MELO3C023798 (gene) Melon (DHL92) v4

Overview
NameMELO3C023798
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr06: 18497192 .. 18497428 (-)
RNA-Seq ExpressionMELO3C023798
SyntenyMELO3C023798
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCGAGATAATCCTACAACCAATACTTATTTCCCGCGACAAGAGGAAACTCCTTAATCTCTTACTGCAAACCTGCTTGATCCATCCACAACCAAAGCGCCCAGCTTTTGATGATCCCCAAACTAACCAAAGGGATGATTCATTTCAGAATTTATTCCAAGATTCCATTTTTGACCCCTCAGCCTTCATGGATGATGTGCTTAAGGAGTCAGAAGACGTGACACTGAGCCCTATG

mRNA sequence

ATGGGCGAGATAATCCTACAACCAATACTTATTTCCCGCGACAAGAGGAAACTCCTTAATCTCTTACTGCAAACCTGCTTGATCCATCCACAACCAAAGCGCCCAGCTTTTGATGATCCCCAAACTAACCAAAGGGATGATTCATTTCAGAATTTATTCCAAGATTCCATTTTTGACCCCTCAGCCTTCATGGATGATGTGCTTAAGGAGTCAGAAGACGTGACACTGAGCCCTATG

Coding sequence (CDS)

ATGGGCGAGATAATCCTACAACCAATACTTATTTCCCGCGACAAGAGGAAACTCCTTAATCTCTTACTGCAAACCTGCTTGATCCATCCACAACCAAAGCGCCCAGCTTTTGATGATCCCCAAACTAACCAAAGGGATGATTCATTTCAGAATTTATTCCAAGATTCCATTTTTGACCCCTCAGCCTTCATGGATGATGTGCTTAAGGAGTCAGAAGACGTGACACTGAGCCCTATG

Protein sequence

MGEIILQPILISRDKRKLLNLLLQTCLIHPQPKRPAFDDPQTNQRDDSFQNLFQDSIFDPSAFMDDVLKESEDVTLSPM
Homology
BLAST of MELO3C023798 vs. NCBI nr
Match: KAA0063397.1 (hypothetical protein E6C27_scaffold508G00290 [Cucumis melo var. makuwa] >TYK11655.1 hypothetical protein E5676_scaffold828G00250 [Cucumis melo var. makuwa])

HSP 1 Score: 147.1 bits (370), Expect = 6.3e-32
Identity = 74/79 (93.67%), Postives = 76/79 (96.20%), Query Frame = 0

Query: 1   MGEIILQPILISRDKRKLLNLLLQTCLIHPQPKRPAFDDPQTNQRDDSFQNLFQDSIFDP 60
           MGEIILQPIL+SRDKR+LLNLLLQTCLIHPQPK  AFDDPQTNQ DDSFQNLFQDSIFDP
Sbjct: 63  MGEIILQPILLSRDKRELLNLLLQTCLIHPQPKCQAFDDPQTNQGDDSFQNLFQDSIFDP 122

Query: 61  SAFMDDVLKESEDVTLSPM 80
           SAFMDDVLKESEDVTLSPM
Sbjct: 123 SAFMDDVLKESEDVTLSPM 141

BLAST of MELO3C023798 vs. NCBI nr
Match: TYK18699.1 (hypothetical protein E5676_scaffold481G00470 [Cucumis melo var. makuwa])

HSP 1 Score: 57.4 bits (137), Expect = 6.5e-05
Identity = 27/58 (46.55%), Postives = 41/58 (70.69%), Query Frame = 0

Query: 22  LLQTCLIHPQPKRPAFDDPQTNQRDDSFQNLFQDSIFDPSAFMDDVLKESEDVTLSPM 80
           L+ T L     ++P+ D+PQT+Q DDSFQ+LFQDSI +P AF+ D  K S+++  +P+
Sbjct: 184 LIVTLLDPTSKEKPSLDNPQTDQEDDSFQDLFQDSICNPLAFIGDAFKASDNIAQTPV 241

BLAST of MELO3C023798 vs. NCBI nr
Match: KAA0060836.1 (hypothetical protein E6C27_scaffold137G00650 [Cucumis melo var. makuwa])

HSP 1 Score: 54.7 bits (130), Expect = 4.2e-04
Identity = 27/52 (51.92%), Postives = 37/52 (71.15%), Query Frame = 0

Query: 22  LLQTCLIHPQPKRPAFDDPQTNQRDDSFQNLFQDSIFDPSAFMDDVLKESED 74
           L+ T L     ++P+ D+PQT+Q DDSFQNLFQDSI +P AF+ D  K S++
Sbjct: 83  LIVTLLDPASKEKPSLDNPQTDQGDDSFQNLFQDSICNPLAFIGDAFKASDN 134

BLAST of MELO3C023798 vs. NCBI nr
Match: TYK27744.1 (hypothetical protein E5676_scaffold225G00970 [Cucumis melo var. makuwa])

HSP 1 Score: 53.9 bits (128), Expect = 7.2e-04
Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 0

Query: 22  LLQTCLIHPQPKRPAFDDPQTNQRDDSFQNLFQDSIFDPSAFMDDVLKESEDVTLSPM 80
           L+   L+    K P+F + Q +Q D+S ++ F+DSI D  AF+DD LKESEDVTLSP+
Sbjct: 79  LVAPLLVPNLTKNPSFANLQIDQGDESNKDFFKDSICDRLAFLDDALKESEDVTLSPV 136

BLAST of MELO3C023798 vs. ExPASy TrEMBL
Match: A0A5A7V8S5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold828G00250 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.0e-32
Identity = 74/79 (93.67%), Postives = 76/79 (96.20%), Query Frame = 0

Query: 1   MGEIILQPILISRDKRKLLNLLLQTCLIHPQPKRPAFDDPQTNQRDDSFQNLFQDSIFDP 60
           MGEIILQPIL+SRDKR+LLNLLLQTCLIHPQPK  AFDDPQTNQ DDSFQNLFQDSIFDP
Sbjct: 63  MGEIILQPILLSRDKRELLNLLLQTCLIHPQPKCQAFDDPQTNQGDDSFQNLFQDSIFDP 122

Query: 61  SAFMDDVLKESEDVTLSPM 80
           SAFMDDVLKESEDVTLSPM
Sbjct: 123 SAFMDDVLKESEDVTLSPM 141

BLAST of MELO3C023798 vs. ExPASy TrEMBL
Match: A0A5D3D581 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold481G00470 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.2e-05
Identity = 27/58 (46.55%), Postives = 41/58 (70.69%), Query Frame = 0

Query: 22  LLQTCLIHPQPKRPAFDDPQTNQRDDSFQNLFQDSIFDPSAFMDDVLKESEDVTLSPM 80
           L+ T L     ++P+ D+PQT+Q DDSFQ+LFQDSI +P AF+ D  K S+++  +P+
Sbjct: 184 LIVTLLDPTSKEKPSLDNPQTDQEDDSFQDLFQDSICNPLAFIGDAFKASDNIAQTPV 241

BLAST of MELO3C023798 vs. ExPASy TrEMBL
Match: A0A5A7V2V0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00650 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.1e-04
Identity = 27/52 (51.92%), Postives = 37/52 (71.15%), Query Frame = 0

Query: 22  LLQTCLIHPQPKRPAFDDPQTNQRDDSFQNLFQDSIFDPSAFMDDVLKESED 74
           L+ T L     ++P+ D+PQT+Q DDSFQNLFQDSI +P AF+ D  K S++
Sbjct: 83  LIVTLLDPASKEKPSLDNPQTDQGDDSFQNLFQDSICNPLAFIGDAFKASDN 134

BLAST of MELO3C023798 vs. ExPASy TrEMBL
Match: A0A5D3DW66 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00970 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.5e-04
Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 0

Query: 22  LLQTCLIHPQPKRPAFDDPQTNQRDDSFQNLFQDSIFDPSAFMDDVLKESEDVTLSPM 80
           L+   L+    K P+F + Q +Q D+S ++ F+DSI D  AF+DD LKESEDVTLSP+
Sbjct: 79  LVAPLLVPNLTKNPSFANLQIDQGDESNKDFFKDSICDRLAFLDDALKESEDVTLSPV 136

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0063397.16.3e-3293.67hypothetical protein E6C27_scaffold508G00290 [Cucumis melo var. makuwa] >TYK1165... [more]
TYK18699.16.5e-0546.55hypothetical protein E5676_scaffold481G00470 [Cucumis melo var. makuwa][more]
KAA0060836.14.2e-0451.92hypothetical protein E6C27_scaffold137G00650 [Cucumis melo var. makuwa][more]
TYK27744.17.2e-0450.00hypothetical protein E5676_scaffold225G00970 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7V8S53.0e-3293.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3D5813.2e-0546.55Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V2V02.1e-0451.92Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3DW663.5e-0450.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023798.1MELO3C023798.1mRNA