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MELO3C023882.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDSstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.GGAAGTAAAGCAAAGCCTTATTGTCGTTGTCGGCAATTACTTCGGAGCCACCACGGAGAGAATTTCGGTGGTTGTACTCCACCAACGGATTTCTCATCCCCTTTTCCTTTCCTTTTCTCTACCATTTCCGATCTGCCTATTTTTTAGCGGAGGAGTCGCTGGAAAGTTCATCAAAATTCAGTCAAATATGAGTGAGGTTTTCGAGGGTTACGAGCGCCAATATTGTGAACTCTCCGCCAATGTTTCTCGGAAATCCAACTCTTTCGCCGCCTCCGATTCAGGTATTTTCTATATTTCACCTCTGATTTCAAGATAGATAGATAGATGGGATAAGTGGAATCTGGTTGTTGGAACTCCGAAGAGAATCCTTTAATTGTGGTTGGAGATCTTTGAGTTACAATTGGTAGATGCCGAGATTTCTAAACCGTGTGAGCAGGATATGAATATGGAGTTGGGATGAATTTTAGTGTTTCTTACTGGTTCTTTAGAGTTAGATTGCGAAATGACTTGCATTTGTAGAATTGGATTCTACTTTGGAAATGAACTGGAAAAAGAAGTTGATTATTGAGGGACTCTTATTTTGATTGTGAACTATTGGAATGTTTGGTGATTTTAGCTTTATGTGAATTGCAGAGCAGAAACAGCAGTGGCTTTCGGAAATCAAAGTTAGTTTGGATGAGGCTGAAGTTTTGGTATTTTTAAGGAGCCTTCTTTTCGCTTTCTTTCATTTTCTTTTTCTTTTCAAGTTGGTTAGATTCATACTGATATGCATACGATGTTTTATCTTTATTGATTGATTATCTAGATCCGGAAAATGGATCTTGAGGCTAGAAGTTTGCAGCCAGGGGTAAAAGCTATGCTACTTGCTAAGTTAAGGGAGTACAAAACTGATCTTGGTAAACTGAAAAAGGAATTTAAGAGATTGACATCACCTAATGCTGATCAGGCTGCTCGTGAAGAATTGCTGGAGTCTGGAATGGCAGATGCTCATTTGGTAGATTTTCATCATTCATATTTTACAGTTGCCTTCAAATTTTAAGTACTACATATACTCTTATCTCCTCACCAATGCTTCTTTAATCGTGAGTTGGGTTCTAAGTCTGGAAACAATTTGAGGGAGCTTATCTTTGACTGAAATGATTTTGTCTTTTATGACATAACATAAGTTTCATCTCAAAACTAATTGACAATGACAGAAGTGGTCCAACGTGTCTCTCCAAGATGGTGCTTCTTTGGGTTCGCTATTCTTAAATCTATACCCAACTCTTGTTTTTAGATTGAATCTTTGTTTAGCTTCTTGAGTGCTGATACCATATTAGAAAACTTAGGATTTCATTTTAAAACTAATTGACAATTGGAGAAGTAGCCAAACGGTTTTGATGTAAATATATGAAATATCCAAAGATTTTGTCTATTCATTTTAAAACTAATTGACAATTAGAGAAGTAGCCAAATAGTCTTGATGTAAGTATATGAAATATCCAAAGATTTTGTCTATTTTGGTAGCCTATGTTTTAGGGTACACTTAACTAGTTAAAACACTTATAACTTCCCTTATTGTTGGTTTGAATCTTCACCCCTATGTTTAAATGGTAATATTTTGTTGAAGGTATTGCATATCTTAAGTTCTCGGGCTAGTTGTAGTCATATAAAGTAATGCTATAATCAATATGGTTGTCCCTTGGTGAAAATACTCTACTCTTTTCTCCGTCCTTTTGAATTGGAAGTTTTTTGAAATTCCATCAATGGAATTTTCCCTTTAATAGTTTCTCCTCTTTTGTTATTTCATTCCATCAATCAAACTAAAAGTGCTCCGGAAAGTTTCTTCTCTTATGTTATTTCATACCATCAATGAAATTGAAAGTGCTCGGGAAACATGAGGTTTGCTATAGAACTTTCTATTTAATAAACCTTTGCGATATGAACATCTTATCGAGTCTTTGTTTTTCTTTAACCACTCTTTGGATTGAAGTGATGATGGTTTCTAAGCTTCTTTGATAGACAGGAGACTTATCTTTTCCCCTCTCAATGGCTGTGTGAGGTCTCAATAATTTAAACGGAATTTGTTTCATGAGTTAGTGTCAGTTTCTGGATGTGTTTCTATTATATACAATCATGCTGAATTTCCATCATATATCAGTCGCATATGTCTTATATATAGTTATTGTTTTAGTTCATATAATTCGTCATTTGAAATAAAGTATATTTGTCTTCCATGGGTTTAATTTAACATTTTTATTATTTTTACTGACATTGTTACAGGCTTCAGCTGATCAAAGAGAGAGGATGACAATGTCCATAGAGAGAATAAATCAGTCAGGTGAAAGAATCACAGAGAGTAGAAGAACCATGCTGGAGACCGAGGAGCTCGGTGTCTCAATCCTCCAGGACTTGCATCAACAGCGGGAAACTCTCCTCCAGTCTCATAAGAGAGTAAGTTTTGTCTTGATATTTGATATTATGTTCTGGCTGAGTAGTAAGTCCAATCTTTGATGTCATTAACATCCTTAAACTCCATAAGATGCATAGATACAGACTTGGTTCTTAACTATGAACATCCTCAAACTTCATTTCAAAAAAATAAAGACAGAAAAATTCCTTAAACTTAACACACTTGTTTTAATTTCTAGCCCTTTTAAGCATCCTTGGGATAGTTCCACTGTTAACAACATGCTTCATGCTACAGCTTCATGGGGTAGATGATGCCATTGATAAGAGTAAAAAAGTTTTGACCACAATGTCTCGAAGAATCAGTCGAAATAAATGGATCGTCGGGTCAGTAATTGGAGTTCTGGTACTTGTAATTATCCTTATACTGTATTTTAAGCTCTAATACCATCATCGAGATGTTTCCTTGATTACAAAATGAATTCTACTCTGATCATTTTAGTTTCCAATCTTACACTTGGCTGTCGATCATATATTTGATGTATTTTATTGTCGGTGTATGGTGTTCGTGTCTGTAATTGAATCAAAATCTTGAAACTCGATAGCATTCTAATTAGTCAATACCCAGTAGTTGGCATTTCTTGATTGCTTATTTAAGTAGTCAGTTACCTTCCCTATTTGCACTTAGGGAAGTGCAATAATTGCTCAATTGATTTTCTTTCCTAA GGAAGTAAAGCAAAGCCTTATTGTCGTTGTCGGCAATTACTTCGGAGCCACCACGGAGAGAATTTCGGTGGTTGTACTCCACCAACGGATTTCTCATCCCCTTTTCCTTTCCTTTTCTCTACCATTTCCGATCTGCCTATTTTTTAGCGGAGGAGTCGCTGGAAAGTTCATCAAAATTCAGTCAAATATGAGTGAGGTTTTCGAGGGTTACGAGCGCCAATATTGTGAACTCTCCGCCAATGTTTCTCGGAAATCCAACTCTTTCGCCGCCTCCGATTCAGAGCAGAAACAGCAGTGGCTTTCGGAAATCAAAGTTAGTTTGGATGAGGCTGAAGTTTTGATCCGGAAAATGGATCTTGAGGCTAGAAGTTTGCAGCCAGGGGTAAAAGCTATGCTACTTGCTAAGTTAAGGGAGTACAAAACTGATCTTGGTAAACTGAAAAAGGAATTTAAGAGATTGACATCACCTAATGCTGATCAGGCTGCTCGTGAAGAATTGCTGGAGTCTGGAATGGCAGATGCTCATTTGGCTTCAGCTGATCAAAGAGAGAGGATGACAATGTCCATAGAGAGAATAAATCAGTCAGGTGAAAGAATCACAGAGAGTAGAAGAACCATGCTGGAGACCGAGGAGCTCGGTGTCTCAATCCTCCAGGACTTGCATCAACAGCGGGAAACTCTCCTCCAGTCTCATAAGAGACTTCATGGGGTAGATGATGCCATTGATAAGAGTAAAAAAGTTTTGACCACAATGTCTCGAAGAATCAGTCGAAATAAATGGATCGTCGGGTCAGTAATTGGAGTTCTGGTACTTGTAATTATCCTTATACTGTATTTTAAGCTCTAATACCATCATCGAGATGTTTCCTTGATTACAAAATGAATTCTACTCTGATCATTTTAGTTTCCAATCTTACACTTGGCTGTCGATCATATATTTGATGTATTTTATTGTCGGTGTATGGTGTTCGTGTCTGTAATTGAATCAAAATCTTGAAACTCGATAGCATTCTAATTAGTCAATACCCAGTAGTTGGCATTTCTTGATTGCTTATTTAAGTAGTCAGTTACCTTCCCTATTTGCACTTAGGGAAGTGCAATAATTGCTCAATTGATTTTCTTTCCTAA ATGAGTGAGGTTTTCGAGGGTTACGAGCGCCAATATTGTGAACTCTCCGCCAATGTTTCTCGGAAATCCAACTCTTTCGCCGCCTCCGATTCAGAGCAGAAACAGCAGTGGCTTTCGGAAATCAAAGTTAGTTTGGATGAGGCTGAAGTTTTGATCCGGAAAATGGATCTTGAGGCTAGAAGTTTGCAGCCAGGGGTAAAAGCTATGCTACTTGCTAAGTTAAGGGAGTACAAAACTGATCTTGGTAAACTGAAAAAGGAATTTAAGAGATTGACATCACCTAATGCTGATCAGGCTGCTCGTGAAGAATTGCTGGAGTCTGGAATGGCAGATGCTCATTTGGCTTCAGCTGATCAAAGAGAGAGGATGACAATGTCCATAGAGAGAATAAATCAGTCAGGTGAAAGAATCACAGAGAGTAGAAGAACCATGCTGGAGACCGAGGAGCTCGGTGTCTCAATCCTCCAGGACTTGCATCAACAGCGGGAAACTCTCCTCCAGTCTCATAAGAGACTTCATGGGGTAGATGATGCCATTGATAAGAGTAAAAAAGTTTTGACCACAATGTCTCGAAGAATCAGTCGAAATAAATGGATCGTCGGGTCAGTAATTGGAGTTCTGGTACTTGTAATTATCCTTATACTGTATTTTAAGCTCTAA MSEVFEGYERQYCELSANVSRKSNSFAASDSEQKQQWLSEIKVSLDEAEVLIRKMDLEARSLQPGVKAMLLAKLREYKTDLGKLKKEFKRLTSPNADQAAREELLESGMADAHLASADQRERMTMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKRLHGVDDAIDKSKKVLTTMSRRISRNKWIVGSVIGVLVLVIILILYFKL Homology
BLAST of MELO3C023882.jh1 vs. NCBI nr
Match: XP_008461698.1 (PREDICTED: vesicle transport v-SNARE 12-like [Cucumis melo]) HSP 1 Score: 397 bits (1021), Expect = 1.98e-137 Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0
BLAST of MELO3C023882.jh1 vs. NCBI nr
Match: XP_004147677.1 (vesicle transport v-SNARE 12 [Cucumis sativus] >KGN50573.1 hypothetical protein Csa_021465 [Cucumis sativus]) HSP 1 Score: 389 bits (999), Expect = 4.41e-134 Identity = 214/219 (97.72%), Postives = 216/219 (98.63%), Query Frame = 0
BLAST of MELO3C023882.jh1 vs. NCBI nr
Match: XP_038889496.1 (vesicle transport v-SNARE 12-like [Benincasa hispida]) HSP 1 Score: 389 bits (999), Expect = 4.41e-134 Identity = 214/219 (97.72%), Postives = 216/219 (98.63%), Query Frame = 0
BLAST of MELO3C023882.jh1 vs. NCBI nr
Match: XP_022996461.1 (vesicle transport v-SNARE 12-like [Cucurbita maxima]) HSP 1 Score: 375 bits (964), Expect = 9.36e-129 Identity = 206/219 (94.06%), Postives = 212/219 (96.80%), Query Frame = 0
BLAST of MELO3C023882.jh1 vs. NCBI nr
Match: XP_023528822.1 (vesicle transport v-SNARE 12-like [Cucurbita pepo subsp. pepo] >KAG7030705.1 Vesicle transport v-SNARE 12 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 373 bits (958), Expect = 7.66e-128 Identity = 205/219 (93.61%), Postives = 211/219 (96.35%), Query Frame = 0
BLAST of MELO3C023882.jh1 vs. ExPASy Swiss-Prot
Match: Q9SEL5 (Vesicle transport v-SNARE 12 OS=Arabidopsis thaliana OX=3702 GN=VTI12 PE=1 SV=3) HSP 1 Score: 274.2 bits (700), Expect = 1.7e-72 Identity = 149/220 (67.73%), Postives = 186/220 (84.55%), Query Frame = 0
BLAST of MELO3C023882.jh1 vs. ExPASy Swiss-Prot
Match: Q9LVP9 (Vesicle transport v-SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=VTI13 PE=2 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 1.7e-67 Identity = 139/219 (63.47%), Postives = 176/219 (80.37%), Query Frame = 0
BLAST of MELO3C023882.jh1 vs. ExPASy Swiss-Prot
Match: Q9SEL6 (Vesicle transport v-SNARE 11 OS=Arabidopsis thaliana OX=3702 GN=VTI11 PE=1 SV=2) HSP 1 Score: 254.2 bits (648), Expect = 1.9e-66 Identity = 135/219 (61.64%), Postives = 177/219 (80.82%), Query Frame = 0
BLAST of MELO3C023882.jh1 vs. ExPASy Swiss-Prot
Match: O89116 (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Mus musculus OX=10090 GN=Vti1a PE=1 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 5.6e-23 Identity = 71/213 (33.33%), Postives = 125/213 (58.69%), Query Frame = 0
BLAST of MELO3C023882.jh1 vs. ExPASy Swiss-Prot
Match: Q96AJ9 (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Homo sapiens OX=9606 GN=VTI1A PE=1 SV=2) HSP 1 Score: 107.8 bits (268), Expect = 2.1e-22 Identity = 68/214 (31.78%), Postives = 126/214 (58.88%), Query Frame = 0
BLAST of MELO3C023882.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CFT2 (vesicle transport v-SNARE 12-like OS=Cucumis melo OX=3656 GN=LOC103500237 PE=3 SV=1) HSP 1 Score: 397 bits (1021), Expect = 9.57e-138 Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0
BLAST of MELO3C023882.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KLX2 (PH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G182770 PE=3 SV=1) HSP 1 Score: 389 bits (999), Expect = 2.14e-134 Identity = 214/219 (97.72%), Postives = 216/219 (98.63%), Query Frame = 0
BLAST of MELO3C023882.jh1 vs. ExPASy TrEMBL
Match: A0A6J1K4T5 (vesicle transport v-SNARE 12-like OS=Cucurbita maxima OX=3661 GN=LOC111491702 PE=3 SV=1) HSP 1 Score: 375 bits (964), Expect = 4.53e-129 Identity = 206/219 (94.06%), Postives = 212/219 (96.80%), Query Frame = 0
BLAST of MELO3C023882.jh1 vs. ExPASy TrEMBL
Match: A0A6J1FWM6 (vesicle transport v-SNARE 12-like OS=Cucurbita moschata OX=3662 GN=LOC111448046 PE=3 SV=1) HSP 1 Score: 372 bits (955), Expect = 1.06e-127 Identity = 204/219 (93.15%), Postives = 211/219 (96.35%), Query Frame = 0
BLAST of MELO3C023882.jh1 vs. ExPASy TrEMBL
Match: A0A6J1CB35 (vesicle transport v-SNARE 12-like OS=Momordica charantia OX=3673 GN=LOC111009979 PE=3 SV=1) HSP 1 Score: 362 bits (929), Expect = 1.07e-123 Identity = 199/219 (90.87%), Postives = 209/219 (95.43%), Query Frame = 0
BLAST of MELO3C023882.jh1 vs. TAIR 10
Match: AT1G26670.1 (Vesicle transport v-SNARE family protein ) HSP 1 Score: 274.2 bits (700), Expect = 1.2e-73 Identity = 149/220 (67.73%), Postives = 186/220 (84.55%), Query Frame = 0
BLAST of MELO3C023882.jh1 vs. TAIR 10
Match: AT5G39510.1 (Vesicle transport v-SNARE family protein ) HSP 1 Score: 254.2 bits (648), Expect = 1.3e-67 Identity = 135/219 (61.64%), Postives = 177/219 (80.82%), Query Frame = 0
BLAST of MELO3C023882.jh1 vs. TAIR 10
Match: AT3G29100.1 (vesicle transport V-snare 13 ) HSP 1 Score: 201.8 bits (512), Expect = 7.8e-52 Identity = 107/168 (63.69%), Postives = 137/168 (81.55%), Query Frame = 0
BLAST of MELO3C023882.jh1 vs. TAIR 10
Match: AT3G29100.2 (vesicle transport V-snare 13 ) HSP 1 Score: 198.0 bits (502), Expect = 1.1e-50 Identity = 106/165 (64.24%), Postives = 134/165 (81.21%), Query Frame = 0
BLAST of MELO3C023882.jh1 vs. TAIR 10
Match: AT5G39630.1 (Vesicle transport v-SNARE family protein ) HSP 1 Score: 134.0 bits (336), Expect = 2.0e-31 Identity = 80/189 (42.33%), Postives = 122/189 (64.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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