MELO3C024134 (gene) Melon (DHL92) v4

Overview


Name	MELO3C024134
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Serine-rich adhesin for platelets
Location	chr01: 5436500 .. 5436763 (+)
RNA-Seq Expression	MELO3C024134
Synteny	MELO3C024134

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCAGACATCGTCATCTTCGTCATCAGCGTCATCGTCATACTGGGTATCATCATCCTCCGACGAAGAAGGGAGATTCCAGCAGGCAGCGACGTACGGTCAGGCCGGGCGAAGCAAGAACAAAGGGTGGGCATTTGCTAGTCCGATGAGAGCTTTCACGAAGCCATCGTCTTCATCATCAGAAGGGAAAAGAGAATCATCGGAGAAAAATTTGACTCCAAATTTGGACGCCATTCCTTCATTGTTGACCGTAAGAATCTGA

mRNA sequence

ATGATTCAGACATCGTCATCTTCGTCATCAGCGTCATCGTCATACTGGGTATCATCATCCTCCGACGAAGAAGGGAGATTCCAGCAGGCAGCGACGTACGGTCAGGCCGGGCGAAGCAAGAACAAAGGGTGGGCATTTGCTAGTCCGATGAGAGCTTTCACGAAGCCATCGTCTTCATCATCAGAAGGGAAAAGAGAATCATCGGAGAAAAATTTGACTCCAAATTTGGACGCCATTCCTTCATTGTTGACCGTAAGAATCTGA

Coding sequence (CDS)

ATGATTCAGACATCGTCATCTTCGTCATCAGCGTCATCGTCATACTGGGTATCATCATCCTCCGACGAAGAAGGGAGATTCCAGCAGGCAGCGACGTACGGTCAGGCCGGGCGAAGCAAGAACAAAGGGTGGGCATTTGCTAGTCCGATGAGAGCTTTCACGAAGCCATCGTCTTCATCATCAGAAGGGAAAAGAGAATCATCGGAGAAAAATTTGACTCCAAATTTGGACGCCATTCCTTCATTGTTGACCGTAAGAATCTGA

Protein sequence

MIQTSSSSSSASSSYWVSSSSDEEGRFQQAATYGQAGRSKNKGWAFASPMRAFTKPSSSSSEGKRESSEKNLTPNLDAIPSLLTVRI

Homology

[Close]

BLAST of MELO3C024134 vs. NCBI nr
Match: TYK07772.1 (putative serine-rich protein-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 149.1 bits (375), Expect = 1.8e-32
Identity = 83/84 (98.81%), Postives = 83/84 (98.81%), Query Frame = 0


Query: 1  MIQTSSSSSSASSSYWVSSSSDEEGRFQQAATYGQAGRSKNKGWAFASPMRAFTKPSSSS 60
          MIQTSSSSSSASSSYWVSSSSDEEGRFQQAATYGQAGRSKNKGWAFASPMRAFTKPSSSS
Sbjct: 1  MIQTSSSSSSASSSYWVSSSSDEEGRFQQAATYGQAGRSKNKGWAFASPMRAFTKPSSSS 60

Query: 61 SEGKRESSEKNLTPNLDAIPSLLT 85
          SEGKRESSEKN TPNLDAIPSLLT
Sbjct: 61 SEGKRESSEKNSTPNLDAIPSLLT 84

[Close]

BLAST of MELO3C024134 vs. NCBI nr
Match: XP_008438897.1 (PREDICTED: uncharacterized protein DDB_G0271670 [Cucumis melo] >KAA0049506.1 serine-rich adhesin for platelets [Cucumis melo var. makuwa] >TYK16186.1 serine-rich adhesin for platelets [Cucumis melo var. makuwa])

HSP 1 Score: 147.5 bits (371), Expect = 5.3e-32
Identity = 83/86 (96.51%), Postives = 83/86 (96.51%), Query Frame = 0


Query: 2   IQTSSSSSSASSSYWVSSSSDEEGRFQQAATYGQAGRSKNKGWAFASPMRAFTKPSSSSS 61
           IQTSSSSSSASSSYWVSSSS EEGRFQQAATYGQAGRSKNKGWAFASPMRAFTKPSSSSS
Sbjct: 300 IQTSSSSSSASSSYWVSSSSGEEGRFQQAATYGQAGRSKNKGWAFASPMRAFTKPSSSSS 359

Query: 62  EGKRESSEKNLTPNLDAIPSLLTVRI 88
           EGKRESSEKN TPNLDAIPSLL VRI
Sbjct: 360 EGKRESSEKNSTPNLDAIPSLLAVRI 385

[Close]

BLAST of MELO3C024134 vs. NCBI nr
Match: XP_004134219.3 (uncharacterized protein DDB_G0271670 [Cucumis sativus] >KAE8650397.1 hypothetical protein Csa_009537 [Cucumis sativus])

HSP 1 Score: 143.7 bits (361), Expect = 7.6e-31
Identity = 83/87 (95.40%), Postives = 83/87 (95.40%), Query Frame = 0


Query: 1   MIQTSSSSSSASSSYWVSSSSDEEGRFQQAATYGQAGRSKNKGWAFASPMRAFTKPSSSS 60
           MIQTSSSSSSASSSYWVSSSS EEGRFQQ ATYGQAGRSKNKGWAFASPMRAFTKPSSSS
Sbjct: 300 MIQTSSSSSSASSSYWVSSSSGEEGRFQQ-ATYGQAGRSKNKGWAFASPMRAFTKPSSSS 359

Query: 61  SEGKRESSEKNLTPNLDAIPSLLTVRI 88
           SEGKRESSEKN TPNLDAIPSLL VRI
Sbjct: 360 SEGKRESSEKNSTPNLDAIPSLLAVRI 385

[Close]

BLAST of MELO3C024134 vs. NCBI nr
Match: KAG7018602.1 (hypothetical protein SDJN02_20472, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 120.9 bits (302), Expect = 5.3e-24
Identity = 74/87 (85.06%), Postives = 76/87 (87.36%), Query Frame = 0


Query: 1   MIQTSSSSSSASSSYWVSSSSDEEGRFQQAATYGQAGRSKNKGWAFASPMRAFTKPSSSS 60
           M QTSSSSSSASSSYWVSSSS E+GRF   A YGQ GRSKN+GWAFASPMRAF KP SSS
Sbjct: 280 MNQTSSSSSSASSSYWVSSSSGEDGRF-PPAPYGQ-GRSKNRGWAFASPMRAFGKPPSSS 339

Query: 61  SEGKRESSEKNLTPNLDAIPSLLTVRI 88
           SEGKRESSEKN TPNLDAIPSLL VRI
Sbjct: 340 SEGKRESSEKNSTPNLDAIPSLLAVRI 364

[Close]

BLAST of MELO3C024134 vs. NCBI nr
Match: KAG6582206.1 (hypothetical protein SDJN03_22208, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 120.9 bits (302), Expect = 5.3e-24
Identity = 74/87 (85.06%), Postives = 76/87 (87.36%), Query Frame = 0


Query: 1   MIQTSSSSSSASSSYWVSSSSDEEGRFQQAATYGQAGRSKNKGWAFASPMRAFTKPSSSS 60
           M QTSSSSSSASSSYWVSSSS E+GRF   A YGQ GRSKN+GWAFASPMRAF KP SSS
Sbjct: 281 MNQTSSSSSSASSSYWVSSSSGEDGRF-PPAPYGQ-GRSKNRGWAFASPMRAFGKPPSSS 340

Query: 61  SEGKRESSEKNLTPNLDAIPSLLTVRI 88
           SEGKRESSEKN TPNLDAIPSLL VRI
Sbjct: 341 SEGKRESSEKNSTPNLDAIPSLLAVRI 365

[Close]

BLAST of MELO3C024134 vs. ExPASy TrEMBL
Match: A0A5D3C909 (Putative serine-rich protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00480 PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 8.8e-33
Identity = 83/84 (98.81%), Postives = 83/84 (98.81%), Query Frame = 0


Query: 1  MIQTSSSSSSASSSYWVSSSSDEEGRFQQAATYGQAGRSKNKGWAFASPMRAFTKPSSSS 60
          MIQTSSSSSSASSSYWVSSSSDEEGRFQQAATYGQAGRSKNKGWAFASPMRAFTKPSSSS
Sbjct: 1  MIQTSSSSSSASSSYWVSSSSDEEGRFQQAATYGQAGRSKNKGWAFASPMRAFTKPSSSS 60

Query: 61 SEGKRESSEKNLTPNLDAIPSLLT 85
          SEGKRESSEKN TPNLDAIPSLLT
Sbjct: 61 SEGKRESSEKNSTPNLDAIPSLLT 84

[Close]

BLAST of MELO3C024134 vs. ExPASy TrEMBL
Match: A0A5A7U5P3 (Serine-rich adhesin for platelets OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001140 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.6e-32
Identity = 83/86 (96.51%), Postives = 83/86 (96.51%), Query Frame = 0


Query: 2   IQTSSSSSSASSSYWVSSSSDEEGRFQQAATYGQAGRSKNKGWAFASPMRAFTKPSSSSS 61
           IQTSSSSSSASSSYWVSSSS EEGRFQQAATYGQAGRSKNKGWAFASPMRAFTKPSSSSS
Sbjct: 300 IQTSSSSSSASSSYWVSSSSGEEGRFQQAATYGQAGRSKNKGWAFASPMRAFTKPSSSSS 359

Query: 62  EGKRESSEKNLTPNLDAIPSLLTVRI 88
           EGKRESSEKN TPNLDAIPSLL VRI
Sbjct: 360 EGKRESSEKNSTPNLDAIPSLLAVRI 385

[Close]

BLAST of MELO3C024134 vs. ExPASy TrEMBL
Match: A0A1S3AY44 (uncharacterized protein DDB_G0271670 OS=Cucumis melo OX=3656 GN=LOC103483856 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.6e-32
Identity = 83/86 (96.51%), Postives = 83/86 (96.51%), Query Frame = 0


Query: 2   IQTSSSSSSASSSYWVSSSSDEEGRFQQAATYGQAGRSKNKGWAFASPMRAFTKPSSSSS 61
           IQTSSSSSSASSSYWVSSSS EEGRFQQAATYGQAGRSKNKGWAFASPMRAFTKPSSSSS
Sbjct: 300 IQTSSSSSSASSSYWVSSSSGEEGRFQQAATYGQAGRSKNKGWAFASPMRAFTKPSSSSS 359

Query: 62  EGKRESSEKNLTPNLDAIPSLLTVRI 88
           EGKRESSEKN TPNLDAIPSLL VRI
Sbjct: 360 EGKRESSEKNSTPNLDAIPSLLAVRI 385

[Close]

BLAST of MELO3C024134 vs. ExPASy TrEMBL
Match: A0A0A0L7Y1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G159440 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.7e-31
Identity = 83/87 (95.40%), Postives = 83/87 (95.40%), Query Frame = 0


Query: 1   MIQTSSSSSSASSSYWVSSSSDEEGRFQQAATYGQAGRSKNKGWAFASPMRAFTKPSSSS 60
           MIQTSSSSSSASSSYWVSSSS EEGRFQQ ATYGQAGRSKNKGWAFASPMRAFTKPSSSS
Sbjct: 300 MIQTSSSSSSASSSYWVSSSSGEEGRFQQ-ATYGQAGRSKNKGWAFASPMRAFTKPSSSS 359

Query: 61  SEGKRESSEKNLTPNLDAIPSLLTVRI 88
           SEGKRESSEKN TPNLDAIPSLL VRI
Sbjct: 360 SEGKRESSEKNSTPNLDAIPSLLAVRI 385

[Close]

BLAST of MELO3C024134 vs. ExPASy TrEMBL
Match: A0A6J1GU50 (uncharacterized protein LOC111457510 OS=Cucurbita moschata OX=3662 GN=LOC111457510 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 5.7e-24
Identity = 73/87 (83.91%), Postives = 76/87 (87.36%), Query Frame = 0


Query: 1   MIQTSSSSSSASSSYWVSSSSDEEGRFQQAATYGQAGRSKNKGWAFASPMRAFTKPSSSS 60
           M QTSSSSSSASSSYWVSSSS ++GRF   A YGQ GRSKN+GWAFASPMRAF KP SSS
Sbjct: 278 MNQTSSSSSSASSSYWVSSSSGDDGRF-PPAPYGQ-GRSKNRGWAFASPMRAFGKPPSSS 337

Query: 61  SEGKRESSEKNLTPNLDAIPSLLTVRI 88
           SEGKRESSEKN TPNLDAIPSLL VRI
Sbjct: 338 SEGKRESSEKNSTPNLDAIPSLLAVRI 362

[Close]

BLAST of MELO3C024134 vs. TAIR 10
Match: AT5G49100.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G06868.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 1.7e-12
Identity = 46/89 (51.69%), Postives = 59/89 (66.29%), Query Frame = 0


Query: 1   MIQTSSSSSSASSSYWVSSSSDEEGRFQQAATYGQAGRSKNKGWAFASPMRAFTKPSSSS 60
           MI TSSSSSS+SSS+  SSS++          +G  GR+++ GW+FASPMRAFT  S S 
Sbjct: 307 MIMTSSSSSSSSSSWVSSSSAEHHHHHNHNMGHGGGGRNRSWGWSFASPMRAFTSSSYSG 366

Query: 61  SEGKR---ESSEKNLTPNLDAIPSLLTVR 87
             G+     ++ KN TPNL AIPSLL+VR
Sbjct: 367 KRGRTISDSTTSKNTTPNLGAIPSLLSVR 395

The following BLAST results are available for this feature:

BLAST of MELO3C024134 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK07772.1	1.8e-32	98.81	putative serine-rich protein-like protein [Cucumis melo var. makuwa]	[more]
XP_008438897.1	5.3e-32	96.51	PREDICTED: uncharacterized protein DDB_G0271670 [Cucumis melo] >KAA0049506.1 ser...	[more]
XP_004134219.3	7.6e-31	95.40	uncharacterized protein DDB_G0271670 [Cucumis sativus] >KAE8650397.1 hypothetica...	[more]
KAG7018602.1	5.3e-24	85.06	hypothetical protein SDJN02_20472, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6582206.1	5.3e-24	85.06	hypothetical protein SDJN03_22208, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MELO3C024134 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C024134 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C909	8.8e-33	98.81	Putative serine-rich protein-like protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A5A7U5P3	2.6e-32	96.51	Serine-rich adhesin for platelets OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3AY44	2.6e-32	96.51	uncharacterized protein DDB_G0271670 OS=Cucumis melo OX=3656 GN=LOC103483856 PE=...	[more]
A0A0A0L7Y1	3.7e-31	95.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G159440 PE=4 SV=1	[more]
A0A6J1GU50	5.7e-24	83.91	uncharacterized protein LOC111457510 OS=Cucurbita moschata OX=3662 GN=LOC1114575...	[more]

BLAST of MELO3C024134 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49100.1	1.7e-12	51.69	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..87
None	No IPR available	PANTHER	PTHR34460:SF2	VITELLOGENIN-LIKE PROTEIN	coord: 3..86
None	No IPR available	PANTHER	PTHR34460	VITELLOGENIN-LIKE PROTEIN	coord: 3..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C024134.1	MELO3C024134.1	mRNA