MELO3C023655.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C023655.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr01: 7667357 .. 7667611 (+)
RNA-Seq ExpressionMELO3C023655.jh1
SyntenyMELO3C023655.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTACGAAGCAGCTGGGAAGGAGGCGCGACCCCTGAAAATGCACAGTTCAAAAAATCTGCGCCGCCGGAGGTTTGGGTCGAGTCTCGCCGCACCGTTTGTGGAAGAAGCTATCGCCGCCGCTAGTCGTGGGCGTTTGTGGTTCTGCTATCTGAAGAGAATGAGAATGAGGTGGCTATATCGCTCGCGGCTACAGAAGGTTCTGCCGCCGAGGTCGTCGCCGGAGATGATCAGGCTGGGGGTTGAGACGTGA

mRNA sequence

ATGTCGTACGAAGCAGCTGGGAAGGAGGCGCGACCCCTGAAAATGCACAGTTCAAAAAATCTGCGCCGCCGGAGGTTTGGGTCGAGTCTCGCCGCACCGTTTGTGGAAGAAGCTATCGCCGCCGCTAGTCGTGGGCGTTTGTGGTTCTGCTATCTGAAGAGAATGAGAATGAGGTGGCTATATCGCTCGCGGCTACAGAAGGTTCTGCCGCCGAGGTCGTCGCCGGAGATGATCAGGCTGGGGGTTGAGACGTGA

Coding sequence (CDS)

ATGTCGTACGAAGCAGCTGGGAAGGAGGCGCGACCCCTGAAAATGCACAGTTCAAAAAATCTGCGCCGCCGGAGGTTTGGGTCGAGTCTCGCCGCACCGTTTGTGGAAGAAGCTATCGCCGCCGCTAGTCGTGGGCGTTTGTGGTTCTGCTATCTGAAGAGAATGAGAATGAGGTGGCTATATCGCTCGCGGCTACAGAAGGTTCTGCCGCCGAGGTCGTCGCCGGAGATGATCAGGCTGGGGGTTGAGACGTGA

Protein sequence

MSYEAAGKEARPLKMHSSKNLRRRRFGSSLAAPFVEEAIAAASRGRLWFCYLKRMRMRWLYRSRLQKVLPPRSSPEMIRLGVET
Homology
[Close]
BLAST of MELO3C023655.jh1 vs. NCBI nr
Match: KAA0061259.1 (hypothetical protein E6C27_scaffold455G00970 [Cucumis melo var. makuwa] >TYK09839.1 hypothetical protein E5676_scaffold39G00030 [Cucumis melo var. makuwa])

HSP 1 Score: 164 bits (414), Expect = 9.96e-51
Identity = 83/84 (98.81%), Postives = 83/84 (98.81%), Query Frame = 0 

Query: 1  MSYEAAGKEARPLKMHSSKNLRRRRFGSSLAAPFVEEAIAAASRGRLWFCYLKRMRMRWL 60
          MSYEAAGKEARPLKMHSSKNLRRRRFGSSLAAPFVEEAIAAASRGRLWFCYLKRMR RWL
Sbjct: 1  MSYEAAGKEARPLKMHSSKNLRRRRFGSSLAAPFVEEAIAAASRGRLWFCYLKRMRKRWL 60

Query: 61 YRSRLQKVLPPRSSPEMIRLGVET 84
          YRSRLQKVLPPRSSPEMIRLGVET
Sbjct: 61 YRSRLQKVLPPRSSPEMIRLGVET 84

[Close]
BLAST of MELO3C023655.jh1 vs. NCBI nr
Match: KGN44434.1 (hypothetical protein Csa_015866 [Cucumis sativus])

HSP 1 Score: 123 bits (308), Expect = 1.48e-34
Identity = 67/84 (79.76%), Postives = 70/84 (83.33%), Query Frame = 0 

Query: 1  MSYEAAGKEARPLKMHSSKNLRRRRFGSSLAAPFVEEAIAAASRGRLWFCYLKRMRMRWL 60
          MSYEAAGKEARP KM SSKNLRRRR GSSL  PFVEEA AAASRG L FCY KRM M W+
Sbjct: 1  MSYEAAGKEARPTKMRSSKNLRRRRSGSSLGGPFVEEANAAASRGCLQFCYRKRMGMGWV 60

Query: 61 YRSRLQKVLPPRSSPEMIRLGVET 84
           RS L+KV+PPRSSPEMIRL VET
Sbjct: 61 NRSWLRKVVPPRSSPEMIRLRVET 84

[Close]
BLAST of MELO3C023655.jh1 vs. NCBI nr
Match: KAG6592238.1 (hypothetical protein SDJN03_14584, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 47.8 bits (112), Expect = 7.63e-05
Identity = 33/73 (45.21%), Postives = 44/73 (60.27%), Query Frame = 0 

Query: 12 PLKMHSSKNLRRRRFGSSLAAPFVEEAIAAASRG--RLWFCYLKRMRMRWLYRSRLQKVL 71
          P +  ++ ++  RR  SSLAAPF+E AIAAA  G  RL     +     W  RS  Q V+
Sbjct: 2  PSRSRTTVDIGGRRRQSSLAAPFLEGAIAAARLGCLRLVLAPEENGGTEWPDRSPRQMVV 61

Query: 72 PPRSSPEMIRLGV 82
          P RS+PE+IR+GV
Sbjct: 62 PSRSAPELIRVGV 74

[Close]
BLAST of MELO3C023655.jh1 vs. ExPASy TrEMBL
Match: A0A5A7V6D6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00030 PE=4 SV=1)

HSP 1 Score: 164 bits (414), Expect = 4.82e-51
Identity = 83/84 (98.81%), Postives = 83/84 (98.81%), Query Frame = 0 

Query: 1  MSYEAAGKEARPLKMHSSKNLRRRRFGSSLAAPFVEEAIAAASRGRLWFCYLKRMRMRWL 60
          MSYEAAGKEARPLKMHSSKNLRRRRFGSSLAAPFVEEAIAAASRGRLWFCYLKRMR RWL
Sbjct: 1  MSYEAAGKEARPLKMHSSKNLRRRRFGSSLAAPFVEEAIAAASRGRLWFCYLKRMRKRWL 60

Query: 61 YRSRLQKVLPPRSSPEMIRLGVET 84
          YRSRLQKVLPPRSSPEMIRLGVET
Sbjct: 61 YRSRLQKVLPPRSSPEMIRLGVET 84

[Close]
BLAST of MELO3C023655.jh1 vs. ExPASy TrEMBL
Match: A0A0A0K695 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G290570 PE=4 SV=1)

HSP 1 Score: 123 bits (308), Expect = 7.16e-35
Identity = 67/84 (79.76%), Postives = 70/84 (83.33%), Query Frame = 0 

Query: 1  MSYEAAGKEARPLKMHSSKNLRRRRFGSSLAAPFVEEAIAAASRGRLWFCYLKRMRMRWL 60
          MSYEAAGKEARP KM SSKNLRRRR GSSL  PFVEEA AAASRG L FCY KRM M W+
Sbjct: 1  MSYEAAGKEARPTKMRSSKNLRRRRSGSSLGGPFVEEANAAASRGCLQFCYRKRMGMGWV 60

Query: 61 YRSRLQKVLPPRSSPEMIRLGVET 84
           RS L+KV+PPRSSPEMIRL VET
Sbjct: 61 NRSWLRKVVPPRSSPEMIRLRVET 84

The following BLAST results are available for this feature:
BLAST of MELO3C023655.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0061259.19.96e-5198.81hypothetical protein E6C27_scaffold455G00970 [Cucumis melo var. makuwa] >TYK0983... [more]
KGN44434.11.48e-3479.76hypothetical protein Csa_015866 [Cucumis sativus][more]
KAG6592238.17.63e-0545.21hypothetical protein SDJN03_14584, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of MELO3C023655.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C023655.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V6D64.82e-5198.81Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0K6957.16e-3579.76Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G290570 PE=4 SV=1[more]
BLAST of MELO3C023655.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023655.jh1.t1MELO3C023655.jh1.t1mRNA