MELO3C023786 (gene) Melon (DHL92) v4

Overview


Name	MELO3C023786
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	conserved peptide upstream open reading frame 9
Location	chr06: 18244731 .. 18246107 (+)
RNA-Seq Expression	MELO3C023786
Synteny	MELO3C023786

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGGATTTCTCGTGCTTCGTTCTCAGCCGCTAGCTCAATTAATCGGTAAGATTCTTCTTCTTTCTTCGTTTTTGATCTTAGGGTTAATGGTTATCGATTCCTTTTGTTGATCTTTCTGGAACTCCGACTTCTGGCTTTTTTCCTGATTTCGATTTGGTTTTGTTAATAGGATTTGACTGGAGAAAGAGTACAAAGGAAAAAGTGTTTCTCGGTGTTAACTGGTTCACCGATTTTTTGCATTTTGTATTTATTGGTACGTTCTCCCTTTCTCTCTCGGGATATTGAGTTGATGTTTGATCAAGATGATTCTCTCTGACTTGGGTCTTGGATTTGTGGGATTGTGATTGATTTAGTTTTGCAGTTCTTTTTTTTAATCTGTAATAGTATGTATTTTCGTTCTTGATTTCTGTTTGAACCCAGGATTTCCAGATTAGAATTATTTTCTTCATATCGATTACGGTATGTCGATATTTATCCGAATGGTTTATCAATTTGAGGAAATCTTGGAAGGGAATCGTTCGTTTTTATTTGTATAAAACATTGGGTTTCTAGGGCAACATGTTCTCTTTATCAGCCTAGTTGTATGTATTGATGGTTGATTGCATGGCGAAGATAACGAGGGGGTTAGCGTATTAAAGAAGGGTTCACTTTTTTGAATATGGAAACAAGGGTTTTTGTTTTACTTTTGTAATAATAGAGCAATAATAGGAAAGAGGATCATTTGATTTTCCTTCACGGGTTTTGTTGCATGTTTTGCTTTAATCTGTTTGCTTTTTCATAAAGCGTTATTTCATGATTGCAGATCTGTATCCTCAATTATTATTATTATTATTATTATTATTATTATATAATTTTTTACTTCGTTAGGATAACATTTTGTATGAAATCTATGTTTGTCCTTTGCCCCTTGACTCCTCCATTTCGTTTGCTTTTTGTATTTTCATATTGTTCTTCGATTAGATTCACTTTTGTCAGATTGAGTTTTTTTAATCTTTCTCCTAAGGCTCTCATGTTAAGGAAACAGACGCCCGTCTATGAATTTTGGTGGTGTGTGTATTATATCCTGTTGAAGGTTGGGACTTATCATCTTGGGATGTTATATCTATTTTTGCAGCGAATGATTTAATGGAGTCAAAAGGTGGTAAGAAGAAGTCTAGTAGTAGTAGTAGTAAATCCCTTTTCTACGAAGCTCCCCTCGGATACAGCATTGAAGACGTCCGACCACACGGTGGAATCAAGAAGTTCAGATCTGCTGCTTACTCCAACGTATGTTCCTACTTCTTATACCATCAACTTTGTTGTAGCATATCATTGATGTGTTGGCTAATGACTAATCTCTTGTTTCTTCTTCTGCAGTGCGTTCGAAAGCCATCCTGA

mRNA sequence

AGGGATTTCTCGTGCTTCGTTCTCAGCCGCTAGCTCAATTAATCGCGAATGATTTAATGGAGTCAAAAGGTGGTAAGAAGAAGTCTAGTAGTAGTAGTAGTAAATCCCTTTTCTACGAAGCTCCCCTCGGATACAGCATTGAAGACGTCCGACCACACGGTGGAATCAAGAAGTTCAGATCTGCTGCTTACTCCAACTGCGTTCGAAAGCCATCCTGA

Coding sequence (CDS)

ATGGAGTCAAAAGGTGGTAAGAAGAAGTCTAGTAGTAGTAGTAGTAAATCCCTTTTCTACGAAGCTCCCCTCGGATACAGCATTGAAGACGTCCGACCACACGGTGGAATCAAGAAGTTCAGATCTGCTGCTTACTCCAACTGCGTTCGAAAGCCATCCTGA

Protein sequence

MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS

Homology

[Close]

BLAST of MELO3C023786 vs. NCBI nr
Match: KAG7017910.1 (hypothetical protein SDJN02_19776, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 106.7 bits (265), Expect = 6.3e-20
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1   MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS 54
           MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
Sbjct: 101 MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS 153

[Close]

BLAST of MELO3C023786 vs. NCBI nr
Match: KAG6581173.1 (hypothetical protein SDJN03_21175, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 106.7 bits (265), Expect = 6.3e-20
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1   MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS 54
           MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
Sbjct: 71  MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS 123

[Close]

BLAST of MELO3C023786 vs. NCBI nr
Match: XP_016902719.1 (PREDICTED: uncharacterized protein LOC107990274 [Cucumis melo])

HSP 1 Score: 106.7 bits (265), Expect = 6.3e-20
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS 54
          MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
Sbjct: 1  MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS 53

[Close]

BLAST of MELO3C023786 vs. NCBI nr
Match: KRH75225.1 (hypothetical protein GLYMA_01G071400v4 [Glycine max])

HSP 1 Score: 102.4 bits (254), Expect = 1.2e-18
Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS 54
          MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRP+GGIKKFRSAAYSNC RKPS
Sbjct: 1  MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPNGGIKKFRSAAYSNCARKPS 53

[Close]

BLAST of MELO3C023786 vs. NCBI nr
Match: RZC28874.1 (hypothetical protein D0Y65_000731 [Glycine soja] >RZC28875.1 hypothetical protein D0Y65_000731 [Glycine soja])

HSP 1 Score: 102.4 bits (254), Expect = 1.2e-18
Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1   MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS 54
           MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRP+GGIKKFRSAAYSNC RKPS
Sbjct: 90  MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPNGGIKKFRSAAYSNCARKPS 142

[Close]

BLAST of MELO3C023786 vs. ExPASy TrEMBL
Match: A0A1S4E3B1 (uncharacterized protein LOC107990274 OS=Cucumis melo OX=3656 GN=LOC107990274 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.1e-20
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS 54
          MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
Sbjct: 1  MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS 53

[Close]

BLAST of MELO3C023786 vs. ExPASy TrEMBL
Match: A0A445LZX9 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_000731 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.8e-19
Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1   MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS 54
           MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRP+GGIKKFRSAAYSNC RKPS
Sbjct: 90  MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPNGGIKKFRSAAYSNCARKPS 142

[Close]

BLAST of MELO3C023786 vs. ExPASy TrEMBL
Match: I1J697 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_01G071400 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.8e-19
Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS 54
          MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRP+GGIKKFRSAAYSNC RKPS
Sbjct: 1  MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPNGGIKKFRSAAYSNCARKPS 53

[Close]

BLAST of MELO3C023786 vs. ExPASy TrEMBL
Match: Q3ZM65 (Putative SAMDC uORF OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G044300g PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 7.5e-19
Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS 54
          MESKGGKKKSSSSSSKSLFYEAPLGYSIED+RP+GGIKKFRSAAYSNC RKPS
Sbjct: 1  MESKGGKKKSSSSSSKSLFYEAPLGYSIEDIRPNGGIKKFRSAAYSNCARKPS 53

[Close]

BLAST of MELO3C023786 vs. ExPASy TrEMBL
Match: A0A0A0LAP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G271350 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 7.5e-19
Identity = 53/54 (98.15%), Postives = 53/54 (98.15%), Query Frame = 0


Query: 1  MESKGGKKK-SSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS 54
          MESKGGKKK SSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
Sbjct: 39 MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS 92

[Close]

BLAST of MELO3C023786 vs. TAIR 10
Match: AT3G02468.1 (conserved peptide upstream open reading frame 9 )

HSP 1 Score: 87.4 bits (215), Expect = 3.7e-18
Identity = 44/53 (83.02%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 1  MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS 54
          MESKGGKKKSSSSS  SLFYEAPLGYSIEDVRP+GGIKKF+S+ YSNC ++PS
Sbjct: 2  MESKGGKKKSSSSS--SLFYEAPLGYSIEDVRPNGGIKKFKSSVYSNCSKRPS 52

[Close]

BLAST of MELO3C023786 vs. TAIR 10
Match: AT3G25572.1 (conserved peptide upstream open reading frame 11 )

HSP 1 Score: 83.2 bits (204), Expect = 7.0e-17
Identity = 44/54 (81.48%), Postives = 49/54 (90.74%), Query Frame = 0


Query: 1  MESKGGKKKSSSSSSK-SLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS 54
          ME+KGGKKKSS+SSS+ SLF+EAPL YSIEDVRP+GGIKKFRSAAYSN   KPS
Sbjct: 1  METKGGKKKSSNSSSRDSLFFEAPLRYSIEDVRPNGGIKKFRSAAYSNITGKPS 54

[Close]

BLAST of MELO3C023786 vs. TAIR 10
Match: AT5G15948.1 (conserved peptide upstream open reading frame 10 )

HSP 1 Score: 79.0 bits (193), Expect = 1.3e-15
Identity = 40/53 (75.47%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 1  MESKGGKKKSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS 54
          MESK G KKSSS+S  SL YEAPLGYSIEDVRP GGIKKF+S+ YSNC ++PS
Sbjct: 1  MESKAGNKKSSSNS--SLCYEAPLGYSIEDVRPFGGIKKFKSSVYSNCAKRPS 51

The following BLAST results are available for this feature:

BLAST of MELO3C023786 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7017910.1	6.3e-20	100.00	hypothetical protein SDJN02_19776, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6581173.1	6.3e-20	100.00	hypothetical protein SDJN03_21175, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_016902719.1	6.3e-20	100.00	PREDICTED: uncharacterized protein LOC107990274 [Cucumis melo]	[more]
KRH75225.1	1.2e-18	96.23	hypothetical protein GLYMA_01G071400v4 [Glycine max]	[more]
RZC28874.1	1.2e-18	96.23	hypothetical protein D0Y65_000731 [Glycine soja] >RZC28875.1 hypothetical protei...	[more]

BLAST of MELO3C023786 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C023786 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E3B1	3.1e-20	100.00	uncharacterized protein LOC107990274 OS=Cucumis melo OX=3656 GN=LOC107990274 PE=...	[more]
A0A445LZX9	5.8e-19	96.23	Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_000731 PE=4 SV=1	[more]
I1J697	5.8e-19	96.23	Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_01G071400 PE=4 SV=1	[more]
Q3ZM65	7.5e-19	94.34	Putative SAMDC uORF OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G044300g PE=2 SV=1	[more]
A0A0A0LAP2	7.5e-19	98.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G271350 PE=4 SV=1	[more]

BLAST of MELO3C023786 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02468.1	3.7e-18	83.02	conserved peptide upstream open reading frame 9	[more]
AT3G25572.1	7.0e-17	81.48	conserved peptide upstream open reading frame 11	[more]
AT5G15948.1	1.3e-15	75.47	conserved peptide upstream open reading frame 10	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012511	S-adenosyl-l-methionine decarboxylase leader peptide	PFAM	PF08132	AdoMetDC_leader	coord: 1..53 e-value: 8.6E-35 score: 118.4
None	No IPR available	PANTHER	PTHR35727:SF6	SUBFAMILY NOT NAMED	coord: 1..53
None	No IPR available	PANTHER	PTHR35727	BNAA05G33520D PROTEIN	coord: 1..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C023786.1	MELO3C023786.1	mRNA