRVSRISLVYFFDYATITVSTAT
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60

Query: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVYGGWPSSMTWWVVN 120
           GWCVIASFL+SA+AGA YLVYLIERAKKCLDFAATLYI HLFICIVYGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLISALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 153
           GTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of MELO3C024227 vs. TAIR 10
Match: AT1G79990.1 (structural molecules )

HSP 1 Score: 238.0 bits (606), Expect = 4.9e-63
Identity = 111/151 (73.51%), Postives = 127/151 (84.11%), Query Frame = 0


Query: 1   MFYGAGVWDPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYG  VWDPWLIV QI+CLQC YYLTLG+F    +G RV R+SLVYFFDYAT+T ST T
Sbjct: 1   MFYGTAVWDPWLIVGQIICLQCSYYLTLGLFTMVFLGLRVPRLSLVYFFDYATLTTSTFT 60

Query: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVYGGWPSSMTWWVVN 120
           GW VIASFL S++AGA Y+++L+ERA+KCLDF+ATLYI HLF CI+YGGWPSSM WWVVN
Sbjct: 61  GWSVIASFLFSSLAGAVYMIFLVERARKCLDFSATLYIIHLFFCIMYGGWPSSMAWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSN 152
           GTGL VM+LL EYLCIKRE REIP+ R  SN
Sbjct: 121 GTGLAVMALLAEYLCIKREQREIPMDRFHSN 151

[Close]

BLAST of MELO3C024227 vs. TAIR 10
Match: AT1G79990.2 (structural molecules )

HSP 1 Score: 237.3 bits (604), Expect = 8.3e-63
Identity = 111/152 (73.03%), Postives = 127/152 (83.55%), Query Frame = 0


Query: 1   MFYGAGVWDPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYG  VWDPWLIV QI+CLQC YYLTLG+F    +G RV R+SLVYFFDYAT+T ST T
Sbjct: 1   MFYGTAVWDPWLIVGQIICLQCSYYLTLGLFTMVFLGLRVPRLSLVYFFDYATLTTSTFT 60

Query: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVYGGWPSSMTWWVVN 120
           GW VIASFL S++AGA Y+++L+ERA+KCLDF+ATLYI HLF CI+YGGWPSSM WWVVN
Sbjct: 61  GWSVIASFLFSSLAGAVYMIFLVERARKCLDFSATLYIIHLFFCIMYGGWPSSMAWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 153
           GTGL VM+LL EYLCIKRE REIP+ R  S V
Sbjct: 121 GTGLAVMALLAEYLCIKREQREIPMDRFHSRV 152

[Close]

BLAST of MELO3C024227 vs. TAIR 10
Match: AT1G79990.4 (structural molecules )

HSP 1 Score: 237.3 bits (604), Expect = 8.3e-63
Identity = 111/152 (73.03%), Postives = 127/152 (83.55%), Query Frame = 0


Query: 1   MFYGAGVWDPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYG  VWDPWLIV QI+CLQC YYLTLG+F    +G RV R+SLVYFFDYAT+T ST T
Sbjct: 1   MFYGTAVWDPWLIVGQIICLQCSYYLTLGLFTMVFLGLRVPRLSLVYFFDYATLTTSTFT 60

Query: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVYGGWPSSMTWWVVN 120
           GW VIASFL S++AGA Y+++L+ERA+KCLDF+ATLYI HLF CI+YGGWPSSM WWVVN
Sbjct: 61  GWSVIASFLFSSLAGAVYMIFLVERARKCLDFSATLYIIHLFFCIMYGGWPSSMAWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 153
           GTGL VM+LL EYLCIKRE REIP+ R  S V
Sbjct: 121 GTGLAVMALLAEYLCIKREQREIPMDRFHSRV 152

The following BLAST results are available for this feature:

BLAST of MELO3C024227 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462142.1	4.5e-79	100.00	PREDICTED: protein SYS1 homolog [Cucumis melo]	[more]
XP_011659561.1	9.4e-77	97.37	protein SYS1 homolog [Cucumis sativus] >KGN45351.1 hypothetical protein Csa_0161...	[more]
XP_038898906.1	1.6e-76	97.37	protein SYS1 homolog [Benincasa hispida]	[more]
XP_022953394.1	2.0e-74	95.39	protein SYS1 homolog [Cucurbita moschata] >KAG7014094.1 Protein SYS1-like protei...	[more]
XP_023547444.1	2.6e-74	94.74	protein SYS1 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C024227 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q55E69	5.5e-27	39.46	Protein SYS1 homolog OS=Dictyostelium discoideum OX=44689 GN=sys1 PE=3 SV=1	[more]
A7S6Y0	3.0e-25	38.19	Protein SYS1 homolog OS=Nematostella vectensis OX=45351 GN=sys1 PE=3 SV=1	[more]
Q8N2H4	1.9e-24	43.92	Protein SYS1 homolog OS=Homo sapiens OX=9606 GN=SYS1 PE=1 SV=1	[more]
A4K2N5	1.9e-24	43.92	Protein SYS1 homolog OS=Papio anubis OX=9555 GN=SYS1 PE=3 SV=1	[more]
A4K2W1	1.9e-24	43.92	Protein SYS1 homolog OS=Pongo abelii OX=9601 GN=SYS1 PE=3 SV=1	[more]

BLAST of MELO3C024227 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CGS5	2.2e-79	100.00	Protein SYS1 homolog OS=Cucumis melo OX=3656 GN=LOC103500569 PE=3 SV=1	[more]
A0A0A0KC23	4.6e-77	97.37	Protein SYS1 homolog OS=Cucumis sativus OX=3659 GN=Csa_7G446680 PE=3 SV=1	[more]
A0A6J1GPI7	9.5e-75	95.39	Protein SYS1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111455962 PE=3 SV=1	[more]
A0A6J1CPG7	1.2e-74	93.42	Protein SYS1 homolog OS=Momordica charantia OX=3673 GN=LOC111013526 PE=3 SV=1	[more]
A0A6J1JZ66	1.6e-74	94.74	Protein SYS1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488736 PE=3 SV=1	[more]

BLAST of MELO3C024227 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79990.1	4.9e-63	73.51	structural molecules	[more]
AT1G79990.2	8.3e-63	73.03	structural molecules	[more]
AT1G79990.4	8.3e-63	73.03	structural molecules	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019185	Integral membrane protein SYS1-related	PFAM	PF09801	SYS1	coord: 6..144 e-value: 6.3E-45 score: 152.9
IPR019185	Integral membrane protein SYS1-related	PANTHER	PTHR12952	SYS1	coord: 1..151
IPR016973	Integral membrane protein SYS1	PIRSF	PIRSF031402	SYS1_homolog	coord: 1..152 e-value: 1.6E-57 score: 191.8
None	No IPR available	PANTHER	PTHR12952:SF3	PROTEIN SYS1 HOMOLOG	coord: 1..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C024227.1	MELO3C024227.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0000139	Golgi membrane