MELO3C023909 (gene) Melon (DHL92) v4

Overview


Name	MELO3C023909
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Taxadiene 5-alpha hydroxylase-like
Location	chr10: 7335020 .. 7335364 (+)
RNA-Seq Expression	MELO3C023909
Synteny	MELO3C023909

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTTGAGCATATCCCCAGCCCTGACTCCCCTCTAATGACACCAATCCAAATCTCCCCAACTCAATCTGAGATCATTAGAGACAACTTGGTCACTCTGGTGGATAGTGAGGAAGAAGAAGGGAAATCAGATAAATGGATTGGCAAGAAGAAAATCAGTGAAAAGCTCTTTAAAAAGCAGCTCATTACTTGGCTAAAGGACAACAACCTCAAACTCGCTCCAGCTTTTGACAACATTGTAAGCACCTTCACAACCAATATGGGAACTGAAAACAATATTGAAATAGGCTATAAGCCTTTGGGATCGAATAGTTCACCACGAAAATGCATTCTTGGAATGTAA

mRNA sequence

ATGGAAGTTGAGCATATCCCCAGCCCTGACTCCCCTCTAATGACACCAATCCAAATCTCCCCAACTCAATCTGAGATCATTAGAGACAACTTGGTCACTCTGGTGGATAGTGAGGAAGAAGAAGGGAAATCAGATAAATGGATTGGCAAGAAGAAAATCAGTGAAAAGCTCTTTAAAAAGCAGCTCATTACTTGGCTAAAGGACAACAACCTCAAACTCGCTCCAGCTTTTGACAACATTGTAAGCACCTTCACAACCAATATGGGAACTGAAAACAATATTGAAATAGGCTATAAGCCTTTGGGATCGAATAGTTCACCACGAAAATGCATTCTTGGAATGTAA

Coding sequence (CDS)

ATGGAAGTTGAGCATATCCCCAGCCCTGACTCCCCTCTAATGACACCAATCCAAATCTCCCCAACTCAATCTGAGATCATTAGAGACAACTTGGTCACTCTGGTGGATAGTGAGGAAGAAGAAGGGAAATCAGATAAATGGATTGGCAAGAAGAAAATCAGTGAAAAGCTCTTTAAAAAGCAGCTCATTACTTGGCTAAAGGACAACAACCTCAAACTCGCTCCAGCTTTTGACAACATTGTAAGCACCTTCACAACCAATATGGGAACTGAAAACAATATTGAAATAGGCTATAAGCCTTTGGGATCGAATAGTTCACCACGAAAATGCATTCTTGGAATGTAA

Protein sequence

MEVEHIPSPDSPLMTPIQISPTQSEIIRDNLVTLVDSEEEEGKSDKWIGKKKISEKLFKKQLITWLKDNNLKLAPAFDNIVSTFTTNMGTENNIEIGYKPLGSNSSPRKCILGM

Homology

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BLAST of MELO3C023909 vs. NCBI nr
Match: TYJ97748.1 (taxadiene 5-alpha hydroxylase-like [Cucumis melo var. makuwa])

HSP 1 Score: 160.6 bits (405), Expect = 7.9e-36
Identity = 80/107 (74.77%), Postives = 93/107 (86.92%), Query Frame = 0


Query: 1   MEVEHIPSPDSPLMTPIQISPTQSEIIRDNLVTLVDSEEEEGKSDKWIGKKKISEKLFKK 60
           ME+EHI SP+SP+MTPIQ+SPTQSEIIRD+LVTLVDSEEEE +++ W  K++ISE+LFKK
Sbjct: 374 MEMEHISSPNSPIMTPIQVSPTQSEIIRDSLVTLVDSEEEEEQNEGWTRKREISEELFKK 433

Query: 61  QLITWLKDNNLKLAPAFDNIVSTFTTNMGTENNIEIGYKPLGSNSSP 108
           QLI WLKDNNLKLA AFDN  ST   NM  ENN+EIGY+PLGSNSSP
Sbjct: 434 QLINWLKDNNLKLASAFDNFASTPKINMENENNVEIGYEPLGSNSSP 480

[Close]

BLAST of MELO3C023909 vs. NCBI nr
Match: TYK07346.1 (hypothetical protein E5676_scaffold202G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 142.1 bits (357), Expect = 2.9e-30
Identity = 73/106 (68.87%), Postives = 86/106 (81.13%), Query Frame = 0


Query: 1   MEVEHIPSPDSPLMTPIQISPTQSEIIRDNLVTLVDSEEEEGKSDKWIGKKKISEKLFKK 60
           MEVEHI SPDSP+MTPIQ SP+QSEIIR++LV+LVD EEEE +   W GKK+IS+ LFKK
Sbjct: 219 MEVEHISSPDSPVMTPIQTSPSQSEIIRNSLVSLVDREEEEEQIKGWTGKKEISKDLFKK 278

Query: 61  QLITWLKDNNLKLAPAFDNIVSTFTTNMGTENNIEIGYKPLGSNSS 107
           Q I WLKDNNLKLAPAF+N  S+   NM  ENN+EIGY+P  SN+S
Sbjct: 279 QPINWLKDNNLKLAPAFENNASSSKINMENENNVEIGYEPSRSNNS 324

[Close]

BLAST of MELO3C023909 vs. NCBI nr
Match: KAA0062230.1 (hypothetical protein E6C27_scaffold321G00310 [Cucumis melo var. makuwa])

HSP 1 Score: 124.0 bits (310), Expect = 8.2e-25
Identity = 59/83 (71.08%), Postives = 75/83 (90.36%), Query Frame = 0


Query: 1   MEVEHIPSPDSPLMTPIQISPTQSEIIRDNLVTLVDSEEEEGKSDKWIGKKKISEKLFKK 60
           +EVEH+ SPDSP+MTPIQISP+QSEIIRD+LV+LVDSEEE+  ++ WIGK++I+E++FKK
Sbjct: 266 LEVEHVSSPDSPIMTPIQISPSQSEIIRDSLVSLVDSEEEKEHNEGWIGKREINEEIFKK 325

Query: 61  QLITWLKDNNLKLAPAFDNIVST 84
           QLI WL DNNLKLAPA+DN  S+
Sbjct: 326 QLINWLNDNNLKLAPAYDNKASS 348

[Close]

BLAST of MELO3C023909 vs. NCBI nr
Match: KAA0063733.1 (hypothetical protein E6C27_scaffold1290G00140 [Cucumis melo var. makuwa] >TYK10959.1 hypothetical protein E5676_scaffold107G00420 [Cucumis melo var. makuwa])

HSP 1 Score: 111.3 bits (277), Expect = 5.5e-21
Identity = 59/107 (55.14%), Postives = 74/107 (69.16%), Query Frame = 0


Query: 1   MEVEHIPSPDSPLMTPIQISPTQSEIIRDNLVTLVDSEEEEGKSDKWIGKKKISEKLFKK 60
           MEV+H+ SP+SP+MTPIQISP+QS+II++++VT                     E LFKK
Sbjct: 278 MEVKHVSSPNSPIMTPIQISPSQSKIIKNSMVT---------------------EDLFKK 337

Query: 61  QLITWLKDNNLKLAPAFDNIVSTFTTNMGTENNIEIGYKPLGSNSSP 108
           QLI WLKDNNLKLAPAF+N  ++   NM  ENN+EIGYK  GSN+SP
Sbjct: 338 QLINWLKDNNLKLAPAFENNANSSKINMDNENNVEIGYKLSGSNNSP 363

[Close]

BLAST of MELO3C023909 vs. NCBI nr
Match: KAA0040709.1 (hypothetical protein E6C27_scaffold529G00290 [Cucumis melo var. makuwa] >TYK14278.1 hypothetical protein E5676_scaffold4170G00120 [Cucumis melo var. makuwa])

HSP 1 Score: 89.4 bits (220), Expect = 2.2e-14
Identity = 42/60 (70.00%), Postives = 50/60 (83.33%), Query Frame = 0


Query: 48  IGKKKISEKLFKKQLITWLKDNNLKLAPAFDNIVSTFTTNMGTENNIEIGYKPLGSNSSP 107
           +GKK I+E++FKKQLI WLKDNNLKLAPAFDN VS+   N+  ENN+ I Y+PLGSNSSP
Sbjct: 308 LGKKDINEEIFKKQLINWLKDNNLKLAPAFDNNVSSSKINLDNENNVGIDYEPLGSNSSP 367

[Close]

BLAST of MELO3C023909 vs. ExPASy TrEMBL
Match: A0A5D3BHT7 (Taxadiene 5-alpha hydroxylase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00510 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.8e-36
Identity = 80/107 (74.77%), Postives = 93/107 (86.92%), Query Frame = 0


Query: 1   MEVEHIPSPDSPLMTPIQISPTQSEIIRDNLVTLVDSEEEEGKSDKWIGKKKISEKLFKK 60
           ME+EHI SP+SP+MTPIQ+SPTQSEIIRD+LVTLVDSEEEE +++ W  K++ISE+LFKK
Sbjct: 374 MEMEHISSPNSPIMTPIQVSPTQSEIIRDSLVTLVDSEEEEEQNEGWTRKREISEELFKK 433

Query: 61  QLITWLKDNNLKLAPAFDNIVSTFTTNMGTENNIEIGYKPLGSNSSP 108
           QLI WLKDNNLKLA AFDN  ST   NM  ENN+EIGY+PLGSNSSP
Sbjct: 434 QLINWLKDNNLKLASAFDNFASTPKINMENENNVEIGYEPLGSNSSP 480

[Close]

BLAST of MELO3C023909 vs. ExPASy TrEMBL
Match: A0A5D3CAI5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00620 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.4e-30
Identity = 73/106 (68.87%), Postives = 86/106 (81.13%), Query Frame = 0


Query: 1   MEVEHIPSPDSPLMTPIQISPTQSEIIRDNLVTLVDSEEEEGKSDKWIGKKKISEKLFKK 60
           MEVEHI SPDSP+MTPIQ SP+QSEIIR++LV+LVD EEEE +   W GKK+IS+ LFKK
Sbjct: 219 MEVEHISSPDSPVMTPIQTSPSQSEIIRNSLVSLVDREEEEEQIKGWTGKKEISKDLFKK 278

Query: 61  QLITWLKDNNLKLAPAFDNIVSTFTTNMGTENNIEIGYKPLGSNSS 107
           Q I WLKDNNLKLAPAF+N  S+   NM  ENN+EIGY+P  SN+S
Sbjct: 279 QPINWLKDNNLKLAPAFENNASSSKINMENENNVEIGYEPSRSNNS 324

[Close]

BLAST of MELO3C023909 vs. ExPASy TrEMBL
Match: A0A5A7V4L2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold321G00310 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 4.0e-25
Identity = 59/83 (71.08%), Postives = 75/83 (90.36%), Query Frame = 0


Query: 1   MEVEHIPSPDSPLMTPIQISPTQSEIIRDNLVTLVDSEEEEGKSDKWIGKKKISEKLFKK 60
           +EVEH+ SPDSP+MTPIQISP+QSEIIRD+LV+LVDSEEE+  ++ WIGK++I+E++FKK
Sbjct: 266 LEVEHVSSPDSPIMTPIQISPSQSEIIRDSLVSLVDSEEEKEHNEGWIGKREINEEIFKK 325

Query: 61  QLITWLKDNNLKLAPAFDNIVST 84
           QLI WL DNNLKLAPA+DN  S+
Sbjct: 326 QLINWLNDNNLKLAPAYDNKASS 348

[Close]

BLAST of MELO3C023909 vs. ExPASy TrEMBL
Match: A0A5A7V6K4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G00420 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.7e-21
Identity = 59/107 (55.14%), Postives = 74/107 (69.16%), Query Frame = 0


Query: 1   MEVEHIPSPDSPLMTPIQISPTQSEIIRDNLVTLVDSEEEEGKSDKWIGKKKISEKLFKK 60
           MEV+H+ SP+SP+MTPIQISP+QS+II++++VT                     E LFKK
Sbjct: 278 MEVKHVSSPNSPIMTPIQISPSQSKIIKNSMVT---------------------EDLFKK 337

Query: 61  QLITWLKDNNLKLAPAFDNIVSTFTTNMGTENNIEIGYKPLGSNSSP 108
           QLI WLKDNNLKLAPAF+N  ++   NM  ENN+EIGYK  GSN+SP
Sbjct: 338 QLINWLKDNNLKLAPAFENNANSSKINMDNENNVEIGYKLSGSNNSP 363

[Close]

BLAST of MELO3C023909 vs. ExPASy TrEMBL
Match: A0A5A7THF9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4170G00120 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.1e-14
Identity = 42/60 (70.00%), Postives = 50/60 (83.33%), Query Frame = 0


Query: 48  IGKKKISEKLFKKQLITWLKDNNLKLAPAFDNIVSTFTTNMGTENNIEIGYKPLGSNSSP 107
           +GKK I+E++FKKQLI WLKDNNLKLAPAFDN VS+   N+  ENN+ I Y+PLGSNSSP
Sbjct: 308 LGKKDINEEIFKKQLINWLKDNNLKLAPAFDNNVSSSKINLDNENNVGIDYEPLGSNSSP 367

The following BLAST results are available for this feature:

BLAST of MELO3C023909 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ97748.1	7.9e-36	74.77	taxadiene 5-alpha hydroxylase-like [Cucumis melo var. makuwa]	[more]
TYK07346.1	2.9e-30	68.87	hypothetical protein E5676_scaffold202G00620 [Cucumis melo var. makuwa]	[more]
KAA0062230.1	8.2e-25	71.08	hypothetical protein E6C27_scaffold321G00310 [Cucumis melo var. makuwa]	[more]
KAA0063733.1	5.5e-21	55.14	hypothetical protein E6C27_scaffold1290G00140 [Cucumis melo var. makuwa] >TYK109...	[more]
KAA0040709.1	2.2e-14	70.00	hypothetical protein E6C27_scaffold529G00290 [Cucumis melo var. makuwa] >TYK1427...	[more]

BLAST of MELO3C023909 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C023909 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BHT7	3.8e-36	74.77	Taxadiene 5-alpha hydroxylase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A5D3CAI5	1.4e-30	68.87	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7V4L2	4.0e-25	71.08	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7V6K4	2.7e-21	55.14	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7THF9	1.1e-14	70.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MELO3C023909 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C023909.1	MELO3C023909.1	mRNA