MELO3C024163 (gene) Melon (DHL92) v4

Overview


Name	MELO3C024163
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Acanthoscurrin-1-like
Location	chr01: 4649353 .. 4650137 (+)
RNA-Seq Expression	MELO3C024163
Synteny	MELO3C024163

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACACACAAACACAAGTGTAAGTGCAAGTGTAAGTGTTACACAAAGAGTTAGAATTAAGAAGAAAATGGCAAAATTGTTCATGGCTTTGCTCTTGGCTCTTGTGGCCACTCATGCCCTAGCTAGACCTACACCAAAGGATGACACGTTCAGTGACCAAAAGAACTTCCTGACCTATGGTGGCGTCGGTGGCTACTCTGGCATCGGCAGTAATGGCCTCCCGTTTGGTGGTGTGGGGGGTGCCATTGGAGGAGGAGGCCTTGGTGGCGGTCTTGGTGGTGGCCTCGGTGGCGCTACGGGAATTGGTGGAGGACTAGGTGGACTGGGAGGTACTGGAGGTGGATTGGGTGGCATTGGTGGAACCACTGGTGGCCTCGGCGGTGGTCTCGGCGGTGGACTCGGTGGTGGACTCGGTGGTGGTCTCGGTGGCGGTGTCGGTGGAGCTTCTGGTGTTACTTATCCTTGAAAAGTTATTTAGTTATGCTTGATGATTTTTACTCAAAAAGTTCTTGCAGTTTAAAGTTTGTTTGATTAATATTGTGTCAAGAGATGTAGTTGTTTAGTTGTTGCTTAATGACCTTATAGCATTTGGTTGTGTTTGGTTTTCTATTTAAATTTGGTTTGTGATTATCTTTTGTTTGTTCACTTTTGTTAGTATAAAACAAACATCTGCTTTAGTTGTTCCTTTTTTTTTTTTTTTTTTGGTTTATATATTTATATTATATTAATGAAAAATGAATGGGTTTTATGCATACTTTTATCCAATATATATATGTAGTAATAGTTT

mRNA sequence

CACACACAAACACAAGTGTAAGTGCAAGTGTAAGTGTTACACAAAGAGTTAGAATTAAGAAGAAAATGGCAAAATTGTTCATGGCTTTGCTCTTGGCTCTTGTGGCCACTCATGCCCTAGCTAGACCTACACCAAAGGATGACACGTTCAGTGACCAAAAGAACTTCCTGACCTATGGTGGCGTCGGTGGCTACTCTGGCATCGGCAGTAATGGCCTCCCGTTTGGTGGTGTGGGGGGTGCCATTGGAGGAGGAGGCCTTGGTGGCGGTCTTGGTGGTGGCCTCGGTGGCGCTACGGGAATTGGTGGAGGACTAGGTGGACTGGGAGGTACTGGAGGTGGATTGGGTGGCATTGGTGGAACCACTGGTGGCCTCGGCGGTGGTCTCGGCGGTGGACTCGGTGGTGGACTCGGTGGTGGTCTCGGTGGCGGTGTCGGTGGAGCTTCTGGTGTTACTTATCCTTGAAAAGTTATTTAGTTATGCTTGATGATTTTTACTCAAAAAGTTCTTGCAGTTTAAAGTTTGTTTGATTAATATTGTGTCAAGAGATGTAGTTGTTTAGTTGTTGCTTAATGACCTTATAGCATTTGGTTGTGTTTGGTTTTCTATTTAAATTTGGTTTGTGATTATCTTTTGTTTGTTCACTTTTGTTAGTATAAAACAAACATCTGCTTTAGTTGTTCCTTTTTTTTTTTTTTTTTTGGTTTATATATTTATATTATATTAATGAAAAATGAATGGGTTTTATGCATACTTTTATCCAATATATATATGTAGTAATAGTTT

Coding sequence (CDS)

ATGGCAAAATTGTTCATGGCTTTGCTCTTGGCTCTTGTGGCCACTCATGCCCTAGCTAGACCTACACCAAAGGATGACACGTTCAGTGACCAAAAGAACTTCCTGACCTATGGTGGCGTCGGTGGCTACTCTGGCATCGGCAGTAATGGCCTCCCGTTTGGTGGTGTGGGGGGTGCCATTGGAGGAGGAGGCCTTGGTGGCGGTCTTGGTGGTGGCCTCGGTGGCGCTACGGGAATTGGTGGAGGACTAGGTGGACTGGGAGGTACTGGAGGTGGATTGGGTGGCATTGGTGGAACCACTGGTGGCCTCGGCGGTGGTCTCGGCGGTGGACTCGGTGGTGGACTCGGTGGTGGTCTCGGTGGCGGTGTCGGTGGAGCTTCTGGTGTTACTTATCCTTGA

Protein sequence

MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAIGGGGLGGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGLGGGLGGGLGGGLGGGVGGASGVTYP

Homology

[Close]

BLAST of MELO3C024163 vs. NCBI nr
Match: KAA0050560.1 (acanthoscurrin-1-like [Cucumis melo var. makuwa] >TYK18800.1 acanthoscurrin-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 198.0 bits (502), Expect = 5.2e-47
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAI 60
           MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAI
Sbjct: 1   MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAI 60

Query: 61  GGGGLGGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGLGGGLGGGLGGGLG 120
           GGGGLGGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGLGGGLGGGLGGGLG
Sbjct: 61  GGGGLGGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGLGGGLGGGLGGGLG 120

Query: 121 GGVGGASGVTYP 133
           GGVGGASGVTYP
Sbjct: 121 GGVGGASGVTYP 132

[Close]

BLAST of MELO3C024163 vs. NCBI nr
Match: XP_008462124.1 (PREDICTED: acanthoscurrin-1-like [Cucumis melo])

HSP 1 Score: 189.5 bits (480), Expect = 1.8e-44
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 6   MALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAIGGGGL 65
           MALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAIGGGGL
Sbjct: 1   MALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAIGGGGL 60

Query: 66  GGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGLGGGLGGGLGGGLGGGVGG 125
           GGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGLGGGLGGGLGGGLGGGVGG
Sbjct: 61  GGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGLGGGLGGGLGGGLGGGVGG 120

Query: 126 ASGVTYP 133
           ASGVTYP
Sbjct: 121 ASGVTYP 127

[Close]

BLAST of MELO3C024163 vs. NCBI nr
Match: XP_011659762.1 (glycine-rich protein 5 [Cucumis sativus])

HSP 1 Score: 175.3 bits (443), Expect = 3.6e-40
Identity = 123/136 (90.44%), Postives = 125/136 (91.91%), Query Frame = 0


Query: 1   MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAI 60
           MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIG+NGLPFGG+GGAI
Sbjct: 1   MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGNNGLPFGGLGGAI 60

Query: 61  G----GGGLGGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGLGGGLGGGLG 120
           G    GGGLGGGLGGGLGG TGIGGGLGGLGG GGG GGIGGTT    GGLGGGLGGGLG
Sbjct: 61  GGGGLGGGLGGGLGGGLGGGTGIGGGLGGLGGPGGGFGGIGGTT----GGLGGGLGGGLG 120

Query: 121 GGLGGGVGGASGVTYP 133
           GGLGGGVGGASGVTYP
Sbjct: 121 GGLGGGVGGASGVTYP 132

[Close]

BLAST of MELO3C024163 vs. NCBI nr
Match: KAE8646236.1 (hypothetical protein Csa_016187 [Cucumis sativus])

HSP 1 Score: 175.3 bits (443), Expect = 3.6e-40
Identity = 123/136 (90.44%), Postives = 125/136 (91.91%), Query Frame = 0


Query: 1   MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAI 60
           MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIG+NGLPFGG+GGAI
Sbjct: 38  MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGNNGLPFGGLGGAI 97

Query: 61  G----GGGLGGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGLGGGLGGGLG 120
           G    GGGLGGGLGGGLGG TGIGGGLGGLGG GGG GGIGGTT    GGLGGGLGGGLG
Sbjct: 98  GGGGLGGGLGGGLGGGLGGGTGIGGGLGGLGGPGGGFGGIGGTT----GGLGGGLGGGLG 157

Query: 121 GGLGGGVGGASGVTYP 133
           GGLGGGVGGASGVTYP
Sbjct: 158 GGLGGGVGGASGVTYP 169

[Close]

BLAST of MELO3C024163 vs. NCBI nr
Match: XP_038898765.1 (acanthoscurrin-1-like [Benincasa hispida])

HSP 1 Score: 146.7 bits (369), Expect = 1.4e-31
Identity = 115/136 (84.56%), Postives = 117/136 (86.03%), Query Frame = 0


Query: 1   MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAI 60
           MAKLFMALLLALVAT  LARPTP + TF+DQKNFLTYGGVGGYSGIG NGLPFGGVGGAI
Sbjct: 1   MAKLFMALLLALVATTTLARPTPNEATFNDQKNFLTYGGVGGYSGIGGNGLPFGGVGGAI 60

Query: 61  G----GGGLGGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGLGGGLGGGLG 120
           G    GGGLGGGLGGGLGGATGI GGLGGLGG GGGLG  GG  GG  GG  GGLGGGLG
Sbjct: 61  GGTGLGGGLGGGLGGGLGGATGI-GGLGGLGGVGGGLG--GGGLGGTIGGTTGGLGGGLG 120

Query: 121 GGLGGGVGGASGVTYP 133
           GGLGGGVGGASGVTYP
Sbjct: 121 GGLGGGVGGASGVTYP 133

[Close]

BLAST of MELO3C024163 vs. ExPASy TrEMBL
Match: A0A5A7U5T7 (Acanthoscurrin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold945G00150 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.5e-47
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAI 60
           MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAI
Sbjct: 1   MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAI 60

Query: 61  GGGGLGGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGLGGGLGGGLGGGLG 120
           GGGGLGGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGLGGGLGGGLGGGLG
Sbjct: 61  GGGGLGGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGLGGGLGGGLGGGLG 120

Query: 121 GGVGGASGVTYP 133
           GGVGGASGVTYP
Sbjct: 121 GGVGGASGVTYP 132

[Close]

BLAST of MELO3C024163 vs. ExPASy TrEMBL
Match: A0A1S3CGR1 (acanthoscurrin-1-like OS=Cucumis melo OX=3656 GN=LOC103500553 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 8.9e-45
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 6   MALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAIGGGGL 65
           MALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAIGGGGL
Sbjct: 1   MALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAIGGGGL 60

Query: 66  GGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGLGGGLGGGLGGGLGGGVGG 125
           GGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGLGGGLGGGLGGGLGGGVGG
Sbjct: 61  GGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGLGGGLGGGLGGGLGGGVGG 120

Query: 126 ASGVTYP 133
           ASGVTYP
Sbjct: 121 ASGVTYP 127

[Close]

BLAST of MELO3C024163 vs. ExPASy TrEMBL
Match: A0A0A0K9U1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336450 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.7e-40
Identity = 123/136 (90.44%), Postives = 125/136 (91.91%), Query Frame = 0


Query: 1   MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAI 60
           MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIG+NGLPFGG+GGAI
Sbjct: 1   MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGNNGLPFGGLGGAI 60

Query: 61  G----GGGLGGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGLGGGLGGGLG 120
           G    GGGLGGGLGGGLGG TGIGGGLGGLGG GGG GGIGGTT    GGLGGGLGGGLG
Sbjct: 61  GGGGLGGGLGGGLGGGLGGGTGIGGGLGGLGGPGGGFGGIGGTT----GGLGGGLGGGLG 120

Query: 121 GGLGGGVGGASGVTYP 133
           GGLGGGVGGASGVTYP
Sbjct: 121 GGLGGGVGGASGVTYP 132

[Close]

BLAST of MELO3C024163 vs. ExPASy TrEMBL
Match: A0A6J1CPV7 (glycine-rich protein 23-like OS=Momordica charantia OX=3673 GN=LOC111013480 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.6e-30
Identity = 106/135 (78.52%), Postives = 115/135 (85.19%), Query Frame = 0


Query: 1   MAKLFMALLLALVATHALAR--PTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGG 60
           MAK+FM LLLALVATHA+AR  PTP D TF DQKNF TYGG+GGYSGIG+NGLPFGGVGG
Sbjct: 1   MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGG 60

Query: 61  AIGGGGLGGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGL-GGGLGGGLGG 120
           A+GGGGLGGGLGGGLGG TGIGGGLGGLGGTGGGL   GG  GG+GG + GGG  GGLGG
Sbjct: 61  AVGGGGLGGGLGGGLGGGTGIGGGLGGLGGTGGGL---GGNVGGIGGTIGGGGASGGLGG 120

Query: 121 GLGGGVGGASGVTYP 133
           GLGGG+GG S + YP
Sbjct: 121 GLGGGLGGGSALPYP 132

[Close]

BLAST of MELO3C024163 vs. ExPASy TrEMBL
Match: A0A6J1H8T3 (acanthoscurrin-1-like OS=Cucurbita moschata OX=3662 GN=LOC111461135 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 3.5e-25
Identity = 104/135 (77.04%), Postives = 114/135 (84.44%), Query Frame = 0


Query: 1   MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAI 60
           MAKLFMA+LLAL+ATHALARPTPKD TF+DQKNFLTYGG+GGYSGIGSNGLPFGG+GGA+
Sbjct: 1   MAKLFMAMLLALLATHALARPTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGAV 60

Query: 61  GGGGLGGGLGGGLGGATGIGGGLG-GLGGTGGGLGGIGGTTGG--LGGGLGGGLGGGLGG 120
           GG G  GG+GGG+GG  G GGG G GLGG  GG GG+GGT GG  LGGGLGG +GGGLGG
Sbjct: 61  GGTG-PGGIGGGIGGLGGFGGGGGAGLGGGLGG-GGLGGTMGGGNLGGGLGGTVGGGLGG 120

Query: 121 GLGGGVGGASGVTYP 133
           GLGGGVGG  G   P
Sbjct: 121 GLGGGVGGGGGSGLP 133

[Close]

BLAST of MELO3C024163 vs. TAIR 10
Match: AT4G29030.1 (Putative membrane lipoprotein )

HSP 1 Score: 48.1 bits (113), Expect = 6.2e-06
Identity = 69/135 (51.11%), Postives = 74/135 (54.81%), Query Frame = 0


Query: 1   MAKLFMALLLALVATHAL---ARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVG 60
           MAK F  + L      AL   AR  P     SDQKN+L YG  GGYSG+G NGLPFGGVG
Sbjct: 1   MAKWFFTIFLVFALASALACGARNVPVG--LSDQKNYLGYG--GGYSGVGDNGLPFGGVG 60

Query: 61  GAIGGGGLGGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGLGGGLGGGLGG 120
           G + G       GG L        G GG GG GGGLG  GG  GG G GLGGGLGGG G 
Sbjct: 61  GGVSGP------GGNL--------GYGGFGGAGGGLG--GGLGGGAGSGLGGGLGGGSGI 115

Query: 121 GLGGGVGGASGVTYP 133
           G G   G   GV +P
Sbjct: 121 GAGTSGGSTGGVHFP 115

The following BLAST results are available for this feature:

BLAST of MELO3C024163 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050560.1	5.2e-47	100.00	acanthoscurrin-1-like [Cucumis melo var. makuwa] >TYK18800.1 acanthoscurrin-1-li...	[more]
XP_008462124.1	1.8e-44	100.00	PREDICTED: acanthoscurrin-1-like [Cucumis melo]	[more]
XP_011659762.1	3.6e-40	90.44	glycine-rich protein 5 [Cucumis sativus]	[more]
KAE8646236.1	3.6e-40	90.44	hypothetical protein Csa_016187 [Cucumis sativus]	[more]
XP_038898765.1	1.4e-31	84.56	acanthoscurrin-1-like [Benincasa hispida]	[more]

BLAST of MELO3C024163 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C024163 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U5T7	2.5e-47	100.00	Acanthoscurrin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94...	[more]
A0A1S3CGR1	8.9e-45	100.00	acanthoscurrin-1-like OS=Cucumis melo OX=3656 GN=LOC103500553 PE=4 SV=1	[more]
A0A0A0K9U1	1.7e-40	90.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336450 PE=4 SV=1	[more]
A0A6J1CPV7	1.6e-30	78.52	glycine-rich protein 23-like OS=Momordica charantia OX=3673 GN=LOC111013480 PE=4...	[more]
A0A6J1H8T3	3.5e-25	77.04	acanthoscurrin-1-like OS=Cucurbita moschata OX=3662 GN=LOC111461135 PE=4 SV=1	[more]

BLAST of MELO3C024163 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29030.1	6.2e-06	51.11	Putative membrane lipoprotein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34463	GLYCINE-RICH PROTEIN	coord: 1..118
None	No IPR available	PANTHER	PTHR34463:SF11	GLYCINE-RICH PROTEIN	coord: 1..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C024163.1	MELO3C024163.1	mRNA