MELO3C024170 (gene) Melon (DHL92) v4

Overview
NameMELO3C024170
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionEnvelope-like protein
Locationchr01: 4501398 .. 4501679 (+)
RNA-Seq ExpressionMELO3C024170
SyntenyMELO3C024170
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGAGTCAAAACCTGCCAAAAGCCATCCACCTTCTTCTTCGCTACCATTCGCAACACCAACACTAGATATGGTTCCTCTTGCTGAACCTACTAGTTATATAGATTCTGATATTGGTGATGACAATGCTGTTAATGACTCCCCGTTGTCAATAGATGATGTCCCTTCTCCTGTACGTACTACTGATAATCCTGAAGTGACTATGGGAGATAAAACTGCTGATCCTCATTCTGAGATCCCTACTCCTACTTCTTTCTACTCTGTCTGTTTCTCCTGCTAA

mRNA sequence

ATGCATGAGTCAAAACCTGCCAAAAGCCATCCACCTTCTTCTTCGCTACCATTCGCAACACCAACACTAGATATGGTTCCTCTTGCTGAACCTACTAGTTATATAGATTCTGATATTGGTGATGACAATGCTGTTAATGACTCCCCGTTGTCAATAGATGATGTCCCTTCTCCTGTACGTACTACTGATAATCCTGAAGTGACTATGGGAGATAAAACTGCTGATCCTCATTCTGAGATCCCTACTCCTACTTCTTTCTACTCTGTCTGTTTCTCCTGCTAA

Coding sequence (CDS)

ATGCATGAGTCAAAACCTGCCAAAAGCCATCCACCTTCTTCTTCGCTACCATTCGCAACACCAACACTAGATATGGTTCCTCTTGCTGAACCTACTAGTTATATAGATTCTGATATTGGTGATGACAATGCTGTTAATGACTCCCCGTTGTCAATAGATGATGTCCCTTCTCCTGTACGTACTACTGATAATCCTGAAGTGACTATGGGAGATAAAACTGCTGATCCTCATTCTGAGATCCCTACTCCTACTTCTTTCTACTCTGTCTGTTTCTCCTGCTAA

Protein sequence

MHESKPAKSHPPSSSLPFATPTLDMVPLAEPTSYIDSDIGDDNAVNDSPLSIDDVPSPVRTTDNPEVTMGDKTADPHSEIPTPTSFYSVCFSC
Homology
[Close]
BLAST of MELO3C024170 vs. NCBI nr
Match: TYK26099.1 (envelope-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 68.9 bits (167), Expect = 2.6e-08
Identity = 42/85 (49.41%), Postives = 51/85 (60.00%), Query Frame = 0 

Query: 1   MHESKPAKSHPPSSSLPFATPTLDMVPLAEPTSYIDSDIGDDNAVNDSPLSIDDVPSPVR 60
           MHESK  + H   S  P   PT  M P    +S++  DI DDNAVN SP+S+DDVPSPVR
Sbjct: 24  MHESKLVERHSSLSPRPSTMPTPSMAP-PNTSSHVKYDIPDDNAVNSSPVSMDDVPSPVR 83

Query: 61  TTDNPEVTMGDKTADPHSEIPTPTS 86
            T N  V + D T D   EIP+P +
Sbjct: 84  ITVNTRVFVEDTTNDRRFEIPSPAA 107

[Close]
BLAST of MELO3C024170 vs. NCBI nr
Match: KAA0059659.1 (envelope-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 68.9 bits (167), Expect = 2.6e-08
Identity = 42/85 (49.41%), Postives = 51/85 (60.00%), Query Frame = 0 

Query: 1   MHESKPAKSHPPSSSLPFATPTLDMVPLAEPTSYIDSDIGDDNAVNDSPLSIDDVPSPVR 60
           MHESK  + H   S  P   PT  M P    +S++  DI DDNAVN SP+S+DDVPSPVR
Sbjct: 24  MHESKLVERHSSLSPRPSTMPTPSMAP-PNTSSHVKYDIPDDNAVNSSPVSMDDVPSPVR 83

Query: 61  TTDNPEVTMGDKTADPHSEIPTPTS 86
            T N  V + D T D   EIP+P +
Sbjct: 84  ITVNTRVFVEDTTNDRRFEIPSPAA 107

[Close]
BLAST of MELO3C024170 vs. ExPASy TrEMBL
Match: A0A5A7V1K3 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold54G00990 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.2e-08
Identity = 42/85 (49.41%), Postives = 51/85 (60.00%), Query Frame = 0 

Query: 1   MHESKPAKSHPPSSSLPFATPTLDMVPLAEPTSYIDSDIGDDNAVNDSPLSIDDVPSPVR 60
           MHESK  + H   S  P   PT  M P    +S++  DI DDNAVN SP+S+DDVPSPVR
Sbjct: 24  MHESKLVERHSSLSPRPSTMPTPSMAP-PNTSSHVKYDIPDDNAVNSSPVSMDDVPSPVR 83

Query: 61  TTDNPEVTMGDKTADPHSEIPTPTS 86
            T N  V + D T D   EIP+P +
Sbjct: 84  ITVNTRVFVEDTTNDRRFEIPSPAA 107

[Close]
BLAST of MELO3C024170 vs. ExPASy TrEMBL
Match: A0A5D3DRS1 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00030 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.2e-08
Identity = 42/85 (49.41%), Postives = 51/85 (60.00%), Query Frame = 0 

Query: 1   MHESKPAKSHPPSSSLPFATPTLDMVPLAEPTSYIDSDIGDDNAVNDSPLSIDDVPSPVR 60
           MHESK  + H   S  P   PT  M P    +S++  DI DDNAVN SP+S+DDVPSPVR
Sbjct: 24  MHESKLVERHSSLSPRPSTMPTPSMAP-PNTSSHVKYDIPDDNAVNSSPVSMDDVPSPVR 83

Query: 61  TTDNPEVTMGDKTADPHSEIPTPTS 86
            T N  V + D T D   EIP+P +
Sbjct: 84  ITVNTRVFVEDTTNDRRFEIPSPAA 107

The following BLAST results are available for this feature:
BLAST of MELO3C024170 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK26099.12.6e-0849.41envelope-like protein [Cucumis melo var. makuwa][more]
KAA0059659.12.6e-0849.41envelope-like protein [Cucumis melo var. makuwa][more]
BLAST of MELO3C024170 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C024170 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V1K31.2e-0849.41Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold54... [more]
A0A5D3DRS11.2e-0849.41Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11... [more]
BLAST of MELO3C024170 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..80

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C024170.1MELO3C024170.1mRNA