MELO3C023845.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C023845.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Descriptionserine/arginine-rich SC35-like splicing factor SCL30
Locationchr10: 6351939 .. 6357173 (-)
RNA-Seq ExpressionMELO3C023845.jh1
SyntenyMELO3C023845.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCCAAAAATCAGATCAAAGGAAGAGTCTTTCTACGCATTTTCTCCTCTTCATTCTCTTACCTTCAGGTAATTATGAACTTACGATACCTGGATTCACTATTTCGTTTATAGATGTTTATCTAGATTATTCTTGGTCGAACCCTAAACCCATAGTTGTTTACCGCTACTTTCTTTGTTTCGATCATTCCGAATTAGCTGTTTCCCTTCACTCTTAGTTTGAATCATCTCTTTGCGTTTCTTTAGGTCAAGAATTGGGAAAAGAATAGGTGATAAGAGGACCCTTTTTGTCGAACCCTCTTGATTCCCTTTTAATATATATATGGATGTATCTTGTGTGGGTTTATAATCTTCAACATTTTTAACATTTATCGTAGCAGGCAATTGAGAGTTTCAGTGAGACCTGAGCCTATGAAGTGTAGCTTAGGGTTTTAACAGTCAGAACCCCTTTTCAGTTTAGGATCATAAGTGGGTGTCATTGGATTAACTACTATTCTATTTAGGTAGTAATTAGTTTGAATTGGTAGGAAGTTGACAATATGCATCTTAATTGCTGACCTCACCTGATCATTGTTGTGGACAGGTTGAAACATGAGAAGATACAGTCCACCATACCATAGTCCACCAAGAAGAGGGTATGGTGGTCGTGGAAGAAGCCCCCCGGGTAGGGGTTATGGTGGTGGCGGTGGCGGTGGCGGTGGGTATGGAAGGCGAAGGGAACAGCCTCATGGTAGCCTTTTGGTTAGAAATATTCCTATGGATTGCAGGTCAGGATTTCACCACTTTTTTTCAGCTACCTTATTGCTTTGTCCAATTTAGGTTTCAGTACTAACTACTACTTTTCTAATTAATGAATTTATTGTTTTCTTTCACTGCATTTAAAGAACTTGACTTTTGGTTGTAATGGTACATTTAGGCCGGAGGAGCTTAGAGCGCCGTTTGAGAGGTTTGGACTTGTTCGTGATGTGTATATTCCAAAGGACTATTACACAGGGTGAGCATCTTGTGTTTATTTTTCTTATTTGTTATTCATTCCACTCAATCCATGGTATGTGTTGGATTTATCGAGCTGTTATTCTACCTGATTTGCGAACGTGTACTTCTACTTTCCTTGTACTTTCCTTGTGAGTTAGTTTGGTAATGACACATCATTAAGATTTGATCAAATGAACCTCATGCAGGGTTCGGGTGGTAATTTTAGGTTTACTTGTTAAGCATTACGCCAAGCCTTTTGAGTTAGAACTTGTTACTTTCTCTTGTTTGATGCTCTCAGTCGTGTGCTAAGCTTCATATATAGGTCAATCATGATCATATTCATAATATATAGAGCACATTTAAAGCTTTTCTAATTTGCATTTCAAGATTCTATTGTCAGAAAAATGCCTGATTTTCTTTTTCTTCTTTCTGGAAAGAACTCTCAAGTGCCTACATACGCAAGATGAAATAAACTCTTAAGCAACTGTTGGGGGACTCTTTTACAACTACCTTTTAACTTGATCAATTCTTGAGGGTGTAATATGTGCACTGAACTGAGTTCTAATTTTTTTAGACAATTTTTTTAGATTGTATGGAACATCCAGTTGAGTTTGTTATTCATAGTCAGGGAATGAAGAGGATGAACAATGTCAAATGAAATTTCACCGGACCTTATTTTTTCTGGATGGATCTTATTCCCATTTCATAGTGTGTTTTGAACTGCTTTGTCAGGGGGCATATTGGTTAGAACTTTGAAGTTAAAACAAGCCCAAGCCCCTTTTAATGAGGGTCTACTACCTTCCACCGCCTAACATATAGCTCATCAAGAATGAAAAGAATAATATCGAAATGAGGGTGTCTCTCTCTGAGGAGACATTAGATAACCACACCCATCAATAGAAGTTGATAAGGAAGAGGGTTGATTCTTGAGCAATTGAAGCCAACAAGTTGAAGGTTTCATAGTTGTGGAATCTTTGTTCAAGTGCTTCATTTCCAAGCGTTTGAAGAATAGTCACAAATTTTTGGTTTCAAGTAATTATATCAAGAAATGTGAAGTTTATGAGGAGGAAGGTATATTCTTGAGCAATTGAAGCCAACAAGGTGAAGGTTTTAAGGTTGTGGAATGTTTGTTCAAGTGCTTCATGTGTTCCAAGTGTGTGAAGAATTTTCAACTCATGAATTGTTGGTTTACTTATATCAAGAAATATGAAGATTTGTCAAGTCAAGTTACGTTGAATTGAAGTGCTTATAGTTACAAGAATATGAAGATTTTTCAAGTCACTTGCCTCTTTCATGCTTGATTGTAAAGATAAGGTTAGCTACTAAACTTTGAAATTCGCTGTGCTTTATGTAACTCCAGCCCCAGCTTTGATGAAAGCAGTCTGAAGTTAATGCTGGATATGAAAAGAAAGCTATTTAGTTTACGACATCCCAAATCCTTTTAGCCATGAAAATGTATATTAATGTAGTCATTCACCCTTATTACCCAAGATTTGTATCCAGAATGGGTTTCTTATTTTTATCTCTGTTTTTTTTCCTTAAATCTTTTGTAGTGAGCCTCGAGGATTTGCATTTGTGGAGTTTGTTGATCCTTACGAGGCTTCTGAAGCTCAGTACCATATGAATGGGAAAAAATTTGCTGGTAGGGAGATTACTGTGGTCCTTGCTGCAGAGTCGAGGAAGAGGCCAGAACAGATGCGCCAAAGAAGTAGAAGGTAGTTTGTTTATTCTCATTTTCCTCTTTTTCTCAATGGTTTCAGGGAACAGCAAATTTAGTATTCGCCCCCTTGCATCTACTTTCAAGTTTGAGTTGCATGGTTGTTTGCTTGAGCCTTAAAGAAATATACTCATTATTGTTCATCCGGTAAAAAGTCTCAGTTCTTTTCTGTATTGTAACCAAGCTGCAAGCATCTATATCTTATATAATGTTTATTTAGTGGGGTGGGGTGGATCAAAATCAATCTAAAACTCTCAGTTCTTTCCATTCTCTGTATATAGTGGCTAACAGCCTTTTATTAGTTGCAAGTTACATGTTTTTTACTATTCCCTTTTTTCCTCTTTGCAGGGGACCATCTGGCTACGGTGGACGCCGTTCTCATTATGGTATGGGTACAATCAGTCTCTCTTCAAATTTTACTAACCTTATCTTTAAATAGCTTTTTTAGTTAAGTGAAAACCCCAACATAAAAAAGTGAGAAGTCCTCTTATATTCTAATTCTCAATTTCTAGTTCATGGTAAAGTTTTTTAACTGTTCAAGAAGTCTAGCATCATGTATGGTTCTTCCCTCACAATGTTACCTGCAAAGTTTAGTAAAGAGCACATCACAACAATTTCAAGGGCAATGACACCGTTCTATTAGCAGGAATAAGGAAAAGGTTGAAAACACCAGTTAGCTAGAAGTAGAACATATCAGAAACAGAAAGATAGTTAACCAAGAGAGTTGCCCCACCCCACCAAAACCCCGCATAATCAACCTGCCCTTCACAAATAAACCTGGCACACCTCACTAACCCACAAACTAACAGCCAGTGTTCGAATTTCCTGATTTACTTCTAGAATATGTCTTCTTGTGTGTGTGTGTGTGTGGGTGGGTGGGGGGCTCACAGATTACTACTTGTTATGGAACTGTTGGACATTACAGCTTGAAGCAGTAGCATATGGGAATTATTTCTAAGATGCACGTGTATTCTTATTTGACTTTTCTTGAGACCTAAGATTGTTGTATTTATTTGCAAGCTCTCAGTTAAATGGTTTTATATATCATTTAGATGGACTCTTTATTTTATTTTTTGTGCAATGATCTTAGTAGTTTCACATGCAGACAGATGAATTATGGTATTTAAATTGTCCTTTTACTAGAATCATTCTTTCCTTATTTGGTCCTCGGCTCTGAACCTTTTTTTCAACATGCAACTTCTTTTATTAGGTTCAAATATAAACATATAATAATTCCTTTTGGGTTTATTGGGTTCCTTAAGTGAGTGTGTGTGTCTCAACTTAGCATAACGTCAACTCCTTTGTTATGAAATTTTGAGTGTGCAGTTTAATTGCTAAAATTAAAAACGAACCTCTTCTGTAGTCTGTGCATTTATTTGTTTGTGGTATTGTAGGCTTCAATTTCTTACTAAATTTCAAGTGCACATACTTCAGCTTCTTCTAAAAAAATTACACATTCATGCTCGGAATCAAACCAATCCTTAATTATTGTACTGGACAAAATATGGCCATTTTGGATTTTTGTATTCAATGATCAAACCTGGTTTCAGGCAGTAGTTGTTCATTTGATTTGATTTTTTTTTTGTTGGGGTTCATATAGGACGTTCAAGATCTCGTTCAGTATCCAGATCACGCTCCCCTCGCCATCCTTCGGGTTCAAGAAGTAGATACCGATCAAGGTAATCTTCTATTTAAAACACCTGGTTCACATTTATTAATGCTCCAGATAGTTGTAAATATGCCATAAGAGAAATTGTCAGGTCTTACTCTCCAGCTCCGAGGTGGCGAGGCGACTATTCTGTTTCCCCTGGTAGAAGGCACGCAGAGTACCCTGAATCACCTAGAGGTGCTCCTCGTGAGCGAGATGTTGAGAGGAGCCGACAAGTATATTCTCCTGGTTATGATAATGCTGATGAGCACGATCAGAATGGAAATGGATATCATGAGTAAGTTGTATGATTTACTGATGAATTTTGAGTACCTGCCTGACTGTGTGGTTCCTTTCATGTTCTTGTTGGCAACATGACATTTTCCCATAATTTCAGCCATTTTGCAATTTTGACTTCATTGCTTTTCTGGCAGCACCTTGAACATGAGACTATTTTTGGTGTTTTTCATTTTTTTTAAATCATATACTTCATCATATTTGTTTACTGTGCTCGTTTAGAAATATGTTCTATTCGGTTTTATTTATACGTCGATCCATTTTCGCTTCTTTTAGCAAGTCTGGATTTGAAGGGGAGGATGCACGAGGTAATTGGAGGTCGTCTCCTGGTAGAACATCAAGATCCCCATCGGGGTCCCGATCCCGCTCTGCTGATGCGTCCCCCAGACACGGTAGATGATTTTTCTTTGAGAAAATATGACAGTAGATGATGTAAACCATCTTTTCTAATATAAAACATTTGTTATTATCCACTATCCAGGAGAAGTTTTTAGATTGTATTTTGTAAGATGTTCTTGGGCGTGTTGGGATTTTCTAGACCGGGGAATCTTATTTGCTCTCATTTGAAGTTTAAAAAATATTATGCTACTTTTCTGGATA

mRNA sequence

TCCCAAAAATCAGATCAAAGGAAGAGTCTTTCTACGCATTTTCTCCTCTTCATTCTCTTACCTTCAGGTTGAAACATGAGAAGATACAGTCCACCATACCATAGTCCACCAAGAAGAGGGTATGGTGGTCGTGGAAGAAGCCCCCCGGGTAGGGGTTATGGTGGTGGCGGTGGCGGTGGCGGTGGGTATGGAAGGCGAAGGGAACAGCCTCATGGTAGCCTTTTGGTTAGAAATATTCCTATGGATTGCAGGCCGGAGGAGCTTAGAGCGCCGTTTGAGAGGTTTGGACTTGTTCGTGATGTGTATATTCCAAAGGACTATTACACAGGTGAGCCTCGAGGATTTGCATTTGTGGAGTTTGTTGATCCTTACGAGGCTTCTGAAGCTCAGTACCATATGAATGGGAAAAAATTTGCTGGTAGGGAGATTACTGTGGTCCTTGCTGCAGAGTCGAGGAAGAGGCCAGAACAGATGCGCCAAAGAAGTAGAAGGGGACCATCTGGCTACGGTGGACGCCGTTCTCATTATGGACGTTCAAGATCTCGTTCAGTATCCAGATCACGCTCCCCTCGCCATCCTTCGGGTTCAAGAAGTAGATACCGATCAAGGTCTTACTCTCCAGCTCCGAGGTGGCGAGGCGACTATTCTGTTTCCCCTGGTAGAAGGCACGCAGAGTACCCTGAATCACCTAGAGGTGCTCCTCGTGAGCGAGATGTTGAGAGGAGCCGACAAGTATATTCTCCTGGTTATGATAATGCTGATGAGCACGATCAGAATGGAAATGGATATCATGACAAGTCTGGATTTGAAGGGGAGGATGCACGAGGTAATTGGAGGTCGTCTCCTGGTAGAACATCAAGATCCCCATCGGGGTCCCGATCCCGCTCTGCTGATGCGTCCCCCAGACACGGTAGATGATTTTTCTTTGAGAAAATATGACAGTAGATGATGTAAACCATCTTTTCTAATATAAAACATTTGTTATTATCCACTATCCAGGAGAAGTTTTTAGATTGTATTTTGTAAGATGTTCTTGGGCGTGTTGGGATTTTCTAGACCGGGGAATCTTATTTGCTCTCATTTGAAGTTTAAAAAATATTATGCTACTTTTCTGGATA

Coding sequence (CDS)

ATGAGAAGATACAGTCCACCATACCATAGTCCACCAAGAAGAGGGTATGGTGGTCGTGGAAGAAGCCCCCCGGGTAGGGGTTATGGTGGTGGCGGTGGCGGTGGCGGTGGGTATGGAAGGCGAAGGGAACAGCCTCATGGTAGCCTTTTGGTTAGAAATATTCCTATGGATTGCAGGCCGGAGGAGCTTAGAGCGCCGTTTGAGAGGTTTGGACTTGTTCGTGATGTGTATATTCCAAAGGACTATTACACAGGTGAGCCTCGAGGATTTGCATTTGTGGAGTTTGTTGATCCTTACGAGGCTTCTGAAGCTCAGTACCATATGAATGGGAAAAAATTTGCTGGTAGGGAGATTACTGTGGTCCTTGCTGCAGAGTCGAGGAAGAGGCCAGAACAGATGCGCCAAAGAAGTAGAAGGGGACCATCTGGCTACGGTGGACGCCGTTCTCATTATGGACGTTCAAGATCTCGTTCAGTATCCAGATCACGCTCCCCTCGCCATCCTTCGGGTTCAAGAAGTAGATACCGATCAAGGTCTTACTCTCCAGCTCCGAGGTGGCGAGGCGACTATTCTGTTTCCCCTGGTAGAAGGCACGCAGAGTACCCTGAATCACCTAGAGGTGCTCCTCGTGAGCGAGATGTTGAGAGGAGCCGACAAGTATATTCTCCTGGTTATGATAATGCTGATGAGCACGATCAGAATGGAAATGGATATCATGACAAGTCTGGATTTGAAGGGGAGGATGCACGAGGTAATTGGAGGTCGTCTCCTGGTAGAACATCAAGATCCCCATCGGGGTCCCGATCCCGCTCTGCTGATGCGTCCCCCAGACACGGTAGATGA

Protein sequence

MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHAEYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR
Homology
BLAST of MELO3C023845.jh1 vs. NCBI nr
Match: XP_008461655.1 (PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis melo] >XP_008461656.1 PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis melo] >XP_008461657.1 PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis melo])

HSP 1 Score: 538 bits (1386), Expect = 1.61e-192
Identity = 279/280 (99.64%), Postives = 280/280 (100.00%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRP 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRP
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRP 60

Query: 61  EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120
           EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV
Sbjct: 61  EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120

Query: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY 180
           VLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY
Sbjct: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY 180

Query: 181 SPAPRWRGDYSVSPGRRHAEYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGYHD 240
           SPAPRWRGDYSVSPGRRHA+YPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGYHD
Sbjct: 181 SPAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGYHD 240

Query: 241 KSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR 280
           KSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR
Sbjct: 241 KSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR 280

BLAST of MELO3C023845.jh1 vs. NCBI nr
Match: XP_038892248.1 (serine/arginine-rich SC35-like splicing factor SCL30 isoform X2 [Benincasa hispida])

HSP 1 Score: 511 bits (1317), Expect = 5.68e-182
Identity = 269/283 (95.05%), Postives = 274/283 (96.82%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGG---YGRRREQPHGSLLVRNIPMD 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGG   YGRRREQPHGSLLVRNIPMD
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMD 60

Query: 61  CRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 120
           CRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE
Sbjct: 61  CRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 120

Query: 121 ITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRS 180
           ITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRS+SRSRSPRHPSGSRSRYRS
Sbjct: 121 ITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSISRSRSPRHPSGSRSRYRS 180

Query: 181 RSYSPAPRWRGDYSVSPGRRHAEYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNG 240
           RSYSPAPRWRGDYSVSP RRHA+YPESPRG PRERD ER+RQVYSPGYDNAD+H+ NGNG
Sbjct: 181 RSYSPAPRWRGDYSVSPSRRHADYPESPRG-PRERDAERNRQVYSPGYDNADDHNHNGNG 240

Query: 241 YHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR 280
           YHDKS FEGEDAR NWRSSPGRTSRSPSGSRSRSADASPRHGR
Sbjct: 241 YHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHGR 282

BLAST of MELO3C023845.jh1 vs. NCBI nr
Match: XP_038892246.1 (serine/arginine-rich SC35-like splicing factor SCL30 isoform X1 [Benincasa hispida] >XP_038892247.1 serine/arginine-rich SC35-like splicing factor SCL30 isoform X1 [Benincasa hispida])

HSP 1 Score: 506 bits (1303), Expect = 8.63e-180
Identity = 269/286 (94.06%), Postives = 274/286 (95.80%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGG---YGRRREQPHGSLLVRNIPMD 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGG   YGRRREQPHGSLLVRNIPMD
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMD 60

Query: 61  CRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 120
           CRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE
Sbjct: 61  CRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 120

Query: 121 ITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYG---RSRSRSVSRSRSPRHPSGSRSR 180
           ITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYG   RSRSRS+SRSRSPRHPSGSRSR
Sbjct: 121 ITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGSMGRSRSRSISRSRSPRHPSGSRSR 180

Query: 181 YRSRSYSPAPRWRGDYSVSPGRRHAEYPESPRGAPRERDVERSRQVYSPGYDNADEHDQN 240
           YRSRSYSPAPRWRGDYSVSP RRHA+YPESPRG PRERD ER+RQVYSPGYDNAD+H+ N
Sbjct: 181 YRSRSYSPAPRWRGDYSVSPSRRHADYPESPRG-PRERDAERNRQVYSPGYDNADDHNHN 240

Query: 241 GNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR 280
           GNGYHDKS FEGEDAR NWRSSPGRTSRSPSGSRSRSADASPRHGR
Sbjct: 241 GNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHGR 285

BLAST of MELO3C023845.jh1 vs. NCBI nr
Match: XP_022139086.1 (serine/arginine-rich SC35-like splicing factor SCL30 [Momordica charantia])

HSP 1 Score: 493 bits (1269), Expect = 1.36e-174
Identity = 261/286 (91.26%), Postives = 266/286 (93.01%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRP 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQ HGSLLVRNIPMDCRP
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQSHGSLLVRNIPMDCRP 60

Query: 61  EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120
           EELRAPFERFGLVRDVYIPKDYY+GEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV
Sbjct: 61  EELRAPFERFGLVRDVYIPKDYYSGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120

Query: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY 180
           VLAAESRKRPEQMRQRSRRGPSGYGGRRS+YGRSRSRSVSRSRSP HPSGSRSRYRSRSY
Sbjct: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY 180

Query: 181 SPAPRWRGDYSVSPGRRHAEYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGYHD 240
           SPAPRWRGDYSVSP RRHA+YP SPRGAP ERD ERS+Q YSPGYDNAD HD +GNGYHD
Sbjct: 181 SPAPRWRGDYSVSPSRRHADYPRSPRGAPHERDGERSQQAYSPGYDNADGHDHDGNGYHD 240

Query: 241 KSGFEGEDARGNWRSSPGRTS------RSPSGSRSRSADASPRHGR 280
           KS FEG D R NWRSSPGR S      RSPSGSRSRSADASPRHGR
Sbjct: 241 KSAFEGGDVRANWRSSPGRRSSPGRISRSPSGSRSRSADASPRHGR 286

BLAST of MELO3C023845.jh1 vs. NCBI nr
Match: XP_031741884.1 (LOW QUALITY PROTEIN: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis sativus])

HSP 1 Score: 493 bits (1268), Expect = 1.86e-174
Identity = 266/285 (93.33%), Postives = 269/285 (94.39%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYG---RRREQPHGSLLVRNIPMD 60
           MRRYSPPYHSPPRRGYGGRGRSPPG GYGGGGGGGGG      RREQPHGSLLVRNIPMD
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGXGYGGGGGGGGGVVVGMERREQPHGSLLVRNIPMD 60

Query: 61  CRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 120
           CRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE
Sbjct: 61  CRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 120

Query: 121 ITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRS 180
           ITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRS
Sbjct: 121 ITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRS 180

Query: 181 RSYSPAPRWRGDYSVSPGRRHAEYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNG 240
           RSYSPAPRWRGDYSVSPGRRH +YPESPRGAPRERDVERSRQVYSPGYDNADEH QNGNG
Sbjct: 181 RSYSPAPRWRGDYSVSPGRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQNGNG 240

Query: 241 YHDKS-GFEGED-ARGNWRSSPGRTSRSPSGSRSRSADASPRHGR 280
           YHDKS   E +D  R NWR+SPGRTSRSPSGSRSRSADASPRHGR
Sbjct: 241 YHDKSPSVEHQDHLRVNWRASPGRTSRSPSGSRSRSADASPRHGR 285

BLAST of MELO3C023845.jh1 vs. ExPASy Swiss-Prot
Match: Q8L3X8 (Serine/arginine-rich SC35-like splicing factor SCL30 OS=Arabidopsis thaliana OX=3702 GN=SCL30 PE=1 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 6.2e-77
Identity = 183/287 (63.76%), Postives = 205/287 (71.43%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPM 60
           MRRYSPPY+SPPRRGYGGRGRS    PP RGYGGGGGGGG    RR   HGSLLVRNIP+
Sbjct: 1   MRRYSPPYYSPPRRGYGGRGRSPPPPPPRRGYGGGGGGGG----RRGSSHGSLLVRNIPL 60

Query: 61  DCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGR 120
           DCRPEELR PFERFG VRDVYIP+DYY+G+PRGFAFVEFVD Y+A EAQ  MN + FAGR
Sbjct: 61  DCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFAGR 120

Query: 121 EITVVLAAESRKRPEQMRQRSR-RGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRY 180
           EITVV+A+ESRKRPE+MR ++R R     G R   +GRSRSRS+SRSRSPR PS SRSRY
Sbjct: 121 EITVVVASESRKRPEEMRVKTRTRSREPSGSRDRSHGRSRSRSISRSRSPRRPSDSRSRY 180

Query: 181 RSRSYSPAPRWRGDYSVSPGRRHAEYPESPRGAPRERDVERSRQVYSPGYDN----ADEH 240
           RSRSYSPAPR RG                PRG   E D   SR+ YSPGY+     A + 
Sbjct: 181 RSRSYSPAPRRRGG--------------PPRG---EEDENYSRRSYSPGYEGAAAAAPDR 240

Query: 241 DQNG-NGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPR 278
           D+NG N   +K G+E ED R   R+     SRSPSGSRSRS + SPR
Sbjct: 241 DRNGDNEIREKPGYEAEDRRRGGRA----VSRSPSGSRSRSVEVSPR 262

BLAST of MELO3C023845.jh1 vs. ExPASy Swiss-Prot
Match: Q9SEU4 (Serine/arginine-rich SC35-like splicing factor SCL33 OS=Arabidopsis thaliana OX=3702 GN=SCL33 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.6e-32
Identity = 126/276 (45.65%), Postives = 154/276 (55.80%), Query Frame = 0

Query: 2   RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPE 61
           R Y+P   SPP RGYG RGRSP  RG  G        GR R+ P  SLLVRN+  DCR E
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPRGRYG--------GRSRDLP-TSLLVRNLRHDCRQE 63

Query: 62  ELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVV 121
           +LR  FE+FG V+D+Y+P+DYYTG+PRGF FV+F+DP +A++A++HM+G    GRE+TVV
Sbjct: 64  DLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVV 123

Query: 122 LAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYS 181
            A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS    
Sbjct: 124 FAEENRKKPTEMRARERG-----GGRFRDRRRTPPRYYSRSRSP-PPRRGRSRSRS---- 183

Query: 182 PAPRWRGDYSVSPGRRHAEYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGYHDK 241
                 GDY   P RRH     SPR    ER   R     SP  D +    ++      K
Sbjct: 184 ------GDYYSPPPRRHHPRSISPR---EERYDGRRSYSRSPASDGS--RGRSLTPVRGK 242

Query: 242 SGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPR 278
           S       R +   SP R SRSPS  R+RS   SPR
Sbjct: 244 SRSLSPSPRRSISRSP-RRSRSPSPKRNRS--VSPR 242

BLAST of MELO3C023845.jh1 vs. ExPASy Swiss-Prot
Match: Q9LHP2 (Serine/arginine-rich SC35-like splicing factor SCL30A OS=Arabidopsis thaliana OX=3702 GN=SCL30A PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.8e-31
Identity = 116/282 (41.13%), Postives = 153/282 (54.26%), Query Frame = 0

Query: 2   RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPE 61
           R Y+P   SPP RGYG RGRSP  RG  GG         R      SLLVRN+  DCR E
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPRGRFGGS--------RDSDLPTSLLVRNLRHDCRQE 63

Query: 62  ELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVV 121
           +LR PFE+FG V+D+Y+P+DYYTG+PRGF F++F+DP +A+EA++ M+G    GRE+TVV
Sbjct: 64  DLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVV 123

Query: 122 LAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYS 181
            A E+RK+P +MR R R      GGR + +   R      SRSP    G RSR RSR Y+
Sbjct: 124 FAEENRKKPTEMRTRDR------GGRSNRFQDRRRSPPRYSRSPPPRRGRRSRSRSRGYN 183

Query: 182 PAPRWRGDYSVSPGRRHAEYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGYHDK 241
                       P +RH    +S   +P++R  E+ R      Y  +  H    NG   +
Sbjct: 184 S----------PPAKRH----QSRSVSPQDRRYEKER-----SYSRSPPH----NGSRVR 243

Query: 242 SGFEG---EDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR 281
           SG  G     +R   RS   R +RS +  ++RS    PR  R
Sbjct: 244 SGSPGRVKSHSRSPRRSVSPRKNRSYTPEQARSQSPVPRQSR 244

BLAST of MELO3C023845.jh1 vs. ExPASy Swiss-Prot
Match: Q1PDV2 (Serine/arginine-rich SC35-like splicing factor SCL28 OS=Arabidopsis thaliana OX=3702 GN=SCL28 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 9.7e-22
Identity = 91/228 (39.91%), Postives = 116/228 (50.88%), Query Frame = 0

Query: 2   RRYS--PPYHSPP--RRGYGGR--GRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIP 61
           R YS  P   SPP  R+GY        P  R +   G  G             LL+RN+P
Sbjct: 9   RSYSPRPRDRSPPRERKGYDDNRLRERPSSRDHESSGPSG-------------LLIRNLP 68

Query: 62  MDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAG 121
           +D RP +LR  FERFG ++D+Y+P++YYTGEPRGF FV++    +A+EA   MN K   G
Sbjct: 69  LDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRMNHKVIGG 128

Query: 122 REITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRY 181
           REI +V A E+RK P++MR       +G  GR   Y R+  RS  R    R+ S SRSR 
Sbjct: 129 REIAIVFAEENRKTPQEMRT-----TNGTSGRHGDYKRTSHRSPRR----RYRSHSRSRS 188

Query: 182 RSRSYSPAPRWRGDYSVSPGRRHAEYPESPRGAPRERDVERSRQVYSP 224
             R  S   + R D   SP RR      SP   PR     +SR   SP
Sbjct: 189 PPRRESRHSKVREDDLYSPRRRSRSISRSP--LPRNEREYKSRNCRSP 212

BLAST of MELO3C023845.jh1 vs. ExPASy Swiss-Prot
Match: Q9BRL6 (Serine/arginine-rich splicing factor 8 OS=Homo sapiens OX=9606 GN=SRSF8 PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.6e-19
Identity = 93/238 (39.08%), Postives = 119/238 (50.00%), Query Frame = 0

Query: 48  SLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYH 107
           +L V N+     P+ LR  FE++G V DVYIP++ +T  PRGFAFV F D  +A +A+  
Sbjct: 15  TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAA 74

Query: 108 MNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPS---GYGGRRSHYGR----SRSRSVS 167
           M+G +  GRE+ V +A   R+   + RQ   RG S   GYG R   YGR     R R  S
Sbjct: 75  MDGAELDGRELRVQVARYGRRDLPRSRQGEPRGRSRGGGYGRRSRSYGRRSRSPRRRHRS 134

Query: 168 RSRSPR-HPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHAEYPESPRGAPRERDVERSRQ 227
           RSR P    S SRSRYR   YS +P  R  YS       + Y  SP    R R+      
Sbjct: 135 RSRGPSCSRSRSRSRYRGSRYSRSPYSRSPYS------RSRYSRSPYSRSRYRESRYGGS 194

Query: 228 VY-SPGYDNADEHDQNGNGYHDKSGFE-GEDARGNWRSSPGRTSRSPSGSRSRSADAS 276
            Y S GY N+     + +  H KSG      +    +SS  R S+S S SRSRS   S
Sbjct: 195 HYSSSGYSNSRYSRYHSSRSHSKSGSSTSSRSASTSKSSSARRSKSSSVSRSRSRSRS 246

BLAST of MELO3C023845.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CFP8 (serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucumis melo OX=3656 GN=LOC103500205 PE=4 SV=1)

HSP 1 Score: 538 bits (1386), Expect = 7.78e-193
Identity = 279/280 (99.64%), Postives = 280/280 (100.00%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRP 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRP
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRP 60

Query: 61  EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120
           EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV
Sbjct: 61  EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120

Query: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY 180
           VLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY
Sbjct: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY 180

Query: 181 SPAPRWRGDYSVSPGRRHAEYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGYHD 240
           SPAPRWRGDYSVSPGRRHA+YPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGYHD
Sbjct: 181 SPAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGYHD 240

Query: 241 KSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR 280
           KSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR
Sbjct: 241 KSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR 280

BLAST of MELO3C023845.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KNV5 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G181460 PE=4 SV=1)

HSP 1 Score: 503 bits (1295), Expect = 7.17e-179
Identity = 270/286 (94.41%), Postives = 273/286 (95.45%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGG----YGRRREQPHGSLLVRNIPM 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGG    YGRRREQPHGSLLVRNIPM
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPM 60

Query: 61  DCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGR 120
           DCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGR
Sbjct: 61  DCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGR 120

Query: 121 EITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYR 180
           EITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYR
Sbjct: 121 EITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYR 180

Query: 181 SRSYSPAPRWRGDYSVSPGRRHAEYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGN 240
           SRSYSPAPRWRGDYSVSPGRRH +YPESPRGAPRERDVERSRQVYSPGYDNADEH QNGN
Sbjct: 181 SRSYSPAPRWRGDYSVSPGRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQNGN 240

Query: 241 GYHDKS-GFEGED-ARGNWRSSPGRTSRSPSGSRSRSADASPRHGR 280
           GYHDKS   E +D  R NWR+SPGRTSRSPSGSRSRSADASPRHGR
Sbjct: 241 GYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGSRSRSADASPRHGR 286

BLAST of MELO3C023845.jh1 vs. ExPASy TrEMBL
Match: A0A6J1CBL6 (serine/arginine-rich SC35-like splicing factor SCL30 OS=Momordica charantia OX=3673 GN=LOC111010084 PE=4 SV=1)

HSP 1 Score: 493 bits (1269), Expect = 6.57e-175
Identity = 261/286 (91.26%), Postives = 266/286 (93.01%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRP 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQ HGSLLVRNIPMDCRP
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQSHGSLLVRNIPMDCRP 60

Query: 61  EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120
           EELRAPFERFGLVRDVYIPKDYY+GEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV
Sbjct: 61  EELRAPFERFGLVRDVYIPKDYYSGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120

Query: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY 180
           VLAAESRKRPEQMRQRSRRGPSGYGGRRS+YGRSRSRSVSRSRSP HPSGSRSRYRSRSY
Sbjct: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY 180

Query: 181 SPAPRWRGDYSVSPGRRHAEYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGYHD 240
           SPAPRWRGDYSVSP RRHA+YP SPRGAP ERD ERS+Q YSPGYDNAD HD +GNGYHD
Sbjct: 181 SPAPRWRGDYSVSPSRRHADYPRSPRGAPHERDGERSQQAYSPGYDNADGHDHDGNGYHD 240

Query: 241 KSGFEGEDARGNWRSSPGRTS------RSPSGSRSRSADASPRHGR 280
           KS FEG D R NWRSSPGR S      RSPSGSRSRSADASPRHGR
Sbjct: 241 KSAFEGGDVRANWRSSPGRRSSPGRISRSPSGSRSRSADASPRHGR 286

BLAST of MELO3C023845.jh1 vs. ExPASy TrEMBL
Match: A0A6J1JIZ1 (serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucurbita maxima OX=3661 GN=LOC111485002 PE=4 SV=1)

HSP 1 Score: 488 bits (1257), Expect = 4.27e-173
Identity = 262/285 (91.93%), Postives = 267/285 (93.68%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGG---YGRRREQPHGSLLVRNIPMD 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGG   YGRRREQPHGSLLVRNIPMD
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMD 60

Query: 61  CRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 120
           CRPEELRAPFERFGLVRDVYIPKDYYTG+PRGFAFVEFVDPYEASEAQYHMNGKKFAGRE
Sbjct: 61  CRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 120

Query: 121 ITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRS 180
           I VVLAAESRKRPEQMRQRSRRGPS YGGRRS+YGRSRSRSVSRSRSPRHPSGSRSR+RS
Sbjct: 121 IAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRS 180

Query: 181 RSYSPAPRWRGDYSVSPGRRHAEYPESPRGAPRERDVERSRQVYSPGYDNAD--EHDQNG 240
           RSYSPAPRWRGDYSVSP RRHA+YP SPRGA RERD ERSRQVYSPGYDNAD  + D NG
Sbjct: 181 RSYSPAPRWRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNG 240

Query: 241 NGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR 280
           NGYHDK  FEGEDAR NWR SP RTSRSPSGSRSRSADASPRHGR
Sbjct: 241 NGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR 285

BLAST of MELO3C023845.jh1 vs. ExPASy TrEMBL
Match: A0A6J1H0N2 (serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucurbita moschata OX=3662 GN=LOC111458935 PE=4 SV=1)

HSP 1 Score: 485 bits (1249), Expect = 5.89e-172
Identity = 259/282 (91.84%), Postives = 265/282 (93.97%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRP 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGG  GGYGRRREQPHGSLLVRNIPMDCRP
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGG--GGYGRRREQPHGSLLVRNIPMDCRP 60

Query: 61  EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120
           EELRAPFERFGLVRDVYIPKDYYTG+PRGFAFVEFVDPYEASEAQYHMNGKKFAGREI V
Sbjct: 61  EELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAV 120

Query: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY 180
           VLAAESRKRPEQMRQRSRRGPS YGGRRS+YGRSRSRSVSRSRSPRHPSGSRSR+RSRSY
Sbjct: 121 VLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSY 180

Query: 181 SPAPRWRGDYSVSPGRRHAEYPESPRGAPRERDVERSRQVYSPGYDNAD--EHDQNGNGY 240
           SPAPRWRGDYSVSP RRHA+YP SPRGA RERD ER+RQVYSPGYDNAD  + D NGNGY
Sbjct: 181 SPAPRWRGDYSVSPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADGPDVDGNGNGY 240

Query: 241 HDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR 280
           HDK  FEGEDAR NWR SP RTSRSPSGSRSRSADASPRHGR
Sbjct: 241 HDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR 280

BLAST of MELO3C023845.jh1 vs. TAIR 10
Match: AT3G55460.1 (SC35-like splicing factor 30 )

HSP 1 Score: 288.9 bits (738), Expect = 4.4e-78
Identity = 183/287 (63.76%), Postives = 205/287 (71.43%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPM 60
           MRRYSPPY+SPPRRGYGGRGRS    PP RGYGGGGGGGG    RR   HGSLLVRNIP+
Sbjct: 1   MRRYSPPYYSPPRRGYGGRGRSPPPPPPRRGYGGGGGGGG----RRGSSHGSLLVRNIPL 60

Query: 61  DCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGR 120
           DCRPEELR PFERFG VRDVYIP+DYY+G+PRGFAFVEFVD Y+A EAQ  MN + FAGR
Sbjct: 61  DCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFAGR 120

Query: 121 EITVVLAAESRKRPEQMRQRSR-RGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRY 180
           EITVV+A+ESRKRPE+MR ++R R     G R   +GRSRSRS+SRSRSPR PS SRSRY
Sbjct: 121 EITVVVASESRKRPEEMRVKTRTRSREPSGSRDRSHGRSRSRSISRSRSPRRPSDSRSRY 180

Query: 181 RSRSYSPAPRWRGDYSVSPGRRHAEYPESPRGAPRERDVERSRQVYSPGYDN----ADEH 240
           RSRSYSPAPR RG                PRG   E D   SR+ YSPGY+     A + 
Sbjct: 181 RSRSYSPAPRRRGG--------------PPRG---EEDENYSRRSYSPGYEGAAAAAPDR 240

Query: 241 DQNG-NGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPR 278
           D+NG N   +K G+E ED R   R+     SRSPSGSRSRS + SPR
Sbjct: 241 DRNGDNEIREKPGYEAEDRRRGGRA----VSRSPSGSRSRSVEVSPR 262

BLAST of MELO3C023845.jh1 vs. TAIR 10
Match: AT1G55310.2 (SC35-like splicing factor 33 )

HSP 1 Score: 146.4 bits (368), Expect = 3.5e-35
Identity = 107/211 (50.71%), Postives = 131/211 (62.09%), Query Frame = 0

Query: 2   RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPE 61
           R Y+P   SPP RGYG RGRSP  RG  G        GR R+ P  SLLVRN+  DCR E
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPRGRYG--------GRSRDLP-TSLLVRNLRHDCRQE 63

Query: 62  ELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVV 121
           +LR  FE+FG V+D+Y+P+DYYTG+PRGF FV+F+DP +A++A++HM+G    GRE+TVV
Sbjct: 64  DLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVV 123

Query: 122 LAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRS-Y 181
            A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS   Y
Sbjct: 124 FAEENRKKPTEMRARERG-----GGRFRDRRRTPPRYYSRSRSP-PPRRGRSRSRSGDYY 183

Query: 182 SPAPRWRGDYSVSP------GRRHAEYPESP 206
           SP PR     S+SP      GRR   Y  SP
Sbjct: 184 SPPPRRHHPRSISPREERYDGRR--SYSRSP 193

BLAST of MELO3C023845.jh1 vs. TAIR 10
Match: AT1G55310.1 (SC35-like splicing factor 33 )

HSP 1 Score: 141.4 bits (355), Expect = 1.1e-33
Identity = 126/276 (45.65%), Postives = 154/276 (55.80%), Query Frame = 0

Query: 2   RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPE 61
           R Y+P   SPP RGYG RGRSP  RG  G        GR R+ P  SLLVRN+  DCR E
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPRGRYG--------GRSRDLP-TSLLVRNLRHDCRQE 63

Query: 62  ELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVV 121
           +LR  FE+FG V+D+Y+P+DYYTG+PRGF FV+F+DP +A++A++HM+G    GRE+TVV
Sbjct: 64  DLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVV 123

Query: 122 LAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYS 181
            A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS    
Sbjct: 124 FAEENRKKPTEMRARERG-----GGRFRDRRRTPPRYYSRSRSP-PPRRGRSRSRS---- 183

Query: 182 PAPRWRGDYSVSPGRRHAEYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGYHDK 241
                 GDY   P RRH     SPR    ER   R     SP  D +    ++      K
Sbjct: 184 ------GDYYSPPPRRHHPRSISPR---EERYDGRRSYSRSPASDGS--RGRSLTPVRGK 242

Query: 242 SGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPR 278
           S       R +   SP R SRSPS  R+RS   SPR
Sbjct: 244 SRSLSPSPRRSISRSP-RRSRSPSPKRNRS--VSPR 242

BLAST of MELO3C023845.jh1 vs. TAIR 10
Match: AT3G13570.1 (SC35-like splicing factor 30A )

HSP 1 Score: 137.9 bits (346), Expect = 1.3e-32
Identity = 116/282 (41.13%), Postives = 153/282 (54.26%), Query Frame = 0

Query: 2   RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPE 61
           R Y+P   SPP RGYG RGRSP  RG  GG         R      SLLVRN+  DCR E
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPRGRFGGS--------RDSDLPTSLLVRNLRHDCRQE 63

Query: 62  ELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVV 121
           +LR PFE+FG V+D+Y+P+DYYTG+PRGF F++F+DP +A+EA++ M+G    GRE+TVV
Sbjct: 64  DLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVV 123

Query: 122 LAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYS 181
            A E+RK+P +MR R R      GGR + +   R      SRSP    G RSR RSR Y+
Sbjct: 124 FAEENRKKPTEMRTRDR------GGRSNRFQDRRRSPPRYSRSPPPRRGRRSRSRSRGYN 183

Query: 182 PAPRWRGDYSVSPGRRHAEYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGYHDK 241
                       P +RH    +S   +P++R  E+ R      Y  +  H    NG   +
Sbjct: 184 S----------PPAKRH----QSRSVSPQDRRYEKER-----SYSRSPPH----NGSRVR 243

Query: 242 SGFEG---EDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR 281
           SG  G     +R   RS   R +RS +  ++RS    PR  R
Sbjct: 244 SGSPGRVKSHSRSPRRSVSPRKNRSYTPEQARSQSPVPRQSR 244

BLAST of MELO3C023845.jh1 vs. TAIR 10
Match: AT1G55310.3 (SC35-like splicing factor 33 )

HSP 1 Score: 136.0 bits (341), Expect = 4.8e-32
Identity = 127/288 (44.10%), Postives = 156/288 (54.17%), Query Frame = 0

Query: 2   RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPE 61
           R Y+P   SPP RGYG RGRSP  RG  G        GR R+ P  SLLVRN+  DCR E
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPRGRYG--------GRSRDLP-TSLLVRNLRHDCRQE 63

Query: 62  ELRAPFERFGLVRDVYIPKDYYTG------------EPRGFAFVEFVDPYEASEAQYHMN 121
           +LR  FE+FG V+D+Y+P+DYYTG            +PRGF FV+F+DP +A++A++HM+
Sbjct: 64  DLRKSFEQFGPVKDIYLPRDYYTGSHLCTDTCKASRDPRGFGFVQFMDPADAADAKHHMD 123

Query: 122 GKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPS 181
           G    GRE+TVV A E+RK+P +MR R R G S +  RR    R+  R  SRSRSP  P 
Sbjct: 124 GYLLLGRELTVVFAEENRKKPTEMRARERGGGSRFRDRR----RTPPRYYSRSRSP-PPR 183

Query: 182 GSRSRYRSRSYSPAPRWRGDYSVSPGRRHAEYPESPRGAPRERDVERSRQVYSPGYDNAD 241
             RSR RS          GDY   P RRH     SPR    ER   R     SP  D + 
Sbjct: 184 RGRSRSRS----------GDYYSPPPRRHHPRSISPR---EERYDGRRSYSRSPASDGS- 243

Query: 242 EHDQNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPR 278
              ++      KS       R +   SP R SRSPS  R+RS   SPR
Sbjct: 244 -RGRSLTPVRGKSRSLSPSPRRSISRSP-RRSRSPSPKRNRS--VSPR 255

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008461655.11.61e-19299.64PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis melo] >... [more]
XP_038892248.15.68e-18295.05serine/arginine-rich SC35-like splicing factor SCL30 isoform X2 [Benincasa hispi... [more]
XP_038892246.18.63e-18094.06serine/arginine-rich SC35-like splicing factor SCL30 isoform X1 [Benincasa hispi... [more]
XP_022139086.11.36e-17491.26serine/arginine-rich SC35-like splicing factor SCL30 [Momordica charantia][more]
XP_031741884.11.86e-17493.33LOW QUALITY PROTEIN: serine/arginine-rich SC35-like splicing factor SCL30 [Cucum... [more]
Match NameE-valueIdentityDescription
Q8L3X86.2e-7763.76Serine/arginine-rich SC35-like splicing factor SCL30 OS=Arabidopsis thaliana OX=... [more]
Q9SEU41.6e-3245.65Serine/arginine-rich SC35-like splicing factor SCL33 OS=Arabidopsis thaliana OX=... [more]
Q9LHP21.8e-3141.13Serine/arginine-rich SC35-like splicing factor SCL30A OS=Arabidopsis thaliana OX... [more]
Q1PDV29.7e-2239.91Serine/arginine-rich SC35-like splicing factor SCL28 OS=Arabidopsis thaliana OX=... [more]
Q9BRL61.6e-1939.08Serine/arginine-rich splicing factor 8 OS=Homo sapiens OX=9606 GN=SRSF8 PE=1 SV=... [more]
Match NameE-valueIdentityDescription
A0A1S3CFP87.78e-19399.64serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucumis melo OX=3656 GN=... [more]
A0A0A0KNV57.17e-17994.41RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G181460 PE=4 SV... [more]
A0A6J1CBL66.57e-17591.26serine/arginine-rich SC35-like splicing factor SCL30 OS=Momordica charantia OX=3... [more]
A0A6J1JIZ14.27e-17391.93serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucurbita maxima OX=3661... [more]
A0A6J1H0N25.89e-17291.84serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucurbita moschata OX=36... [more]
Match NameE-valueIdentityDescription
AT3G55460.14.4e-7863.76SC35-like splicing factor 30 [more]
AT1G55310.23.5e-3550.71SC35-like splicing factor 33 [more]
AT1G55310.11.1e-3345.65SC35-like splicing factor 33 [more]
AT3G13570.11.3e-3241.13SC35-like splicing factor 30A [more]
AT1G55310.34.8e-3244.10SC35-like splicing factor 33 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 48..121
e-value: 1.7E-21
score: 87.4
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 49..119
e-value: 1.9E-19
score: 69.2
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 47..125
score: 17.932785
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 38..159
e-value: 8.6E-29
score: 102.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..272
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..173
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..280
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..248
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..219
NoneNo IPR availablePANTHERPTHR23147SERINE/ARGININE RICH SPLICING FACTORcoord: 22..276
NoneNo IPR availablePANTHERPTHR23147:SF96OS02G0252100 PROTEINcoord: 22..276
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 43..154

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023845.jh1.t1MELO3C023845.jh1.t1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding