MELO3C023755 (gene) Melon (DHL92) v4

Overview
NameMELO3C023755
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionNADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H
Locationchr06: 17256107 .. 17256425 (-)
RNA-Seq ExpressionMELO3C023755
SyntenyMELO3C023755
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAGGATGAGTCCTCTGATCCTAACATCATTTATGAGGAGTTGGATGATGAAGCCTCCTTCTCAAATAAAGATATCTCTGATGCAACTGGCAAGAACCAATCTATTGTGATTTTTGGGTTCGGTCAGGTAATAGAAGCTAAGGAGAGATGCTAATTTCCATCAGTCAAAAGCAGGTATCGCCCCTCATGCTCCCTCAGTCCGCTTACCAAGGATTAGAAAGAGAAGAACTGGAGGCAGAGCTAGTTGGGGTAAAGAGTCGTAAGTGCGGTAGGGGTAAGAGAGGACGTGCTCGTAAGGTTCAAAGAAGGGTATGA

mRNA sequence

ATGGAAAGGATGAGTCCTCTGATCCTAACATCATTTATGAGGAGTTGGATGATGAAGCCTCCTTCTCAAATAAAGATATCTCTGATGCAACTGGCAAGAACCAATCTATTGTGATTTTTGGGTTCGGTCAGGTAATAGAAGCTAAGGAGAGATGCTAATTTCCATCAGTCAAAAGCAGGTATCGCCCCTCATGCTCCCTCAGTCCGCTTACCAAGGATTAGAAAGAGAAGAACTGGAGGCAGAGCTAGTTGGGGTAAAGAGTCGTAAGTGCGGTAGGGGTAAGAGAGGACGTGCTCGTAAGGTTCAAAGAAGGGTATGA

Coding sequence (CDS)

ATGCTAATTTCCATCAGTCAAAAGCAGGTATCGCCCCTCATGCTCCCTCAGTCCGCTTACCAAGGATTAGAAAGAGAAGAACTGGAGGCAGAGCTAGTTGGGGTAAAGAGTCGTAAGTGCGGTAGGGGTAAGAGAGGACGTGCTCGTAAGGTTCAAAGAAGGGTATGA

Protein sequence

MLISISQKQVSPLMLPQSAYQGLEREELEAELVGVKSRKCGRGKRGRARKVQRRV
Homology
BLAST of MELO3C023755 vs. NCBI nr
Match: KAA0048452.1 (hypothetical protein E6C27_scaffold61G00470 [Cucumis melo var. makuwa] >TYK28249.1 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H [Cucumis melo var. makuwa])

HSP 1 Score: 71.6 bits (174), Expect = 2.3e-09
Identity = 38/39 (97.44%), Postives = 38/39 (97.44%), Query Frame = 0

Query: 1  MLISISQKQVSPLMLPQSAYQGLEREELEAELVGVKSRK 40
          MLISISQKQVSP MLPQSAYQGLEREELEAELVGVKSRK
Sbjct: 1  MLISISQKQVSPFMLPQSAYQGLEREELEAELVGVKSRK 39

BLAST of MELO3C023755 vs. NCBI nr
Match: TYK09927.1 (hypothetical protein E5676_scaffold16G00510 [Cucumis melo var. makuwa])

HSP 1 Score: 54.7 bits (130), Expect = 3.0e-04
Identity = 30/41 (73.17%), Postives = 34/41 (82.93%), Query Frame = 0

Query: 14 MLPQSAYQGLEREELEAELVGVKSRKCGRGKRGRARKVQRR 55
          ML QSAYQG+EREELE ELV VKSRK G  +RGRAR +QR+
Sbjct: 1  MLQQSAYQGIEREELELELVRVKSRKRGGSERGRARTIQRK 41

BLAST of MELO3C023755 vs. ExPASy TrEMBL
Match: A0A5D3DY36 (NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00490 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-09
Identity = 38/39 (97.44%), Postives = 38/39 (97.44%), Query Frame = 0

Query: 1  MLISISQKQVSPLMLPQSAYQGLEREELEAELVGVKSRK 40
          MLISISQKQVSP MLPQSAYQGLEREELEAELVGVKSRK
Sbjct: 1  MLISISQKQVSPFMLPQSAYQGLEREELEAELVGVKSRK 39

BLAST of MELO3C023755 vs. ExPASy TrEMBL
Match: A0A5D3CD65 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00510 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.4e-04
Identity = 30/41 (73.17%), Postives = 34/41 (82.93%), Query Frame = 0

Query: 14 MLPQSAYQGLEREELEAELVGVKSRKCGRGKRGRARKVQRR 55
          ML QSAYQG+EREELE ELV VKSRK G  +RGRAR +QR+
Sbjct: 1  MLQQSAYQGIEREELELELVRVKSRKRGGSERGRARTIQRK 41

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0048452.12.3e-0997.44hypothetical protein E6C27_scaffold61G00470 [Cucumis melo var. makuwa] >TYK28249... [more]
TYK09927.13.0e-0473.17hypothetical protein E5676_scaffold16G00510 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DY361.1e-0997.44NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H OS=Cuc... [more]
A0A5D3CD651.4e-0473.17Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023755.1MELO3C023755.1mRNA