MELO3C024153 (gene) Melon (DHL92) v4

Overview


Name	MELO3C024153
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Chaperonin Cpn60
Location	chr01: 4975209 .. 4976460 (-)
RNA-Seq Expression	MELO3C024153
Synteny	MELO3C024153

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACCGCTTCGCCCCTGGCTTTGGAAGCAAAGCCAGGTACTACTTTCATCATTTCACTTCTTTCTTCCTCATTCCTTTCTTTCTCATTCCCCCTCTTTTCTTTTTCCAGGTTGGCTAAGAACTCTGCTCGCCAGGTATTTCCCCCCCCCCCCCCCCCCCCCCTTTCTTTTCTTATTCATTTTCTATAGTCTCATCCTGCTTTAACGTCTTAAGTTCTTTTGTTTTGATCATTCCCGAATGTGGGATTTCAGATCAATTCTAGATTCAACTCTAGTAGGAATTATGCATCAAAAGATATTAAATTTGGGTTTGAAGCACGCACCTTGATGCTTAGGGGTGTCGAAGAGCTTGCTGATGCTGTCAAAGTTACAATGGGTCCAAAAGTGAGTTCATGTTCTGTAACTGCAAGACCTCCTATATCTAATTTGTCGCATACTTTAGTGTTTAATTACTGATGATCACTCTTAGTTAATCATTGTGTAGAATAAGTCAGTTGGAGTTCATGATAGGAATGCACATGATCAGGCGTTCCTTTAGGTTGTTTACTGACTGAAATCTTCTTTCCTACTTGTTCTTTCAAGGGACGTAATGTAGTCTTAGAGCAAAGTTTTGGTGCTCCAAAAGTGACAAAAGACGGTGTTACTGTTGCAAAGTGTATCGAATTTGAAGATAAAGTGAAAAATGTTGGGGTGAAGCAGGTTGCAAATGCTACCAATGATGTGGCAGGAGATGGTGAGTCTTTAAAATATATTTATATAGAAAATTCTGTTCTTTCCTTCAAGCATTACATATTCTTGGTTGGCTTGAAAATGCTCAGTTATTTAGGAGAGTTTTTCACATGGTCTGAATTTTTGGAACAGATGCAGCTACTTATATTAGCTCTTTCTTTTCTTATTTCAGGTACAACGTGTGCAACGGTTCTTACTCGTGCAATATTTACTGAAGGATGTAAATCTGTGGCTTCTGGAGTGAATGCTATGGACTTAAGACTGGGGTTACCATGTCAGTTGATTCTGTTATTACAACTCTGAAAAGCAGAGTGCAAATGATCAGCACATCTGAAGAAATAGCACAGGTTTGCACAAATGATCAAAATAGTCTTCTATTTATTTGTCTAAAAGCCAGGTTTCTAATTTTCTAATACTTTTAAGGTTGGAATTATATCAGCAAATGGAGAACGAAAGATTGGTGAGCTAATAGCTAAGGCCATGGAAAAAGTAGGCAAGGAAGGATCATCACCATTTCAGTAA

mRNA sequence

ATGCACCGCTTCGCCCCTGGCTTTGGAAGCAAAGCCAGGTTGGCTAAGAACTCTGCTCGCCAGATCAATTCTAGATTCAACTCTAGTAGGAATTATGCATCAAAAGATATTAAATTTGGGTTTGAAGCACGCACCTTGATGCTTAGGGGTGTCGAAGAGCTTGCTGATGCTGTCAAAGTTACAATGGGTCCAAAAGGACGTAATGTAGTCTTAGAGCAAAGTTTTGGTGCTCCAAAAGTGACAAAAGACGGTGTTACTGTTGCAAAGTGTATCGAATTTGAAGATAAAGTGAAAAATGTTGGGGTGAAGCAGGTTGCAAATGCTACCAATGATGTGGCAGGAGATGGTACAACGTGTGCAACGGTTCTTACTCGTGCAATATTTACTGAAGGATGTAAATCTGTGGCTTCTGGAGTGAATGCTATGGACTTAAGACTGGGAGTGCAAATGATCAGCACATCTGAAGAAATAGCACAGGTTGGAATTATATCAGCAAATGGAGAACGAAAGATTGGTGAGCTAATAGCTAAGGCCATGGAAAAAGTAGGCAAGGAAGGATCATCACCATTTCAGTAA

Coding sequence (CDS)

ATGCACCGCTTCGCCCCTGGCTTTGGAAGCAAAGCCAGGTTGGCTAAGAACTCTGCTCGCCAGATCAATTCTAGATTCAACTCTAGTAGGAATTATGCATCAAAAGATATTAAATTTGGGTTTGAAGCACGCACCTTGATGCTTAGGGGTGTCGAAGAGCTTGCTGATGCTGTCAAAGTTACAATGGGTCCAAAAGGACGTAATGTAGTCTTAGAGCAAAGTTTTGGTGCTCCAAAAGTGACAAAAGACGGTGTTACTGTTGCAAAGTGTATCGAATTTGAAGATAAAGTGAAAAATGTTGGGGTGAAGCAGGTTGCAAATGCTACCAATGATGTGGCAGGAGATGGTACAACGTGTGCAACGGTTCTTACTCGTGCAATATTTACTGAAGGATGTAAATCTGTGGCTTCTGGAGTGAATGCTATGGACTTAAGACTGGGAGTGCAAATGATCAGCACATCTGAAGAAATAGCACAGGTTGGAATTATATCAGCAAATGGAGAACGAAAGATTGGTGAGCTAATAGCTAAGGCCATGGAAAAAGTAGGCAAGGAAGGATCATCACCATTTCAGTAA

Protein sequence

MHRFAPGFGSKARLAKNSARQINSRFNSSRNYASKDIKFGFEARTLMLRGVEELADAVKVTMGPKGRNVVLEQSFGAPKVTKDGVTVAKCIEFEDKVKNVGVKQVANATNDVAGDGTTCATVLTRAIFTEGCKSVASGVNAMDLRLGVQMISTSEEIAQVGIISANGERKIGELIAKAMEKVGKEGSSPFQ

Homology

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BLAST of MELO3C024153 vs. NCBI nr
Match: XP_004139642.1 (chaperonin CPN60-2, mitochondrial [Cucumis sativus] >KGN44557.1 hypothetical protein Csa_015588 [Cucumis sativus])

HSP 1 Score: 310.1 bits (793), Expect = 1.4e-80
Identity = 172/204 (84.31%), Postives = 177/204 (86.76%), Query Frame = 0


Query: 1   MHRFAPGFGSKARLAKNSARQINSRFNSSRNYASKDIKFGFEARTLMLRGVEELADAVKV 60
           MHRFA G  SKARLA NSARQINSRFNSSRNYA+K IKFG EARTLMLRGVEELADAVKV
Sbjct: 1   MHRFASGLASKARLANNSARQINSRFNSSRNYAAKHIKFGVEARTLMLRGVEELADAVKV 60

Query: 61  TMGPKGRNVVLEQSFGAPKVTKDGVTVAKCIEFEDKVKNVG---VKQVANATNDVAGDGT 120
           TMGPKGRNVVLEQSFGAPKVTKDGVTVAK IEFEDKVKNVG   VKQVANATNDVAGDGT
Sbjct: 61  TMGPKGRNVVLEQSFGAPKVTKDGVTVAKSIEFEDKVKNVGASLVKQVANATNDVAGDGT 120

Query: 121 TCATVLTRAIFTEGCKSVASGVNAMDLRLGV---------------QMISTSEEIAQVGI 180
           TCATVLTRAIFTEGCKSVASGVNAMDLR G+               +MISTSEEIAQVG 
Sbjct: 121 TCATVLTRAIFTEGCKSVASGVNAMDLRRGITMAVDSVITTLKSRARMISTSEEIAQVGT 180

Query: 181 ISANGERKIGELIAKAMEKVGKEG 187
           ISANGER+IGELIAKA+EKVGKEG
Sbjct: 181 ISANGEREIGELIAKALEKVGKEG 204

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BLAST of MELO3C024153 vs. NCBI nr
Match: XP_038898854.1 (LOW QUALITY PROTEIN: chaperonin CPN60-2, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 305.4 bits (781), Expect = 3.3e-79
Identity = 167/204 (81.86%), Postives = 175/204 (85.78%), Query Frame = 0


Query: 1   MHRFAPGFGSKARLAKNSARQINSRFNSSRNYASKDIKFGFEARTLMLRGVEELADAVKV 60
           MHRFA G  SK+RLA+NSA QINSRFN SRNYA+KDIKFG EARTLMLRGVEEL DAVKV
Sbjct: 1   MHRFASGLASKSRLARNSAHQINSRFNCSRNYAAKDIKFGVEARTLMLRGVEELVDAVKV 60

Query: 61  TMGPKGRNVVLEQSFGAPKVTKDGVTVAKCIEFEDKVKNVG---VKQVANATNDVAGDGT 120
           TMGPKGRNVVLEQSFG PKVTKDGVTVAK IEF+DKVKN+G   VKQVANATNDVAGDGT
Sbjct: 61  TMGPKGRNVVLEQSFGGPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGT 120

Query: 121 TCATVLTRAIFTEGCKSVASGVNAMDLRLGV---------------QMISTSEEIAQVGI 180
           TCATVLTRAIFTEGCKSVASGVNAMDLR G+               +MISTSEEIAQVG 
Sbjct: 121 TCATVLTRAIFTEGCKSVASGVNAMDLRRGITMAIDSVITTLKSRARMISTSEEIAQVGT 180

Query: 181 ISANGERKIGELIAKAMEKVGKEG 187
           ISANGERKIGEL+AKAMEKVGKEG
Sbjct: 181 ISANGERKIGELLAKAMEKVGKEG 204

[Close]

BLAST of MELO3C024153 vs. NCBI nr
Match: KAA0050614.1 (Chaperonin Cpn60 [Cucumis melo var. makuwa])

HSP 1 Score: 305.4 bits (781), Expect = 3.3e-79
Identity = 163/181 (90.06%), Postives = 165/181 (91.16%), Query Frame = 0


Query: 1   MHRFAPGFGSKARLAKNSARQINSRFNSSRNYASKDIKFGFEARTLMLRGVEELADAVKV 60
           MHRFAPGFGSKARLAKNSARQINSRFNSSRNYASKDIKFGFEARTLMLRGVEELADAVKV
Sbjct: 1   MHRFAPGFGSKARLAKNSARQINSRFNSSRNYASKDIKFGFEARTLMLRGVEELADAVKV 60

Query: 61  TMGPKGRNVVLEQSFGAPKVTKDGVTVAKCIEFEDKVKNVGVKQVANATNDVAGDGTTCA 120
           TMGPKGRNVVLEQSFGAPKVTKDGVTVAKCIEFEDKVKNVGVKQVANATNDVAGDGTTCA
Sbjct: 61  TMGPKGRNVVLEQSFGAPKVTKDGVTVAKCIEFEDKVKNVGVKQVANATNDVAGDGTTCA 120

Query: 121 TVLTRAIFTEGCKSVASGVNAMDLRLGVQMISTSEEIAQVGIISANGERKIGELIAKAME 180
           TVLTRAIFTEGCKSVASGVNAMDLRLG               + +NGERKIGELIAKAME
Sbjct: 121 TVLTRAIFTEGCKSVASGVNAMDLRLG---------------LPSNGERKIGELIAKAME 166

Query: 181 K 182
           K
Sbjct: 181 K 166

[Close]

BLAST of MELO3C024153 vs. NCBI nr
Match: XP_022959552.1 (chaperonin CPN60-2, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 301.6 bits (771), Expect = 4.8e-78
Identity = 166/204 (81.37%), Postives = 175/204 (85.78%), Query Frame = 0


Query: 1   MHRFAPGFGSKARLAKNSARQINSRFNSSRNYASKDIKFGFEARTLMLRGVEELADAVKV 60
           MHRFA G  SKARLA+NSA QINSR N SRNYA+KDIKFG EAR LMLRGVEELADAVKV
Sbjct: 1   MHRFACGLASKARLARNSAHQINSRLNCSRNYAAKDIKFGVEARALMLRGVEELADAVKV 60

Query: 61  TMGPKGRNVVLEQSFGAPKVTKDGVTVAKCIEFEDKVKNVG---VKQVANATNDVAGDGT 120
           TMGPKGRNVVLEQS+GAPKVTKDGVTVAK IEF+DKVKN+G   VKQVANATNDVAGDGT
Sbjct: 61  TMGPKGRNVVLEQSYGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGT 120

Query: 121 TCATVLTRAIFTEGCKSVASGVNAMDLRLGV---------------QMISTSEEIAQVGI 180
           TCATVLTRAIFTEGCKSVA+GVNAMDLR G+               +MISTSEEIAQVG 
Sbjct: 121 TCATVLTRAIFTEGCKSVAAGVNAMDLRRGITMAVDSVITTLKSRARMISTSEEIAQVGT 180

Query: 181 ISANGERKIGELIAKAMEKVGKEG 187
           ISANGER+IGELIAKAMEKVGKEG
Sbjct: 181 ISANGEREIGELIAKAMEKVGKEG 204

[Close]

BLAST of MELO3C024153 vs. NCBI nr
Match: XP_023513641.1 (chaperonin CPN60-2, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 300.4 bits (768), Expect = 1.1e-77
Identity = 165/204 (80.88%), Postives = 175/204 (85.78%), Query Frame = 0


Query: 1   MHRFAPGFGSKARLAKNSARQINSRFNSSRNYASKDIKFGFEARTLMLRGVEELADAVKV 60
           MHRFA G  SKARLA+NS+ QINSR N SRNYA+KDIKFG EAR LMLRGVEELADAVKV
Sbjct: 1   MHRFACGLASKARLARNSSHQINSRLNCSRNYAAKDIKFGVEARALMLRGVEELADAVKV 60

Query: 61  TMGPKGRNVVLEQSFGAPKVTKDGVTVAKCIEFEDKVKNVG---VKQVANATNDVAGDGT 120
           TMGPKGRNVVLEQS+GAPKVTKDGVTVAK IEF+DKVKN+G   VKQVANATNDVAGDGT
Sbjct: 61  TMGPKGRNVVLEQSYGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGT 120

Query: 121 TCATVLTRAIFTEGCKSVASGVNAMDLRLGV---------------QMISTSEEIAQVGI 180
           TCATVLTRAIFTEGCKSVA+GVNAMDLR G+               +MISTSEEIAQVG 
Sbjct: 121 TCATVLTRAIFTEGCKSVAAGVNAMDLRRGITMAVDSVITILKSRARMISTSEEIAQVGT 180

Query: 181 ISANGERKIGELIAKAMEKVGKEG 187
           ISANGER+IGELIAKAMEKVGKEG
Sbjct: 181 ISANGEREIGELIAKAMEKVGKEG 204

[Close]

BLAST of MELO3C024153 vs. ExPASy Swiss-Prot
Match: Q05045 (Chaperonin CPN60-1, mitochondrial OS=Cucurbita maxima OX=3661 GN=CPN60-1 PE=1 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 9.4e-77
Identity = 158/204 (77.45%), Postives = 171/204 (83.82%), Query Frame = 0


Query: 1   MHRFAPGFGSKARLAKNSARQINSRFNSSRNYASKDIKFGFEARTLMLRGVEELADAVKV 60
           MHRFA G  SKARLA+N A QI SR N  RNYA+KD+KFG EAR LML+GVE+LADAVKV
Sbjct: 1   MHRFATGLASKARLARNGANQIASRSNWRRNYAAKDVKFGVEARGLMLKGVEDLADAVKV 60

Query: 61  TMGPKGRNVVLEQSFGAPKVTKDGVTVAKCIEFEDKVKNVG---VKQVANATNDVAGDGT 120
           TMGPKGR VV+EQSFGAPKVTKDGVTVAK IEF+DKVKNVG   VKQVANATNDVAGDGT
Sbjct: 61  TMGPKGRTVVIEQSFGAPKVTKDGVTVAKSIEFKDKVKNVGASLVKQVANATNDVAGDGT 120

Query: 121 TCATVLTRAIFTEGCKSVASGVNAMDLRLGV---------------QMISTSEEIAQVGI 180
           TCAT+LT+AIFTEGCKSVASG+NAMDLR G+               +MISTSEEIAQVG 
Sbjct: 121 TCATILTKAIFTEGCKSVASGMNAMDLRRGISMAVDSVVTNLKSRARMISTSEEIAQVGT 180

Query: 181 ISANGERKIGELIAKAMEKVGKEG 187
           ISANGER+IGELIAKAMEKVGKEG
Sbjct: 181 ISANGEREIGELIAKAMEKVGKEG 204

[Close]

BLAST of MELO3C024153 vs. ExPASy Swiss-Prot
Match: Q05046 (Chaperonin CPN60-2, mitochondrial OS=Cucurbita maxima OX=3661 GN=CPN60-2 PE=1 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 2.1e-76
Identity = 157/204 (76.96%), Postives = 172/204 (84.31%), Query Frame = 0


Query: 1   MHRFAPGFGSKARLAKNSARQINSRFNSSRNYASKDIKFGFEARTLMLRGVEELADAVKV 60
           MHRFA G  SKARLA+  A QI SR + SRNYA+KD+KFG EAR LML+GVE+LADAVKV
Sbjct: 1   MHRFASGLASKARLARKGANQIASRSSWSRNYAAKDVKFGVEARGLMLKGVEDLADAVKV 60

Query: 61  TMGPKGRNVVLEQSFGAPKVTKDGVTVAKCIEFEDKVKNVG---VKQVANATNDVAGDGT 120
           TMGPKGRNVV+EQS+GAPKVTKDGVTVAK IEF+DKVKNVG   VKQVANATNDVAGDGT
Sbjct: 61  TMGPKGRNVVIEQSYGAPKVTKDGVTVAKSIEFKDKVKNVGASLVKQVANATNDVAGDGT 120

Query: 121 TCATVLTRAIFTEGCKSVASGVNAMDLRLGV---------------QMISTSEEIAQVGI 180
           TCAT+LTRAIFTEGCKSVA+G+NAMDLR G+               +MISTSEEIAQVG 
Sbjct: 121 TCATILTRAIFTEGCKSVAAGMNAMDLRRGISMAVDSVVTNLKSRARMISTSEEIAQVGT 180

Query: 181 ISANGERKIGELIAKAMEKVGKEG 187
           ISANGER+IGELIAKAMEKVGKEG
Sbjct: 181 ISANGEREIGELIAKAMEKVGKEG 204

[Close]

BLAST of MELO3C024153 vs. ExPASy Swiss-Prot
Match: P29197 (Chaperonin CPN60, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CPN60 PE=1 SV=2)

HSP 1 Score: 278.9 bits (712), Expect = 4.4e-74
Identity = 154/204 (75.49%), Postives = 173/204 (84.80%), Query Frame = 0


Query: 1   MHRFAPGFGSKARLAKNSARQINSRFNSSRNYASKDIKFGFEARTLMLRGVEELADAVKV 60
           M+RFA    SKAR+A+N ARQ++SR + SRNYA+K+IKFG EAR LML+GVE+LADAVKV
Sbjct: 1   MYRFASNLASKARIAQN-ARQVSSRMSWSRNYAAKEIKFGVEARALMLKGVEDLADAVKV 60

Query: 61  TMGPKGRNVVLEQSFGAPKVTKDGVTVAKCIEFEDKVKNVG---VKQVANATNDVAGDGT 120
           TMGPKGRNVV+EQS+GAPKVTKDGVTVAK IEF+DK+KNVG   VKQVANATNDVAGDGT
Sbjct: 61  TMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKIKNVGASLVKQVANATNDVAGDGT 120

Query: 121 TCATVLTRAIFTEGCKSVASGVNAMDLRLGV---------------QMISTSEEIAQVGI 180
           TCATVLTRAIF EGCKSVA+G+NAMDLR G+               +MISTSEEIAQVG 
Sbjct: 121 TCATVLTRAIFAEGCKSVAAGMNAMDLRRGISMAVDAVVTNLKSKARMISTSEEIAQVGT 180

Query: 181 ISANGERKIGELIAKAMEKVGKEG 187
           ISANGER+IGELIAKAMEKVGKEG
Sbjct: 181 ISANGEREIGELIAKAMEKVGKEG 203

[Close]

BLAST of MELO3C024153 vs. ExPASy Swiss-Prot
Match: P29185 (Chaperonin CPN60-1, mitochondrial OS=Zea mays OX=4577 GN=CPN60I PE=1 SV=2)

HSP 1 Score: 275.4 bits (703), Expect = 4.8e-73
Identity = 156/206 (75.73%), Postives = 168/206 (81.55%), Query Frame = 0


Query: 1   MHRFAPGFGSKARLAKNS--ARQINSRFNSSRNYASKDIKFGFEARTLMLRGVEELADAV 60
           M+R A    SKAR A NS   RQ+ SR   SRNYA+KDIKFG EAR LMLRGVEELADAV
Sbjct: 1   MYRAAASLASKARQAGNSLATRQVGSRLAWSRNYAAKDIKFGVEARALMLRGVEELADAV 60

Query: 61  KVTMGPKGRNVVLEQSFGAPKVTKDGVTVAKCIEFEDKVKNVG---VKQVANATNDVAGD 120
           KVTMGPKGRNVV+EQSFGAPKVTKDGVTVAK IEF+D+VKNVG   VKQVANATND AGD
Sbjct: 61  KVTMGPKGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDTAGD 120

Query: 121 GTTCATVLTRAIFTEGCKSVASGVNAMDLRLGV---------------QMISTSEEIAQV 180
           GTTCATVLT+AIFTEGCKSVA+G+NAMDLR G+               +MISTSEEIAQV
Sbjct: 121 GTTCATVLTKAIFTEGCKSVAAGMNAMDLRRGISMAVDAVVTNLKGMARMISTSEEIAQV 180

Query: 181 GIISANGERKIGELIAKAMEKVGKEG 187
           G ISANGER+IGELIAKAMEKVGKEG
Sbjct: 181 GTISANGEREIGELIAKAMEKVGKEG 206

[Close]

BLAST of MELO3C024153 vs. ExPASy Swiss-Prot
Match: Q8L7B5 (Chaperonin CPN60-like 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g33210 PE=1 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 6.3e-73
Identity = 149/204 (73.04%), Postives = 168/204 (82.35%), Query Frame = 0


Query: 1   MHRFAPGFGSKARLAKNSARQINSRFNSSRNYASKDIKFGFEARTLMLRGVEELADAVKV 60
           M+R      SKAR+A+    QI SR NS+RNYA+KDI+FG EAR LMLRGVE+LADAVKV
Sbjct: 1   MYRLVSNVASKARIARKCTSQIGSRLNSTRNYAAKDIRFGVEARALMLRGVEDLADAVKV 60

Query: 61  TMGPKGRNVVLEQSFGAPKVTKDGVTVAKCIEFEDKVKNVG---VKQVANATNDVAGDGT 120
           TMGPKGRNV++EQS+GAPKVTKDGVTVAK IEF+D++KNVG   VKQVANATNDVAGDGT
Sbjct: 61  TMGPKGRNVIIEQSWGAPKVTKDGVTVAKSIEFKDRIKNVGASLVKQVANATNDVAGDGT 120

Query: 121 TCATVLTRAIFTEGCKSVASGVNAMDLRLGV---------------QMISTSEEIAQVGI 180
           TCATVLTRAIFTEGCKSVA+G+NAMDLR G+               +MISTSEEIAQVG 
Sbjct: 121 TCATVLTRAIFTEGCKSVAAGMNAMDLRRGIKLAVDTVVTNLQSRARMISTSEEIAQVGT 180

Query: 181 ISANGERKIGELIAKAMEKVGKEG 187
           ISANG+R+IGELIAKAME VGKEG
Sbjct: 181 ISANGDREIGELIAKAMETVGKEG 204

[Close]

BLAST of MELO3C024153 vs. ExPASy TrEMBL
Match: A0A0A0K893 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G332900 PE=3 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 6.6e-81
Identity = 172/204 (84.31%), Postives = 177/204 (86.76%), Query Frame = 0


Query: 1   MHRFAPGFGSKARLAKNSARQINSRFNSSRNYASKDIKFGFEARTLMLRGVEELADAVKV 60
           MHRFA G  SKARLA NSARQINSRFNSSRNYA+K IKFG EARTLMLRGVEELADAVKV
Sbjct: 1   MHRFASGLASKARLANNSARQINSRFNSSRNYAAKHIKFGVEARTLMLRGVEELADAVKV 60

Query: 61  TMGPKGRNVVLEQSFGAPKVTKDGVTVAKCIEFEDKVKNVG---VKQVANATNDVAGDGT 120
           TMGPKGRNVVLEQSFGAPKVTKDGVTVAK IEFEDKVKNVG   VKQVANATNDVAGDGT
Sbjct: 61  TMGPKGRNVVLEQSFGAPKVTKDGVTVAKSIEFEDKVKNVGASLVKQVANATNDVAGDGT 120

Query: 121 TCATVLTRAIFTEGCKSVASGVNAMDLRLGV---------------QMISTSEEIAQVGI 180
           TCATVLTRAIFTEGCKSVASGVNAMDLR G+               +MISTSEEIAQVG 
Sbjct: 121 TCATVLTRAIFTEGCKSVASGVNAMDLRRGITMAVDSVITTLKSRARMISTSEEIAQVGT 180

Query: 181 ISANGERKIGELIAKAMEKVGKEG 187
           ISANGER+IGELIAKA+EKVGKEG
Sbjct: 181 ISANGEREIGELIAKALEKVGKEG 204

[Close]

BLAST of MELO3C024153 vs. ExPASy TrEMBL
Match: A0A5A7U5U8 (Chaperonin Cpn60 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G00760 PE=3 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.6e-79
Identity = 163/181 (90.06%), Postives = 165/181 (91.16%), Query Frame = 0


Query: 1   MHRFAPGFGSKARLAKNSARQINSRFNSSRNYASKDIKFGFEARTLMLRGVEELADAVKV 60
           MHRFAPGFGSKARLAKNSARQINSRFNSSRNYASKDIKFGFEARTLMLRGVEELADAVKV
Sbjct: 1   MHRFAPGFGSKARLAKNSARQINSRFNSSRNYASKDIKFGFEARTLMLRGVEELADAVKV 60

Query: 61  TMGPKGRNVVLEQSFGAPKVTKDGVTVAKCIEFEDKVKNVGVKQVANATNDVAGDGTTCA 120
           TMGPKGRNVVLEQSFGAPKVTKDGVTVAKCIEFEDKVKNVGVKQVANATNDVAGDGTTCA
Sbjct: 61  TMGPKGRNVVLEQSFGAPKVTKDGVTVAKCIEFEDKVKNVGVKQVANATNDVAGDGTTCA 120

Query: 121 TVLTRAIFTEGCKSVASGVNAMDLRLGVQMISTSEEIAQVGIISANGERKIGELIAKAME 180
           TVLTRAIFTEGCKSVASGVNAMDLRLG               + +NGERKIGELIAKAME
Sbjct: 121 TVLTRAIFTEGCKSVASGVNAMDLRLG---------------LPSNGERKIGELIAKAME 166

Query: 181 K 182
           K
Sbjct: 181 K 166

[Close]

BLAST of MELO3C024153 vs. ExPASy TrEMBL
Match: A0A6J1H4V2 (chaperonin CPN60-2, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111460590 PE=3 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.3e-78
Identity = 166/204 (81.37%), Postives = 175/204 (85.78%), Query Frame = 0


Query: 1   MHRFAPGFGSKARLAKNSARQINSRFNSSRNYASKDIKFGFEARTLMLRGVEELADAVKV 60
           MHRFA G  SKARLA+NSA QINSR N SRNYA+KDIKFG EAR LMLRGVEELADAVKV
Sbjct: 1   MHRFACGLASKARLARNSAHQINSRLNCSRNYAAKDIKFGVEARALMLRGVEELADAVKV 60

Query: 61  TMGPKGRNVVLEQSFGAPKVTKDGVTVAKCIEFEDKVKNVG---VKQVANATNDVAGDGT 120
           TMGPKGRNVVLEQS+GAPKVTKDGVTVAK IEF+DKVKN+G   VKQVANATNDVAGDGT
Sbjct: 61  TMGPKGRNVVLEQSYGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGT 120

Query: 121 TCATVLTRAIFTEGCKSVASGVNAMDLRLGV---------------QMISTSEEIAQVGI 180
           TCATVLTRAIFTEGCKSVA+GVNAMDLR G+               +MISTSEEIAQVG 
Sbjct: 121 TCATVLTRAIFTEGCKSVAAGVNAMDLRRGITMAVDSVITTLKSRARMISTSEEIAQVGT 180

Query: 181 ISANGERKIGELIAKAMEKVGKEG 187
           ISANGER+IGELIAKAMEKVGKEG
Sbjct: 181 ISANGEREIGELIAKAMEKVGKEG 204

[Close]

BLAST of MELO3C024153 vs. ExPASy TrEMBL
Match: A0A6J1L0Z8 (chaperonin CPN60-2, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111498113 PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.5e-77
Identity = 165/204 (80.88%), Postives = 174/204 (85.29%), Query Frame = 0


Query: 1   MHRFAPGFGSKARLAKNSARQINSRFNSSRNYASKDIKFGFEARTLMLRGVEELADAVKV 60
           MHRFA G  SKARLA+NSA  INSR N SRNYA+KDIKFG EAR LMLRGVEELADAVKV
Sbjct: 1   MHRFACGLASKARLARNSAHLINSRLNCSRNYAAKDIKFGVEARALMLRGVEELADAVKV 60

Query: 61  TMGPKGRNVVLEQSFGAPKVTKDGVTVAKCIEFEDKVKNVG---VKQVANATNDVAGDGT 120
           TMGPKGRNVVLEQS+GAPKVTKDGVTVAK IEF+DKVKN+G   VKQVANATNDVAGDGT
Sbjct: 61  TMGPKGRNVVLEQSYGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGT 120

Query: 121 TCATVLTRAIFTEGCKSVASGVNAMDLRLGV---------------QMISTSEEIAQVGI 180
           TCATVLTRAIFTEGCKSVA+GVNAMDLR G+               +MISTSEEIAQVG 
Sbjct: 121 TCATVLTRAIFTEGCKSVAAGVNAMDLRRGITMAVDSVITTLKSRARMISTSEEIAQVGT 180

Query: 181 ISANGERKIGELIAKAMEKVGKEG 187
           ISANGER+IGELIAKAMEKVGKEG
Sbjct: 181 ISANGEREIGELIAKAMEKVGKEG 204

[Close]

BLAST of MELO3C024153 vs. ExPASy TrEMBL
Match: A0A6J1DCE4 (chaperonin CPN60-2, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111018791 PE=3 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.0e-77
Identity = 165/204 (80.88%), Postives = 174/204 (85.29%), Query Frame = 0


Query: 1   MHRFAPGFGSKARLAKNSARQINSRFNSSRNYASKDIKFGFEARTLMLRGVEELADAVKV 60
           MHRFA G  SKARLAKN+A QINSR N SRNYA+KDIKFG EAR  MLRGVEELADAVKV
Sbjct: 1   MHRFACGLASKARLAKNTAHQINSRLNWSRNYAAKDIKFGVEARASMLRGVEELADAVKV 60

Query: 61  TMGPKGRNVVLEQSFGAPKVTKDGVTVAKCIEFEDKVKNVG---VKQVANATNDVAGDGT 120
           TMGPKGRNVVLEQS+GAPKVTKDGVTVAK IEF+DKVKN+G   VKQVANATNDVAGDGT
Sbjct: 61  TMGPKGRNVVLEQSYGAPKVTKDGVTVAKSIEFKDKVKNIGAGLVKQVANATNDVAGDGT 120

Query: 121 TCATVLTRAIFTEGCKSVASGVNAMDLRLGV---------------QMISTSEEIAQVGI 180
           TCATVLTRAIFTEGCKSVA+GVNAMDLR G+               +MISTSEEIAQVG 
Sbjct: 121 TCATVLTRAIFTEGCKSVAAGVNAMDLRRGITMAIDSVVSTLKSRARMISTSEEIAQVGT 180

Query: 181 ISANGERKIGELIAKAMEKVGKEG 187
           ISANGER+IGELIAKAMEKVGKEG
Sbjct: 181 ISANGEREIGELIAKAMEKVGKEG 204

[Close]

BLAST of MELO3C024153 vs. TAIR 10
Match: AT3G23990.1 (heat shock protein 60 )

HSP 1 Score: 278.9 bits (712), Expect = 3.1e-75
Identity = 154/204 (75.49%), Postives = 173/204 (84.80%), Query Frame = 0


Query: 1   MHRFAPGFGSKARLAKNSARQINSRFNSSRNYASKDIKFGFEARTLMLRGVEELADAVKV 60
           M+RFA    SKAR+A+N ARQ++SR + SRNYA+K+IKFG EAR LML+GVE+LADAVKV
Sbjct: 1   MYRFASNLASKARIAQN-ARQVSSRMSWSRNYAAKEIKFGVEARALMLKGVEDLADAVKV 60

Query: 61  TMGPKGRNVVLEQSFGAPKVTKDGVTVAKCIEFEDKVKNVG---VKQVANATNDVAGDGT 120
           TMGPKGRNVV+EQS+GAPKVTKDGVTVAK IEF+DK+KNVG   VKQVANATNDVAGDGT
Sbjct: 61  TMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKIKNVGASLVKQVANATNDVAGDGT 120

Query: 121 TCATVLTRAIFTEGCKSVASGVNAMDLRLGV---------------QMISTSEEIAQVGI 180
           TCATVLTRAIF EGCKSVA+G+NAMDLR G+               +MISTSEEIAQVG 
Sbjct: 121 TCATVLTRAIFAEGCKSVAAGMNAMDLRRGISMAVDAVVTNLKSKARMISTSEEIAQVGT 180

Query: 181 ISANGERKIGELIAKAMEKVGKEG 187
           ISANGER+IGELIAKAMEKVGKEG
Sbjct: 181 ISANGEREIGELIAKAMEKVGKEG 203

[Close]

BLAST of MELO3C024153 vs. TAIR 10
Match: AT2G33210.1 (heat shock protein 60-2 )

HSP 1 Score: 275.0 bits (702), Expect = 4.5e-74
Identity = 149/204 (73.04%), Postives = 168/204 (82.35%), Query Frame = 0


Query: 1   MHRFAPGFGSKARLAKNSARQINSRFNSSRNYASKDIKFGFEARTLMLRGVEELADAVKV 60
           M+R      SKAR+A+    QI SR NS+RNYA+KDI+FG EAR LMLRGVE+LADAVKV
Sbjct: 1   MYRLVSNVASKARIARKCTSQIGSRLNSTRNYAAKDIRFGVEARALMLRGVEDLADAVKV 60

Query: 61  TMGPKGRNVVLEQSFGAPKVTKDGVTVAKCIEFEDKVKNVG---VKQVANATNDVAGDGT 120
           TMGPKGRNV++EQS+GAPKVTKDGVTVAK IEF+D++KNVG   VKQVANATNDVAGDGT
Sbjct: 61  TMGPKGRNVIIEQSWGAPKVTKDGVTVAKSIEFKDRIKNVGASLVKQVANATNDVAGDGT 120

Query: 121 TCATVLTRAIFTEGCKSVASGVNAMDLRLGV---------------QMISTSEEIAQVGI 180
           TCATVLTRAIFTEGCKSVA+G+NAMDLR G+               +MISTSEEIAQVG 
Sbjct: 121 TCATVLTRAIFTEGCKSVAAGMNAMDLRRGIKLAVDTVVTNLQSRARMISTSEEIAQVGT 180

Query: 181 ISANGERKIGELIAKAMEKVGKEG 187
           ISANG+R+IGELIAKAME VGKEG
Sbjct: 181 ISANGDREIGELIAKAMETVGKEG 204

[Close]

BLAST of MELO3C024153 vs. TAIR 10
Match: AT2G33210.2 (heat shock protein 60-2 )

HSP 1 Score: 275.0 bits (702), Expect = 4.5e-74
Identity = 149/204 (73.04%), Postives = 168/204 (82.35%), Query Frame = 0


Query: 1   MHRFAPGFGSKARLAKNSARQINSRFNSSRNYASKDIKFGFEARTLMLRGVEELADAVKV 60
           M+R      SKAR+A+    QI SR NS+RNYA+KDI+FG EAR LMLRGVE+LADAVKV
Sbjct: 1   MYRLVSNVASKARIARKCTSQIGSRLNSTRNYAAKDIRFGVEARALMLRGVEDLADAVKV 60

Query: 61  TMGPKGRNVVLEQSFGAPKVTKDGVTVAKCIEFEDKVKNVG---VKQVANATNDVAGDGT 120
           TMGPKGRNV++EQS+GAPKVTKDGVTVAK IEF+D++KNVG   VKQVANATNDVAGDGT
Sbjct: 61  TMGPKGRNVIIEQSWGAPKVTKDGVTVAKSIEFKDRIKNVGASLVKQVANATNDVAGDGT 120

Query: 121 TCATVLTRAIFTEGCKSVASGVNAMDLRLGV---------------QMISTSEEIAQVGI 180
           TCATVLTRAIFTEGCKSVA+G+NAMDLR G+               +MISTSEEIAQVG 
Sbjct: 121 TCATVLTRAIFTEGCKSVAAGMNAMDLRRGIKLAVDTVVTNLQSRARMISTSEEIAQVGT 180

Query: 181 ISANGERKIGELIAKAMEKVGKEG 187
           ISANG+R+IGELIAKAME VGKEG
Sbjct: 181 ISANGDREIGELIAKAMETVGKEG 204

[Close]

BLAST of MELO3C024153 vs. TAIR 10
Match: AT3G13860.1 (heat shock protein 60-3A )

HSP 1 Score: 225.7 bits (574), Expect = 3.1e-59
Identity = 123/190 (64.74%), Postives = 144/190 (75.79%), Query Frame = 0


Query: 15  AKNSARQINSRFNSSRNYASKDIKFGFEARTLMLRGVEELADAVKVTMGPKGRNVVLEQS 74
           +  S + ++ R  SSRNYA+KDI FG  AR  ML+GV E+A+AVKVTMGPKGRNV++E S
Sbjct: 14  SSTSRKLVSGRIISSRNYAAKDISFGIGARAAMLQGVSEVAEAVKVTMGPKGRNVIIESS 73

Query: 75  FGAPKVTKDGVTVAKCIEFEDKVKNVG---VKQVANATNDVAGDGTTCATVLTRAIFTEG 134
           +G PK+TKDGVTVAK I F+ K KN+G   VKQVA+ATN VAGDGTTCATVLT+AI  EG
Sbjct: 74  YGGPKITKDGVTVAKSISFQAKAKNIGAELVKQVASATNKVAGDGTTCATVLTQAILIEG 133

Query: 135 CKSVASGVNAMDLRLGVQ---------------MISTSEEIAQVGIISANGERKIGELIA 187
           CKSVA+GVN MDLR+G+                MIST EEI QV  ISANGER+IGELIA
Sbjct: 134 CKSVAAGVNVMDLRVGINMAIAAVVSDLKSRAVMISTPEEITQVATISANGEREIGELIA 193

[Close]

BLAST of MELO3C024153 vs. TAIR 10
Match: AT3G13470.1 (TCP-1/cpn60 chaperonin family protein )

HSP 1 Score: 129.4 bits (324), Expect = 3.1e-30
Identity = 72/173 (41.62%), Postives = 107/173 (61.85%), Query Frame = 0


Query: 33  ASKDIKFGFEARTL--MLRGVEELADAVKVTMGPKGRNVVLEQSFGAPKVTKDGVTVAKC 92
           A+K++ F  +  T+  +  GV +LAD V VT+GPKGRNVVLE  +G+P++  DGVTVA+ 
Sbjct: 51  AAKELHFNKDGTTIRKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVARE 110

Query: 93  IEFEDKVKNVG---VKQVANATNDVAGDGTTCATVLTRAIFTEGCKSVASGVNAMDLRLG 152
           +E ED V+N+G   V+Q A  TND+AGDGTT + VL +    EG K VA+G N + +  G
Sbjct: 111 VELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRG 170

Query: 153 VQMISTS--------------EEIAQVGIISANGERKIGELIAKAMEKVGKEG 187
           ++  + +               E+A V  +SA    ++G +IA+AM KVG++G
Sbjct: 171 IEKTAKALVNELKLMSKEVEDSELADVAAVSAGNNHEVGSMIAEAMSKVGRKG 223

The following BLAST results are available for this feature:

BLAST of MELO3C024153 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139642.1	1.4e-80	84.31	chaperonin CPN60-2, mitochondrial [Cucumis sativus] >KGN44557.1 hypothetical pro...	[more]
XP_038898854.1	3.3e-79	81.86	LOW QUALITY PROTEIN: chaperonin CPN60-2, mitochondrial-like [Benincasa hispida]	[more]
KAA0050614.1	3.3e-79	90.06	Chaperonin Cpn60 [Cucumis melo var. makuwa]	[more]
XP_022959552.1	4.8e-78	81.37	chaperonin CPN60-2, mitochondrial-like [Cucurbita moschata]	[more]
XP_023513641.1	1.1e-77	80.88	chaperonin CPN60-2, mitochondrial-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C024153 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q05045	9.4e-77	77.45	Chaperonin CPN60-1, mitochondrial OS=Cucurbita maxima OX=3661 GN=CPN60-1 PE=1 SV...	[more]
Q05046	2.1e-76	76.96	Chaperonin CPN60-2, mitochondrial OS=Cucurbita maxima OX=3661 GN=CPN60-2 PE=1 SV...	[more]
P29197	4.4e-74	75.49	Chaperonin CPN60, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CPN60 PE=1 SV...	[more]
P29185	4.8e-73	75.73	Chaperonin CPN60-1, mitochondrial OS=Zea mays OX=4577 GN=CPN60I PE=1 SV=2	[more]
Q8L7B5	6.3e-73	73.04	Chaperonin CPN60-like 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g33...	[more]

BLAST of MELO3C024153 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K893	6.6e-81	84.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G332900 PE=3 SV=1	[more]
A0A5A7U5U8	1.6e-79	90.06	Chaperonin Cpn60 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G007...	[more]
A0A6J1H4V2	2.3e-78	81.37	chaperonin CPN60-2, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1L0Z8	1.5e-77	80.88	chaperonin CPN60-2, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC1114981...	[more]
A0A6J1DCE4	2.0e-77	80.88	chaperonin CPN60-2, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of MELO3C024153 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23990.1	3.1e-75	75.49	heat shock protein 60	[more]
AT2G33210.1	4.5e-74	73.04	heat shock protein 60-2	[more]
AT2G33210.2	4.5e-74	73.04	heat shock protein 60-2	[more]
AT3G13860.1	3.1e-59	64.74	heat shock protein 60-3A	[more]
AT3G13470.1	3.1e-30	41.62	TCP-1/cpn60 chaperonin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001844	Chaperonin Cpn60	PRINTS	PR00298	CHAPERONIN60	coord: 58..84 score: 71.65 coord: 111..138 score: 63.18
IPR027413	GroEL-like equatorial domain superfamily	GENE3D	1.10.560.10		coord: 37..150 e-value: 2.0E-57 score: 196.8
IPR027413	GroEL-like equatorial domain superfamily	SUPERFAMILY	48592	GroEL equatorial domain-like	coord: 34..186
IPR002423	Chaperonin Cpn60/TCP-1 family	PFAM	PF00118	Cpn60_TCP1	coord: 54..149 e-value: 7.3E-22 score: 77.7
IPR027410	TCP-1-like chaperonin intermediate domain superfamily	GENE3D	3.30.260.10		coord: 151..187 e-value: 2.0E-57 score: 196.8
None	No IPR available	PANTHER	PTHR45633	60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL	coord: 12..186
None	No IPR available	PANTHER	PTHR45633:SF40	CHAPERONIN CPN60-2, MITOCHONDRIAL-LIKE	coord: 12..186

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C024153.1	MELO3C024153.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042026	protein refolding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity