MELO3C023697 (gene) Melon (DHL92) v4

Overview


Name	MELO3C023697
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr01: 6360257 .. 6360484 (+)
RNA-Seq Expression	MELO3C023697
Synteny	MELO3C023697

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGACCTCTAATGTGTCTACCATAAGGATGTTGAAGAAGGGCCACCAATGTTCGAAGCAAAACCCTCAACGTTATCCTCATGCTCACGAGGATAGACGTATAGTAGAGGTTGACGCTGGACAGGAGGATAGGTGGAAAATTGAAGTTGATGTTTACCATGAGGATGGGAAGAGGGAGCATCGTCGAGAAGAGAAGGATCAAGGACATCCTTGTAACCTTCCGTAG

mRNA sequence

ATGGGGACCTCTAATGTGTCTACCATAAGGATGTTGAAGAAGGGCCACCAATGTTCGAAGCAAAACCCTCAACGTTATCCTCATGCTCACGAGGATAGACGTATAGTAGAGGTTGACGCTGGACAGGAGGATAGGTGGAAAATTGAAGTTGATGTTTACCATGAGGATGGGAAGAGGGAGCATCGTCGAGAAGAGAAGGATCAAGGACATCCTTGTAACCTTCCGTAG

Coding sequence (CDS)

ATGGGGACCTCTAATGTGTCTACCATAAGGATGTTGAAGAAGGGCCACCAATGTTCGAAGCAAAACCCTCAACGTTATCCTCATGCTCACGAGGATAGACGTATAGTAGAGGTTGACGCTGGACAGGAGGATAGGTGGAAAATTGAAGTTGATGTTTACCATGAGGATGGGAAGAGGGAGCATCGTCGAGAAGAGAAGGATCAAGGACATCCTTGTAACCTTCCGTAG

Protein sequence

MGTSNVSTIRMLKKGHQCSKQNPQRYPHAHEDRRIVEVDAGQEDRWKIEVDVYHEDGKREHRREEKDQGHPCNLP

Homology

[Close]

BLAST of MELO3C023697 vs. NCBI nr
Match: KAA0063473.1 (hypothetical protein E6C27_scaffold977G00610 [Cucumis melo var. makuwa] >TYJ95753.1 hypothetical protein E5676_scaffold110G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 62.8 bits (151), Expect = 1.5e-06
Identity = 32/52 (61.54%), Postives = 42/52 (80.77%), Query Frame = 0


Query: 19 SKQNPQRYPHAHEDRRIVEVDAGQEDRWKIEVDVYHEDGKREHRREEKDQGH 71
          SK  P+ YP+AH+D R+V++DAGQ+D WKIEVDV HEDGKR+   EE+ QG+
Sbjct: 2  SKAKPRDYPYAHKDGRVVKLDAGQKDGWKIEVDVGHEDGKRD-CLEEEHQGY 52

[Close]

BLAST of MELO3C023697 vs. ExPASy TrEMBL
Match: A0A5D3B8X7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G00100 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 7.2e-07
Identity = 32/52 (61.54%), Postives = 42/52 (80.77%), Query Frame = 0


Query: 19 SKQNPQRYPHAHEDRRIVEVDAGQEDRWKIEVDVYHEDGKREHRREEKDQGH 71
          SK  P+ YP+AH+D R+V++DAGQ+D WKIEVDV HEDGKR+   EE+ QG+
Sbjct: 2  SKAKPRDYPYAHKDGRVVKLDAGQKDGWKIEVDVGHEDGKRD-CLEEEHQGY 52

The following BLAST results are available for this feature:

BLAST of MELO3C023697 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0063473.1	1.5e-06	61.54	hypothetical protein E6C27_scaffold977G00610 [Cucumis melo var. makuwa] >TYJ9575...	[more]

BLAST of MELO3C023697 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C023697 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3B8X7	7.2e-07	61.54	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MELO3C023697 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C023697.1	MELO3C023697.1	mRNA