MELO3C023623 (gene) Melon (DHL92) v4

Overview


Name	MELO3C023623
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	short-chain dehydrogenase reductase 3b-like
Location	chr01: 32228654 .. 32229425 (+)
RNA-Seq Expression	MELO3C023623
Synteny	MELO3C023623

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAAATTTTGCATCTCTTGGACTTTTTCATACATCTACAAAATATCTAGATATTTTTCTTAAGAACTTATTAATTCTCATGTGCAAAACTTAAACAATTTAAAAATCACTTTTAGTTTGAAGACGAGGATAATCTCAACAATGTCTAAACCAAGGTAACAATATTTTTTTTTCTTCTCTCTAAGCAATACAAATTTCTCTCTTTTATTATCGGTCGTTACTAACATCTGGATTTATTTACACACAATCTTTATAAGATCTTTTGGCTATGTACAAAATTCCTCTCACAGGCTGCATGGGAAGGTGGCTCTCATTACTGGAGCTGCCAGCGGCATTGGTGAGGAGACGGCGAGGCTGTTTGCAGCCAACGGTGCTTTCGTTGTCGTAGCTGACATCGATGACGAATTGGGCCAAAAAGTGGTAGACTCCATCGGTGTCAATCAAGCCAGCTTTCACCACTGCGACGTGAGAGATGAGAAGCAAGTCGAAGAAACAGTGAACTACACCATTGAAAAACACGGTAGGCTCGACATTCTGTTTAGCAATGCCGGGATCATAGGTTGTCTCACTTCTTCAATTCTAACGCTTGACATGTCCAAATTTGACAACATAATGGCAACCAATGTCCGTGGAGTATGTTATATATATTAACCCTGAAGTTTAACCTAATGGGGTTATAGCGTTTAATTTTTTTTCCTTCATTTGTAAAAAAGATGATTGCAACAATCAAGCACGCTGGACGAGTAATGATAGAGAGAAAGATACGAGAGTAA

mRNA sequence

TCAAATTTTGCATCTCTTGGACTTTTTCATACATCTACAAAATATCTAGATATTTTTCTTAAGAACTTATTAATTCTCATGTGCAAAACTTAAACAATTTAAAAATCACTTTTAGTTTGAAGACGAGGATAATCTCAACAATGTCTAAACCAAGGCTGCATGGGAAGGTGGCTCTCATTACTGGAGCTGCCAGCGGCATTGGTGAGGAGACGGCGAGGCTGTTTGCAGCCAACGGTGCTTTCGTTGTCGTAGCTGACATCGATGACGAATTGGGCCAAAAAGTGGTAGACTCCATCGGTGTCAATCAAGCCAGCTTTCACCACTGCGACGTGAGAGATGAGAAGCAAGTCGAAGAAACAGTGAACTACACCATTGAAAAACACGGTAGGCTCGACATTCTGTTTAGCAATGCCGGGATCATAGGTTGTCTCACTTCTTCAATTCTAACGCTTGACATGTCCAAATTTGACAACATAATGGCAACCAATGTCCGTGGAATGATTGCAACAATCAAGCACGCTGGACGAGTAATGATAGAGAGAAAGATACGAGAGTAA

Coding sequence (CDS)

ATGTCTAAACCAAGGCTGCATGGGAAGGTGGCTCTCATTACTGGAGCTGCCAGCGGCATTGGTGAGGAGACGGCGAGGCTGTTTGCAGCCAACGGTGCTTTCGTTGTCGTAGCTGACATCGATGACGAATTGGGCCAAAAAGTGGTAGACTCCATCGGTGTCAATCAAGCCAGCTTTCACCACTGCGACGTGAGAGATGAGAAGCAAGTCGAAGAAACAGTGAACTACACCATTGAAAAACACGGTAGGCTCGACATTCTGTTTAGCAATGCCGGGATCATAGGTTGTCTCACTTCTTCAATTCTAACGCTTGACATGTCCAAATTTGACAACATAATGGCAACCAATGTCCGTGGAATGATTGCAACAATCAAGCACGCTGGACGAGTAATGATAGAGAGAAAGATACGAGAGTAA

Protein sequence

MSKPRLHGKVALITGAASGIGEETARLFAANGAFVVVADIDDELGQKVVDSIGVNQASFHHCDVRDEKQVEETVNYTIEKHGRLDILFSNAGIIGCLTSSILTLDMSKFDNIMATNVRGMIATIKHAGRVMIERKIRE

Homology

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BLAST of MELO3C023623 vs. NCBI nr
Match: KAA0058548.1 (short-chain dehydrogenase reductase 3b-like isoform X2 [Cucumis melo var. makuwa] >TYK01625.1 short-chain dehydrogenase reductase 3b-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66
Identity = 135/137 (98.54%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MSKPRLHGKVALITGAASGIGEETARLFAANGAFVVVADIDDELGQKVVDSIGVNQASFH 60
           MSKPRLHGKVALITGAASGIGEETARLFAANGAFVVVADIDDELGQKVVD IGVNQASFH
Sbjct: 1   MSKPRLHGKVALITGAASGIGEETARLFAANGAFVVVADIDDELGQKVVDFIGVNQASFH 60

Query: 61  HCDVRDEKQVEETVNYTIEKHGRLDILFSNAGIIGCLTSSILTLDMSKFDNIMATNVRGM 120
           HCDVRDEKQVEET+NYTIEKHGRLDILFSNAGIIGCLTSSILTLDMSKFDNIMATNVRGM
Sbjct: 61  HCDVRDEKQVEETMNYTIEKHGRLDILFSNAGIIGCLTSSILTLDMSKFDNIMATNVRGM 120

Query: 121 IATIKHAGRVMIERKIR 138
           IATIKHAGRVMIERKIR
Sbjct: 121 IATIKHAGRVMIERKIR 137

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BLAST of MELO3C023623 vs. NCBI nr
Match: XP_031745294.1 (short-chain dehydrogenase reductase 3b isoform X2 [Cucumis sativus] >XP_031745295.1 short-chain dehydrogenase reductase 3b isoform X2 [Cucumis sativus])

HSP 1 Score: 246.1 bits (627), Expect = 1.7e-61
Identity = 125/137 (91.24%), Postives = 133/137 (97.08%), Query Frame = 0


Query: 1   MSKPRLHGKVALITGAASGIGEETARLFAANGAFVVVADIDDELGQKVVDSIGVNQASFH 60
           MSKPRLHGKVALITGAASGIGEETAR+FAANGAFVVVADIDDELGQKVV SIG+N ASFH
Sbjct: 1   MSKPRLHGKVALITGAASGIGEETARVFAANGAFVVVADIDDELGQKVVVSIGINHASFH 60

Query: 61  HCDVRDEKQVEETVNYTIEKHGRLDILFSNAGIIGCLTSSILTLDMSKFDNIMATNVRGM 120
           HCDVRDEKQVE+TVNYT+EKHGRLDILFSNAGIIG  TSSILTLDMS+FDNIMATNVRG+
Sbjct: 61  HCDVRDEKQVEKTVNYTVEKHGRLDILFSNAGIIGPRTSSILTLDMSEFDNIMATNVRGI 120

Query: 121 IATIKHAGRVMIERKIR 138
           +ATIKHAG+VMIERKIR
Sbjct: 121 VATIKHAGQVMIERKIR 137

[Close]

BLAST of MELO3C023623 vs. NCBI nr
Match: XP_004135972.2 (short-chain dehydrogenase reductase 3b isoform X1 [Cucumis sativus])

HSP 1 Score: 246.1 bits (627), Expect = 1.7e-61
Identity = 125/137 (91.24%), Postives = 133/137 (97.08%), Query Frame = 0


Query: 1   MSKPRLHGKVALITGAASGIGEETARLFAANGAFVVVADIDDELGQKVVDSIGVNQASFH 60
           MSKPRLHGKVALITGAASGIGEETAR+FAANGAFVVVADIDDELGQKVV SIG+N ASFH
Sbjct: 11  MSKPRLHGKVALITGAASGIGEETARVFAANGAFVVVADIDDELGQKVVVSIGINHASFH 70

Query: 61  HCDVRDEKQVEETVNYTIEKHGRLDILFSNAGIIGCLTSSILTLDMSKFDNIMATNVRGM 120
           HCDVRDEKQVE+TVNYT+EKHGRLDILFSNAGIIG  TSSILTLDMS+FDNIMATNVRG+
Sbjct: 71  HCDVRDEKQVEKTVNYTVEKHGRLDILFSNAGIIGPRTSSILTLDMSEFDNIMATNVRGI 130

Query: 121 IATIKHAGRVMIERKIR 138
           +ATIKHAG+VMIERKIR
Sbjct: 131 VATIKHAGQVMIERKIR 147

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BLAST of MELO3C023623 vs. NCBI nr
Match: KAE8646371.1 (hypothetical protein Csa_016127 [Cucumis sativus])

HSP 1 Score: 236.1 bits (601), Expect = 1.8e-58
Identity = 120/132 (90.91%), Postives = 128/132 (96.97%), Query Frame = 0


Query: 6   LHGKVALITGAASGIGEETARLFAANGAFVVVADIDDELGQKVVDSIGVNQASFHHCDVR 65
           LHGKVALITGAASGIGEETAR+FAANGAFVVVADIDDELGQKVV SIG+N ASFHHCDVR
Sbjct: 312 LHGKVALITGAASGIGEETARVFAANGAFVVVADIDDELGQKVVVSIGINHASFHHCDVR 371

Query: 66  DEKQVEETVNYTIEKHGRLDILFSNAGIIGCLTSSILTLDMSKFDNIMATNVRGMIATIK 125
           DEKQVE+TVNYT+EKHGRLDILFSNAGIIG  TSSILTLDMS+FDNIMATNVRG++ATIK
Sbjct: 372 DEKQVEKTVNYTVEKHGRLDILFSNAGIIGPRTSSILTLDMSEFDNIMATNVRGIVATIK 431

Query: 126 HAGRVMIERKIR 138
           HAG+VMIERKIR
Sbjct: 432 HAGQVMIERKIR 443

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BLAST of MELO3C023623 vs. NCBI nr
Match: XP_038897308.1 (short-chain dehydrogenase reductase 3b-like [Benincasa hispida])

HSP 1 Score: 230.3 bits (586), Expect = 9.9e-57
Identity = 118/138 (85.51%), Postives = 128/138 (92.75%), Query Frame = 0


Query: 1   MSKP-RLHGKVALITGAASGIGEETARLFAANGAFVVVADIDDELGQKVVDSIGVNQASF 60
           MSKP RLHGKVALITGAASGIG+ETARLF ANGAFVVVADIDD+LGQKVV SIG++QASF
Sbjct: 5   MSKPRRLHGKVALITGAASGIGKETARLFVANGAFVVVADIDDKLGQKVVASIGIDQASF 64

Query: 61  HHCDVRDEKQVEETVNYTIEKHGRLDILFSNAGIIGCLTSSILTLDMSKFDNIMATNVRG 120
           HHCDVRDEKQVEETVNYT+EKH RLDILFSNAGI   + SSILTLDMS FDN+MATNV G
Sbjct: 65  HHCDVRDEKQVEETVNYTVEKHSRLDILFSNAGITDPVISSILTLDMSNFDNVMATNVHG 124

Query: 121 MIATIKHAGRVMIERKIR 138
           ++ATIKHAGRVM+ERKIR
Sbjct: 125 VVATIKHAGRVMVERKIR 142

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BLAST of MELO3C023623 vs. ExPASy Swiss-Prot
Match: O80714 (Short-chain dehydrogenase reductase 3c OS=Arabidopsis thaliana OX=3702 GN=SDR3c PE=3 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 8.4e-35
Identity = 75/137 (54.74%), Postives = 98/137 (71.53%), Query Frame = 0


Query: 1   MSKPRLHGKVALITGAASGIGEETARLFAANGAFVVVADIDDELGQKVVDSIGVNQASFH 60
           MS  RL GK+ +ITG ASGIG + ARLF  +GA VV+ D+ +ELGQ V   IG ++ASF+
Sbjct: 1   MSGLRLEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFY 60

Query: 61  HCDVRDEKQVEETVNYTIEKHGRLDILFSNAGIIGCLTSSILTLDMSKFDNIMATNVRGM 120
            CDV +E +VE+ V +T+EKHG+LD+LFSNAG++  L  S L  D+ +FD IMA NVRG 
Sbjct: 61  RCDVTNETEVEDAVKFTVEKHGKLDVLFSNAGVLEPL-ESFLDFDLERFDRIMAVNVRGA 120

Query: 121 IATIKHAGRVMIERKIR 138
            A IKHA R M+E+  R
Sbjct: 121 AAFIKHAARAMVEKGTR 136

[Close]

BLAST of MELO3C023623 vs. ExPASy Swiss-Prot
Match: F4J300 (Short-chain dehydrogenase reductase 5 OS=Arabidopsis thaliana OX=3702 GN=SDR5 PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.4e-34
Identity = 75/132 (56.82%), Postives = 95/132 (71.97%), Query Frame = 0


Query: 1   MSKPRLHGKVALITGAASGIGEETARLFAANGAFVVVADIDDELGQKVVDSIGVNQASFH 60
           MS  RL GK+ +ITG ASGIG E ARLF  +GA VV+ D+ +ELGQ V  SIG+++ASF+
Sbjct: 1   MSGQRLDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKASFY 60

Query: 61  HCDVRDEKQVEETVNYTIEKHGRLDILFSNAGIIGCLTSSILTLDMSKFDNIMATNVRGM 120
            CD+ DE +VE  V +T+EKHG+LD+LFSNAG++     SIL LD+  FD  MA NVRG 
Sbjct: 61  RCDITDETEVENAVKFTVEKHGKLDVLFSNAGVME-PHGSILDLDLEAFDRTMAVNVRGA 120

Query: 121 IATIKHAGRVMI 133
            A IKHA R M+
Sbjct: 121 AAFIKHAARSMV 131

[Close]

BLAST of MELO3C023623 vs. ExPASy Swiss-Prot
Match: Q94K41 (Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana OX=3702 GN=SDR3b PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.5e-34
Identity = 74/137 (54.01%), Postives = 100/137 (72.99%), Query Frame = 0


Query: 1   MSKPRLHGKVALITGAASGIGEETARLFAANGAFVVVADIDDELGQKVVDSIGVNQASFH 60
           MS  RL GK+ +ITG ASGIG E+ RLF  +GA VV+ D+ DELGQ V  SIG ++AS++
Sbjct: 1   MSGKRLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYY 60

Query: 61  HCDVRDEKQVEETVNYTIEKHGRLDILFSNAGIIGCLTSSILTLDMSKFDNIMATNVRGM 120
           HCDV +E +VE  V +T+EK+G+LD+LFSNAG+I     SIL L++++ D  +A N+RG 
Sbjct: 61  HCDVTNETEVENAVKFTVEKYGKLDVLFSNAGVIEPFV-SILDLNLNELDRTIAINLRGT 120

Query: 121 IATIKHAGRVMIERKIR 138
            A IKHA R M+E+ IR
Sbjct: 121 AAFIKHAARAMVEKGIR 136

[Close]

BLAST of MELO3C023623 vs. ExPASy Swiss-Prot
Match: O80713 (Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana OX=3702 GN=SDR3a PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.2e-33
Identity = 74/137 (54.01%), Postives = 97/137 (70.80%), Query Frame = 0


Query: 1   MSKPRLHGKVALITGAASGIGEETARLFAANGAFVVVADIDDELGQKVVDSIGVNQASFH 60
           MS  RL GK+A+ITG ASGIG E  RLF  +GA VV+ D  +ELGQ V  S+G ++ASF+
Sbjct: 1   MSGLRLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFY 60

Query: 61  HCDVRDEKQVEETVNYTIEKHGRLDILFSNAGIIGCLTSSILTLDMSKFDNIMATNVRGM 120
            CDV +EK+VE  V +T+EK+G+LD+LFSNAG++     S L L++ +FD  MA NVRG 
Sbjct: 61  RCDVTNEKEVENAVKFTVEKYGKLDVLFSNAGVME-QPGSFLDLNLEQFDRTMAVNVRGA 120

Query: 121 IATIKHAGRVMIERKIR 138
            A IKHA R M+E+  R
Sbjct: 121 AAFIKHAARAMVEKGTR 136

[Close]

BLAST of MELO3C023623 vs. ExPASy Swiss-Prot
Match: F4J2Z7 (Short-chain dehydrogenase reductase 4 OS=Arabidopsis thaliana OX=3702 GN=SDR4 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 6.0e-33
Identity = 71/127 (55.91%), Postives = 91/127 (71.65%), Query Frame = 0


Query: 6   LHGKVALITGAASGIGEETARLFAANGAFVVVADIDDELGQKVVDSIGVNQASFHHCDVR 65
           L GK+A+ITG ASGIG E  RLF  +GA VV+ DI +ELGQ +  SIG+++ASF+ C+V 
Sbjct: 44  LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFYRCNVT 103

Query: 66  DEKQVEETVNYTIEKHGRLDILFSNAGIIGCLTSSILTLDMSKFDNIMATNVRGMIATIK 125
           DE  VE  V +T+EKHG+LD+LFSNAG++     S+L LD+  FD  MA NVRG  A IK
Sbjct: 104 DETDVENAVKFTVEKHGKLDVLFSNAGVLEAF-GSVLDLDLEAFDRTMAVNVRGAAAFIK 163

Query: 126 HAGRVMI 133
           HA R M+
Sbjct: 164 HAARSMV 169

[Close]

BLAST of MELO3C023623 vs. ExPASy TrEMBL
Match: A0A5D3BR09 (Short-chain dehydrogenase reductase 3b-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3840G00020 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.1e-67
Identity = 135/137 (98.54%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MSKPRLHGKVALITGAASGIGEETARLFAANGAFVVVADIDDELGQKVVDSIGVNQASFH 60
           MSKPRLHGKVALITGAASGIGEETARLFAANGAFVVVADIDDELGQKVVD IGVNQASFH
Sbjct: 1   MSKPRLHGKVALITGAASGIGEETARLFAANGAFVVVADIDDELGQKVVDFIGVNQASFH 60

Query: 61  HCDVRDEKQVEETVNYTIEKHGRLDILFSNAGIIGCLTSSILTLDMSKFDNIMATNVRGM 120
           HCDVRDEKQVEET+NYTIEKHGRLDILFSNAGIIGCLTSSILTLDMSKFDNIMATNVRGM
Sbjct: 61  HCDVRDEKQVEETMNYTIEKHGRLDILFSNAGIIGCLTSSILTLDMSKFDNIMATNVRGM 120

Query: 121 IATIKHAGRVMIERKIR 138
           IATIKHAGRVMIERKIR
Sbjct: 121 IATIKHAGRVMIERKIR 137

[Close]

BLAST of MELO3C023623 vs. ExPASy TrEMBL
Match: A0A0A0K5W0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G414470 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 8.4e-62
Identity = 125/137 (91.24%), Postives = 133/137 (97.08%), Query Frame = 0


Query: 1   MSKPRLHGKVALITGAASGIGEETARLFAANGAFVVVADIDDELGQKVVDSIGVNQASFH 60
           MSKPRLHGKVALITGAASGIGEETAR+FAANGAFVVVADIDDELGQKVV SIG+N ASFH
Sbjct: 1   MSKPRLHGKVALITGAASGIGEETARVFAANGAFVVVADIDDELGQKVVVSIGINHASFH 60

Query: 61  HCDVRDEKQVEETVNYTIEKHGRLDILFSNAGIIGCLTSSILTLDMSKFDNIMATNVRGM 120
           HCDVRDEKQVE+TVNYT+EKHGRLDILFSNAGIIG  TSSILTLDMS+FDNIMATNVRG+
Sbjct: 61  HCDVRDEKQVEKTVNYTVEKHGRLDILFSNAGIIGPRTSSILTLDMSEFDNIMATNVRGI 120

Query: 121 IATIKHAGRVMIERKIR 138
           +ATIKHAG+VMIERKIR
Sbjct: 121 VATIKHAGQVMIERKIR 137

[Close]

BLAST of MELO3C023623 vs. ExPASy TrEMBL
Match: A0A6J1GPZ8 (short-chain dehydrogenase reductase 3b-like OS=Cucurbita moschata OX=3662 GN=LOC111456415 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 7.9e-52
Identity = 110/138 (79.71%), Postives = 125/138 (90.58%), Query Frame = 0


Query: 1   MSKP-RLHGKVALITGAASGIGEETARLFAANGAFVVVADIDDELGQKVVDSIGVNQASF 60
           MSKP RLHGKVALITGAASGIGEETARLFAANGAFVVVADID+ELG+KV  SIG++QASF
Sbjct: 1   MSKPRRLHGKVALITGAASGIGEETARLFAANGAFVVVADIDNELGRKVAASIGIDQASF 60

Query: 61  HHCDVRDEKQVEETVNYTIEKHGRLDILFSNAGIIGCLTSSILTLDMSKFDNIMATNVRG 120
           HHCDVRDEKQVEE V+YT+EKHGRLDILFSNAGI+G L +SIL+LD+S FD+I ATNVRG
Sbjct: 61  HHCDVRDEKQVEEMVSYTVEKHGRLDILFSNAGIMGSL-ASILSLDISDFDDIFATNVRG 120

Query: 121 MIATIKHAGRVMIERKIR 138
           ++ TIKH  R M+E+ IR
Sbjct: 121 VVGTIKHGARAMVEKNIR 137

[Close]

BLAST of MELO3C023623 vs. ExPASy TrEMBL
Match: A0A6J1JWS9 (short-chain dehydrogenase reductase 3b-like OS=Cucurbita maxima OX=3661 GN=LOC111488170 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.8e-51
Identity = 109/138 (78.99%), Postives = 125/138 (90.58%), Query Frame = 0


Query: 1   MSKP-RLHGKVALITGAASGIGEETARLFAANGAFVVVADIDDELGQKVVDSIGVNQASF 60
           MSKP RLHGKVALITGAASGIGEETARLFAANGAFVVVADID+ELG+KV  SIG++QASF
Sbjct: 1   MSKPRRLHGKVALITGAASGIGEETARLFAANGAFVVVADIDNELGRKVAASIGIDQASF 60

Query: 61  HHCDVRDEKQVEETVNYTIEKHGRLDILFSNAGIIGCLTSSILTLDMSKFDNIMATNVRG 120
           HHCDVRDEKQVEE V++T+EKHGRLDILFSNAGI+G L +SIL+LD+S FD+I ATNVRG
Sbjct: 61  HHCDVRDEKQVEEMVSHTVEKHGRLDILFSNAGIVGSL-ASILSLDISDFDDIFATNVRG 120

Query: 121 MIATIKHAGRVMIERKIR 138
           ++ TIKH  R M+E+ IR
Sbjct: 121 VVGTIKHGARAMVEKNIR 137

[Close]

BLAST of MELO3C023623 vs. ExPASy TrEMBL
Match: A0A6J1GRA5 (short-chain dehydrogenase reductase 3b-like OS=Cucurbita moschata OX=3662 GN=LOC111456317 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 3.0e-51
Identity = 109/138 (78.99%), Postives = 124/138 (89.86%), Query Frame = 0


Query: 1   MSKP-RLHGKVALITGAASGIGEETARLFAANGAFVVVADIDDELGQKVVDSIGVNQASF 60
           MSKP RLHGKVALITGAASGIGEETARLF ANGAFVVVADIDDELG+KV  SIG++QASF
Sbjct: 1   MSKPRRLHGKVALITGAASGIGEETARLFVANGAFVVVADIDDELGRKVAASIGIDQASF 60

Query: 61  HHCDVRDEKQVEETVNYTIEKHGRLDILFSNAGIIGCLTSSILTLDMSKFDNIMATNVRG 120
           HHCDVRDEKQVEETV+YT+EK+G LDILFSNAGI+G L +SIL+LD+S FDN  ATNVRG
Sbjct: 61  HHCDVRDEKQVEETVSYTVEKYGGLDILFSNAGIMGSL-ASILSLDISDFDNTFATNVRG 120

Query: 121 MIATIKHAGRVMIERKIR 138
           ++ TIKH+ R M+E+ IR
Sbjct: 121 VVGTIKHSARAMVEKNIR 137

[Close]

BLAST of MELO3C023623 vs. TAIR 10
Match: AT2G47120.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 147.9 bits (372), Expect = 6.0e-36
Identity = 75/137 (54.74%), Postives = 98/137 (71.53%), Query Frame = 0


Query: 1   MSKPRLHGKVALITGAASGIGEETARLFAANGAFVVVADIDDELGQKVVDSIGVNQASFH 60
           MS  RL GK+ +ITG ASGIG + ARLF  +GA VV+ D+ +ELGQ V   IG ++ASF+
Sbjct: 1   MSGLRLEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFY 60

Query: 61  HCDVRDEKQVEETVNYTIEKHGRLDILFSNAGIIGCLTSSILTLDMSKFDNIMATNVRGM 120
            CDV +E +VE+ V +T+EKHG+LD+LFSNAG++  L  S L  D+ +FD IMA NVRG 
Sbjct: 61  RCDVTNETEVEDAVKFTVEKHGKLDVLFSNAGVLEPL-ESFLDFDLERFDRIMAVNVRGA 120

Query: 121 IATIKHAGRVMIERKIR 138
            A IKHA R M+E+  R
Sbjct: 121 AAFIKHAARAMVEKGTR 136

[Close]

BLAST of MELO3C023623 vs. TAIR 10
Match: AT3G29260.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 147.1 bits (370), Expect = 1.0e-35
Identity = 75/132 (56.82%), Postives = 95/132 (71.97%), Query Frame = 0


Query: 1   MSKPRLHGKVALITGAASGIGEETARLFAANGAFVVVADIDDELGQKVVDSIGVNQASFH 60
           MS  RL GK+ +ITG ASGIG E ARLF  +GA VV+ D+ +ELGQ V  SIG+++ASF+
Sbjct: 1   MSGQRLDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKASFY 60

Query: 61  HCDVRDEKQVEETVNYTIEKHGRLDILFSNAGIIGCLTSSILTLDMSKFDNIMATNVRGM 120
            CD+ DE +VE  V +T+EKHG+LD+LFSNAG++     SIL LD+  FD  MA NVRG 
Sbjct: 61  RCDITDETEVENAVKFTVEKHGKLDVLFSNAGVME-PHGSILDLDLEAFDRTMAVNVRGA 120

Query: 121 IATIKHAGRVMI 133
            A IKHA R M+
Sbjct: 121 AAFIKHAARSMV 131

[Close]

BLAST of MELO3C023623 vs. TAIR 10
Match: AT2G47140.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 146.4 bits (368), Expect = 1.7e-35
Identity = 74/137 (54.01%), Postives = 100/137 (72.99%), Query Frame = 0


Query: 1   MSKPRLHGKVALITGAASGIGEETARLFAANGAFVVVADIDDELGQKVVDSIGVNQASFH 60
           MS  RL GK+ +ITG ASGIG E+ RLF  +GA VV+ D+ DELGQ V  SIG ++AS++
Sbjct: 1   MSGKRLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYY 60

Query: 61  HCDVRDEKQVEETVNYTIEKHGRLDILFSNAGIIGCLTSSILTLDMSKFDNIMATNVRGM 120
           HCDV +E +VE  V +T+EK+G+LD+LFSNAG+I     SIL L++++ D  +A N+RG 
Sbjct: 61  HCDVTNETEVENAVKFTVEKYGKLDVLFSNAGVIEPFV-SILDLNLNELDRTIAINLRGT 120

Query: 121 IATIKHAGRVMIERKIR 138
            A IKHA R M+E+ IR
Sbjct: 121 AAFIKHAARAMVEKGIR 136

[Close]

BLAST of MELO3C023623 vs. TAIR 10
Match: AT3G29250.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 145.6 bits (366), Expect = 3.0e-35
Identity = 74/132 (56.06%), Postives = 94/132 (71.21%), Query Frame = 0


Query: 1   MSKPRLHGKVALITGAASGIGEETARLFAANGAFVVVADIDDELGQKVVDSIGVNQASFH 60
           MS  RL GK+A+ITG ASGIG E  RLF  +GA VV+ DI +ELGQ +  SIG+++ASF+
Sbjct: 1   MSGLRLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFY 60

Query: 61  HCDVRDEKQVEETVNYTIEKHGRLDILFSNAGIIGCLTSSILTLDMSKFDNIMATNVRGM 120
            C+V DE  VE  V +T+EKHG+LD+LFSNAG++     S+L LD+  FD  MA NVRG 
Sbjct: 61  RCNVTDETDVENAVKFTVEKHGKLDVLFSNAGVLEAF-GSVLDLDLEAFDRTMAVNVRGA 120

Query: 121 IATIKHAGRVMI 133
            A IKHA R M+
Sbjct: 121 AAFIKHAARSMV 131

[Close]

BLAST of MELO3C023623 vs. TAIR 10
Match: AT2G47130.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 144.1 bits (362), Expect = 8.7e-35
Identity = 74/137 (54.01%), Postives = 97/137 (70.80%), Query Frame = 0


Query: 1   MSKPRLHGKVALITGAASGIGEETARLFAANGAFVVVADIDDELGQKVVDSIGVNQASFH 60
           MS  RL GK+A+ITG ASGIG E  RLF  +GA VV+ D  +ELGQ V  S+G ++ASF+
Sbjct: 1   MSGLRLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFY 60

Query: 61  HCDVRDEKQVEETVNYTIEKHGRLDILFSNAGIIGCLTSSILTLDMSKFDNIMATNVRGM 120
            CDV +EK+VE  V +T+EK+G+LD+LFSNAG++     S L L++ +FD  MA NVRG 
Sbjct: 61  RCDVTNEKEVENAVKFTVEKYGKLDVLFSNAGVME-QPGSFLDLNLEQFDRTMAVNVRGA 120

Query: 121 IATIKHAGRVMIERKIR 138
            A IKHA R M+E+  R
Sbjct: 121 AAFIKHAARAMVEKGTR 136

The following BLAST results are available for this feature:

BLAST of MELO3C023623 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0058548.1	1.1e-66	98.54	short-chain dehydrogenase reductase 3b-like isoform X2 [Cucumis melo var. makuwa...	[more]
XP_031745294.1	1.7e-61	91.24	short-chain dehydrogenase reductase 3b isoform X2 [Cucumis sativus] >XP_03174529...	[more]
XP_004135972.2	1.7e-61	91.24	short-chain dehydrogenase reductase 3b isoform X1 [Cucumis sativus]	[more]
KAE8646371.1	1.8e-58	90.91	hypothetical protein Csa_016127 [Cucumis sativus]	[more]
XP_038897308.1	9.9e-57	85.51	short-chain dehydrogenase reductase 3b-like [Benincasa hispida]	[more]

BLAST of MELO3C023623 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80714	8.4e-35	54.74	Short-chain dehydrogenase reductase 3c OS=Arabidopsis thaliana OX=3702 GN=SDR3c ...	[more]
F4J300	1.4e-34	56.82	Short-chain dehydrogenase reductase 5 OS=Arabidopsis thaliana OX=3702 GN=SDR5 PE...	[more]
Q94K41	2.5e-34	54.01	Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana OX=3702 GN=SDR3b ...	[more]
O80713	1.2e-33	54.01	Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana OX=3702 GN=SDR3a ...	[more]
F4J2Z7	6.0e-33	55.91	Short-chain dehydrogenase reductase 4 OS=Arabidopsis thaliana OX=3702 GN=SDR4 PE...	[more]

BLAST of MELO3C023623 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BR09	5.1e-67	98.54	Short-chain dehydrogenase reductase 3b-like isoform X2 OS=Cucumis melo var. maku...	[more]
A0A0A0K5W0	8.4e-62	91.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G414470 PE=4 SV=1	[more]
A0A6J1GPZ8	7.9e-52	79.71	short-chain dehydrogenase reductase 3b-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1JWS9	1.8e-51	78.99	short-chain dehydrogenase reductase 3b-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1GRA5	3.0e-51	78.99	short-chain dehydrogenase reductase 3b-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of MELO3C023623 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47120.1	6.0e-36	54.74	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G29260.1	1.0e-35	56.82	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT2G47140.1	1.7e-35	54.01	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G29250.2	3.0e-35	56.06	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT2G47130.1	8.7e-35	54.01	NAD(P)-binding Rossmann-fold superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 10..27 score: 50.73 coord: 82..93 score: 57.06
None	No IPR available	PFAM	PF13561	adh_short_C2	coord: 15..133 e-value: 4.8E-30 score: 104.8
None	No IPR available	GENE3D	3.40.50.720		coord: 1..137 e-value: 4.6E-40 score: 139.4
None	No IPR available	PANTHER	PTHR42820:SF16	SHORT-CHAIN DEHYDROGENASE REDUCTASE 3B	coord: 1..137
None	No IPR available	PANTHER	PTHR42820	SHORT-CHAIN DEHYDROGENASE REDUCTASE	coord: 1..137
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 3..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C023623.1	MELO3C023623.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016491	oxidoreductase activity