MELO3C023673 (gene) Melon (DHL92) v4

Overview


Name	MELO3C023673
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Ribonuclease P/MRP protein subunit POP5
Location	chr01: 7031771 .. 7038441 (-)
RNA-Seq Expression	MELO3C023673
Synteny	MELO3C023673

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCGCCCAAATATTTTCCTGCGAGCCTTTCACGATTTCTCACCTCTTTTGCTGCGATACTCTCCCTCTCACCACTGCCGTTCTACCGACGACGACACTTTCATCTCTGTCCCTCGTCCTTGTCTCTGTCCGTCGTTTCTATGTTCGTCGTCTCTGTTCGTCGTCGTCTCTACAAGGCAACTCCCCGTCGTCCACATGGGTTTCGCTTAGGGTTCTTCGTCTACCAGCTCGTCTCTTTACTGCTATTAGACACTTGGAAGCTAATGATTCGAGGTTAGTCTTCTTCTTCCTTTCTTCTACAGCGTTTTTATGGTGAGAGCATTGAGTGGAAAATCAGTTTCAGTATATAAACTCTTTTCATCATTTCAAACTCTGAAATATAACTGTTGACCCAAATGATTTATCCACCACATTGTAGATCTTAAGTTCCACATCCTCTTCTGACCTTCGTTTGTTTCCGACGACCTCTGCTGACTATCTCTTTGCATCAACAACAAGGTAAATACCCTCCAACTTCTATGCTCTTAATTTCCTCGGTTTTGTCTCTTAATTTAGGGGTAGGCTTTTTGTCTATAGAAAAGTAGTTGGTGTGAGAGAACTAACTGTCTGCAATAGGCTGGAGTTGGAAAGTCTTAGGGCTCCTTCTTGTTATTAAATATTACTAGTAGTAAGGCGATATCTTACAGAGTCCTTTGGGCGTGACTAGATGAACCTTGTACCTACAGCTATTAATTAACTGGGGATATAGATTCTGGCTTCTGTAACAGCCTTCTTGATTCTTGGAGGATTTTCTTTAACTCGTTGTCTAATGACAATTGGATAGTACTCTTGAACCACAATTATGGATGCACCGGTTTCGTTGGATTGGAGTTGAGTCGAAGTACAAGAATTTGGTCGACCATCTTTGTTTAGACAATTACTCTGTTAGGAGAAACAGTTCAAGTTTGTATGTTCTGTGCCTATTGATGAATTTTCTCCCTAACATTGGAGTCTCCCAGGATGCCGAATTTCAGTTAGTTCCATAGTCATAAATAACTTCTGTTTAAATTTCTTTCTGGGTTTAGTTTAATTTTTATCTTTAGTTTATTACTGTTACTTTTTTTAAGAAACGGTGTCATTCTTTCATTGAATAATAGTGTCAGCAGGGTATTTGACATTAAACTACACAAACAAATTTCAAATGTTGGAGAGCTATTATAGACTCTTTTATATTACAGAATTTGATAAACACAGTTTACAGCCTATAAAAAATTTTATGGTTCAACGACTTCAAACTTATAACTTAACCTAATGTGCATTGTCAATCCATTGACAAAGGCATTGAAGCTTGTTATGCTGGTACTGTGTGTATATAGACTTTACTTCAAGAGTAAGGGTTCAAAGTGATTATAGATTTTAAAATTTAACTACGAAAGGGTTCTTCAAATCCATAATCAATAGAATACCAGAGGAATGTATAAGGATGACTATTAAATAATCCCTCTTTCATCCAGTTTAACAACTATATTTGACTAGAAGAGGACACATTTTGATATTTGGAAACATTTTAAAATTTCCATATCTTGCTTTTCATTGTTGTTTTTCTCCTTGGAAATCTGTCTTACAAAGTGTATGTTAGATTTTGAATCATCATGTTTCGTACAATGAATTTTAAATCCTAGAATTATAATTGTATGTTGTATGATGACTTGCACAGACACATGTACATCTCTAAGCTTTAGCAGAACTTCTGATGCAAGGGGGGCTAAGGAATCTCATATTGACCATTTTTTATATGTGGAAAATTGATTACTCCTACTGACCTTTTTTTTTTGTTGCCTTTGCTAAAGAATCTAGTATATATTCTGTGGACTGTGCATTACATTTTTATTTGTCATTGTGTTCCTTATGGTTGCATGTTTTGACGCAGGCATACGTGTTTGAACTTAACTTGAATACTGGACTGTTTAGAATGACTTCTTAATCACTTTGAAAATCATTCTAAACATTGACTACTTGTTTCTTTAGGAGCTTATGTTTTGGAAATTGGCAAGTCTTATATGTTGGCTAACAGATAGATAGCCTATACTTTTACAAGGATTCGCTTCGAGGCTGTTTATGGGAGTGCTTTACCCACAGTCACAATCACTTCCCAGATCCCACCCAAACGAGTCGTATTTGGAAGTAACTTGATTGTGGAACTTGGAAAAAGCATGTTAGGGGTGCTTTTGGCCCAAACACTTACCCAATAAATACCTATATACATTTTCTTTTTAAAAAAACTGAATACTTTTTATTTAACTGCTTATGTCAGCACTCCTAAATGCATCTTTACTATTTCTCCTTGGTCTGAATCTCATTCTTTATCCTGCATGTTGTCATCCTTTCTTACTATTGCCACGACATTAGTTTTGAAGTTTCAACTTTTGCCTATTGTTTAATCAAATAGCCCTTGGAACCCTTCAATAAGTCTACTTAAGGAGAATAGAAAGAGCCAGCTAGTTATGAACTTTTGATTCTTGCCTAAGTAGTTGCTCATCCTTTTACGTATTGTTTAATCAACAGTTCTGGGGATCCTTTAACGAGTCTAATTCAATTCTATTTTGCTGCTAAGTTATCCTAAGTTCTAGCTGTTTGTGCCGCCATAGATGAGTGGAGAATGCTTGCAAACGACCCCCATCACAAGCAGAAAATATTCTTAGATTTACTGCTTTGACAAGGTTGATTTTTTCATGAATGACTTTCTACACTTTCCTAAGACAATGTCCTACCATTTTCGAAAATGATTTGAAAGCACATATAGCATTTGTGATTTTCAAGTTCTGCACTCTGGTGGAGTAGGCCCTAACACTATAATGCAAAGAAAAGATGTGCTGTTGAATCCCCTGACTTTTATCCACCTCACTTTGCCTTTGATGGTCAATCCTTTTGGGAGTAATGGAAAATATCAATCCACCTTTGATTTGCTCCACATATTTGCAATGTGGAAGTCAATTGCGAGTATTTCATACTATTCAGTACTCGACTCGGTGTTCAAATTGCAATCGAGCAAATCACCATCAATTGTCATTTCAATCCTTGTTTAAATTCATAGCATATCGACATTGATGATTGGTTATACATCAATGAATGAATGATGCACCAAGTCACATGGAATTTTTTTTTCCTTCTAAGTTATAATTTCTTTGTAGGAGCGCTTGCAACTCAGCCTTCATTTCTTTATGACCCCTACATGAAATTATTGTACTATTGCCAATTTAGCTGCTGCAGGGTTACCACTGTCAATGTAAGTTTGATTGCATGCTCCACTTAATAGTCTCTGGGTCTAGTTTAATATGTCTTAAGAATGTAACTTTTTTACATGTATCAAGCTACGAAGTTAAAATAGAACAGGCATCTCCTGTAGAACCTAGGAAACACATTTAAATTTATAGATTAGAGATTCAATATTTGAACATTATTATTTCCTCATTCATTATACTGCAACTTGGATCAAGTTTCACTCTGAAACCTCTTTCCATTTTCAATTTTGTTGATTGATTAAAGCTTATTACATACAGATGATGGTCAAAAGGGTCTGTAGACTGTAAGAAGCTAAAAAACTATCTTTACTATATCTTCTGCATAGGTTGAACATATTTTTCCCATGATAAATCTATGAGCATATTGAAAGAATTGAATATAAAGGTGGTTAGGAATTAGGTGCTTGTGAAATTAGTTGAATCTTCTTTCCCTAAAGTCGAGTCTTCTTTTTGTTAGATTTTGACCTAGGAGTTCTGAAAACCGCATTCTTTTTAAGGATATGTTGAATTTCAGCTATTTTGTAGGTATTATGGATTTAGCAGGATAGAAATATTTGGGAGTTGTGAATAATGCTTAGGCCAAAGTCTTGGTTTCTTACCAAAAAAGCAAAAGAATGGCTTAAGCTGAAGAGGGCAGTTAGCTTTTTTGTTTCTATCTTTTCCTGGTACGAGGAATGACAAGAATGTTCTGCTTCTGTTGAAAGCTTATGTTGGAGATCTTGTATTGTTGATTTTCTTTCCGTTGCTTAACCTATTTATTAATATTTGTGATATGAAAACGCAACTAATTGGAATTAAAAACCCAACTATTTATTAATTTAAAGAATTGAAAATTTACCTGAAATTAGGTGCTTGTGAGATCCAAGTGGAAAGATGCAGCCACAAATATAAAGGTAGTTAGGAATGAGGCATCCAACTATGATCAAAACCCCATAGTTAGCATTCATTCTAAGGTCTATGGATATCAACCAAGAATGATGTTTAGCAAGAAAACTTAGAAAGAATAACAAACAAACCAGTTCACAAAATCTTTTAAAGCCACTGGTATAAAACCAGAAACTTTCTTCTACCAGTGGCATTGTGAACACGAGATTGTATAAACAAACAAATATGTTTTGGCTTACTGTTTTAGTTTGTTATTCAAATAGCTAAAACCTACTGCTTTACTAGTTTACTGTAATTCAAATAGCTTAAACCTACTGCTTTACTAGTTTACTGTTTTGGCTTATTGTTTTAGTTTGTTAGAACTACTTAGTTAGTTACTAAATAACTAACTTTTATTAAGTTTTCCTCAATAAATAAAGATCTCCTCTCACATCGAGAGATAAGATTTTTATTCCTTTTAAATGTTCATGAAAGAATTTGATTGATTTGATAGGGCTGTCCGGATATGCCATATTTTAATTTGGGAATTGTTTCTTGTGGTTGGTGGGGCGTGTGCTAATGTGGCATTGTTGGAGAGAAGGATAACTGAGTGTTGCAGGGTTGAGCAAGGAACCTAGTGATGTATGTGTCCTTATTAGGTTTTGTGTTTTCTTTAGGCTTCAACTTTGATTGTTTTTTTTTTCTTTTTTTAATTATTATATATGTACCATCTTTCTTGATTGGGACTCCTTTTCTTTAGCGGGGTTCCCTTTTTGGAGGTTGGATTTCCGTACTCTTGTATTCTTTCATTTTTCCTCAATGAAAGTGATTGCTTATTTTAGTTATCTTTGACTCACTGCTTTTATTGTGGAAGATTAGTTTTTGAGATTAGATATGTTGCTTTTCCTTTTAGGCATAAGTCGTTACTGAAGTTAGAAGGTACAAAACAATGGTGAGGTTTAAAAACCGATACATGGTGTTTGAAGTTCTCTTGGATCCCAATAAAAACCTTAAAACAGATGATCCTATTATCATTACCCAATATAATGTTTCAAAAGCAATCAAGGATAGTATTCTTCTCAACTTCGGGGAATGTGGTTTTGCTTCCGCACTTGGATCTTTTCAAGGTAGATAAAGCTGCATCTTTGCTAATACTTTCTTCAACTTCCATTTGTGATGACATCATACACAGATATATTTATATGGCTTGCCTTCTTGGTGTTTGTTTAGTTAAGTATGTAAATCCAATCACGAAGTTATGTATTATTAGAGCCTCCAGAGAGGACTACCAGAATGTGTGGGCTGCAATTACTATGGTGAGGAGTATCAGCAATTGTCCCGTTGTATTCAATCTACTGGACCTAAGTGGTAAGTTTGTATTCGATCTAAAGGCTTCTAGAGAAATTGGGTTTAAATTATTGTCTGATCACCTATCTAAGAATTAAGAATTGATATCTTATGAGTTACCATCCCTTATCAATGGCAGCAGCAATCTTTTGGATTAGAAAAGAGAGAATCTAGTAACCATCATGTATGGACATGAGATCAATAACACTAATGTGCAGTAAAAAGTTTAAGAGGAAATGGGTTAAGAAGAAATGGGTTTAAATCATGATGACCAGATCTGAGAATTATTATCAACAACCAAATGTACCTGTCGGTCTAATGGTTGGCTAATACATGTCCCAAGTTACTCAAGAACTCACTAATATACATATATATATTTGGGAAAACATTTAACTAAAAATTCTGGGTGTGTATCTGCACGGCATTCTTTTACATAGTGACGAAAGTTGCAAATGGAAAAAGGCATAGTGACGAAAGTTGCAAATGGTAAAAGGTAATGGAAATTGTAAAAGTAAATTGTCTTCTGCTATACTATTTTCAATTTTGATCACTATGGAATTCTAATAACCAATGAAAGGCGTTGTTTTCAATAAAAAAAATAATAATAACCAGCTTTTTTGGTTTTGTATACATTATGATAGGACCCTAATGTCCTATTGGATATCTTCGTATTATGAAATTGTCCGTCTCATATATAAAAAAGGACGACCAACTGTTCATATTTTACTTTTTCCCCTCTTTAAGGGAGGGTTTTGATAATATGATTTCTTACTCGTATAAGGCGCCAATGCTTTTATCTTTTACAGGAAATACAAGGGCCTGCAAGAACACCGCCTTGAGGCTCGATGGATTGAAGTTTGAACAATACAAACTTATGGTTGGACATTGTCTTCCAGATAATGTAAAGATTCATATGCAGAACTGTCTCGAGAAGATTGCAAATTTAGAAAACTGATTGTATTGTTGCCATTTATATGAAATCCACCATTTCAAGATAATTTTAATTAGATAATTCACTTGAATCCCACACATTGTTGTTCCGGTTGCACTCCCTGCCCCTTCGCATTTTTATTTCATTTGATCTTTTTGCAGTTTTTGATTGTTAGTTGTACGAGAGAAGTAGTTCAATGAGACAGTTACATGATTGGTGGGCTTGATGAATAATTTGTTGTTCACTTAA

mRNA sequence

CCCGCCCAAATATTTTCCTGCGAGCCTTTCACGATTTCTCACCTCTTTTGCTGCGATACTCTCCCTCTCACCACTGCCGTTCTACCGACGACGACACTTTCATCTCTGTCCCTCGTCCTTGTCTCTGTCCGTCGTTTCTATGTTCGTCGTCTCTGTTCGTCGTCGTCTCTACAAGGCAACTCCCCGTCGTCCACATGGGTTTCGCTTAGGGTTCTTCGTCTACCAGCTCGTCTCTTTACTGCTATTAGACACTTGGAAGCTAATGATTCGAGATCTTAAGTTCCACATCCTCTTCTGACCTTCGTTTGTTTCCGACGACCTCTGCTGACTATCTCTTTGCATCAACAACAAGGAGCGCTTGCAACTCAGCCTTCATTTCTTTATGACCCCTACATGAAATTATTGTACTATTGCCAATTTAGCTGCTGCAGGGTTACCACTGTCAATGCATAAGTCGTTACTGAAGTTAGAAGGTACAAAACAATGGTGAGGTTTAAAAACCGATACATGGTGTTTGAAGTTCTCTTGGATCCCAATAAAAACCTTAAAACAGATGATCCTATTATCATTACCCAATATAATGTTTCAAAAGCAATCAAGGATAGTATTCTTCTCAACTTCGGGGAATGTGGTTTTGCTTCCGCACTTGGATCTTTTCAAGTTAAGTATGTAAATCCAATCACGAAGTTATGTATTATTAGAGCCTCCAGAGAGGACTACCAGAATGTGTGGGCTGCAATTACTATGGTGAGGAGTATCAGCAATTGTCCCGTTGTATTCAATCTACTGGACCTAAGTGGAAATACAAGGGCCTGCAAGAACACCGCCTTGAGGCTCGATGGATTGAAGTTTGAACAATACAAACTTATGGTTGGACATTGTCTTCCAGATAATGTAAAGATTCATATGCAGAACTGTCTCGAGAAGATTGCAAATTTAGAAAACTGATTGTATTGTTGCCATTTATATGAAATCCACCATTTCAAGATAATTTTAATTAGATAATTCACTTGAATCCCACACATTGTTGTTCCGGTTGCACTCCCTGCCCCTTCGCATTTTTATTTCATTTGATCTTTTTGCAGTTTTTGATTGTTAGTTGTACGAGAGAAGTAGTTCAATGAGACAGTTACATGATTGGTGGGCTTGATGAATAATTTGTTGTTCACTTAA

Coding sequence (CDS)

ATGGTGAGGTTTAAAAACCGATACATGGTGTTTGAAGTTCTCTTGGATCCCAATAAAAACCTTAAAACAGATGATCCTATTATCATTACCCAATATAATGTTTCAAAAGCAATCAAGGATAGTATTCTTCTCAACTTCGGGGAATGTGGTTTTGCTTCCGCACTTGGATCTTTTCAAGTTAAGTATGTAAATCCAATCACGAAGTTATGTATTATTAGAGCCTCCAGAGAGGACTACCAGAATGTGTGGGCTGCAATTACTATGGTGAGGAGTATCAGCAATTGTCCCGTTGTATTCAATCTACTGGACCTAAGTGGAAATACAAGGGCCTGCAAGAACACCGCCTTGAGGCTCGATGGATTGAAGTTTGAACAATACAAACTTATGGTTGGACATTGTCTTCCAGATAATGTAAAGATTCATATGCAGAACTGTCTCGAGAAGATTGCAAATTTAGAAAACTGA

Protein sequence

MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVKIHMQNCLEKIANLEN

Homology

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BLAST of MELO3C023673 vs. NCBI nr
Match: XP_008461474.1 (PREDICTED: probable ribonuclease P/MRP protein subunit POP5 [Cucumis melo] >XP_008461476.1 PREDICTED: probable ribonuclease P/MRP protein subunit POP5 [Cucumis melo])

HSP 1 Score: 316.2 bits (809), Expect = 1.5e-82
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60
           MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV
Sbjct: 1   MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60

Query: 61  KYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120
           KYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG
Sbjct: 61  KYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120

Query: 121 LKFEQYKLMVGHCLPDNVKIHMQNCLEKIANLEN 155
           LKFEQYKLMVGHCLPDNVKIHMQNCLEKIANLEN
Sbjct: 121 LKFEQYKLMVGHCLPDNVKIHMQNCLEKIANLEN 154

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BLAST of MELO3C023673 vs. NCBI nr
Match: KAA0061295.1 (putative ribonuclease P/MRP protein subunit POP5 [Cucumis melo var. makuwa] >TYK09873.1 putative ribonuclease P/MRP protein subunit POP5 [Cucumis melo var. makuwa])

HSP 1 Score: 312.0 bits (798), Expect = 2.9e-81
Identity = 152/154 (98.70%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60
           MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV
Sbjct: 1   MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60

Query: 61  KYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120
           KYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG
Sbjct: 61  KYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120

Query: 121 LKFEQYKLMVGHCLPDNVKIHMQNCLEKIANLEN 155
           LKFEQYKLMVGHCLPDNVK+ MQNCLEKIANLEN
Sbjct: 121 LKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLEN 154

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BLAST of MELO3C023673 vs. NCBI nr
Match: XP_004139703.1 (probable ribonuclease P/MRP protein subunit POP5 [Cucumis sativus] >XP_011659093.1 probable ribonuclease P/MRP protein subunit POP5 [Cucumis sativus] >KGN44681.2 hypothetical protein Csa_016863 [Cucumis sativus])

HSP 1 Score: 299.3 bits (765), Expect = 1.9e-77
Identity = 146/154 (94.81%), Postives = 150/154 (97.40%), Query Frame = 0


Query: 1   MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60
           MVRFKNRYMVFEVLLDPNK+LKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV
Sbjct: 1   MVRFKNRYMVFEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60

Query: 61  KYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120
           KYVNPITK+CIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRL+G
Sbjct: 61  KYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLEG 120

Query: 121 LKFEQYKLMVGHCLPDNVKIHMQNCLEKIANLEN 155
           LKFEQYKLMVGH LPDNV + MQNCLEKIA LEN
Sbjct: 121 LKFEQYKLMVGHYLPDNVNLQMQNCLEKIATLEN 154

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BLAST of MELO3C023673 vs. NCBI nr
Match: XP_038899949.1 (probable ribonuclease P/MRP protein subunit POP5 [Benincasa hispida])

HSP 1 Score: 292.0 bits (746), Expect = 3.1e-75
Identity = 143/154 (92.86%), Postives = 148/154 (96.10%), Query Frame = 0


Query: 1   MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60
           MVRFKNRYMV EVLLDPNK+LKTDDPIIITQYNVSKAIKDSILLNFGECGFAS+LGSFQV
Sbjct: 1   MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQV 60

Query: 61  KYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120
           KYVNPITKLCIIRASREDYQNVWAAITMVR+ISNCPVVFNLLDLSGNTRACKNTALRLD 
Sbjct: 61  KYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFNLLDLSGNTRACKNTALRLDK 120

Query: 121 LKFEQYKLMVGHCLPDNVKIHMQNCLEKIANLEN 155
           LKFEQYKLMVGH LPDNV + MQNCLEKIA LE+
Sbjct: 121 LKFEQYKLMVGHRLPDNVNLQMQNCLEKIATLES 154

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BLAST of MELO3C023673 vs. NCBI nr
Match: XP_022932062.1 (probable ribonuclease P/MRP protein subunit POP5 [Cucurbita moschata] >KAG6607595.1 putative ribonuclease P/MRP protein subunit POP5, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037218.1 putative ribonuclease P/MRP protein subunit POP5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 272.7 bits (696), Expect = 1.9e-69
Identity = 132/154 (85.71%), Postives = 144/154 (93.51%), Query Frame = 0


Query: 1   MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60
           MV FKNRY+VFEV+LDPNK++ TDDPIIITQYNVSKAIKDSILLNFGECGFAS+LGSFQV
Sbjct: 1   MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQV 60

Query: 61  KYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120
           +YVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDL+GN+RACKNTALRLD 
Sbjct: 61  RYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLTGNSRACKNTALRLDE 120

Query: 121 LKFEQYKLMVGHCLPDNVKIHMQNCLEKIANLEN 155
           LKFEQYKLMVG  + D V + MQNCLEKI +L+N
Sbjct: 121 LKFEQYKLMVGPRISDGVNLQMQNCLEKIRSLDN 154

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BLAST of MELO3C023673 vs. ExPASy Swiss-Prot
Match: Q6AWV1 (Probable ribonuclease P/MRP protein subunit POP5 OS=Arabidopsis thaliana OX=3702 GN=EMB1687 PE=1 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 8.2e-47
Identity = 96/155 (61.94%), Postives = 118/155 (76.13%), Query Frame = 0


Query: 1   MVRFKNRYMVFEVLLDPNKNLKTD-DPIIITQYNVSKAIKDSILLNFGECGFASALGSFQ 60
           MV FKNRYM+ EV LDP+K+L  +  PII+TQ+N+SKAIKDSIL+NFGECG  S+LGSFQ
Sbjct: 1   MVGFKNRYMLMEVFLDPDKDLLGEGTPIILTQFNLSKAIKDSILVNFGECGLGSSLGSFQ 60

Query: 61  VKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLD 120
           VKYVNPITKLCI+R+SRE+++ VW AIT+V+SI NCPV+ NLLD+SG  RAC++TAL+ D
Sbjct: 61  VKYVNPITKLCIVRSSREEHRQVWLAITLVKSIGNCPVILNLLDISGCIRACRDTALKCD 120

Query: 121 GLKFEQYKLMVGHCLPDNVKIHMQNCLEKIANLEN 155
             KFEQ        L +     M   LEKI  LEN
Sbjct: 121 KEKFEQ----CSKSLSEEEIRQMNTSLEKIKLLEN 151

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BLAST of MELO3C023673 vs. ExPASy Swiss-Prot
Match: Q9UU90 (Ribonuclease P/MRP protein subunit POP5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC830.09c PE=3 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.8e-14
Identity = 45/134 (33.58%), Postives = 71/134 (52.99%), Query Frame = 0


Query: 1   MVRFKNRYMVFEVLLDPNKNLKTDDPII-----ITQYNVSKAIKDSILLNFGECGFASAL 60
           MVRFK+RY++FEVL    K    D P I     IT  ++SK I+  +  NFG+ G     
Sbjct: 1   MVRFKSRYLLFEVLYPEAKEF-FDYPTIPSDSSITTSSLSKIIRTMVAENFGDVGIGKVA 60

Query: 61  GSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTA 120
            S  VKY +P T   I+R SR+ ++  WAA+ ++R +   PV+  ++ +SG  +  +  A
Sbjct: 61  SSLTVKYFSPNTSTGILRVSRQHFRLAWAALVLIRELYGKPVIIRVVRVSGTIKKAELAA 120

Query: 121 LRLDGLKFEQYKLM 130
           +  +  +     LM
Sbjct: 121 IERNKSEIHNISLM 133

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BLAST of MELO3C023673 vs. ExPASy Swiss-Prot
Match: Q54EP3 (Probable ribonuclease P/MRP protein subunit POP5 OS=Dictyostelium discoideum OX=44689 GN=pop5 PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.3e-12
Identity = 38/126 (30.16%), Postives = 70/126 (55.56%), Query Frame = 0


Query: 1   MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60
           MVR KNRY++ EV+   N+         + Q+ +S  +K+ +    GE  + +   + ++
Sbjct: 1   MVRLKNRYLMTEVIWHDNEKSTQLSDSWLFQF-ISNEVKEKL----GELTYEAFKKTLKI 60

Query: 61  KYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120
            YVNP T + IIR S E Y+++W A+T++ S    P+ F ++ + G+ R C+  A+++ G
Sbjct: 61  IYVNPDTNIFIIRVSFEYYKSLWTALTLITSYYGVPIYFRMVHVGGSIRLCQKAAIKIFG 120

Query: 121 LKFEQY 127
            +   Y
Sbjct: 121 KQISVY 121

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BLAST of MELO3C023673 vs. ExPASy Swiss-Prot
Match: Q969H6 (Ribonuclease P/MRP protein subunit POP5 OS=Homo sapiens OX=9606 GN=POP5 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-11
Identity = 44/158 (27.85%), Postives = 79/158 (50.00%), Query Frame = 0


Query: 1   MVRFKNRYMVFEVLL-DPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQ 60
           MVRFK+RY++ E++  DP   L  DD ++      S  ++D+I    G  G A+    F 
Sbjct: 1   MVRFKHRYLLCELVSDDPRCRLSLDDRVL------SSLVRDTIARVHGTFGAAACSIGFA 60

Query: 61  VKYVNPITKLCIIRASREDYQNVWAAITMVRSISN----CPVVFNLLDLSGNTRACKNTA 120
           V+Y+N  T + ++R  +E YQ VW+A+  +  + N     P  FN L + G  R C+   
Sbjct: 61  VRYLNAYTGIVLLRCRKEFYQLVWSALPFITYLENKGHRYPCFFNTLHVGGTIRTCQKFL 120

Query: 121 LRLDGLKFEQYKLMVGHCLPDNVKIHMQNCLEKIANLE 154
           ++ +     Q  +++ +C  +  +  +Q  + +   LE
Sbjct: 121 IQYNR---RQLLILLQNCTDEGEREAIQKSVTRSCLLE 149

[Close]

BLAST of MELO3C023673 vs. ExPASy Swiss-Prot
Match: Q1JQ92 (Ribonuclease P/MRP protein subunit POP5 OS=Bos taurus OX=9913 GN=POP5 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.2e-10
Identity = 44/158 (27.85%), Postives = 79/158 (50.00%), Query Frame = 0


Query: 1   MVRFKNRYMVFEVLL-DPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQ 60
           MVRFK+RY++ EV+  DP   L  +D ++ T       ++D+I    G  G A+    F 
Sbjct: 1   MVRFKHRYLLCEVVSDDPRCRLTLEDRVLGT------LVRDTIARVHGTFGAAACSIGFA 60

Query: 61  VKYVNPITKLCIIRASREDYQNVWAAITMVRSISN----CPVVFNLLDLSGNTRACKNTA 120
           V+Y+N  T + ++R  +E Y+ VW+A+  + S+ N     P   N L + G  R C+   
Sbjct: 61  VRYLNAYTGIVLLRCRKEFYRLVWSALPFITSLENKGHRYPCFLNTLHVGGTIRTCQKFL 120

Query: 121 LRLDGLKFEQYKLMVGHCLPDNVKIHMQNCLEKIANLE 154
           ++ +     Q  +++ +C  +  +  +Q  + K   LE
Sbjct: 121 IQYNR---RQLLILLQNCTDEGEREAIQKSVTKSCLLE 149

[Close]

BLAST of MELO3C023673 vs. ExPASy TrEMBL
Match: A0A1S3CEI9 (Ribonuclease P OS=Cucumis melo OX=3656 GN=LOC103500063 PE=3 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 7.4e-83
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60
           MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV
Sbjct: 1   MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60

Query: 61  KYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120
           KYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG
Sbjct: 61  KYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120

Query: 121 LKFEQYKLMVGHCLPDNVKIHMQNCLEKIANLEN 155
           LKFEQYKLMVGHCLPDNVKIHMQNCLEKIANLEN
Sbjct: 121 LKFEQYKLMVGHCLPDNVKIHMQNCLEKIANLEN 154

[Close]

BLAST of MELO3C023673 vs. ExPASy TrEMBL
Match: A0A5D3CDD4 (Ribonuclease P OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00450 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.4e-81
Identity = 152/154 (98.70%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60
           MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV
Sbjct: 1   MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60

Query: 61  KYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120
           KYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG
Sbjct: 61  KYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120

Query: 121 LKFEQYKLMVGHCLPDNVKIHMQNCLEKIANLEN 155
           LKFEQYKLMVGHCLPDNVK+ MQNCLEKIANLEN
Sbjct: 121 LKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLEN 154

[Close]

BLAST of MELO3C023673 vs. ExPASy TrEMBL
Match: A0A0A0K7W3 (Ribonuclease P OS=Cucumis sativus OX=3659 GN=Csa_7G290500 PE=3 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 7.2e-70
Identity = 133/137 (97.08%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60
           MVRFKNRYMVFEVLLDPNK+LKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV
Sbjct: 1   MVRFKNRYMVFEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60

Query: 61  KYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120
           KYVNPITK+CIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRL+G
Sbjct: 61  KYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLEG 120

Query: 121 LKFEQYKLMVGHCLPDN 138
           LKFEQYKLMVGH LPDN
Sbjct: 121 LKFEQYKLMVGHYLPDN 137

[Close]

BLAST of MELO3C023673 vs. ExPASy TrEMBL
Match: A0A6J1EVL4 (Ribonuclease P OS=Cucurbita moschata OX=3662 GN=LOC111438386 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 9.4e-70
Identity = 132/154 (85.71%), Postives = 144/154 (93.51%), Query Frame = 0


Query: 1   MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60
           MV FKNRY+VFEV+LDPNK++ TDDPIIITQYNVSKAIKDSILLNFGECGFAS+LGSFQV
Sbjct: 1   MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQV 60

Query: 61  KYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120
           +YVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDL+GN+RACKNTALRLD 
Sbjct: 61  RYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLTGNSRACKNTALRLDE 120

Query: 121 LKFEQYKLMVGHCLPDNVKIHMQNCLEKIANLEN 155
           LKFEQYKLMVG  + D V + MQNCLEKI +L+N
Sbjct: 121 LKFEQYKLMVGPRISDGVNLQMQNCLEKIRSLDN 154

[Close]

BLAST of MELO3C023673 vs. ExPASy TrEMBL
Match: A0A6J1IBH7 (Ribonuclease P OS=Cucurbita maxima OX=3661 GN=LOC111471425 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.2e-69
Identity = 132/154 (85.71%), Postives = 143/154 (92.86%), Query Frame = 0


Query: 1   MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60
           MV FKNRY+VFEV+LDPNK++ TDDPIIITQYNVSKAIKDSILLNFGECGFAS+LGSFQV
Sbjct: 1   MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQV 60

Query: 61  KYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120
           KYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDL+GN+RACKNTALR+D 
Sbjct: 61  KYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLTGNSRACKNTALRVDE 120

Query: 121 LKFEQYKLMVGHCLPDNVKIHMQNCLEKIANLEN 155
           LKFEQYKLMVG  + D V + MQNCLEKI  L+N
Sbjct: 121 LKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLDN 154

[Close]

BLAST of MELO3C023673 vs. TAIR 10
Match: AT1G04635.1 (ribonuclease P family protein / Rpp14 family protein )

HSP 1 Score: 188.0 bits (476), Expect = 5.8e-48
Identity = 96/155 (61.94%), Postives = 118/155 (76.13%), Query Frame = 0


Query: 1   MVRFKNRYMVFEVLLDPNKNLKTD-DPIIITQYNVSKAIKDSILLNFGECGFASALGSFQ 60
           MV FKNRYM+ EV LDP+K+L  +  PII+TQ+N+SKAIKDSIL+NFGECG  S+LGSFQ
Sbjct: 1   MVGFKNRYMLMEVFLDPDKDLLGEGTPIILTQFNLSKAIKDSILVNFGECGLGSSLGSFQ 60

Query: 61  VKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLD 120
           VKYVNPITKLCI+R+SRE+++ VW AIT+V+SI NCPV+ NLLD+SG  RAC++TAL+ D
Sbjct: 61  VKYVNPITKLCIVRSSREEHRQVWLAITLVKSIGNCPVILNLLDISGCIRACRDTALKCD 120

Query: 121 GLKFEQYKLMVGHCLPDNVKIHMQNCLEKIANLEN 155
             KFEQ        L +     M   LEKI  LEN
Sbjct: 121 KEKFEQ----CSKSLSEEEIRQMNTSLEKIKLLEN 151

The following BLAST results are available for this feature:

BLAST of MELO3C023673 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461474.1	1.5e-82	100.00	PREDICTED: probable ribonuclease P/MRP protein subunit POP5 [Cucumis melo] >XP_0...	[more]
KAA0061295.1	2.9e-81	98.70	putative ribonuclease P/MRP protein subunit POP5 [Cucumis melo var. makuwa] >TYK...	[more]
XP_004139703.1	1.9e-77	94.81	probable ribonuclease P/MRP protein subunit POP5 [Cucumis sativus] >XP_011659093...	[more]
XP_038899949.1	3.1e-75	92.86	probable ribonuclease P/MRP protein subunit POP5 [Benincasa hispida]	[more]
XP_022932062.1	1.9e-69	85.71	probable ribonuclease P/MRP protein subunit POP5 [Cucurbita moschata] >KAG660759...	[more]

BLAST of MELO3C023673 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6AWV1	8.2e-47	61.94	Probable ribonuclease P/MRP protein subunit POP5 OS=Arabidopsis thaliana OX=3702...	[more]
Q9UU90	1.8e-14	33.58	Ribonuclease P/MRP protein subunit POP5 OS=Schizosaccharomyces pombe (strain 972...	[more]
Q54EP3	1.3e-12	30.16	Probable ribonuclease P/MRP protein subunit POP5 OS=Dictyostelium discoideum OX=...	[more]
Q969H6	1.9e-11	27.85	Ribonuclease P/MRP protein subunit POP5 OS=Homo sapiens OX=9606 GN=POP5 PE=1 SV=...	[more]
Q1JQ92	1.2e-10	27.85	Ribonuclease P/MRP protein subunit POP5 OS=Bos taurus OX=9913 GN=POP5 PE=2 SV=1	[more]

BLAST of MELO3C023673 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CEI9	7.4e-83	100.00	Ribonuclease P OS=Cucumis melo OX=3656 GN=LOC103500063 PE=3 SV=1	[more]
A0A5D3CDD4	1.4e-81	98.70	Ribonuclease P OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00450 ...	[more]
A0A0A0K7W3	7.2e-70	97.08	Ribonuclease P OS=Cucumis sativus OX=3659 GN=Csa_7G290500 PE=3 SV=1	[more]
A0A6J1EVL4	9.4e-70	85.71	Ribonuclease P OS=Cucurbita moschata OX=3662 GN=LOC111438386 PE=3 SV=1	[more]
A0A6J1IBH7	1.2e-69	85.71	Ribonuclease P OS=Cucurbita maxima OX=3661 GN=LOC111471425 PE=3 SV=1	[more]

BLAST of MELO3C023673 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04635.1	5.8e-48	61.94	ribonuclease P family protein / Rpp14 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002759	RNase P subunit Pop5/Rpp14/Rnp2-like	PFAM	PF01900	RNase_P_Rpp14	coord: 7..115 e-value: 1.4E-27 score: 95.9
IPR038085	RNase P subunit Pop5/Rpp14/Rnp2-like domain superfamily	GENE3D	3.30.70.3250	Ribonuclease P, Pop5 subunit	coord: 1..119 e-value: 3.4E-32 score: 112.9
IPR038085	RNase P subunit Pop5/Rpp14/Rnp2-like domain superfamily	SUPERFAMILY	160350	Rnp2-like	coord: 1..118
None	No IPR available	PANTHER	PTHR10993	OCTANOYLTRANSFERASE	coord: 1..132
None	No IPR available	PANTHER	PTHR10993:SF12	RIBONUCLEASE P/MRP PROTEIN SUBUNIT POP5	coord: 1..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C023673.1	MELO3C023673.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001682	tRNA 5'-leader removal
cellular_component	GO:0030677	ribonuclease P complex