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MELO3C023845.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDSstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.TCCCAAAAATCAGATCAAAGGAAGAGTCTTTCTACGCATTTTCTCCTCTTCATTCTCTTACCTTCAGGTAATTATGAACTTACGATACCTGGATTCACTATTTCGTTTATAGATGTTTATCTAGATTATTCTTGGTCGAACCCTAAACCCATAGTTGTTTACCGCTACTTTCTTTGTTTCGATCATTCCGAATTAGCTGTTTCCCTTCACTCTTAGTTTGAATCATCTCTTTGCGTTTCTTTAGGTCAAGAATTGGGAAAAGAATAGGTGATAAGAGGACCCTTTTTGTCGAACCCTCTTGATTCCCTTTTAATATATATATGGATGTATCTTGTGTGGGTTTATAATCTTCAACATTTTTAACATTTATCGTAGCAGGCAATTGAGAGTTTCAGTGAGACCTGAGCCTATGAAGTGTAGCTTAGGGTTTTAACAGTCAGAACCCCTTTTCAGTTTAGGATCATAAGTGGGTGTCATTGGATTAACTACTATTCTATTTAGGTAGTAATTAGTTTGAATTGGTAGGAAGTTGACAATATGCATCTTAATTGCTGACCTCACCTGATCATTGTTGTGGACAGGTTGAAACATGAGAAGATACAGTCCACCATACCATAGTCCACCAAGAAGAGGGTATGGTGGTCGTGGAAGAAGCCCCCCGGGTAGGGGTTATGGTGGTGGCGGTGGCGGTGGCGGTGGGTATGGAAGGCGAAGGGAACAGCCTCATGGTAGCCTTTTGGTTAGAAATATTCCTATGGATTGCAGGTCAGGATTTCACCACTTTTTTTCAGCTACCTTATTGCTTTGTCCAATTTAGGTTTCAGTACTAACTACTACTTTTCTAATTAATGAATTTATTGTTTTCTTTCACTGCATTTAAAGAACTTGACTTTTGGTTGTAATGGTACATTTAGGCCGGAGGAGCTTAGAGCGCCGTTTGAGAGGTTTGGACTTGTTCGTGATGTGTATATTCCAAAGGACTATTACACAGGGTGAGCATCTTGTGTTTATTTTTCTTATTTGTTATTCATTCCACTCAATCCATGGTATGTGTTGGATTTATCGAGCTGTTATTCTACCTGATTTGCGAACGTGTACTTCTACTTTCCTTGTACTTTCCTTGTGAGTTAGTTTGGTAATGACACATCATTAAGATTTGATCAAATGAACCTCATGCAGGGTTCGGGTGGTAATTTTAGGTTTACTTGTTAAGCATTACGCCAAGCCTTTTGAGTTAGAACTTGTTACTTTCTCTTGTTTGATGCTCTCAGTCGTGTGCTAAGCTTCATATATAGGTCAATCATGATCATATTCATAATATATAGAGCACATTTAAAGCTTTTCTAATTTGCATTTCAAGATTCTATTGTCAGAAAAATGCCTGATTTTCTTTTTCTTCTTTCTGGAAAGAACTCTCAAGTGCCTACATACGCAAGATGAAATAAACTCTTAAGCAACTGTTGGGGGACTCTTTTACAACTACCTTTTAACTTGATCAATTCTTGAGGGTGTAATATGTGCACTGAACTGAGTTCTAATTTTTTTAGACAATTTTTTTAGATTGTATGGAACATCCAGTTGAGTTTGTTATTCATAGTCAGGGAATGAAGAGGATGAACAATGTCAAATGAAATTTCACCGGACCTTATTTTTTCTGGATGGATCTTATTCCCATTTCATAGTGTGTTTTGAACTGCTTTGTCAGGGGGCATATTGGTTAGAACTTTGAAGTTAAAACAAGCCCAAGCCCCTTTTAATGAGGGTCTACTACCTTCCACCGCCTAACATATAGCTCATCAAGAATGAAAAGAATAATATCGAAATGAGGGTGTCTCTCTCTGAGGAGACATTAGATAACCACACCCATCAATAGAAGTTGATAAGGAAGAGGGTTGATTCTTGAGCAATTGAAGCCAACAAGTTGAAGGTTTCATAGTTGTGGAATCTTTGTTCAAGTGCTTCATTTCCAAGCGTTTGAAGAATAGTCACAAATTTTTGGTTTCAAGTAATTATATCAAGAAATGTGAAGTTTATGAGGAGGAAGGTATATTCTTGAGCAATTGAAGCCAACAAGGTGAAGGTTTTAAGGTTGTGGAATGTTTGTTCAAGTGCTTCATGTGTTCCAAGTGTGTGAAGAATTTTCAACTCATGAATTGTTGGTTTACTTATATCAAGAAATATGAAGATTTGTCAAGTCAAGTTACGTTGAATTGAAGTGCTTATAGTTACAAGAATATGAAGATTTTTCAAGTCACTTGCCTCTTTCATGCTTGATTGTAAAGATAAGGTTAGCTACTAAACTTTGAAATTCGCTGTGCTTTATGTAACTCCAGCCCCAGCTTTGATGAAAGCAGTCTGAAGTTAATGCTGGATATGAAAAGAAAGCTATTTAGTTTACGACATCCCAAATCCTTTTAGCCATGAAAATGTATATTAATGTAGTCATTCACCCTTATTACCCAAGATTTGTATCCAGAATGGGTTTCTTATTTTTATCTCTGTTTTTTTTCCTTAAATCTTTTGTAGTGAGCCTCGAGGATTTGCATTTGTGGAGTTTGTTGATCCTTACGAGGCTTCTGAAGCTCAGTACCATATGAATGGGAAAAAATTTGCTGGTAGGGAGATTACTGTGGTCCTTGCTGCAGAGTCGAGGAAGAGGCCAGAACAGATGCGCCAAAGAAGTAGAAGGTAGTTTGTTTATTCTCATTTTCCTCTTTTTCTCAATGGTTTCAGGGAACAGCAAATTTAGTATTCGCCCCCTTGCATCTACTTTCAAGTTTGAGTTGCATGGTTGTTTGCTTGAGCCTTAAAGAAATATACTCATTATTGTTCATCCGGTAAAAAGTCTCAGTTCTTTTCTGTATTGTAACCAAGCTGCAAGCATCTATATCTTATATAATGTTTATTTAGTGGGGTGGGGTGGATCAAAATCAATCTAAAACTCTCAGTTCTTTCCATTCTCTGTATATAGTGGCTAACAGCCTTTTATTAGTTGCAAGTTACATGTTTTTTACTATTCCCTTTTTTCCTCTTTGCAGGGGACCATCTGGCTACGGTGGACGCCGTTCTCATTATGGTATGGGTACAATCAGTCTCTCTTCAAATTTTACTAACCTTATCTTTAAATAGCTTTTTTAGTTAAGTGAAAACCCCAACATAAAAAAGTGAGAAGTCCTCTTATATTCTAATTCTCAATTTCTAGTTCATGGTAAAGTTTTTTAACTGTTCAAGAAGTCTAGCATCATGTATGGTTCTTCCCTCACAATGTTACCTGCAAAGTTTAGTAAAGAGCACATCACAACAATTTCAAGGGCAATGACACCGTTCTATTAGCAGGAATAAGGAAAAGGTTGAAAACACCAGTTAGCTAGAAGTAGAACATATCAGAAACAGAAAGATAGTTAACCAAGAGAGTTGCCCCACCCCACCAAAACCCCGCATAATCAACCTGCCCTTCACAAATAAACCTGGCACACCTCACTAACCCACAAACTAACAGCCAGTGTTCGAATTTCCTGATTTACTTCTAGAATATGTCTTCTTGTGTGTGTGTGTGTGTGGGTGGGTGGGGGGCTCACAGATTACTACTTGTTATGGAACTGTTGGACATTACAGCTTGAAGCAGTAGCATATGGGAATTATTTCTAAGATGCACGTGTATTCTTATTTGACTTTTCTTGAGACCTAAGATTGTTGTATTTATTTGCAAGCTCTCAGTTAAATGGTTTTATATATCATTTAGATGGACTCTTTATTTTATTTTTTGTGCAATGATCTTAGTAGTTTCACATGCAGACAGATGAATTATGGTATTTAAATTGTCCTTTTACTAGAATCATTCTTTCCTTATTTGGTCCTCGGCTCTGAACCTTTTTTTCAACATGCAACTTCTTTTATTAGGTTCAAATATAAACATATAATAATTCCTTTTGGGTTTATTGGGTTCCTTAAGTGAGTGTGTGTGTCTCAACTTAGCATAACGTCAACTCCTTTGTTATGAAATTTTGAGTGTGCAGTTTAATTGCTAAAATTAAAAACGAACCTCTTCTGTAGTCTGTGCATTTATTTGTTTGTGGTATTGTAGGCTTCAATTTCTTACTAAATTTCAAGTGCACATACTTCAGCTTCTTCTAAAAAAATTACACATTCATGCTCGGAATCAAACCAATCCTTAATTATTGTACTGGACAAAATATGGCCATTTTGGATTTTTGTATTCAATGATCAAACCTGGTTTCAGGCAGTAGTTGTTCATTTGATTTGATTTTTTTTTTGTTGGGGTTCATATAGGACGTTCAAGATCTCGTTCAGTATCCAGATCACGCTCCCCTCGCCATCCTTCGGGTTCAAGAAGTAGATACCGATCAAGGTAATCTTCTATTTAAAACACCTGGTTCACATTTATTAATGCTCCAGATAGTTGTAAATATGCCATAAGAGAAATTGTCAGGTCTTACTCTCCAGCTCCGAGGTGGCGAGGCGACTATTCTGTTTCCCCTGGTAGAAGGCACGCAGAGTACCCTGAATCACCTAGAGGTGCTCCTCGTGAGCGAGATGTTGAGAGGAGCCGACAAGTATATTCTCCTGGTTATGATAATGCTGATGAGCACGATCAGAATGGAAATGGATATCATGAGTAAGTTGTATGATTTACTGATGAATTTTGAGTACCTGCCTGACTGTGTGGTTCCTTTCATGTTCTTGTTGGCAACATGACATTTTCCCATAATTTCAGCCATTTTGCAATTTTGACTTCATTGCTTTTCTGGCAGCACCTTGAACATGAGACTATTTTTGGTGTTTTTCATTTTTTTTAAATCATATACTTCATCATATTTGTTTACTGTGCTCGTTTAGAAATATGTTCTATTCGGTTTTATTTATACGTCGATCCATTTTCGCTTCTTTTAGCAAGTCTGGATTTGAAGGGGAGGATGCACGAGGTAATTGGAGGTCGTCTCCTGGTAGAACATCAAGATCCCCATCGGGGTCCCGATCCCGCTCTGCTGATGCGTCCCCCAGACACGGTAGATGATTTTTCTTTGAGAAAATATGACAGTAGATGATGTAAACCATCTTTTCTAATATAAAACATTTGTTATTATCCACTATCCAGGAGAAGTTTTTAGATTGTATTTTGTAAGATGTTCTTGGGCGTGTTGGGATTTTCTAGACCGGGGAATCTTATTTGCTCTCATTTGAAGTTTAAAAAATATTATGCTACTTTTCTGGATA TCCCAAAAATCAGATCAAAGGAAGAGTCTTTCTACGCATTTTCTCCTCTTCATTCTCTTACCTTCAGGTTGAAACATGAGAAGATACAGTCCACCATACCATAGTCCACCAAGAAGAGGGTATGGTGGTCGTGGAAGAAGCCCCCCGGGTAGGGGTTATGGTGGTGGCGGTGGCGGTGGCGGTGGGTATGGAAGGCGAAGGGAACAGCCTCATGGTAGCCTTTTGGTTAGAAATATTCCTATGGATTGCAGGCCGGAGGAGCTTAGAGCGCCGTTTGAGAGGTTTGGACTTGTTCGTGATGTGTATATTCCAAAGGACTATTACACAGGTGAGCCTCGAGGATTTGCATTTGTGGAGTTTGTTGATCCTTACGAGGCTTCTGAAGCTCAGTACCATATGAATGGGAAAAAATTTGCTGGTAGGGAGATTACTGTGGTCCTTGCTGCAGAGTCGAGGAAGAGGCCAGAACAGATGCGCCAAAGAAGTAGAAGGGGACCATCTGGCTACGGTGGACGCCGTTCTCATTATGGACGTTCAAGATCTCGTTCAGTATCCAGATCACGCTCCCCTCGCCATCCTTCGGGTTCAAGAAGTAGATACCGATCAAGGTCTTACTCTCCAGCTCCGAGGTGGCGAGGCGACTATTCTGTTTCCCCTGGTAGAAGGCACGCAGAGTACCCTGAATCACCTAGAGGTGCTCCTCGTGAGCGAGATGTTGAGAGGAGCCGACAAGTATATTCTCCTGGTTATGATAATGCTGATGAGCACGATCAGAATGGAAATGGATATCATGACAAGTCTGGATTTGAAGGGGAGGATGCACGAGGTAATTGGAGGTCGTCTCCTGGTAGAACATCAAGATCCCCATCGGGGTCCCGATCCCGCTCTGCTGATGCGTCCCCCAGACACGGTAGATGATTTTTCTTTGAGAAAATATGACAGTAGATGATGTAAACCATCTTTTCTAATATAAAACATTTGTTATTATCCACTATCCAGGAGAAGTTTTTAGATTGTATTTTGTAAGATGTTCTTGGGCGTGTTGGGATTTTCTAGACCGGGGAATCTTATTTGCTCTCATTTGAAGTTTAAAAAATATTATGCTACTTTTCTGGATA ATGAGAAGATACAGTCCACCATACCATAGTCCACCAAGAAGAGGGTATGGTGGTCGTGGAAGAAGCCCCCCGGGTAGGGGTTATGGTGGTGGCGGTGGCGGTGGCGGTGGGTATGGAAGGCGAAGGGAACAGCCTCATGGTAGCCTTTTGGTTAGAAATATTCCTATGGATTGCAGGCCGGAGGAGCTTAGAGCGCCGTTTGAGAGGTTTGGACTTGTTCGTGATGTGTATATTCCAAAGGACTATTACACAGGTGAGCCTCGAGGATTTGCATTTGTGGAGTTTGTTGATCCTTACGAGGCTTCTGAAGCTCAGTACCATATGAATGGGAAAAAATTTGCTGGTAGGGAGATTACTGTGGTCCTTGCTGCAGAGTCGAGGAAGAGGCCAGAACAGATGCGCCAAAGAAGTAGAAGGGGACCATCTGGCTACGGTGGACGCCGTTCTCATTATGGACGTTCAAGATCTCGTTCAGTATCCAGATCACGCTCCCCTCGCCATCCTTCGGGTTCAAGAAGTAGATACCGATCAAGGTCTTACTCTCCAGCTCCGAGGTGGCGAGGCGACTATTCTGTTTCCCCTGGTAGAAGGCACGCAGAGTACCCTGAATCACCTAGAGGTGCTCCTCGTGAGCGAGATGTTGAGAGGAGCCGACAAGTATATTCTCCTGGTTATGATAATGCTGATGAGCACGATCAGAATGGAAATGGATATCATGACAAGTCTGGATTTGAAGGGGAGGATGCACGAGGTAATTGGAGGTCGTCTCCTGGTAGAACATCAAGATCCCCATCGGGGTCCCGATCCCGCTCTGCTGATGCGTCCCCCAGACACGGTAGATGA MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHAEYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR Homology
BLAST of MELO3C023845.jh1 vs. NCBI nr
Match: XP_008461655.1 (PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis melo] >XP_008461656.1 PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis melo] >XP_008461657.1 PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis melo]) HSP 1 Score: 538 bits (1386), Expect = 1.61e-192 Identity = 279/280 (99.64%), Postives = 280/280 (100.00%), Query Frame = 0
BLAST of MELO3C023845.jh1 vs. NCBI nr
Match: XP_038892248.1 (serine/arginine-rich SC35-like splicing factor SCL30 isoform X2 [Benincasa hispida]) HSP 1 Score: 511 bits (1317), Expect = 5.68e-182 Identity = 269/283 (95.05%), Postives = 274/283 (96.82%), Query Frame = 0
BLAST of MELO3C023845.jh1 vs. NCBI nr
Match: XP_038892246.1 (serine/arginine-rich SC35-like splicing factor SCL30 isoform X1 [Benincasa hispida] >XP_038892247.1 serine/arginine-rich SC35-like splicing factor SCL30 isoform X1 [Benincasa hispida]) HSP 1 Score: 506 bits (1303), Expect = 8.63e-180 Identity = 269/286 (94.06%), Postives = 274/286 (95.80%), Query Frame = 0
BLAST of MELO3C023845.jh1 vs. NCBI nr
Match: XP_022139086.1 (serine/arginine-rich SC35-like splicing factor SCL30 [Momordica charantia]) HSP 1 Score: 493 bits (1269), Expect = 1.36e-174 Identity = 261/286 (91.26%), Postives = 266/286 (93.01%), Query Frame = 0
BLAST of MELO3C023845.jh1 vs. NCBI nr
Match: XP_031741884.1 (LOW QUALITY PROTEIN: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis sativus]) HSP 1 Score: 493 bits (1268), Expect = 1.86e-174 Identity = 266/285 (93.33%), Postives = 269/285 (94.39%), Query Frame = 0
BLAST of MELO3C023845.jh1 vs. ExPASy Swiss-Prot
Match: Q8L3X8 (Serine/arginine-rich SC35-like splicing factor SCL30 OS=Arabidopsis thaliana OX=3702 GN=SCL30 PE=1 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 6.2e-77 Identity = 183/287 (63.76%), Postives = 205/287 (71.43%), Query Frame = 0
BLAST of MELO3C023845.jh1 vs. ExPASy Swiss-Prot
Match: Q9SEU4 (Serine/arginine-rich SC35-like splicing factor SCL33 OS=Arabidopsis thaliana OX=3702 GN=SCL33 PE=1 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 1.6e-32 Identity = 126/276 (45.65%), Postives = 154/276 (55.80%), Query Frame = 0
BLAST of MELO3C023845.jh1 vs. ExPASy Swiss-Prot
Match: Q9LHP2 (Serine/arginine-rich SC35-like splicing factor SCL30A OS=Arabidopsis thaliana OX=3702 GN=SCL30A PE=1 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.8e-31 Identity = 116/282 (41.13%), Postives = 153/282 (54.26%), Query Frame = 0
BLAST of MELO3C023845.jh1 vs. ExPASy Swiss-Prot
Match: Q1PDV2 (Serine/arginine-rich SC35-like splicing factor SCL28 OS=Arabidopsis thaliana OX=3702 GN=SCL28 PE=1 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 9.7e-22 Identity = 91/228 (39.91%), Postives = 116/228 (50.88%), Query Frame = 0
BLAST of MELO3C023845.jh1 vs. ExPASy Swiss-Prot
Match: Q9BRL6 (Serine/arginine-rich splicing factor 8 OS=Homo sapiens OX=9606 GN=SRSF8 PE=1 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.6e-19 Identity = 93/238 (39.08%), Postives = 119/238 (50.00%), Query Frame = 0
BLAST of MELO3C023845.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CFP8 (serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucumis melo OX=3656 GN=LOC103500205 PE=4 SV=1) HSP 1 Score: 538 bits (1386), Expect = 7.78e-193 Identity = 279/280 (99.64%), Postives = 280/280 (100.00%), Query Frame = 0
BLAST of MELO3C023845.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KNV5 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G181460 PE=4 SV=1) HSP 1 Score: 503 bits (1295), Expect = 7.17e-179 Identity = 270/286 (94.41%), Postives = 273/286 (95.45%), Query Frame = 0
BLAST of MELO3C023845.jh1 vs. ExPASy TrEMBL
Match: A0A6J1CBL6 (serine/arginine-rich SC35-like splicing factor SCL30 OS=Momordica charantia OX=3673 GN=LOC111010084 PE=4 SV=1) HSP 1 Score: 493 bits (1269), Expect = 6.57e-175 Identity = 261/286 (91.26%), Postives = 266/286 (93.01%), Query Frame = 0
BLAST of MELO3C023845.jh1 vs. ExPASy TrEMBL
Match: A0A6J1JIZ1 (serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucurbita maxima OX=3661 GN=LOC111485002 PE=4 SV=1) HSP 1 Score: 488 bits (1257), Expect = 4.27e-173 Identity = 262/285 (91.93%), Postives = 267/285 (93.68%), Query Frame = 0
BLAST of MELO3C023845.jh1 vs. ExPASy TrEMBL
Match: A0A6J1H0N2 (serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucurbita moschata OX=3662 GN=LOC111458935 PE=4 SV=1) HSP 1 Score: 485 bits (1249), Expect = 5.89e-172 Identity = 259/282 (91.84%), Postives = 265/282 (93.97%), Query Frame = 0
BLAST of MELO3C023845.jh1 vs. TAIR 10
Match: AT3G55460.1 (SC35-like splicing factor 30 ) HSP 1 Score: 288.9 bits (738), Expect = 4.4e-78 Identity = 183/287 (63.76%), Postives = 205/287 (71.43%), Query Frame = 0
BLAST of MELO3C023845.jh1 vs. TAIR 10
Match: AT1G55310.2 (SC35-like splicing factor 33 ) HSP 1 Score: 146.4 bits (368), Expect = 3.5e-35 Identity = 107/211 (50.71%), Postives = 131/211 (62.09%), Query Frame = 0
BLAST of MELO3C023845.jh1 vs. TAIR 10
Match: AT1G55310.1 (SC35-like splicing factor 33 ) HSP 1 Score: 141.4 bits (355), Expect = 1.1e-33 Identity = 126/276 (45.65%), Postives = 154/276 (55.80%), Query Frame = 0
BLAST of MELO3C023845.jh1 vs. TAIR 10
Match: AT3G13570.1 (SC35-like splicing factor 30A ) HSP 1 Score: 137.9 bits (346), Expect = 1.3e-32 Identity = 116/282 (41.13%), Postives = 153/282 (54.26%), Query Frame = 0
BLAST of MELO3C023845.jh1 vs. TAIR 10
Match: AT1G55310.3 (SC35-like splicing factor 33 ) HSP 1 Score: 136.0 bits (341), Expect = 4.8e-32 Identity = 127/288 (44.10%), Postives = 156/288 (54.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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