MELO3C023641 (gene) Melon (DHL92) v4

Overview
NameMELO3C023641
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr02: 19057986 .. 19058169 (-)
RNA-Seq ExpressionMELO3C023641
SyntenyMELO3C023641
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAGCGAAACACACAGTCGCAACAATGGAACCTCGAGCGGCAAGGAGGGAGATTTTAGGGGATTTAATGAGGGAGAACACTGAACGAAAGGGAAAAAGGGTTTCGCACGAACACGGGTTGAGGGGAAAGCCTGAACACGGGTTAAAGACGATAAGGCAGGGGAAGGTTTCGATCGTTTGA

mRNA sequence

ATGGCAAGCGAAACACACAGTCGCAACAATGGAACCTCGAGCGGCAAGGAGGGAGATTTTAGGGGATTTAATGAGGGAGAACACTGAACGAAAGGGAAAAAGGGTTTCGCACGAACACGGGTTGAGGGGAAAGCCTGAACACGGGTTAAAGACGATAAGGCAGGGGAAGGTTTCGATCGTTTGA

Coding sequence (CDS)

ATGGAACCTCGAGCGGCAAGGAGGGAGATTTTAGGGGATTTAATGAGGGAGAACACTGAACGAAAGGGAAAAAGGGTTTCGCACGAACACGGGTTGAGGGGAAAGCCTGAACACGGGTTAAAGACGATAAGGCAGGGGAAGGTTTCGATCGTTTGA

Protein sequence

MEPRAARREILGDLMRENTERKGKRVSHEHGLRGKPEHGLKTIRQGKVSIV
Homology
BLAST of MELO3C023641 vs. NCBI nr
Match: TYK04868.1 (hypothetical protein E5676_scaffold143G00590 [Cucumis melo var. makuwa])

HSP 1 Score: 59.3 bits (142), Expect = 1.1e-05
Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 0

Query: 22 KGKRVSHEHGLRGKPEHGLKTIRQGKVSIV 52
          KGKRVSHEHGLRGKPEHGLKT RQG+VS V
Sbjct: 31 KGKRVSHEHGLRGKPEHGLKTTRQGRVSAV 60

BLAST of MELO3C023641 vs. NCBI nr
Match: KAA0047776.1 (hypothetical protein E6C27_scaffold133G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 58.9 bits (141), Expect = 1.5e-05
Identity = 33/43 (76.74%), Postives = 34/43 (79.07%), Query Frame = 0

Query: 12 GDLMR--ENTER-KGKRVSHEHGLRGKPEHGLKTIRQGKVSIV 52
          GDL R  E   R KGKRVSHEHGLRGKPEH LKTIR G+VSIV
Sbjct: 18 GDLRRFDEGEHRTKGKRVSHEHGLRGKPEHRLKTIRHGRVSIV 60

BLAST of MELO3C023641 vs. NCBI nr
Match: TYK01078.1 (hypothetical protein E5676_scaffold264G00950 [Cucumis melo var. makuwa])

HSP 1 Score: 58.5 bits (140), Expect = 1.9e-05
Identity = 32/43 (74.42%), Postives = 34/43 (79.07%), Query Frame = 0

Query: 12 GDLMR--ENTER-KGKRVSHEHGLRGKPEHGLKTIRQGKVSIV 52
          GDL R  E   R KGKRVSHEHGLRGKPEH LKTIR G+VSI+
Sbjct: 18 GDLRRFDEGEHRTKGKRVSHEHGLRGKPEHRLKTIRHGRVSII 60

BLAST of MELO3C023641 vs. NCBI nr
Match: ADN33713.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 56.6 bits (135), Expect = 7.2e-05
Identity = 30/43 (69.77%), Postives = 32/43 (74.42%), Query Frame = 0

Query: 12 GDLM---RENTERKGKRVSHEHGLRGKPEHGLKTIRQGKVSIV 52
          GDL     E  + K KRVSHEHGLRGKPEHGLKTIRQG+V  V
Sbjct: 18 GDLRGFDEEEHKMKEKRVSHEHGLRGKPEHGLKTIRQGRVLTV 60

BLAST of MELO3C023641 vs. NCBI nr
Match: KAA0061239.1 (hypothetical protein E6C27_scaffold455G00740 [Cucumis melo var. makuwa] >TYJ99958.1 hypothetical protein E5676_scaffold5168G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 55.8 bits (133), Expect = 1.2e-04
Identity = 26/30 (86.67%), Postives = 27/30 (90.00%), Query Frame = 0

Query: 22 KGKRVSHEHGLRGKPEHGLKTIRQGKVSIV 52
          KGK VSHEHGLRGKPEHGLKTIRQ +VS V
Sbjct: 31 KGKSVSHEHGLRGKPEHGLKTIRQERVSAV 60

BLAST of MELO3C023641 vs. ExPASy TrEMBL
Match: A0A5D3C0R8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G00590 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.4e-06
Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 0

Query: 22 KGKRVSHEHGLRGKPEHGLKTIRQGKVSIV 52
          KGKRVSHEHGLRGKPEHGLKT RQG+VS V
Sbjct: 31 KGKRVSHEHGLRGKPEHGLKTTRQGRVSAV 60

BLAST of MELO3C023641 vs. ExPASy TrEMBL
Match: A0A5A7U0L7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00090 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 7.0e-06
Identity = 33/43 (76.74%), Postives = 34/43 (79.07%), Query Frame = 0

Query: 12 GDLMR--ENTER-KGKRVSHEHGLRGKPEHGLKTIRQGKVSIV 52
          GDL R  E   R KGKRVSHEHGLRGKPEH LKTIR G+VSIV
Sbjct: 18 GDLRRFDEGEHRTKGKRVSHEHGLRGKPEHRLKTIRHGRVSIV 60

BLAST of MELO3C023641 vs. ExPASy TrEMBL
Match: A0A5D3BPU2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G00950 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 9.2e-06
Identity = 32/43 (74.42%), Postives = 34/43 (79.07%), Query Frame = 0

Query: 12 GDLMR--ENTER-KGKRVSHEHGLRGKPEHGLKTIRQGKVSIV 52
          GDL R  E   R KGKRVSHEHGLRGKPEH LKTIR G+VSI+
Sbjct: 18 GDLRRFDEGEHRTKGKRVSHEHGLRGKPEHRLKTIRHGRVSII 60

BLAST of MELO3C023641 vs. ExPASy TrEMBL
Match: E5GB71 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.5e-05
Identity = 30/43 (69.77%), Postives = 32/43 (74.42%), Query Frame = 0

Query: 12 GDLM---RENTERKGKRVSHEHGLRGKPEHGLKTIRQGKVSIV 52
          GDL     E  + K KRVSHEHGLRGKPEHGLKTIRQG+V  V
Sbjct: 18 GDLRGFDEEEHKMKEKRVSHEHGLRGKPEHGLKTIRQGRVLTV 60

BLAST of MELO3C023641 vs. ExPASy TrEMBL
Match: A0A5A7V6A8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5168G00010 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 6.0e-05
Identity = 26/30 (86.67%), Postives = 27/30 (90.00%), Query Frame = 0

Query: 22 KGKRVSHEHGLRGKPEHGLKTIRQGKVSIV 52
          KGK VSHEHGLRGKPEHGLKTIRQ +VS V
Sbjct: 31 KGKSVSHEHGLRGKPEHGLKTIRQERVSAV 60

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK04868.11.1e-0590.00hypothetical protein E5676_scaffold143G00590 [Cucumis melo var. makuwa][more]
KAA0047776.11.5e-0576.74hypothetical protein E6C27_scaffold133G00090 [Cucumis melo var. makuwa][more]
TYK01078.11.9e-0574.42hypothetical protein E5676_scaffold264G00950 [Cucumis melo var. makuwa][more]
ADN33713.17.2e-0569.77hypothetical protein [Cucumis melo subsp. melo][more]
KAA0061239.11.2e-0486.67hypothetical protein E6C27_scaffold455G00740 [Cucumis melo var. makuwa] >TYJ9995... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3C0R85.4e-0690.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U0L77.0e-0676.74Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BPU29.2e-0674.42Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
E5GB713.5e-0569.77Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
A0A5A7V6A86.0e-0586.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023641.1MELO3C023641.1mRNA